View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0304_high_14 (Length: 225)

Name: NF0304_high_14
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0304_high_14
NF0304_high_14
[»] chr3 (20 HSPs)
chr3 (1-217)||(12033398-12033614)
chr3 (1-217)||(17131617-17131834)
chr3 (1-217)||(14865731-14865948)
chr3 (1-207)||(19235033-19235237)
chr3 (39-217)||(13302195-13302372)
chr3 (39-217)||(13312851-13313028)
chr3 (39-176)||(13323782-13323920)
chr3 (77-186)||(51301550-51301659)
chr3 (112-186)||(10389428-10389502)
chr3 (112-186)||(10414517-10414591)
chr3 (112-186)||(10421187-10421261)
chr3 (116-217)||(23370458-23370560)
chr3 (32-170)||(17240513-17240652)
chr3 (119-176)||(24933823-24933880)
chr3 (32-170)||(18929161-18929300)
chr3 (116-170)||(9534328-9534382)
chr3 (158-207)||(10555353-10555402)
chr3 (116-168)||(20247791-20247843)
chr3 (116-168)||(24192957-24193009)
chr3 (119-171)||(41455097-41455149)
[»] chr7 (19 HSPs)
chr7 (1-186)||(20906446-20906630)
chr7 (1-217)||(16090960-16091178)
chr7 (1-217)||(29181061-29181279)
chr7 (80-217)||(2971219-2971356)
chr7 (1-77)||(2966850-2966926)
chr7 (1-182)||(2465248-2465427)
chr7 (1-179)||(3857357-3857534)
chr7 (32-217)||(14319582-14319768)
chr7 (14-212)||(14230679-14230878)
chr7 (118-186)||(31155396-31155464)
chr7 (39-170)||(13679416-13679548)
chr7 (116-170)||(11382871-11382925)
chr7 (116-170)||(11389348-11389402)
chr7 (116-178)||(21230952-21231014)
chr7 (116-171)||(14422985-14423040)
chr7 (116-170)||(16009577-16009631)
chr7 (119-171)||(12590643-12590695)
chr7 (119-171)||(13007435-13007487)
chr7 (116-172)||(20311050-20311106)
[»] chr1 (9 HSPs)
chr1 (1-217)||(20851085-20851302)
chr1 (4-217)||(20857712-20857926)
chr1 (4-217)||(21706164-21706378)
chr1 (1-217)||(21710704-21710920)
chr1 (32-170)||(18712715-18712854)
chr1 (118-176)||(20044946-20045004)
chr1 (60-170)||(32651516-32651627)
chr1 (116-170)||(20437024-20437078)
chr1 (119-171)||(41112038-41112090)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-207)||(135324-135530)
[»] chr8 (7 HSPs)
chr8 (1-217)||(24320623-24320840)
chr8 (60-170)||(29643386-29643497)
chr8 (39-170)||(18614195-18614327)
chr8 (32-170)||(23482053-23482192)
chr8 (116-186)||(44477623-44477693)
chr8 (116-186)||(44492781-44492851)
chr8 (116-168)||(8727735-8727787)
[»] chr5 (21 HSPs)
chr5 (15-217)||(19236799-19237002)
chr5 (4-217)||(22461044-22461258)
chr5 (4-217)||(22467668-22467882)
chr5 (1-207)||(20772856-20773059)
chr5 (1-207)||(20781631-20781834)
chr5 (1-182)||(24929917-24930097)
chr5 (1-217)||(28909243-28909458)
chr5 (1-217)||(28945638-28945853)
chr5 (2-179)||(20820105-20820279)
chr5 (2-179)||(20827205-20827379)
chr5 (1-217)||(28895995-28896210)
chr5 (1-217)||(28924821-28925036)
chr5 (1-217)||(28889291-28889506)
chr5 (1-178)||(34829970-34830146)
chr5 (32-170)||(18407944-18408083)
chr5 (32-170)||(23111200-23111339)
chr5 (116-172)||(22438746-22438802)
chr5 (116-171)||(38144536-38144591)
chr5 (116-170)||(19512387-19512441)
chr5 (116-170)||(28370055-28370109)
chr5 (119-171)||(23528634-23528686)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-176)||(9221-9396)
[»] chr2 (14 HSPs)
chr2 (1-217)||(25180882-25181099)
chr2 (1-207)||(10462-10669)
chr2 (37-217)||(26885103-26885284)
chr2 (32-217)||(27207672-27207858)
chr2 (118-197)||(23168272-23168351)
chr2 (118-197)||(23579529-23579608)
chr2 (32-170)||(23265058-23265197)
chr2 (32-170)||(23280126-23280265)
chr2 (119-186)||(5706008-5706075)
chr2 (116-170)||(6483718-6483772)
chr2 (116-170)||(6487185-6487239)
chr2 (116-170)||(21908360-21908414)
chr2 (153-186)||(27366533-27366566)
chr2 (119-171)||(26583830-26583882)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-217)||(79442-79660)
[»] chr6 (22 HSPs)
chr6 (4-217)||(20007900-20008114)
chr6 (1-207)||(9099036-9099240)
chr6 (1-217)||(21364436-21364648)
chr6 (1-217)||(23968418-23968630)
chr6 (51-186)||(31252357-31252493)
chr6 (118-186)||(15458492-15458560)
chr6 (118-186)||(15465087-15465155)
chr6 (118-192)||(11288647-11288721)
chr6 (116-178)||(10986173-10986235)
chr6 (116-186)||(34639971-34640041)
chr6 (116-186)||(34646645-34646715)
chr6 (32-170)||(9187410-9187550)
chr6 (143-192)||(28288488-28288537)
chr6 (116-171)||(29614146-29614201)
chr6 (116-170)||(4477858-4477912)
chr6 (116-170)||(23839199-23839253)
chr6 (116-178)||(24512836-24512898)
