View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0304-Insertion-2 (Length: 978)

Name: NF0304-Insertion-2
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0304-Insertion-2
NF0304-Insertion-2
[»] chr1 (25 HSPs)
chr1 (8-978)||(31162126-31163109)
chr1 (239-361)||(1138572-1138694)
chr1 (239-356)||(1486418-1486533)
chr1 (157-356)||(4621237-4621436)
chr1 (157-356)||(32729543-32729741)
chr1 (157-361)||(24122016-24122220)
chr1 (157-361)||(24674386-24674590)
chr1 (157-356)||(15059402-15059601)
chr1 (239-340)||(19034468-19034569)
chr1 (157-356)||(30677174-30677373)
chr1 (213-336)||(37047010-37047133)
chr1 (157-361)||(7766727-7766931)
chr1 (239-348)||(25237071-25237180)
chr1 (186-361)||(7946837-7947011)
chr1 (268-356)||(24216976-24217064)
chr1 (264-356)||(29057444-29057536)
chr1 (157-343)||(7578420-7578606)
chr1 (268-355)||(46113513-46113600)
chr1 (227-357)||(17447271-17447401)
chr1 (162-355)||(18646852-18647045)
chr1 (253-361)||(88378-88486)
chr1 (230-361)||(8077640-8077771)
chr1 (157-292)||(9500355-9500490)
chr1 (318-356)||(47091688-47091726)
chr1 (229-326)||(20999235-20999332)
[»] chr5 (18 HSPs)
chr5 (157-356)||(19145412-19145610)
chr5 (157-362)||(32059440-32059645)
chr5 (157-361)||(27498731-27498935)
chr5 (157-361)||(11926501-11926706)
chr5 (157-356)||(8484661-8484860)
chr5 (157-362)||(15641106-15641310)
chr5 (234-356)||(36895423-36895545)
chr5 (268-361)||(1827641-1827734)
chr5 (264-361)||(13038561-13038658)
chr5 (157-353)||(38684209-38684404)
chr5 (157-284)||(19456211-19456337)
chr5 (157-204)||(7085626-7085673)
chr5 (157-208)||(10837442-10837493)
chr5 (157-208)||(24158166-24158217)
chr5 (157-208)||(33737888-33737938)
chr5 (157-243)||(35425124-35425210)
chr5 (318-360)||(42006787-42006829)
chr5 (318-355)||(3715070-3715107)
[»] chr8 (28 HSPs)
chr8 (157-356)||(3734623-3734822)
chr8 (157-356)||(34237655-34237854)
chr8 (157-361)||(4718642-4718846)
chr8 (234-365)||(11956133-11956264)
chr8 (157-362)||(20305904-20306109)
chr8 (157-362)||(21092537-21092742)
chr8 (158-355)||(28193477-28193674)
chr8 (225-365)||(24339691-24339832)
chr8 (158-356)||(15259407-15259605)
chr8 (234-356)||(34639284-34639405)
chr8 (157-306)||(18128565-18128714)
chr8 (157-356)||(2618188-2618387)
chr8 (157-292)||(8765526-8765661)
chr8 (157-356)||(39349258-39349457)
chr8 (222-356)||(27746400-27746534)
chr8 (234-356)||(22200637-22200758)
chr8 (240-356)||(34694659-34694775)
chr8 (269-348)||(11714931-11715010)
chr8 (157-246)||(2639411-2639500)
chr8 (222-362)||(3403567-3403707)
chr8 (157-245)||(10292167-10292255)
chr8 (157-245)||(21603343-21603431)
chr8 (268-356)||(28964035-28964123)
chr8 (157-292)||(32879345-32879480)
chr8 (250-356)||(8387537-8387643)
chr8 (287-349)||(33585757-33585819)
chr8 (157-203)||(33747037-33747083)
chr8 (234-352)||(41070767-41070885)
[»] chr4 (20 HSPs)
chr4 (157-356)||(40058852-40059051)
chr4 (157-356)||(34844758-34844957)
chr4 (158-356)||(52983617-52983815)
chr4 (231-357)||(41085023-41085149)
chr4 (157-361)||(33696279-33696483)
chr4 (157-352)||(27528795-27528990)
chr4 (157-356)||(32986195-32986394)
chr4 (157-292)||(34723861-34723996)
chr4 (234-343)||(12710190-12710299)
chr4 (222-356)||(33992624-33992758)
chr4 (157-365)||(5609202-5609410)
chr4 (234-355)||(9646293-9646414)
chr4 (157-356)||(25852212-25852412)
chr4 (157-356)||(46714390-46714590)
chr4 (318-364)||(43719226-43719272)
chr4 (241-361)||(41621680-41621800)
chr4 (157-356)||(54127342-54127541)
chr4 (261-340)||(7093390-7093469)
chr4 (251-284)||(16339715-16339748)
chr4 (157-361)||(18875517-18875720)
[»] chr3 (42 HSPs)
chr3 (157-356)||(8456150-8456349)
chr3 (157-356)||(30257622-30257821)
chr3 (157-361)||(35492904-35493108)
chr3 (157-361)||(49258262-49258466)
chr3 (157-356)||(40133449-40133648)
chr3 (157-356)||(45529755-45529953)
chr3 (286-360)||(27887422-27887496)
chr3 (157-361)||(4462626-4462829)
chr3 (157-361)||(40940818-40941022)
chr3 (157-361)||(46576341-46576545)
chr3 (157-356)||(34492575-34492774)
chr3 (157-292)||(39041852-39041987)
chr3 (157-356)||(48977386-48977585)
chr3 (157-356)||(50731237-50731432)
chr3 (157-356)||(50781422-50781617)
chr3 (157-356)||(53424177-53424375)
chr3 (157-292)||(1178234-1178367)
chr3 (269-356)||(4252508-4252595)
chr3 (157-362)||(30807153-30807358)
chr3 (157-350)||(15566500-15566692)
chr3 (226-336)||(34844396-34844506)
chr3 (157-353)||(26174114-26174310)
chr3 (157-361)||(45272416-45272620)
chr3 (251-356)||(50582990-50583095)
chr3 (157-356)||(25289715-25289913)
chr3 (250-365)||(26158807-26158922)
chr3 (300-355)||(27812011-27812066)
chr3 (157-355)||(52821636-52821833)
chr3 (157-290)||(10083819-10083952)
chr3 (157-350)||(32151428-32151621)
chr3 (318-355)||(11390601-11390638)
chr3 (157-292)||(8097279-8097414)
chr3 (300-356)||(36660768-36660824)
chr3 (157-356)||(51532787-51532986)
chr3 (157-292)||(53233911-53234045)
chr3 (157-204)||(4048100-4048147)
chr3 (158-245)||(48104986-48105073)
chr3 (157-290)||(10190742-10190875)
chr3 (253-355)||(55371381-55371483)
chr3 (157-245)||(8958035-8958124)
chr3 (157-361)||(21362936-21363140)
chr3 (310-355)||(33417975-33418020)
[»] chr6 (20 HSPs)
chr6 (159-338)||(17149458-17149637)
chr6 (157-363)||(9208243-9208449)
chr6 (157-356)||(15360098-15360297)
chr6 (157-354)||(11448871-11449068)
chr6 (157-352)||(9690638-9690833)
chr6 (158-356)||(9238973-9239171)
chr6 (157-275)||(14504082-14504200)
chr6 (157-361)||(34147339-34147543)
chr6 (157-361)||(34159955-34160159)
chr6 (157-361)||(21148511-21148714)
chr6 (157-361)||(3222636-3222838)
chr6 (157-361)||(11007158-11007362)
chr6 (157-361)||(28672060-28672264)
chr6 (184-362)||(33499466-33499645)
chr6 (222-355)||(10377714-10377847)
chr6 (157-292)||(654146-654281)
chr6 (270-350)||(3907545-3907625)
chr6 (258-356)||(8479310-8479408)
chr6 (318-364)||(22576057-22576103)
chr6 (157-238)||(14212998-14213079)
[»] chr7 (34 HSPs)
chr7 (250-355)||(37056217-37056322)
chr7 (157-356)||(2751273-2751472)
chr7 (157-356)||(21217833-21218032)
chr7 (157-356)||(21574102-21574302)
chr7 (157-356)||(22119890-22120089)
chr7 (157-356)||(40542910-40543109)
chr7 (157-355)||(28646972-28647170)
chr7 (157-361)||(18044104-18044308)
chr7 (157-356)||(7275279-7275478)
chr7 (157-356)||(23330739-23330938)
chr7 (158-356)||(19421233-19421431)
chr7 (157-355)||(27312155-27312353)
chr7 (157-355)||(7262220-7262416)
chr7 (250-356)||(12211628-12211734)
chr7 (157-361)||(17196950-17197154)
chr7 (268-361)||(22696317-22696410)
chr7 (157-356)||(2103057-2103254)
chr7 (157-356)||(7175862-7176061)
chr7 (222-360)||(1469110-1469248)
chr7 (157-358)||(23012508-23012709)
chr7 (241-355)||(47541387-47541500)
chr7 (298-365)||(1357175-1357242)
chr7 (158-245)||(32849704-32849791)
chr7 (157-361)||(10091185-10091388)
chr7 (157-202)||(22299958-22300003)
chr7 (230-274)||(32087194-32087238)
chr7 (321-361)||(38864610-38864650)
chr7 (269-356)||(7799944-7800031)
chr7 (157-204)||(22696475-22696522)
chr7 (318-360)||(13332584-13332626)
chr7 (318-356)||(21370599-21370637)
chr7 (318-356)||(28089818-28089856)
chr7 (157-207)||(28089970-28090020)
chr7 (318-356)||(31713056-31713094)
[»] chr2 (19 HSPs)
chr2 (157-361)||(30466830-30467034)
chr2 (157-356)||(8192352-8192550)
chr2 (157-292)||(35171862-35171997)
chr2 (157-356)||(36390569-36390765)
chr2 (157-325)||(6006890-6007057)
chr2 (157-360)||(17324760-17324961)
chr2 (157-355)||(41329842-41330039)
chr2 (230-348)||(3405225-3405343)
chr2 (226-352)||(4618754-4618880)
chr2 (157-292)||(13266552-13266686)
chr2 (157-356)||(15037957-15038156)
chr2 (157-356)||(44946053-44946252)
chr2 (230-356)||(14946777-14946904)
chr2 (157-281)||(28668946-28669070)
chr2 (157-245)||(31778140-31778228)
chr2 (690-789)||(34667609-34667709)
chr2 (246-337)||(19525485-19525576)
chr2 (157-337)||(5394034-5394214)
chr2 (157-190)||(8299859-8299892)
[»] scaffold0576 (1 HSPs)
scaffold0576 (157-356)||(5082-5281)
[»] scaffold0051 (1 HSPs)
scaffold0051 (157-356)||(52871-53070)
[»] scaffold0623 (1 HSPs)
scaffold0623 (157-357)||(1057-1256)
[»] scaffold0366 (2 HSPs)
scaffold0366 (157-357)||(9300-9499)
scaffold0366 (222-357)||(12065-12200)
[»] scaffold0070 (1 HSPs)
scaffold0070 (157-356)||(40323-40521)
[»] scaffold0160 (1 HSPs)
scaffold0160 (157-355)||(29143-29340)
[»] scaffold0019 (1 HSPs)
scaffold0019 (157-292)||(161871-162006)
[»] scaffold0459 (1 HSPs)
scaffold0459 (157-357)||(10695-10893)
[»] scaffold1175 (1 HSPs)
scaffold1175 (157-245)||(2426-2514)
[»] scaffold0049 (1 HSPs)
scaffold0049 (157-245)||(66863-66951)
[»] scaffold0026 (1 HSPs)
scaffold0026 (157-356)||(97366-97565)
[»] scaffold0016 (1 HSPs)
scaffold0016 (157-245)||(32397-32484)
[»] scaffold0199 (1 HSPs)
scaffold0199 (318-364)||(8568-8614)
[»] scaffold0079 (1 HSPs)
scaffold0079 (251-284)||(53112-53145)
[»] scaffold0068 (1 HSPs)
scaffold0068 (157-361)||(41645-41848)


Alignment Details
Target: chr1 (Bit Score: 672; Significance: 0; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 672; E-Value: 0
Query Start/End: Original strand, 8 - 978
Target Start/End: Complemental strand, 31163109 - 31162126
Alignment:
Q  8 gattcttcatcatgtagaatccaaactaaactctacaccccaaccacttatattctaccacctttcaatttcccaaccactaaactctaatattgttata 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31163109 gattcttcatcatgtagaatccaaactaaactctacaccccaaccacttatattctaccacctttcaatttcccaaccactaaactctaatattgttata 31163010  T
Q  108 tatgt-----------tcaaccttatattctcccacctttcaannnnnnnnnnnnnnnnn--aaaactcggtatccgattcaaggatcaactaatcagag 194  Q
    |||||           |||||||||||||||||||||||||||                   |||||||||||||||||||||||||| |||||| ||||    
T  31163009 tatgtattatatttgttcaaccttatattctcccacctttcaattttttcaattttttttttaaaactcggtatccgattcaaggatcgactaattagag 31162910  T
Q  195 aggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagc 294  Q
    | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  31162909 atgaccaatctcactgctcacttgtgtgggccccatttaaagctagagcaaagcactgtatgtacctgtccaccgaaattggtaccagagtgaatcgagc 31162810  T
Q  295 ctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagttattttccaatttctttttacttcgaagtgtttta 394  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31162809 ctaaaaccttaagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagttattttccaatttctttttacttcgaagtgttttt 31162710  T
Q  395 taattaataggaatcgaattttgtacctcaacatttataaaacttacatacaacgcaccaaacagttgtgctagacctgagtggtagaaatatttagctt 494  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31162709 taattaataggaatcgaattttgtacctcaacatttataagacttacatacaacgcaccaaacatttgtgctagacctgagtggtagaaatatttagctt 31162610  T
Q  495 taaaaacaccccgactctcataattaatttacctnnnnnnngtattgtgggatatttgccaatcaccactaaattgtccacctttacttaaattgatttt 594  Q
    |||||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31162609 taaaaacaccccaactctcataattaatttacct-aaaaaagtattgtgggatatttgccaatcaccactaaattgtccacctttacttaaattgatttt 31162511  T
Q  595 tgagatggtttcaatgcacttttggtttaagtcttctattttgctcataattaatttagnnnnnnnacatttctaaaagcatcatgttttgaagcttttt 694  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  31162510 tgagatggtttcaatgcacttttggtttaagtcttctattttgttcataattaatttagtccccccacatttctaaaagcatcatgttttgaagcttttt 31162411  T
Q  695 tccatttgcttttatgacaataccctatgttcataaagttgtcaaaatagttgttatgaattaactgttcatatatcatttttctttctaaaattgggtt 794  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |    
T  31162410 tccatttgcttttatgacaataccctatgtttataaggttgtcaaaatagttgttatgaattaaatgtttatatatcatttttctttctaaaattggg-t 31162312  T
Q  795 ttgtggtcctcagnnnnnnnnacaacttgtggaannnnnnnnngtcctctttctttttatatgatgtggcaaagctcatttggag-ttgaataa-tttag 892  Q
    |||||||||||||        |||||||||||||         |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  31162311 ttgtggtcctcagttttttttacaacttgtggaa-ttttttttgtcctctttctttttatatgatgtggcaaagctcatttggagtttgaataattttag 31162213  T
Q  893 taagtggaactgaattatat-aaatggaaattagaatttgattcaccttctctacactatcacgatctaggaatcactatggttaca 978  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  31162212 taagtggaactgaattatataaaatggaaattagaatttgaatcaccttctctacactatcacgatctagaaatcactatgggtaca 31162126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 239 - 361
Target Start/End: Complemental strand, 1138694 - 1138572
Alignment:
Q  239 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 338  Q
    |||||||||| ||||||| ||||||||| ||||||||| || |||| || |||| ||||| |||||||||| | |||| ||||||||||||| |||||||    
T  1138694 agagcaaagctctgtatggacttgtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaacca 1138595  T
Q  339 ctaggtcaaccccaaatgagtta 361  Q
    |||||||||||||||||| ||||    
T  1138594 ctaggtcaaccccaaatgggtta 1138572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 1486533 - 1486418
Alignment:
Q  239 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 338  Q
    |||||||||| ||||||| ||||  ||||||||||||| |||| || ||||||| ||| | |||||||||| | |||  ||||||||| ||| |||||||    
T  1486533 agagcaaagctctgtatggacttacccatcgaaattggcaccaaagggaatcgaacctgagaccttgagagtagcac--tccaagatcccaagccaacca 1486436  T
Q  339 ctaggtcaaccccaaatg 356  Q
    ||||||||||||||||||    
T  1486435 ctaggtcaaccccaaatg 1486418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 4621237 - 4621436
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | || |||| |||||||| ||||| |||| |||||||    
T  4621237 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagc-aagctctgtatg 4621335  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  4621336 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 4621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 32729741 - 32729543
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| ||| || | |||||||  || ||| ||||| |||  | |||||  | || ||||||||||||| ||||||| || |||||||    
T  32729741 aaaactcggtatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaa-gctctgtatg 32729643  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||| ||| ||||||||| |||| || ||||||| ||| | || ||||||| | || | || |||||| ||| |||||||||||| ||||||||||||    
T  32729642 gacttgcccaccgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatg 32729543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 24122220 - 24122016
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | | ||||| |||||||| ||||| |||| |||||||    
T  24122220 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatg 24122122  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || |  |||||||| ||| |||||||||| | |||||||||||    
T  24122121 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaat 24122022  T
Q  356 gagtta 361  Q
    ||||||    
T  24122021 gagtta 24122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 24674590 - 24674386
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||| |||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  24674590 aaaattcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 24674492  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  24674491 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 24674392  T
Q  356 gagtta 361  Q
    | ||||    
T  24674391 gggtta 24674386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 15059402 - 15059601
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| |||||||||||||  | |||||  | || |||| |||||||| ||||| |||| |||||||    
T  15059402 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagc-aagctctgtatg 15059500  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||  ||| |||||||||||| |||||||||||    
T  15059501 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaat 15059600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 19034468 - 19034569
Alignment:
Q  239 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 338  Q
    |||||||||| ||||||| ||||| ||| ||||||||| |||||||  |||||| ||| |||||||  ||| |||| | ||||||||| |||||||||||    
T  19034468 agagcaaagctctgtatggacttgcccaccgaaattggcaccagagataatcgaacctgaaaccttttgaggaacaaactccaagatcccaaaccaacca 19034567  T
Q  339 ct 340  Q
    ||    
T  19034568 ct 19034569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 30677373 - 30677174
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| |||||| | |||| | | ||||||| ||| ||||||||| |||  | |||||  | ||| |||||||||||| | ||||| || |||||||    
T  30677373 aaaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaa-gctctgtatg 30677275  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||| | ||| | |||||  ||| | || | ||| ||||| ||||||||||||||||||||||||||||    
T  30677274 gacttagcccaccgaaattggcaccagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaat 30677175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 336
Target Start/End: Complemental strand, 37047133 - 37047010
Alignment:
Q  213 cacttttgtgggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaa 312  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||| ||||||| | ||||| | ||| | |||||||||| |     
T  37047133 cacttgtgggggccccatttaaagctagagcaaagctctgtatggactagcccaccaaaatttgtaccagggggaatcaaacctgagaccttgagaggag 37047034  T
Q  313 cacaatccaagatctcaaaccaac 336  Q
    |||| |||||| || ||| |||||    
T  37047033 cacactccaaggtcccaagccaac 37047010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 7766727 - 7766931
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||  ||||| |||| |||||||    
T  7766727 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagc-aagctctgtatg 7766825  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||| | ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| | |||||||||| ||||||| |||    
T  7766826 gacttagcccaccgaaattagcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaat 7766925  T
Q  356 gagtta 361  Q
    | ||||    
T  7766926 gggtta 7766931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 25237071 - 25237180
Alignment:
Q  239 agagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 338  Q
    |||||||| | ||||||| ||||| ||| ||||||||| || |||| ||||||| ||| | |||||||||||| || | ||||||||| ||||| |||||    
T  25237071 agagcaaaactctgtatggacttgcccaccgaaattggcactagagggaatcgaacctgagaccttgagagaagcaaactccaagatcccaaactaacca 25237170  T
Q  339 ctaggtcaac 348  Q
     |||| ||||    
T  25237171 ttaggccaac 25237180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 7947011 - 7946837
Alignment:
Q  186 taatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagag 284  Q
    ||||| ||| ||||||||||||| || |||||  | |||||||||||||||| ||||||| || ||||||  |||| | ||| ||||||||| |||||||    
T  7947011 taatctgaggggaccaatctcaccacccacttgcg-gggccccatttaaagcgagagcaa-gctctgtatagacttagcccaccgaaattggcaccagag 7946914  T
Q  285 tgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 361  Q
     ||||||| | | | ||||   ||| | || | | ||||||||||| |||||||||||||| |||||||||| ||||    
T  7946913 ggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggtta 7946837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 24217064 - 24216976
Alignment:
Q  268 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||| |||| ||  |||||| ||| | |||||||||| | |||| ||||||||| |||  ||||||||||||||||||||||||    
T  24217064 cgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatg 24216976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 29057444 - 29057536
Alignment:
Q  264 ccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||||||| || |||| ||||||| ||| | |||||  ||| | || | ||||||||| |||||||||||||||| ||||||||||||    
T  29057444 ccatcgaaattggcacaagagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatg 29057536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 343
Target Start/End: Complemental strand, 7578606 - 7578420
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||  ||||||||||| ||| | ||||||| ||| || |||||  | ||||||| |||||||  ||||| ||||  ||||||    
T  7578606 aaaactcggtatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagc-aagctttgtatg 7578508  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactagg 343  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | ||||   ||| |||| | ||||||||| ||| ||||||||||||    
T  7578507 gacttagcccaccgaaattggcaccatagggaatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactagg 7578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 46113513 - 46113600
Alignment:
Q  268 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
    ||||||||||||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||||||||||||||| |||||||||||    
T  46113513 cgaaattggtaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 357
Target Start/End: Complemental strand, 17447401 - 17447271
Alignment:
Q  227 ccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatc 326  Q
    ||||||||| | ||||||| ||  |||||| | |||||||   ||||||| ||||||| ||||| | ||  | ||||| |||||| |||| |||||||||    
T  17447401 ccatttaaatccagagcaaggctttgtatggaattgtccactaaaattggcaccagagagaatcaaaccagagaccttcagagaagcacactccaagatc 17447302  T
Q  327 tcaaaccaaccactaggtcaaccccaaatga 357  Q
    ||||| |||||| | || |||||||||||||    
T  17447301 tcaaatcaaccattgggccaaccccaaatga 17447271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 355
Target Start/End: Complemental strand, 18647045 - 18646852
Alignment:
Q  162 tcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtactt 261  Q
    ||||||||||||||||| ||| ||||||  ||| ||| |||||||||  | |||||    |||| || |||||||| |||||||| |  |||||  ||||    
T  18647045 tcggtatccgattcaagaatcgactaattcgaggggatcaatctcaccgcccacttacaggggctccgtttaaagccagagcaaa-ctttgtatagactt 18646947  T
Q  262 -gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||||| || | || |||||| ||| ||||||||||||||||||||||||    
T  18646946 agcccaccgaaattggcaccagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccccaaat 18646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 88486 - 88378
Alignment:
Q  253 tatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 352  Q
    |||| ||||||||||||||||||  ||||||   |||| | |||||||| || |||| | |||| ||||| ||||||  |||||||||| ||||| || |    
T  88486 tatgaacttgtccatcgaaattgacaccagaagaaatcaaacctaaaactttaagagtagcacactccaaaatctcattccaaccactaagtcaatccta 88387  T
Q  353 aatgagtta 361  Q
    |||||||||    
T  88386 aatgagtta 88378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 8077771 - 8077640
Alignment:
Q  230 tttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctc 328  Q
    |||||||| ||||||| || ||||||| |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |    
T  8077771 tttaaagccagagcaa-gctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatccc 8077673  T
Q  329 aaaccaaccactaggtcaaccccaaatgagtta 361  Q
    || |||||||||||| |||||||||||| ||||    
T  8077672 aagccaaccactaggccaaccccaaatgggtta 8077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 9500355 - 9500490
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| |||||||| |||| ||| ||||||| ||   ||||||||||||  | ||||| || |||| || |||||||| ||||| |||| |||||||    
T  9500355 aaaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagc-aagctctgtatg 9500453  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  9500454 gacttagcccaccgaaattggcaccagagagaatcga 9500490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 47091726 - 47091688
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  47091726 tccaagatctcaagccaaccactaggccaaccccaaatg 47091688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 20999235 - 20999332
Alignment:
Q  229 atttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatc 326  Q
    ||||||||| || | ||||| ||||||| ||| | ||| |||||||||||||| || |||| |||||| | | ||||||| || |||| |||||||||    
T  20999235 atttaaagccagcgtaaagctctgtatggactagcccaccgaaattggtaccacagagaattgagcctgagatcttgagaaaagcacactccaagatc 20999332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 2e-27; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 19145412 - 19145610
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| | ||||||||| ||| ||||||||| |||  | |||||  | ||| || ||||||||| |||||||||| |||||||    
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggacc-atttaaagccagagcaaagctctgtatg 19145510  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||| ||| ||||||||| ||||||| ||||||| ||  | |||||||||| | || | ||||||||| |||  ||||||||||| ||||||||||||    
T  19145511 gacttgcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatg 19145610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 157 - 362
Target Start/End: Original strand, 32059440 - 32059645
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  32059440 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 32059538  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||  ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  32059539 gacttagcccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 32059638  T
Q  356 gagttat 362  Q
    | |||||    
T  32059639 gggttat 32059645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 27498731 - 27498935
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| ||  ||||||    
T  27498731 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctatgtatg 27498829  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||  |||| | || | ||||||||  ||| ||||||||||||||||||||||||    
T  27498830 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaat 27498929  T
Q  356 gagtta 361  Q
    | ||||    
T  27498930 gggtta 27498935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 11926501 - 11926706
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcactt-ttgtgggccccatttaaagctagagcaaagcactgtat 255  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||| || |||||   | ||||||| |||||||| ||||| |||| ||||||    
T  11926501 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagc-aagctctgtat 11926599  T
Q  256 gtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
    | |||| | ||| ||||||||| ||||||| ||||| | ||| | ||||   ||| | || | ||||||||| |||||||||||||||| ||||||||||    
T  11926600 ggacttagcccaccgaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaa 11926699  T
Q  355 tgagtta 361  Q
    || ||||    
T  11926700 tgggtta 11926706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 8484661 - 8484860
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  8484661 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 8484759  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||| | ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  8484760 aacttagcccaccgaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 8484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 362
Target Start/End: Original strand, 15641106 - 15641310
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  15641106 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 15641203  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| ||||||||||||  ||||||||||    
T  15641204 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaat 15641303  T
Q  356 gagttat 362  Q
    | |||||    
T  15641304 gggttat 15641310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 234 - 356
Target Start/End: Complemental strand, 36895545 - 36895423
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    |||| ||||||||||  |||||| ||||| ||| ||||||||||||||||| ||||||| | | |||||||||||| | |||| ||||||||| ||| |     
T  36895545 aagccagagcaaagctttgtatggacttgaccaccgaaattggtaccagagggaatcgaacatgaaaccttgagaggagcacactccaagatcccaagct 36895446  T
Q  334 aaccactaggtcaaccccaaatg 356  Q
    || ||||| ||||| | ||||||    
T  36895445 aatcactacgtcaatctcaaatg 36895423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 1827641 - 1827734
Alignment:
Q  268 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 361  Q
    ||||||||||| ||||| ||||||| ||| | ||||   ||| | || | ||||||||||||| ||||||||||||||||||||||||| ||||    
T  1827641 cgaaattggtatcagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtta 1827734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 13038561 - 13038658
Alignment:
Q  264 ccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 361  Q
    ||||| ||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||||||||||||||| |||||||||||| ||||    
T  13038561 ccatcaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtta 13038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 353
Target Start/End: Complemental strand, 38684404 - 38684209
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||| |||||||||||| |||| ||| ||||||| ||| ||||||||| |||  |||||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  38684404 aaaaatcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcg-ggggcccgtttaaagccagagc-aagctctgtatg 38684307  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaa 353  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  |||||||| || |||||||||    
T  38684306 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccccaa 38684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 19456211 - 19456337
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  19456211 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg-gggccccgtttaaagccagagc-aagctctgtatg 19456308  T
Q  257 tactt-gtccatcgaaattggtaccagag 284  Q
     |||| | ||| ||||||||| |||||||    