chr6 (153-186)||(24563475-24563508)
chr6 (119-171)||(12168366-12168418)
chr6 (119-171)||(19287275-19287327)
chr6 (119-171)||(19785869-19785921)
chr6 (119-171)||(19878459-19878511)
[»] scaffold1318 (1 HSPs)
scaffold1318 (32-217)||(1865-2051)
[»] chr4 (5 HSPs)
chr4 (1-186)||(16146815-16147000)
chr4 (32-178)||(27906181-27906328)
chr4 (57-168)||(14486601-14486713)
chr4 (119-186)||(53483708-53483775)
chr4 (116-172)||(15408140-15408196)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-217)||(49922-50141)
[»] scaffold0131 (1 HSPs)
scaffold0131 (6-217)||(889-1098)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-176)||(16059-16232)
[»] scaffold1469 (1 HSPs)
scaffold1469 (1-186)||(1242-1425)
[»] scaffold0609 (1 HSPs)
scaffold0609 (13-186)||(5842-6015)
[»] scaffold0127 (1 HSPs)
scaffold0127 (32-217)||(10156-10341)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-182)||(91191-91372)
scaffold0029 (1-182)||(96917-97098)
scaffold0029 (118-171)||(111885-111938)
[»] scaffold0001 (1 HSPs)
scaffold0001 (37-217)||(492981-493162)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-178)||(23562-23740)
[»] scaffold1461 (1 HSPs)
scaffold1461 (63-170)||(1485-1592)
[»] scaffold0249 (1 HSPs)
scaffold0249 (118-186)||(13879-13947)
[»] scaffold0453 (1 HSPs)
scaffold0453 (32-175)||(10546-10689)
[»] scaffold0222 (1 HSPs)
scaffold0222 (32-170)||(16736-16875)
[»] scaffold0183 (1 HSPs)
scaffold0183 (118-182)||(6-70)
[»] scaffold0034 (1 HSPs)
scaffold0034 (32-178)||(73200-73347)
[»] scaffold0720 (1 HSPs)
scaffold0720 (14-187)||(3386-3559)
[»] scaffold0553 (2 HSPs)
scaffold0553 (116-217)||(10148-10250)
scaffold0553 (143-175)||(11079-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (116-217)||(1478-1580)
[»] scaffold0146 (1 HSPs)
scaffold0146 (32-170)||(13548-13687)
[»] scaffold0026 (2 HSPs)
scaffold0026 (116-186)||(111686-111756)
scaffold0026 (116-171)||(11850-11905)
[»] scaffold0099 (1 HSPs)
scaffold0099 (1-169)||(12841-13019)
[»] scaffold0461 (1 HSPs)
scaffold0461 (32-170)||(8-147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (32-170)||(116812-116951)
[»] scaffold2054 (1 HSPs)
scaffold2054 (118-171)||(717-770)
[»] scaffold0483 (1 HSPs)
scaffold0483 (55-170)||(11021-11137)
[»] scaffold0317 (1 HSPs)
scaffold0317 (39-170)||(1309-1441)
[»] scaffold0107 (1 HSPs)
scaffold0107 (116-178)||(40524-40586)
[»] scaffold0020 (1 HSPs)
scaffold0020 (74-170)||(101928-102026)
[»] scaffold0019 (1 HSPs)
scaffold0019 (116-172)||(135474-135530)
[»] scaffold0924 (1 HSPs)
scaffold0924 (116-171)||(750-805)
[»] scaffold0247 (1 HSPs)
scaffold0247 (116-171)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (116-171)||(30858-30913)
[»] scaffold0129 (1 HSPs)
scaffold0129 (119-186)||(45259-45326)
[»] scaffold0235 (1 HSPs)
scaffold0235 (117-178)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (116-172)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (116-168)||(14398-14450)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 9e-94; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12033614 - 12033398
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  12033614 aatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttcccaattttacctt-aag 12033516  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12033515 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacatcaaatc 12033416  T
Q  200 aattcctaggttcatctc 217  Q
    | |||||| |||| ||||    
T  12033415 agttcctaagttcttctc 12033398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 17131617 - 17131834
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag 99  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||    
T  17131617 aatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaag 17131715  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  17131716 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat 17131815  T
Q  199 caattcctaggttcatctc 217  Q
    || |||||| |||| ||||    
T  17131816 cagttcctaagttcttctc 17131834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14865731 - 14865948
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||| || |||||||||||||| |||    
T  14865731 aatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattattttcccaattttacctt-aag 14865829  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaacaaat 198  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  14865830 aacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaat 14865929  T