T  19456309 gacttagcccaccgaaattggcaccagag 19456337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 7085626 - 7085673
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatc 204  Q
    |||||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  7085626 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatc 7085673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 10837493 - 10837442
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcac 208  Q
    |||||||||||||||||  ||||| ||||||||| ||| |||||||||||||    
T  10837493 aaaactcggtatccgatctaaggaccaactaatctgaggggaccaatctcac 10837442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 24158166 - 24158217
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcac 208  Q
    |||| ||||||||||||||||||| | ||||||| ||| |||||||||||||    
T  24158166 aaaattcggtatccgattcaaggaccgactaatctgaggggaccaatctcac 24158217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 33737938 - 33737888
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcac 208  Q
    |||||||||||||||||||||| ||||||||| | ||| |||||||||||||    
T  33737938 aaaactcggtatccgattcaagaatcaactaa-ccgaggggaccaatctcac 33737888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 35425210 - 35425124
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagc 243  Q
    |||| |||||||||||| |||| ||| ||||||| ||||||||||||| |||  | |||||  | ||||||| |||||||| |||||    
T  35425210 aaaattcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc 35425124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 42006829 - 42006787
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 360  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  42006829 tccaagatctcaagccaaccactagcccaaccccaaatgagtt 42006787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 3715070 - 3715107
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  3715070 tccaagatcccaaaccaaccactaggccaaccccaaat 3715107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 3e-23; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 3734623 - 3734822
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||| | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  3734623 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 3734721  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  3734722 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 3734821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 34237655 - 34237854
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  |||||||  | ||||||| |||||||| ||||| |||| |||||||    
T  34237655 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagc-aagctctgtatg 34237753  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34237754 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 4718846 - 4718642
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  4718846 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 4718748  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||| ||| || | || | ||||||||| ||| |||||||||||| ||||||||||    
T  4718747 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 4718649  T
Q  355 tgagtta 361  Q
    || ||||    
T  4718648 tgggtta 4718642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 234 - 365
Target Start/End: Original strand, 11956133 - 11956264
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    ||||||||||||||| |||| |  ||||||||| ||||||||  |||||||  |||||||| ||| |  ||||||||| |||| || ||||||||||| |    
T  11956133 aagctagagcaaagctctgtgtagacttgtccaccgaaattgacaccagagaaaatcgagcttaagatattgagagaatcacactctaagatctcaaatc 11956232  T
Q  334 aaccactaggtcaaccccaaatgagttatttt 365  Q
    |||||||||  |||||  ||||||||||||||    
T  11956233 aaccactagaccaaccttaaatgagttatttt 11956264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 157 - 362
Target Start/End: Complemental strand, 20306109 - 20305904
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||||| ||||||  ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  20306109 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatg 20306011  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||||||||||||| ||||||  |||||||  || | |||||  ||| | || | || |||||| ||| |||||||||||| |||||||||||    
T  20306010 gacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaat 20305911  T
Q  356 gagttat 362  Q
    | |||||    
T  20305910 gggttat 20305904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 157 - 362
Target Start/End: Complemental strand, 21092742 - 21092537
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||||| ||||||  ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  21092742 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagc-aagctctgtatg 21092644  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||||||||||||| ||||||  |||||||  || | |||||  ||| | || | || |||||| ||| |||||||||||| |||||||||||    
T  21092643 gacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaat 21092544  T
Q  356 gagttat 362  Q
    | |||||    
T  21092543 gggttat 21092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 158 - 355
Target Start/End: Complemental strand, 28193674 - 28193477
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 257  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | ||||| |  ||||||| |||||||| ||||| |||| |||||||     
T  28193674 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagc-aagctctgtatgg 28193576  T
Q  258 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
    ||||   ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  28193575 acttaacccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 28193477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 225 - 365
Target Start/End: Original strand, 24339691 - 24339832
Alignment:
Q  225 ccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaaga 324  Q
    |||| |||||||| | ||||||||  |||||| |||| |||| |||||||||||| ||||  |||||| ||||| |||||||||||| ||||||||| ||    
T  24339691 ccccgtttaaagccaaagcaaagctttgtatgaacttatccaccgaaattggtacaagagaaaatcgaacctaagaccttgagagaagcacaatccagga 24339790  T
Q  325 -tctcaaaccaaccactaggtcaaccccaaatgagttatttt 365  Q
     || ||| ||||| |||||| ||||| ||||||  |||||||    
T  24339791 ctcacaacccaactactaggccaacctcaaatggattatttt 24339832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 356
Target Start/End: Original strand, 15259407 - 15259605
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 257  Q
    |||||||| ||||||| |||| ||| ||||||  ||| ||||||||  |||  | |||||  | ||||||| |||||||| ||||||| || |||||||     
T  15259407 aaactcggcatccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatgg 15259505  T
Q  258 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || ||||||||||| |||||||||||||||  ||||||||||||    
T  15259506 acttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatg 15259605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 234 - 356
Target Start/End: Original strand, 34639284 - 34639405
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    |||| |||||||||| ||||||| ||||  ||| ||||||||| ||||||| || |||||||| | |||||||||| | |||| ||||||||| ||| ||    
T  34639284 aagccagagcaaagctctgtatggacttacccaccgaaattggcaccagaggga-tcgagcctgagaccttgagaggagcacactccaagatcccaagcc 34639382  T
Q  334 aaccactaggtcaaccccaaatg 356  Q
    |||||||||   |||||||||||    
T  34639383 aaccactagactaaccccaaatg 34639405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 306
Target Start/End: Complemental strand, 18128714 - 18128565
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||| |||| |||| | | ||||||| ||||||||||||| |||  | |||||  | ||||||| |||||||| |||||||||| || ||||    
T  18128714 aaaactcggtattcgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctctttatg 18128615  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttga 306  Q
     | | | ||| ||||||||| ||||||| |||||||  |||| |||||||    
T  18128614 gattcgcccaccgaaattggcaccagagagaatcgaatctaagaccttga 18128565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 2618387 - 2618188
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||| ||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||| || |||||||| ||||||| || |||||||    
T  2618387 aaaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaa-gctctgtatg 2618289  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | |||  |||||||| ||||||| ||||||| || || ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2618288 gacttagcccactgaaattggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2618189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 8765526 - 8765661
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | | ||||| |||||||| ||||| |||| |||||||    
T  8765526 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatg 8765624  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||||||||||||| ||||||| |||||||    
T  8765625 gacttagcccatcgaaattggcaccagagggaatcga 8765661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 39349457 - 39349258
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||| |||||||||| |||| ||| ||||||| ||| ||| ||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  39349457 aaaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 39349359  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| ||||||||| || |||||||||||    
T  39349358 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaat 39349259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 356
Target Start/End: Original strand, 27746400 - 27746534
Alignment:
Q  222 gggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcc 320  Q
    ||||||| |||||||| ||||||| || ||||||| |||| | ||| ||||||||| |||| || ||||||| ||| | |||||  ||| | || | |||    
T  27746400 gggccccttttaaagccagagcaa-gctctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactcc 27746498  T
Q  321 aagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||||| |||||||||||||||| ||||||||||||    
T  27746499 aagatcccaaaccaaccactaggccaaccccaaatg 27746534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 234 - 356
Target Start/End: Original strand, 22200637 - 22200758
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    |||| |||||||||| ||||||| |||| ||| |||||||||| || |||| ||||||| ||| | || |||||||||  | | ||||||||| ||||||    
T  22200637 aagccagagcaaagctctgtatgaacttttccctcgaaattggcactagagggaatcgaacctgagactttgagagaagtaaactccaagatcccaaacc 22200736  T
Q  334 aaccactaggtcaaccccaaatg 356  Q
    |||||| ||| ||||| ||||||    
T  22200737 aaccac-aggccaacctcaaatg 22200758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 34694659 - 34694775
Alignment:
Q  240 gagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccac 339  Q
    |||||||||  |||||| | ||| ||| ||||||||| ||||||  ||||||| ||||| |||||||||| | || | ||||||||| |||  |||||||    
T  34694659 gagcaaagctttgtatgaatttgcccaccgaaattggcaccagatggaatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccac 34694758  T
Q  340 taggtcaaccccaaatg 356  Q
    |||  ||||||||||||    
T  34694759 tagaccaaccccaaatg 34694775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 11714931 - 11715010
Alignment:
Q  269 gaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaac 348  Q
    |||||||| | ||| | ||||||| ||| ||| |||||||||| || | |||||||||||||||||||||||||| ||||    
T  11714931 gaaattggcatcagggggaatcgaacctgaaatcttgagagaagcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 2639411 - 2639500
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaa 246  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||||    
T  2639411 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaa 2639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 3403567 - 3403707
Alignment:
Q  222 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcca 321  Q
    |||||||||||||||| | | |||||   |||||| ||||| ||| ||||||||| ||||||  ||||||| | ||| |||||||||  | || | ||||    
T  3403567 gggccccatttaaagccaaaacaaagttttgtatggacttgcccaccgaaattggcaccagatggaatcgaacataagaccttgagatgagcaaactcca 3403666  T
Q  322 agatctcaaaccaaccactaggtcaaccccaaatgagttat 362  Q
    ||||||||  |||||| | ||| ||||| |||||| |||||    
T  3403667 agatctcaggccaaccccaaggccaacctcaaatgggttat 3403707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 10292255 - 10292167
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    |||||||||||| |||| |||| ||||||||||| ||  ||||||||| |||  | ||||| || ||||||| |||||||| |||||||    
T  10292255 aaaactcggtattcgatccaagaatcaactaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaa 10292167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 21603431 - 21603343
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 21603343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 28964123 - 28964035
Alignment:
Q  268 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||| ||||||  ||||||| | | ||||||| |||| | || | || ||||||||||||||||||||||  ||||||||||||    
T  28964123 cgaaattggcaccagatggaatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatg 28964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 32879480 - 32879345
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||| || |||| ||| ||||||| ||| ||||||||| |||  | ||||| || ||||||| ||||| |  ||||| |||| |||||||    
T  32879480 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagc-aagctctgtatg 32879382  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  32879381 aacttagcccaccgaaattggcaccagagggaatcga 32879345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 8387537 - 8387643
Alignment:
Q  250 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 349  Q
    ||||||| ||||| ||| | ||||||| |||||||  |||||| | | | ||| |||||||| || | || ||||||||||  ||||||||||| |||||    
T  8387537 ctgtatggacttgcccaccaaaattggcaccagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaacc 8387636  T
Q  350 ccaaatg 356  Q
    |||||||    
T  8387637 ccaaatg 8387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 33585757 - 33585819
Alignment:
Q  287 aatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 349  Q
    |||||| ||| |||| ||||||| | |||| || ||||||||||||||||||||||| |||||    
T  33585757 aatcgaacctgaaactttgagaggagcacactctaagatctcaaaccaaccactaggccaacc 33585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 33747083 - 33747037
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaat 203  Q
    ||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  33747083 aaaactcggtatccgatccaaggatcgactaatccgagagaaccaat 33747037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 352
Target Start/End: Complemental strand, 41070885 - 41070767