Q  199 caattcctaggttcatctc 217  Q
    || |||||| |||| ||||    
T  14865930 cagttcctaagttcttctc 14865948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 19235237 - 19235033
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| |||| |||||||||||||| |||    
T  19235237 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttacctt-aag 19235141  T
Q  100 aacagttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaat 198  Q
    ||||||| |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||  || |||||    
T  19235140 aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaaga-taaagtgcagcaaat 19235042  T
Q  199 caattccta 207  Q
    |||||||||    
T  19235041 caattccta 19235033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 13302372 - 13302195
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattat 138  Q
    ||||||| ||| || ||||| || ||||||| |||||| ||||||| |||||| ||| ||||||| | || ||||||||||||||||||||  |||||||    
T  13302372 attcttacaccattcctttcgaagtcatcatcaaccctaaattccccattttatcttcaagaacaatgcatttgattaattttcagaaattacatattat 13302273  T
Q  139 gactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaattcctaggttcatctc 217  Q
    || ||||||||||||||| ||||||||||||||||||| | | | |||| |||| ||||||| ||||||||||||||||    
T  13302272 gattattgaaagataatctcacccttaccttagaattgtaga-aaaaaaacacagcaaatcagttcctaggttcatctc 13302195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 13313028 - 13312851
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattat 138  Q
    ||||||| ||| || ||||| || ||||||| |||||| ||||||| |||||| ||| ||||||| | || |||||||||||||| |||||  |||||||    
T  13313028 attcttacaccattcctttcgaagtcatcatcaaccctaaattccctattttatcttcaagaacaatccatttgattaattttcaaaaattacatattat 13312929  T
Q  139 gactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaattcctaggttcatctc 217  Q
    || ||||||||||||||| ||||||||||||||||||| | | | |||| |||| ||||||| ||||||||||||||||    
T  13312928 gattattgaaagataatctcacccttaccttagaattgtaga-aaaaaaacacagcaaatcagttcctaggttcatctc 13312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 13323920 - 13323782
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatatta 137  Q
    ||||||| ||| || ||||| || ||||||| |||||| |||||||||||||| ||| ||||||| |  |||| ||||||||||||||||||  ||||||    
T  13323920 attcttacaccattcctttcgaagtcatcatcaaccctaaattcccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatatta 13323821  T
Q  138 tgactattgaaagataatcccacccttaccttagaattg 176  Q
    ||| ||||||||||||||| |||||||||||||||||||    
T  13323820 tgattattgaaagataatctcacccttaccttagaattg 13323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 51301550 - 51301659
Alignment:
Q  77 taattcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    |||||||||||||||   | | ||||| |||||||||||||||||||||||||  ||||||||| ||||| ||||||||| |||||||||||||||||||    
T  51301550 taattcccaattttattctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattg 51301649  T
Q  177 caaagacaaa 186  Q
    | ||||||||    
T  51301650 cgaagacaaa 51301659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 10389502 - 10389428
Alignment:
Q  112 gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    ||||| |||||||||||| || ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10389428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 10414591 - 10414517
Alignment:
Q  112 gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    ||||| |||||||||||| || ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 10421261 - 10421187
Alignment:
Q  112 gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    ||||| |||||||||||| || ||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 23370560 - 23370458
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcat 214  Q
    |||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||| | |||| ||||||||| ||||||  |||||| |||| |    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  215 ctc 217  Q
    |||    
T  23370460 ctc 23370458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 17240554  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     | ||||| || |||||| ||||| || |||||||||||||    
T  17240553 atgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 24933880 - 24933823
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    ||||||||||| || ||||||| |||||| ||||| || |||||||||||||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 24933823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 18929161 - 18929300
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaa-tcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || ||||||||| ||| ||| |||||| ||| |||||||||| ||  ||||||| |  | || ||| ||||||||||||||    
T  18929161 aaacatgattcttacaccattcctttcaaaaatcagcatgaaccct-aatccccaattttatctcgaagaacaatatacttagatcaattttcagaaatt 18929259  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     ||||| |||| |||||| ||||| || |||||||||||||    
T  18929260 atatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 10555353 - 10555402
Alignment:
Q  158 cacccttaccttagaattgcaaagacaaaagcacaacaaatcaattccta 207  Q
    ||||||||||||||||||| ||| ||||||| || |||||||||| ||||    
T  10555353 cacccttaccttagaattgtaaacacaaaagtacgacaaatcaatcccta 10555402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacct 168  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacct 168  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 20906630 - 20906446
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20906630 aatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacc-ttaaga 20906532  T
Q  101 acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20906531 atagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaaa 20906446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16090960 - 16091178
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    |||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| | |    
T  16090960 aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttacctt-agg 16091058  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa 197  Q
    ||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||    
T  16091059 aacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaa 16091158  T
Q  198 tcaattcctaggttcatctc 217  Q
    ||| |||||| |||| ||||    
T  16091159 tcagttcctaagttcttctc 16091178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 29181279 - 29181061
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaa-ttttacctttaag 99  Q
    |||||||||||||||  || |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||| |||    
T  29181279 aatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttacctt-aag 29181181  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa 197  Q
    || |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||    
T  29181180 aatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaa 29181081  T
Q  198 tcaattcctaggttcatctc 217  Q
    ||| |||||| |||| ||||    
T  29181080 tcagttcctaagttcttctc 29181061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 80 - 217
Target Start/End: Original strand, 2971219 - 2971356
Alignment:
Q  80 ttcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa 179  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2971219 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttaccttagaattgcaa 2971317  T
Q  180 agac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    |||| ||||||||| ||||||| |||||| |||| ||||    
T  2971318 agacaaaaagcacagcaaatcagttcctaagttcttctc 2971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2966850 - 2966926
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966850 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 2465248 - 2465427
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| | |||||||||||  |  ||| |    
T  2465248 aatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataaaa 2465345  T
Q  101 acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 182  Q
    |||||| ||||| |||||||||||||||  |||||||| | ||||||| ||| |||||||||||||||||||||||||||||    
T  2465346 acagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaaga 2465427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 3857534 - 3857357
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt---accttta 97  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| | |||||||||||   ||| | |    
T  3857534 aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttttaccataa 3857437  T
Q  98 agaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa 179  Q