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    |||| |||| |||||  |||||| ||||| ||| ||||||||  |||| || ||||||| | | | |||||||||| | |||| ||||||||| |||  |    
T  41070885 aagccagagtaaagctatgtatgaacttgcccaccgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactccaagatcccaagtc 41070786  T
Q  334 aaccactaggtcaacccca 352  Q
    |||||||||| ||||||||    
T  41070785 aaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 40058852 - 40059051
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40058852 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40058950  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||  |||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  40058951 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 40059050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 34844758 - 34844957
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  34844758 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 34844856  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||||||| | |||||||||| |||||||||||    
T  34844857 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaat 34844956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 158 - 356
Target Start/End: Complemental strand, 52983815 - 52983617
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 257  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||     
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatgg 52983717  T
Q  258 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||| | |||  |||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||||||| |||||||||||| ||||||||||||    
T  52983716 acttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 52983617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 231 - 357
Target Start/End: Complemental strand, 41085149 - 41085023
Alignment:
Q  231 ttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaa 330  Q
    |||||||||||||||||| || |||| |||||||||||||||| || | ||||| ||||||| | | | ||||||| || |  ||| |||||||||||||    
T  41085149 ttaaagctagagcaaagctctatatggacttgtccatcgaaatcggcatcagagagaatcgaacattagaccttgaaaggaggacactccaagatctcaa 41085050  T
Q  331 accaaccactaggtcaaccccaaatga 357  Q
      |||||||||| ||||||||||||||    
T  41085049 gtcaaccactagatcaaccccaaatga 41085023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 33696279 - 33696483
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| |||||||| |||| ||  ||||||| |||||||||||||||||  | |||||  | |||||||||||||||| ||||| |||| |||||||    
T  33696279 aaaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagc-aagctctgtatg 33696377  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| |||| || ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||| ||||    
T  33696378 gacttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaat 33696477  T
Q  356 gagtta 361  Q
    | ||||    
T  33696478 gggtta 33696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 352
Target Start/End: Original strand, 27528795 - 27528990
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| |||||||||||||  | |||||  | ||||||| | |||||| ||||| |||| |||||||    
T  27528795 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagc-aagctctgtatg 27528893  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 352  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||| | ||||||||    
T  27528894 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaacccca 27528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 32986394 - 32986195
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| |||| || ||| ||||||||| |||  | |||||  | |||||||||||||||  ||||| |||| |||||||    
T  32986394 aaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagc-aagctctgtatg 32986296  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| |||| || ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  32986295 gacttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 32986196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 34723996 - 34723861
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||||||||||||| ||| || |||||  | ||||||| |||||||| ||||| ||||  ||||||    
T  34723996 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagc-aagctttgtatg 34723898  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  34723897 gacttagcccaccgaaattggcaccagagggaatcga 34723861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 343
Target Start/End: Complemental strand, 12710299 - 12710190
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    |||| |||||||||||||||||| ||||||||| ||||||||  |  | || ||||||| ||| | ||||| |||||| || | ||||||||| ||||||    
T  12710299 aagccagagcaaagcactgtatggacttgtccaccgaaattgacattaaagggaatcgaacctgagaccttaagagaagcatactccaagatcccaaacc 12710200  T
Q  334 aaccactagg 343  Q
    ||||||||||    
T  12710199 aaccactagg 12710190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 356
Target Start/End: Complemental strand, 33992758 - 33992624
Alignment:
Q  222 gggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcc 320  Q
    ||||||| |||||||| ||||||| ||  |||||| |||| | ||| ||||||||| ||||||| ||||||| ||||| ||||   ||| | || | |||    
T  33992758 gggccccgtttaaagccagagcaa-gctatgtatggacttagcccaccgaaattggcaccagagagaatcgaacctaagacctctggaggagcaaactcc 33992660  T
Q  321 aagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||||| ||||||||||||||||||||||| |||||    
T  33992659 aagatcccaaaccaaccactaggtcaaccctaaatg 33992624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 365
Target Start/End: Original strand, 5609202 - 5609410
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||| ||||| |||    |||||  | |||||||||||||||| ||||| |||| |||||||    
T  5609202 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagc-aagctctgtatg 5609300  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacc-ttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||  ||| |  | || | ||||||||| ||| |||||||||||| ||||||||||    
T  5609301 gacttagcccaccgaaattggcaccagagagaatcgaacctgagaccactga-atgagcaaactccaagatcccaagccaaccactaggccaaccccaaa 5609399  T
Q  355 tgagttatttt 365  Q
    || ||| ||||    
T  5609400 tgggttttttt 5609410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 234 - 355
Target Start/End: Original strand, 9646293 - 9646414
Alignment:
Q  234 aagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaacc 333  Q
    |||| |||||||||||||||||| ||||| |||| |||||||  | ||||| ||||| | | | | ||||||| || | |||| || |||||| ||||||    
T  9646293 aagccagagcaaagcactgtatgaacttgcccattgaaattgtcatcagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaacc 9646392  T
Q  334 aaccactaggtcaaccccaaat 355  Q
    |||||||||  |||||||||||    
T  9646393 aaccactagaccaaccccaaat 9646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 25852412 - 25852212
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtggg-ccccatttaaagctagagcaaagcactgtat 255  Q
    ||||||||||||||| | |||| | | ||||||| ||| ||||||||| || | | |||||  | ||| |||  |||||||| ||||| |||| ||||||    
T  25852412 aaaactcggtatccggtccaagaaccgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagagc-aagctctgtat 25852314  T
Q  256 gtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
    | |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  25852313 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 25852214  T
Q  355 tg 356  Q
    ||    
T  25852213 tg 25852212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 46714590 - 46714390
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||| ||  ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| || || |||| |||||||    
T  46714590 aaaactcggtatccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggc-aagctctgtatg 46714492  T
Q  257 tactt-gtccatcgaaattggtaccagagtg-aatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
     |||| | ||| ||||||||| |||| || | |||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  46714491 gacttagcccaccgaaattggcaccaaagggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 46714392  T
Q  355 tg 356  Q
    ||    
T  46714391 tg 46714390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 43719226 - 43719272
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttattt 364  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||    
T  43719226 tccaagatctcaaaccaaccactagaccaaccccaaatgaattattt 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 41621680 - 41621800
Alignment:
Q  241 agcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccact 340  Q
    |||||||| ||||||| | ||| ||| | ||||||| |||||||  |||| | | | | |||||||||| | || | ||||||||||||| ||||||| |    
T  41621680 agcaaagctctgtatggatttgcccaccaaaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccatt 41621779  T
Q  341 aggtcaaccccaaatgagtta 361  Q
    ||| |||||||||||| ||||    
T  41621780 aggccaaccccaaatgggtta 41621800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 54127342 - 54127541
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||| ||||||| | |||| | | ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || ||||||     
T  54127342 aaaactcagtatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtata 54127440  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| || |||| |||| || ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  54127441 gacttagcccaccgaaattggcacaagagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 54127540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 340
Target Start/End: Complemental strand, 7093469 - 7093390
Alignment:
Q  261 tgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccact 340  Q
    |||||| | ||||| | ||||||| ||||||| ||||||||||||| || | |||| ||||||||| ||| |||||||||    
T  7093469 tgtccaccaaaatttgcaccagagagaatcgaacctaaaaccttgaaaggagcacactccaagatcccaagccaaccact 7093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 16339715 - 16339748
Alignment:
Q  251 tgtatgtacttgtccatcgaaattggtaccagag 284  Q
    |||||| |||||||||||||||||||||||||||    
T  16339715 tgtatggacttgtccatcgaaattggtaccagag 16339748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 18875517 - 18875720
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| ||| |||  ||  ||||||| ||| ||| ||||| |||||| ||||| || ||||||  |||||||| ||||||| || |||||||    
T  18875517 aaaactcggtatctgatccaaaaattgactaatccgaggggatcaatcccactacccacttgtgggggcccg-tttaaagccagagcaa-gctctgtatg 18875614  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||  | ||||| ||||||| ||| | | |||   ||||||| | || || ||| |||||||||||||| ||||||| |||||    
T  18875615 gacttagcccaccgaaattgacatcagagggaatcgaacctgagatctttgaagaaacaaactctaaaatcccaaaccaaccactatgtcaaccacaaat 18875714  T
Q  356 gagtta 361  Q
    | ||||    
T  18875715 gggtta 18875720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 8456150 - 8456349
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||||| |||| | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  8456150 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 8456248  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | || |||||| ||| |||||||||||| |||||||||||    
T  8456249 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaat 8456348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 30257821 - 30257622
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||| |||||||||||| |||| ||| ||||||| ||| ||||||||  |||  | |||||  | |||||||||||||||| ||||||| || |||||||    
T  30257821 aaaattcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 30257723  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| ||||||||||||||| |||| || ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  30257722 gacttagtccatcgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 30257623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 35493108 - 35492904
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||| | || |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  35493108 aaaactcggtattcaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 35493010  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  35493009 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 35492910  T
Q  356 gagtta 361  Q
    | ||||    
T  35492909 gggtta 35492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 49258262 - 49258466
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  49258262 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagc-aagctctgtatg 49258360  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| || |||| ||||||| ||| | ||||   ||| | || | | ||||||| ||| ||||||||||||  ||||||||||    
T  49258361 gacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaat 49258460  T
Q  356 gagtta 361  Q
    | ||||    
T  49258461 gggtta 49258466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 40133449 - 40133648
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40133449 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40133547  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||  ||||||| ||||||| ||| | |||||  ||| | || | ||||| ||| ||| |||||||||||| |||||||||||    
T  40133548 gacttagcccaccgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaat 40133647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 45529755 - 45529953
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||||| || |||||||    
T  45529755 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaa-gctctgtatg 45529852  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | |||||||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  45529853 gacttagcccatcgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 45529952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 27887496 - 27887422
Alignment:
Q  286 gaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 360  Q
    ||||||| ||||| || ||||||||| |||| ||||| ||||||| ||||||||||| |||||||||||||||||    
T  27887496 gaatcgaacctaagacattgagagaagcacactccaatatctcaagccaaccactagatcaaccccaaatgagtt 27887422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 4462829 - 4462626
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||| || |||| || |||||||| ||| ||| ||||| |||    |||||  | ||||||| ||||||||||||| || || |||||||    
T  4462829 aaaactcggtatccaatccaagaataaactaatccgagtggatcaatcccaccgtccacttgcg-gggccccgtttaaagctagagtaa-gctctgtatg 4462732  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | |||||||||||||| |||||| ||||||| | | | || ||   || | || | ||||||||||||| |||||||||||| |||||||||||    
T  4462731 aacttagcccatcgaaattggtgccagagggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaat 4462632  T
Q  356 gagtta 361  Q
    ||||||    
T  4462631 gagtta 4462626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 40941022 - 40940818
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| |||||||| ||  | ||||  ||| |||||||||  || || ||||| || ||||||| |||||||  ||||||| || |||||||    
T  40941022 aaaactcggtatctgattcaagaattgagtaattcgaggggaccaatcctaccacccacttgtgggggccccgtttaaagtcagagcaa-gctctgtatg 40940924  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| ||||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  40940923 gacttagtccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 40940824  T
Q  356 gagtta 361  Q
    | ||||    
T  40940823 gggtta 40940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 46576545 - 46576341
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| |||||||  || |||||||||  ||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  46576545 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 46576447  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | |||  |||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  46576446 gacttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 46576347  T
Q  356 gagtta 361  Q
    | ||||    
T  46576346 gggtta 46576341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 34492575 - 34492774
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| ||| |||| ||||||||||| ||  ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  34492575 aaaactcggtatcagatccaagaatcaactaatctgaatggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 34492673  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| | ||||| ||||||| | | | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34492674 gacttagcccaacgaaattggcagcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34492773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 39041852 - 39041987
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||| || |||||  | ||||||| |||||||| ||||| |||| ||| |||    
T  39041852 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagc-aagctctgcatg 39041950  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  39041951 gacttagcccaccgaaattggcaccagagagaatcga 39041987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 48977585 - 48977386
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  | |||||    ||||||| |||||||| ||||| |||| |||||||    
T  48977585 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagc-aagctctgtatg 48977487  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||   ||| ||||||||| ||||||  ||||||| ||| | |||||  ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  48977486 gacttaacccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 48977387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 50731237 - 50731432
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||||| ||||||| ||| ||||||||| |||  | ||||| |||||||||| ||  |||  |||||   || || ||||    
T  50731237 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtgtgggcccc-ttataagtcagagc--tgctctatatg 50731333  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||||||| |||||||||||||| |  ||||| | | | | |||||||||| | |||| | |||||||||||  ||||||||||||| || |||||||    
T  50731334 gacttgtccaccgaaattggtacca-acggaatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatg 50731432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 50781617 - 50781422
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||||| ||||||| ||| ||||||||| |||  | ||||| |||||||||| ||  |||  |||||   || || ||||    
T  50781617 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtgtgggcccc-ttataagtcagagc--tgctctatatg 50781521  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||||||| |||||||||||||| |  ||||| | | | | |||||||||| | |||| | |||||||||||  ||||||||||||| || |||||||    
T  50781520 gacttgtccaccgaaattggtacca-acggaatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatg 50781422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 53424177 - 53424375
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  |||||||  | ||| ||| |||||||| | |||||| | |||||||    
T  53424177 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcg-ggggcccgtttaaagccatagcaaa-ctctgtatg 53424274  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  53424275 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 53424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 1178367 - 1178234
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| ||||  || ||||||| ||| ||||||||| |||  | ||| | || |||||||||||||||| |||||||||  |||||||    
T  1178367 aaaactcggtatccgatccaagattcgactaatccgag-ggaccaatcccaccgcccacgtgtg-gggccccatttaaagccagagcaaagttctgtatg 1178270  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcga 292  Q
     ||||| ||| ||||||||| ||||| | |||||||    
T  1178269 gacttgcccaccgaaattggcaccagggagaatcga 1178234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 269 - 356
Target Start/End: Original strand, 4252508 - 4252595
Alignment:
Q  269 gaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||||||| ||||||| ||||| | | | | |||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||    
T  4252508 gaaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatg 4252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 362
Target Start/End: Original strand, 30807153 - 30807358
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtggg-ccccatttaaagctagagcaaagcactgtat 255  Q
    ||||||||||||||||| |||| ||| ||||||| ||| |||||||||  ||  | |||||  | ||| |||| |||||||| ||||||| || ||||||    
T  30807153 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcctaccgcccacttgcggggggccccgtttaaagccagagcaa-gctctgtat 30807250  T
Q  256 gtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
    | |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  30807251 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 30807350  T
Q  355 tgagttat 362  Q
    || |||||    
T  30807351 tgggttat 30807358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 350
Target Start/End: Original strand, 15566500 - 15566692
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  15566500 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcg-ggggcccgtttaaagccagagc-aagctctgtatg 15566597  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 350  Q
     |||| | ||| ||||||||| || |||| ||||||| ||| | ||||   ||| | || | ||||||||||||| |||||||||||| ||||||    
T  15566598 gacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccc 15566692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 336
Target Start/End: Complemental strand, 34844506 - 34844396
Alignment:
Q  226 cccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagat 325  Q
    |||||||||||| | |||||||| ||||||||||| ||||| |||||||||  |  ||| ||||||| ||| | |||||||||| | |||| |||||| |    
T  34844506 cccatttaaagccatagcaaagctctgtatgtactagtccaccgaaattggctctggagggaatcgaacctgagaccttgagaggagcacactccaaggt 34844407  T
Q  326 ctcaaaccaac 336  Q
    ||||| |||||    
T  34844406 ctcaagccaac 34844396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 353
Target Start/End: Complemental strand, 26174310 - 26174114
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||||| ||||||||| ||||| |||| |||||||    
T  26174310 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagc-aagctctgtatg 26174212  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaa 353  Q
     ||||   ||| ||||||||| |||||||  |||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||| ||||    
T  26174211 gacttaacccaccgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 45272416 - 45272620
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| ||||  |||||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| | |||||    
T  45272416 aaaactcggtatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctccgtatg 45272514  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| |||||||  || | || |   ||| | || | ||||||||| ||| ||||| |||||| |||||||||||    
T  45272515 gacttagcccaccgaaattggcaccagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaat 45272614  T
Q  356 gagtta 361  Q
    | ||||    
T  45272615 gggtta 45272620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 50583095 - 50582990
Alignment:
Q  251 tgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 350  Q
    |||||| ||||  ||| ||||||||| | |||||  |||||| ||| ||||||| |||| | || | ||||||||| |||||||||||||||| ||||||    
T  50583095 tgtatggacttacccaacgaaattggcaacagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccc 50582996  T
Q  351 caaatg 356  Q
    ||||||    
T  50582995 caaatg 50582990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 25289715 - 25289913
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||||| || |||||||    
T  25289715 aaaactcggtatccgatccaagaatcgactaattcgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa-gctctgtatg 25289812  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| || |||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  25289813 gacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 25289912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 250 - 365
Target Start/End: Complemental strand, 26158922 - 26158807
Alignment:
Q  250 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 349  Q
    ||||||| ||||  ||| ||||||||| |||| || ||||  | ||| | |||||||||| | |||| ||||||||||||| |||||   |||| |||||    
T  26158922 ctgtatggacttacccaccgaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaagatctcaagccaacacataggccaacc 26158823  T
Q  350 ccaaatgagttatttt 365  Q
    ||||||||||||||||    
T  26158822 ccaaatgagttatttt 26158807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 27812011 - 27812066
Alignment:
Q  300 accttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
    |||||||||||| |||| ||||| |||||||| ||||||||||||||| |||||||    
T  27812011 accttgagagaagcacattccaaaatctcaaatcaaccactaggtcaatcccaaat 27812066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 355
Target Start/End: Original strand, 52821636 - 52821833
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  52821636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacg-gggccccgtttaaagccagagc-aagctctgtatg 52821733  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| |  || ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  ||||||||||| |||| ||||||    
T  52821734 gacttagctcaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacaccaaat 52821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 10083819 - 10083952
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||    ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  10083819 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagc-aagctctgtatg 10083917  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatc 290  Q
     |||| | ||| ||||||||| || |||| |||||    
T  10083918 gacttagcccaccgaaattggcactagagggaatc 10083952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 350
Target Start/End: Complemental strand, 32151621 - 32151428
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| |||||||||||||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  32151621 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 32151523  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 350  Q
      ||| | ||| ||||||||| || |||| |||||||   | |||||||  ||| | || | ||||||||| |||  ||||||||||| ||||||    
T  32151522 agcttagcccaccgaaattggcactagagagaatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccc 32151428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 11390638 - 11390601
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11390638 tccaagatctcaaaccaaccactaggccaaccccaaat 11390601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 8097279 - 8097414
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| | || |||||||    
T  8097279 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-atgctctgtatg 8097377  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||||||||||| | || |||| |||||||    
T  8097378 gacttagcccatcgaaattagcacaagagggaatcga 8097414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 36660824 - 36660768
Alignment:
Q  300 accttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||||||||| | || | |||||||||  ||||||||||||||||||||||||||||    
T  36660824 accttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaatg 36660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 51532986 - 51532787
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||| ||  ||||| | | ||||||| ||| ||||||||| |||    |||||  | ||| ||||||||||| |||||||| || |||||||    
T  51532986 aaaactcggtattcggatcaagaaccgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagcaa-gctctgtatg 51532888  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| |  |||| ||||||| | | | |||||  ||||| || | ||||| ||||||||||||| | ||||||||||||||||    
T  51532887 gacttagcccaccgaaattggcattagagagaatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaactaataggtcaaccccaaat 51532788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 53233911 - 53234045
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||| ||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||| ||| ||||| |||| |||||||    
T  53233911 aaaactcggtatccga-tcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagc-aagctctgtatg 53234008  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  53234009 gacttagcccaccgaaattggcaccagagagaatcga 53234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 4048147 - 4048100
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatc 204  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||||||||    
T  4048147 aaaactcggtatccgatccaagaatcaactaatccgaggggaccaatc 4048100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 48105073 - 48104986
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    |||||||||||||||| |||| ||| ||||||| ||  |||||||||||||  | ||||| || ||||||  |||||||| |||||||    
T  48105073 aaactcggtatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaa 48104986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 10190742 - 10190875
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||    |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  10190742 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 10190840  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatc 290  Q
     |||| | ||| ||||||||| || |||| |||||    
T  10190841 gacttagcccaccgaaattggcactagagggaatc 10190875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 55371381 - 55371483
Alignment:
Q  253 tatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 352  Q
    |||| ||||||||  ||||||||| |||| || ||||||| | | | |||||||||||| || | ||||| ||| ||| |||||||||||| ||||| ||    
T  55371381 tatgaacttgtccgccgaaattggcaccaaagggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctca 55371480  T
Q  353 aat 355  Q
    |||    
T  55371481 aat 55371483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 8958035 - 8958124
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggcccca-tttaaagctagagcaa 245  Q
    ||||||||||||| ||| |||| ||| | ||||||||| ||||||||| |||  | |||||  | |||||||| ||||||||||||||||    
T  8958035 aaaactcggtatctgatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagcaa 8958124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 21363140 - 21362936
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| | ||||| ||| | ||||||| |||  | |||||  | |||| || |||||||| ||||||| || |||||||    
T  21363140 aaaactcggtatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaa-gctctgtatg 21363042  T
Q  257 tacttgtcc-atcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||  || | ||||||||  ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  21363041 gacttagcctaccgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 21362942  T
Q  356 gagtta 361  Q
    | ||||    
T  21362941 gggtta 21362936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 33417975 - 33418020
Alignment:
Q  310 aaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
    ||||||| || || ||||||||||||||||||| ||||||||||||    
T  33417975 aaacacactctaaaatctcaaaccaaccactagatcaaccccaaat 33418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 1e-22; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 17149458 - 17149637
Alignment:
Q  159 aactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgta 258  Q
    ||||||||||| |||||||||| | ||||||  ||| ||||||||| |||   ||||||  | |||||||||||||||| | ||||| || ||||||| |    
T  17149458 aactcggtatctgattcaaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatgga 17149557  T
Q  259 cttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacca 338  Q
    |||| | | ||||||| | ||||||| ||||||| ||| | |||||||||| | |||| ||||||||| |||||||||||    
T  17149558 cttgccaaccgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaaaccaacca 17149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 157 - 363
Target Start/End: Complemental strand, 9208449 - 9208243
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||  ||| |||| ||| |||| || |||  |||||||| |||  | |||||  | |||||||||||||||| | ||||| || |||||||    
T  9208449 aaaactcggtatttgatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatg 9208350  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||| ||| ||||||||| ||||| | ||||||| ||| | |||||||||| | || | ||||||||| ||| |||||||||||  ||||||||||||    
T  9208349 gacttgcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatg 9208250  T
Q  357 agttatt 363  Q
     ||||||    
T  9208249 ggttatt 9208243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 15360098 - 15360297
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  15360098 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 15360196  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  15360197 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 15360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 157 - 354
Target Start/End: Complemental strand, 11449068 - 11448871
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  11449068 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 11448970  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||    
T  11448969 gacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 352
Target Start/End: Original strand, 9690638 - 9690833
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||||||||||||| |||    ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  9690638 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagc-aagctctgtatg 9690736  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacccca 352  Q
     |||| | ||| ||||||||  || |||   |||||| ||||| ||||   ||  | || | ||||| |||||||||||||||||||||||||||||    
T  9690737 gacttagcccaccgaaattgacactagaagaaatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactaggtcaacccca 9690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 356
Target Start/End: Complemental strand, 9239171 - 9238973
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 257  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||||||||||||||| | ||| |||| || ||||     
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagc-aagctctatatgg 9239073  T
Q  258 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||   ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| ||||||||||||    
T  9239072 acttaacccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9238973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 14504082 - 14504200
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||||| ||||||  ||||||| ||||| |||  | |||||  | || ||||||||||| | |||||||| |||||||||    
T  14504082 aaaactcggtatccgatacaaggatcgactaattcgagaggatcaatcccaccgcccacttgcggggaccccatttaaaaccagagcaaaacactgtatg 14504181  T
Q  257 tacttgtccatcgaaattg 275  Q
     ||||  ||||||||||||    
T  14504182 gacttacccatcgaaattg 14504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 34147543 - 34147339
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  34147543 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatg 34147445  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | || |   ||  | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34147444 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34147345  T
Q  356 gagtta 361  Q
    | ||||    
T  34147344 gggtta 34147339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 34160159 - 34159955
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||| |||||||    
T  34160159 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagctctgtatg 34160061  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | || |   ||  | || | ||||||||| ||| |||||||||||| |||||||||||    
T  34160060 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaat 34159961  T
Q  356 gagtta 361  Q
    | ||||    
T  34159960 gggtta 34159955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 21148511 - 21148714
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||  ||||| |||| |||||||    
T  21148511 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg-gggccccgtttaaagtcagagc-aagctctgtatg 21148608  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
     |||| | ||||||||||||| || |||| ||||||| | | | |||| ||| | || || | ||||||||| ||| |||||||||||| |||| |||||    
T  21148609 gacttagcccatcgaaattggcactagagggaatcgaacttgagacctctga-aaaagcaaactccaagatcccaagccaaccactaggccaactccaaa 21148707  T
Q  355 tgagtta 361  Q
    || ||||    
T  21148708 tgggtta 21148714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 3222636 - 3222838
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||  ||||| |||| |||||||    
T  3222636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg-gggccccgtttaaagacagagc-aagctctgtatg 3222733  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||| |  ||| | || | | ||||||| ||| |||||||||||| |||||||||||    
T  3222734 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacc-tctgaggagcaaactgcaagatcccaagccaaccactaggccaaccccaaat 3222832  T
Q  356 gagtta 361  Q
    | ||||    
T  3222833 gggtta 3222838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 11007362 - 11007158
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||| ||||||||||  ||| ||| ||||||| ||| || |||||| |||  | |||||  | |||||||  ||||||||||||||| ||  ||||||    
T  11007362 aaaactaggtatccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaa-gctttgtatg 11007264  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||  | ||||||||||||| ||| | |||||  ||| | || | ||||||||| ||| ||||||||||| ||||||||||||    
T  11007263 gacttagcccaccgaaattgagagcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaat 11007164  T
Q  356 gagtta 361  Q
    | ||||    
T  11007163 gggtta 11007158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 28672264 - 28672060
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| ||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| | | ||| || |||||||    
T  28672264 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaa-gctctgtatg 28672166  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| | ||||||  ||||||| ||||||| ||||| ||||  |||| | || | |||||||||||||  ||||||||||| |||||||||||    
T  28672165 gacttagcccaccaaaattgacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 28672066  T
Q  356 gagtta 361  Q
    | ||||    
T  28672065 gggtta 28672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 362
Target Start/End: Complemental strand, 33499645 - 33499466
Alignment:
Q  184 actaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccaga 283  Q
    ||||||| ||| ||||||||| |||  | ||||| ||  || |||||||||||| | |||||||   |||||| ||| | ||| ||||||||  ||||||    
T  33499645 actaatccgaggggaccaatcccaccgcccacttgtggagggcccatttaaagccaaagcaaagatttgtatggactagcccaccgaaattgacaccaga 33499546  T
Q  284 gtgaatc-gagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagttat 362  Q
    | ||||| || ||| | |||||||||| | || | ||||||||| ||| |||||||| ||| |||||||||||| |||||    
T  33499545 gggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggttat 33499466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 355
Target Start/End: Complemental strand, 10377847 - 10377714
Alignment:
Q  222 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcca 321  Q
    ||||||| ||| |||  ||||||||||  |||||| ||||| ||| ||||||||| |||| || |||| || ||| | ||||||| |  | |||| ||||    
T  10377847 gggccccgttttaagtcagagcaaagctatgtatggacttgcccaccgaaattggcaccatagggaattgaacctgagaccttgacatgagcacactcca 10377748  T
Q  322 agatctcaaaccaaccactaggtcaaccccaaat 355  Q
    ||||||||| ||||| ||| || |||||||||||    
T  10377747 agatctcaagccaacaactgggccaaccccaaat 10377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 292
Target Start/End: Original strand, 654146 - 654281
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||  ||| ||||||| ||| ||||||||| |||  | |||||  | | ||||| |||||||| ||||| |||| |||||||    
T  654146 aaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagc-aagctctgtatg 654244  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  654245 gacttagcccaccgaaattggcaccagagggaatcga 654281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 3907625 - 3907545
Alignment:
Q  270 aaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccc 350  Q
    ||||||| ||||||| ||||||| | | ||| |||||||| | ||||  |||||||| ||||||||||||||| |||||||    
T  3907625 aaattggcaccagagagaatcgaacttgaaatcttgagaggagcacaccccaagatcccaaaccaaccactagatcaaccc 3907545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 8479408 - 8479310
Alignment:
Q  258 acttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||| ||| ||||||||  |||||||  |||||| ||| ||| ||| |||| | |||| ||||||||| |||  ||||||||||| ||||||||||||    
T  8479408 acttgcccaccgaaattgacaccagaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaatg 8479310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 22576103 - 22576057
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttattt 364  Q
    ||||||||| ||| |||||||||||| |||||||||||| |||||||    
T  22576103 tccaagatcccaagccaaccactaggccaaccccaaatgggttattt 22576057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 14213079 - 14212998
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagct 238  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| ||| || |||||  | || |||| |||||||||    
T  14213079 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaagct 14212998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 2e-21; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 250 - 355
Target Start/End: Complemental strand, 37056322 - 37056217
Alignment:
Q  250 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 349  Q
    ||||||| ||||||||||||||||||| |||||||  ||||||  || |||||||||||| | |||| ||||||||| ||||||||||||||  ||||||    
T  37056322 ctgtatggacttgtccatcgaaattggcaccagaggaaatcgaatctcaaaccttgagaggagcacactccaagatcacaaaccaaccactaaatcaacc 37056223  T
Q  350 ccaaat 355  Q
    ||||||    
T  37056222 ccaaat 37056217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 2751472 - 2751273
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  2751472 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 2751374  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2751373 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 21217833 - 21218032
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||||||||||| ||| ||| ||||| |||  | ||||| || ||| ||| |||||||||||||| |||| |||||||    
T  21217833 aaaactcggtatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagc-aagctctgtatg 21217931  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| | ||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  21217932 gacttagcccaccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 21218031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 21574102 - 21574302
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||| | ||||||| ||| |||||||||||||  |  |||| || ||||||| ||  ||||  | ||||||| |||||||    
T  21574102 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatctcaccgcctacttgtgggggccccgttctaagcctgggcaaagctctgtatg 21574201  T
Q  257 tacttgtccatcgaaattggtaccagagtg-aatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||| ||| |||| |||| |||| || | |||||| |||   |||||||||| | |||| ||||| ||| |||||||||||||||| |||||||||||    
T  21574202 gacttgcccaccgaagttggcaccaaaggggaatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaat 21574301  T
Q  356 g 356  Q
    |    
T  21574302 g 21574302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 22120089 - 22119890
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  22120089 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 22119991  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  22119990 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 22119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 40542910 - 40543109
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40542910 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40543008  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  40543009 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 40543108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 157 - 355
Target Start/End: Complemental strand, 28647170 - 28646972
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| |||||||| ||||||   ||||||  ||| | ||||||| |||  | ||||| || ||||||| ||  |||| |||||||| | ||||||     
T  28647170 aaaactcgatatccgatccaaggacagactaattcgagggaaccaatcccaccgcccacttgtgggggccccgttataagccagagcaaaactctgtatt 28647071  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||| ||| ||||||||| ||||||| ||||||| ||| | |||||||||||| |||| ||||||||| |||  ||| ||||||| |||||||||||    
T  28647070 gacttgcccaccgaaattggcaccagagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaat 28646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 18044308 - 18044104
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||  ||| || ||||| || ||||||| |||||||| ||||| |||| |||||||    
T  18044308 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagc-aagctctgtatg 18044210  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| || |||| ||||||| |||   ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  18044209 gacttagcccaccgaaattggcacaagagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 18044110  T
Q  356 gagtta 361  Q
    | ||||    
T  18044109 gggtta 18044104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 7275478 - 7275279
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||  |||||||| ||||| |||| |||||||    
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagc-aagctctgtatg 7275380  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  7275379 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7275280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 23330739 - 23330938
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||||  ||||||  ||| |||||||||| ||  | |||||  |  || ||| ||| |||| |||||||||| |||||||    
T  23330739 aaaactcggtatccgatccaaggattgactaatttgaggggaccaatcttaccgcccacttgcggaggtcccgttttaagccagagcaaagctctgtatg 23330838  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||| ||| ||||||||| ||| ||| || |||| ||| | |||||||||| | |||| || || ||| ||| ||||||||||||  |||||||||||    
T  23330839 gacttgcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaatg 23330938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 356
Target Start/End: Complemental strand, 19421431 - 19421233
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatgt 257  Q
    |||||||||||| |||||||| ||| ||||||| |||  |||||||| |||  | ||||| || | |||||||||||||  ||||| |||| |||||||     
T  19421431 aaactcggtatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagc-aagctctgtatgg 19421333  T
Q  258 actt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||| | ||||||||||||  ||||||   |||||| ||| | ||||  |||| | || | ||||||||| ||| |||||||||| ||||||||||||||    
T  19421332 acttagcccatcgaaattgacaccagaagaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatg 19421233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 355
Target Start/End: Complemental strand, 27312353 - 27312155
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||| || |||||||  ||||  | || |||||||    
T  27312353 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagtcagaggta-gctctgtatg 27312255  T
Q  257 tacttgtc-catcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||| | |||||||||||| || |||| ||||||| ||| ||||||  |||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  27312254 gacttggcacatcgaaattggcactagagggaatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 27312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 355
Target Start/End: Complemental strand, 7262416 - 7262220
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||||  | ||||||  ||| ||||||||| ||| | |||||| || ||| |||||||||||| |||| ||||| || ||||    
T  7262416 aaaactcggtatccgattcaagggccgactaattcgaggggaccaatcccacca-tcacttgtg-gggacccatttaaagccagagtaaagctctatatg 7262319  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     | ||||||||||||||||| | ||  | ||||| | | | | |||||||||| | |||| | ||||||| |||  ||||||||| ||||||| |||||    
T  7262318 gatttgtccatcgaaattggcatcatggagaatcaaacttgagaccttgagaggatcacactacaagatcacaagtcaaccactaagtcaacctcaaat 7262220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 12211628 - 12211734
Alignment:
Q  250 ctgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaacc 349  Q
    ||||||| ||||||||||||||||||| |||||||  |||| | ||| | | |||||||| | |||| |||||||||  || |||||||||||| |||||    
T  12211628 ctgtatggacttgtccatcgaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaacc 12211727  T
Q  350 ccaaatg 356  Q
    |||||||    
T  12211728 ccaaatg 12211734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 17196950 - 17197154
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  17196950 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 17197048  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| |  || ||||||||| ||||||| ||||||| | | | ||||   ||| | || | ||||||||| |||||||||||||||| | |||||||||    
T  17197049 gacttagctcaccgaaattggcaccagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaat 17197148  T
Q  356 gagtta 361  Q
    | ||||    
T  17197149 gggtta 17197154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 22696410 - 22696317
Alignment:
Q  268 cgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagtta 361  Q
    ||||||||| ||||||| ||||| | ||| | |||||||||| | |||| ||||||||| |||| ||||||||||| ||||||| |||||||||    
T  22696410 cgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccctaatgagtta 22696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 2103254 - 2103057
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| || | ||| ||||||| ||| ||||||||| |||  | |||||  | |||||||||||||||| ||||||| || |||||||    
T  2103254 aaaactcggtatccgat-catgaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 2103158  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  2103157 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 2103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 7175862 - 7176061
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||| ||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||  |||||||| ||||||| || |||||||    
T  7175862 aaaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaa-gctctgtatg 7175960  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  7175961 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 7176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 360
Target Start/End: Complemental strand, 1469248 - 1469110
Alignment:
Q  222 gggccccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcca 321  Q
    ||||| |||||||||| | || |||||  |||||| ||||| ||||||||||||| |  | ||  |||||| ||| | |||||||||  |||| | ||||    
T  1469248 gggcctcatttaaagccaaagtaaagctttgtatggacttgcccatcgaaattggcattaaaggaaatcgaacctgagaccttgagatgaacaaactcca 1469149  T
Q  322 agatctcaaaccaaccactaggtcaaccccaaatgagtt 360  Q
    |||| ||||  ||||||||||| ||||||||||||||||    
T  1469148 agatttcaagtcaaccactaggccaaccccaaatgagtt 1469110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 358
Target Start/End: Original strand, 23012508 - 23012709
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||  | | ||  ||||||  ||| ||||||||| |||  | ||||| || |||||||||||||||| ||||| |||| |||||||    
T  23012508 aaaactcggtatccgatcaatgaattgactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagc-aagctctgtatg 23012606  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| || |||| ||||| | ||||| ||||   ||||| || | ||||||||| ||| ||||||||| || |||||| ||||    
T  23012607 gacttagcccaccgaaattggcactagagggaatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaaccctaaat 23012706  T
Q  356 gag 358  Q
    |||    
T  23012707 gag 23012709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 47541500 - 47541387
Alignment:
Q  241 agcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccact 340  Q
    |||||||| ||| ||| ||||||||| ||||||||  |||| || ||||| | | |||||||||||||| | |||| |||||||||| |||||||||| |    
T  47541500 agcaaagc-ctggatgaacttgtccaccgaaattgacaccaaagagaatcaaacttaaaaccttgagaggagcacactccaagatctgaaaccaaccatt 47541402  T
Q  341 aggtcaaccccaaat 355  Q
    ||| ||| |||||||    
T  47541401 aggccaatcccaaat 47541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 1357175 - 1357242
Alignment:
Q  298 aaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatgagttatttt 365  Q
    |||| |||||||||||| | ||||||||| ||||  |||||| |||||||||||||||||||| ||||    
T  1357175 aaactttgagagaaacaaattccaagatcacaaattaaccacaaggtcaaccccaaatgagttttttt 1357242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 32849791 - 32849704
Alignment:
Q  158 aaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    |||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||| | ||||| || | | |||||||||||| |||||||    
T  32849791 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccactgcccacttatgggagtcccatttaaagccagagcaa 32849704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 10091388 - 10091185
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| ||| |||| ||| ||||||| ||| ||| ||||| |||  | |||||  | || ||||||||||||| ||||||| || |||||||    
T  10091388 aaaactcggtatcggat-caagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaa-gctctgtatg 10091291  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  10091290 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 10091191  T
Q  356 gagtta 361  Q
    | ||||    
T  10091190 gggtta 10091185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 22300003 - 22299958
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaa 202  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||    
T  22300003 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaa 22299958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 32087238 - 32087194
Alignment:
Q  230 tttaaagctagagcaaagcactgtatgtacttgtccatcgaaatt 274  Q
    ||||||||||||||||||| || |||| |||||||||||||||||    
T  32087238 tttaaagctagagcaaagctctatatgaacttgtccatcgaaatt 32087194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 38864610 - 38864650
Alignment:
Q  321 aagatctcaaaccaaccactaggtcaaccccaaatgagtta 361  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  38864610 aagatctcaagtcaaccactaggtcaaccccaaatgagtta 38864650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 356
Target Start/End: Original strand, 7799944 - 7800031
Alignment:
Q  269 gaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    |||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||||||||||||||||    
T  7799944 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatg 7800031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 22696522 - 22696475
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatc 204  Q
    ||||||||||||||||| |||||| | ||||||| |||||||||||||    
T  22696522 aaaactcggtatccgatccaaggaccgactaatccgagaggaccaatc 22696475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 13332584 - 13332626
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatgagtt 360  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||    
T  13332584 tccaagatcccaagccaaccactaggccaaccccaaatgagtt 13332626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 21370637 - 21370599
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  21370637 tccaagatcccaaaccaaccactaggccaaccccaaatg 21370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 28089856 - 28089818
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  28089856 tccaagatctcaagccaaccactaggccaaccccaaatg 28089818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 28090020 - 28089970
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctca 207  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||||||    
T  28090020 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctca 28089970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 31713056 - 31713094
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  31713056 tccaagatcccaaaccaaccactaggccaaccccaaatg 31713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 2e-21; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 30466830 - 30467034
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||  ||||||||| |||| | |||||  | ||||||  |||||||| ||||||| || |||||||    
T  30466830 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaa-gctctgtatg 30466928  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| | ||||| ||||||| ||| | ||||  |||| |||| | ||||| ||| |||||||||||||||| |||||||||||    
T  30466929 gacttagcccaccgaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaat 30467028  T
Q  356 gagtta 361  Q
    | ||||    
T  30467029 gggtta 30467034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 8192352 - 8192550
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||||| | ||||||| ||| || |||||| |||  | |||||  | ||| ||  | ||| || |||||||||| || ||||    
T  8192352 aaaactcggtatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggccgttctaa-gccagagcaaagctctatatg 8192450  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaatg 356  Q
     ||||| ||| ||| ||||| ||||||| ||||||| ||| | |||||||||| | |||| ||||||||| ||| |||||||||||| ||||||||||||    
T  8192451 gacttgcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatg 8192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 35171997 - 35171862
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  35171997 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 35171899  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| |||||||||| |||||| |||||||    
T  35171898 gacttagcccaccgaaattggtgccagagggaatcga 35171862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 36390569 - 36390765
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||| ||| ||| ||| ||| ||||||||| |||  | |||||  | ||| |||||||||||  ||||||| ||  ||||||    
T  36390569 aaaactcggtatccgattcaagtatcgactgatccgag-ggaccaatcccaccgcccacttgcgggggtcccatttaaagtcagagcaa-gctttgtatg 36390666  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| ||||| ||||||||| |||||||  |||||| ||| | |||||  ||||| || | ||  ||||| |||||||||||||||| |||||||||||    
T  36390667 gacttagtccaccgaaattggcaccagaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaat 36390764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 6006890 - 6007057
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| |||||||||||| ||||||| |||  |||||||| |||    |||||    | || |||||| |||||||| |||||| |||||||    
T  6006890 aaaactcggtatctgattcaaggatcgactaatctgaggagaccaatcacaccgtccacttgca-gagctccattttaagctagaacaaagctctgtatg 6006988  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagat 325  Q
     ||| |  || ||||||||||| ||||| |||||||  ||| ||||||||||||| |||| ||||||||    
T  6006989 gactcgaacaccgaaattggtatcagagagaatcgaatctagaaccttgagagaagcacactccaagat 6007057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 360
Target Start/End: Complemental strand, 17324961 - 17324760
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| |||||||| |||| ||| ||||||  ||| |||| |||| |||  | ||||| || |||||| ||||||||| ||||||| || |||||||    
T  17324961 aaaactcgatatccgat-caagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggccc-atttaaagccagagcaa-gctctgtatg 17324865  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | ||||   ||| | || | ||||||||  |||||||||||||||| |||||||||||    
T  17324864 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaat 17324765  T
Q  356 gagtt 360  Q
    |||||    
T  17324764 gagtt 17324760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 355
Target Start/End: Complemental strand, 41330039 - 41329842
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||| | |||| | | ||||||| ||| |||||||||||||  | ||||| || |||||||||||||||| ||||| |||| || ||||    
T  41330039 aaaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagc-aagctct-tatg 41329942  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||  | ||||||| ||||||| |||||||  || |||||||  ||| | || | || |||||| ||||| |||||||||| |||||||||||    
T  41329941 gacttagcccgccaaaattggcaccagagggaatcgaatctgaaacctttggaggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 230 - 348
Target Start/End: Original strand, 3405225 - 3405343
Alignment:
Q  230 tttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctca 329  Q
    ||||||||||||| |||||  |||||| ||||| ||||  ||||||| ||||||| ||||||| |||   |||||||||  | |||| ||||||||| ||    
T  3405225 tttaaagctagagtaaagctttgtatggacttgcccattaaaattggcaccagagggaatcgaacctgtgaccttgagatgagcacattccaagatccca 3405324  T
Q  330 aaccaaccactaggtcaac 348  Q
    |  ||||||||||||||||    
T  3405325 agtcaaccactaggtcaac 3405343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 352
Target Start/End: Original strand, 4618754 - 4618880
Alignment:
Q  226 cccatttaaagctagagcaaagcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagat 325  Q
    |||||||||||| |||||||||   |||||| ||||| ||  ||||||||| ||||| |  |||||| ||| |||||||||||| | || | ||||||||    
T  4618754 cccatttaaagccagagcaaagttttgtatggacttgcccgccgaaattggcaccaggggaaatcgaacctgaaaccttgagaggagcatactccaagat 4618853  T
Q  326 ctcaaaccaaccactaggtcaacccca 352  Q
      ||| |||||||||||| ||||||||    
T  4618854 tccaagccaaccactaggccaacccca 4618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 13266686 - 13266552
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||| |||||||| |||| ||| ||||||  ||| ||||||||| || ||| |||||  | ||||||| |||||||| ||||||| || |||||||    
T  13266686 aaaactcgatatccgatccaagaatcgactaatttgaggggaccaatcccattacccacttgcg-gggccccgtttaaagccagagcaa-gctctgtatg 13266589  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| ||||| || |||||| |||||||||||||||    
T  13266588 gacttagtccaccggaattggcaccagagtgaatcga 13266552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 15038156 - 15037957
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||| || |||||||| | ||| |||| |||||||    
T  15038156 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagc-aagctctgtatg 15038058  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | |||||  ||| | || | ||||||||| | |  ||||||||||| |||||||||||    
T  15038057 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaat 15037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 44946053 - 44946252
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||| ||| |||||||| ||||| |||  |||||||    
T  44946053 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagc-aagttctgtatg 44946151  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| |||| || ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||  |||||||||||    
T  44946152 gacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaat 44946251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 230 - 356
Target Start/End: Complemental strand, 14946904 - 14946777
Alignment:
Q  230 tttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctc 328  Q
    ||||||||||||||| ||| | ||||| |||| | |||  |||||||  |||||||  |||||| |||||||||||||||| | || | | |||||||||    
T  14946904 tttaaagctagagcatagctccgtatggacttagcccactgaaattgacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctc 14946805  T
Q  329 aaaccaaccactaggtcaaccccaaatg 356  Q
    ||  ||||||||||| |||| |||||||    
T  14946804 aagtcaaccactaggccaactccaaatg 14946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 28669070 - 28668946
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||  ||| ||||||| ||| ||||||||| |||  | ||||| || ||||||| |||||||| | ||| |||| |||||||    
T  28669070 aaaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagc-aagctctgtatg 28668972  T
Q  257 tactt-gtccatcgaaattggtacca 281  Q
     |||| ||||| ||||||||| ||||    
T  28668971 gacttagtccaccgaaattggcacca 28668946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 31778228 - 31778140
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    ||||||||||||||||| |||| |   ||||||| |||||||||||||||||    |||||  | |||||||||||||||| |||||||    
T  31778228 aaaactcggtatccgatccaagaactgactaatctgagaggaccaatctcaccgtccacttgcgggggccccatttaaagccagagcaa 31778140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 690 - 789
Target Start/End: Complemental strand, 34667709 - 34667609
Alignment:
Q  690 ttttttccatttgcttttatgacaataccc-tatgttcataaagttgtcaaaatagttgttatgaattaactgttcatatatcatttttctttctaaaat 788  Q
    |||||||| ||||||||||||| |||| || ||| ||||||  ||||||||||||||| |  | |||||  |||||||||||||||| ||| || |||||    
T  34667709 ttttttccttttgcttttatgataatatccatatattcatagggttgtcaaaatagttatcgtaaattagatgttcatatatcatttatctatcaaaaat 34667610  T
Q  789 t 789  Q
    |    
T  34667609 t 34667609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 19525485 - 19525576
Alignment:
Q  246 agcactgtatgtacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacc 337  Q
    |||| |||||| ||||| ||| | ||||||| ||||||| ||||||| ||| | | ||||||||||||||| | ||||||| ||| ||||||    
T  19525485 agcattgtatggacttgcccaccaaaattggcaccagagggaatcgaacctgagatcttgagagaaacacacttcaagatcccaagccaacc 19525576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 337
Target Start/End: Complemental strand, 5394214 - 5394034
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||| ||||||||||||  ||||| | ||||||| ||  ||||||||| |||  | |||||  |  ||||||||||||||  |||||||| | |||||||    
T  5394214 aaaattcggtatccgatctaaggaccgactaatccgaacggaccaatcccaccgcccacttgcggcggccccatttaaagtcagagcaaa-ctctgtatg 5394116  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaacc 337  Q
     |||| | ||||||||||||  ||||||| ||||||| ||| | |||||  ||| | || | ||||||||||||| ||||||    
T  5394115 gacttagcccatcgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 8299859 - 8299892
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatc 190  Q
    |||||||||||||||||||||| |||||||||||    
T  8299859 aaaactcggtatccgattcaagaatcaactaatc 8299892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 5082 - 5281
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | || ||  | ||||||| |||||||| ||||||| || |||||||    
T  5082 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaa-gctctgtatg 5180  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  5181 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 5280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 52871 - 53070
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||  ||  | ||| |  | ||||||| |||||||| ||||| |||| |||||||    
T  52871 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagc-aagctctgtatg 52969  T
Q  257 ta-cttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |  ||| ||| ||||||||| ||||||| ||||||| ||| || |||   ||| | || | ||||||||| ||| |||||||||||| ||| |||||||    
T  52970 gattttgcccaccgaaattggcaccagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaat 53069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 1057 - 1256
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||    |||||  | |||||||||||||||| ||||||| || |||||||    
T  1057 aaaactcggtatccgat-caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 1154  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  1155 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 9300 - 9499
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||| |||    |||||  | |||||||||||||||| ||||||| || |||||||    
T  9300 aaaactcggtatccgat-caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaa-gctctgtatg 9397  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| |||||||||  |||||| ||||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  9398 gacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 357
Target Start/End: Original strand, 12065 - 12200
Alignment:
Q  222 gggccccatttaaagctagagcaaagcactgtatgtactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatcc 320  Q
    |||||||||||||||| ||||||| || ||||||| |||| | ||| |||||||||  ||||||  |||||| ||| | ||||   ||| | || | |||    
T  12065 gggccccatttaaagccagagcaa-gctctgtatggacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactcc 12163  T
Q  321 aagatctcaaaccaaccactaggtcaaccccaaatga 357  Q
    |||||| ||| |||||||||||| |||||||||||||    
T  12164 aagatcccaagccaaccactaggccaaccccaaatga 12200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 356
Target Start/End: Complemental strand, 40521 - 40323
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| ||||| |||| |||||||    
T  40521 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagc-aagctctgtatg 40424  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaacct-tgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaa 354  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||| ||| || | || | |||||||||  || |||||||||||| ||||||||||    
T  40423 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcctaagccaaccactaggccaaccccaaa 40325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 355
Target Start/End: Original strand, 29143 - 29340
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| ||||||   ||||||| ||| ||||||||| ||||   || ||  | ||| || |||| |||| |||||||||| |||||||    
T  29143 aaaactcggtatccgatccaaggactgactaatctgaggggaccaatcccactgtccatttgcgggggtcc-attttaagccagagcaaagctctgtatg 29241  T
Q  257 tacttgtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||  | | ||||| ||| | ||| | ||||||| ||||| |||||||||| |||||| | ||||||  ||| |||||||||||| ||| |||||||    
T  29242 gacttaccgaccgaaaatggcatcagcgggaatcgaacctaagaccttgagaggaacacacttcaagattccaagccaaccactaggccaatcccaaat 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 162006 - 161871
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||| ||| |||| ||| ||||||| ||| ||||||||| |||  | |||||  | |||||||||| ||||| ||||| |||| |||||||    
T  162006 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagc-aagctctgtatg 161908  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcga 292  Q
     |||| | ||| ||||||||| ||||||| |||||||    
T  161907 gacttagcccaccgaaattggcaccagagggaatcga 161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 10695 - 10893
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||||| |||| ||  ||||||  ||| ||||||||| |||    ||||| || |||||||||||||||| ||||||| || |||||||    
T  10695 aaaactcggtatccgat-caagaattgactaattcgaggggaccaatcccaccgtccacttgtg-gggccccatttaaagccagagcaa-gctctgtatg 10791  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| |||||||||  ||||||  |||||| ||| | ||||   ||| | || | ||||||||| ||| |||||||||||| |||||||||||    
T  10792 gacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 2426 - 2514
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    ||||||||||||||||||||||||   ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  2426 aaaactcggtatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 66951 - 66863
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||| |||  | |||||  | ||||||| |||||||| |||||||    
T  66951 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 66863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 97366 - 97565
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||||||||||| | |||  | | ||||||  ||||||||||||| |||  | |||||  | ||| ||| |||||||  ||||||| || |||||||    
T  97366 aaaactcggtatccggtccaaaaaccgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaa-gctctgtatg 97464  T
Q  257 tactt-gtccatcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     |||| | ||| ||||||||| ||||||| ||||||| ||| | |||||  ||| | || | | ||||||| ||| |||||||||||| |||||||||||    
T  97465 gacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaat 97564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 32484 - 32397
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaa 245  Q
    |||||||||||||||| ||||| ||| ||||||| ||| ||||||||| ||| || |||||  | ||||| |||||||||| |||||||    
T  32484 aaaactcggtatccga-tcaagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaa 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 8568 - 8614
Alignment:
Q  318 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttattt 364  Q
    ||||||||| ||| |||||||||||| |||||||||||| |||||||    
T  8568 tccaagatcccaagccaaccactaggccaaccccaaatgggttattt 8614  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 53145 - 53112
Alignment:
Q  251 tgtatgtacttgtccatcgaaattggtaccagag 284  Q
    |||||| |||||||||||||||||||||||||||    
T  53145 tgtatggacttgtccatcgaaattggtaccagag 53112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 41645 - 41848
Alignment:
Q  157 aaaactcggtatccgattcaaggatcaactaatcagagaggaccaatctcactactcacttttgtgggccccatttaaagctagagcaaagcactgtatg 256  Q
    ||||||| ||||||||| |||| ||| ||||||| ||| ||||||||| || | | |||||    ||||||| |||||||| ||||||| || |||||||    
T  41645 aaaactctgtatccgat-caagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaa-gctctgtatg 41742  T
Q  257 tacttgtc-catcgaaattggtaccagagtgaatcgagcctaaaaccttgagagaaacacaatccaagatctcaaaccaaccactaggtcaaccccaaat 355  Q
     ||||  | || ||||||||| || |||| ||||||| ||| | ||||   ||| | || | ||||||||| |||  ||||||||||| |||||||||||    
T  41743 gacttagcacaacgaaattggaacaagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaat 41842  T
Q  356 gagtta 361  Q
    | ||||    
T  41843 gggtta 41848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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