    | ||||||| ||||| |||||||||||||||  |||||||| | ||||||| ||| ||||||||||||||||||||||||||    
T  3857436 a-aacagttaaattgcttaattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgcaa 3857357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 14319768 - 14319582
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg 130  Q
    |||| ||||||||| |||||| ||||||||||||   | |  || |||||| |||||||| ||| ||||||  |||  || ||||||||||||||||||     
T  14319768 aaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttagattaattttcagaaatta 14319670  T
Q  131 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    || ||||  |  ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |||||| |||| ||||    
T  14319669 tacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc 14319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 14230679 - 14230878
Alignment:
Q  14 atcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-g 112  Q
    |||||| ||||||||   |||| ||||||||| |||||| ||||||||||||   | |  || |||||| |||||||| ||| ||||||  |||  || |    
T  14230679 atcaaattacaacatattaaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttag 14230777  T
Q  113 attaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggtt 211  Q
    ||||||||||||||||| || ||||     ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||| |||    
T  14230778 attaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagtt 14230877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 31155396 - 31155464
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 31155464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 13679416 - 13679548
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatatta 137  Q
    ||||||| ||| || |||||||||||| ||| || || |||||| || ||||| | | ||||||| || |||| ||| |||||||| ||||| ||||| |    
T  13679416 attcttacaccattcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatca 13679515  T
Q  138 tgactattgaaagataatcccacccttacctta 170  Q
    |||  ||||||||||| || |||||||||||||    
T  13679516 tgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| |||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| |||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||||||||||| |||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga 172  Q
    |||||||||||||| ||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20851302 - 20851085
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||| |||    
T  20851302 aatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aag 20851204  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  20851203 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat 20851104  T
Q  199 caattcctaggttcatctc 217  Q
    || |||||| |||| ||||    
T  20851103 cagttcctaagttcttctc 20851085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 20857926 - 20857712
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac 102  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  20857926 catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaac 20857828  T
Q  103 agttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaa 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  20857827 agttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcag 20857728  T
Q  202 ttcctaggttcatctc 217  Q
    |||||| |||| ||||    
T  20857727 ttcctaagttcttctc 20857712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 21706164 - 21706378
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaac 102  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||    
T  21706164 catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaagaac 21706262  T
Q  103 agttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaa 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  21706263 agttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcag 21706362  T
Q  202 ttcctaggttcatctc 217  Q
    |||||| |||| ||||    
T  21706363 ttcctaagttcttctc 21706378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21710704 - 21710920
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag 99  Q
    ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| || |||||||||||||| |||||    
T  21710704 aatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttcccaattttacc-ttaag 21710801  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  21710802 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat 21710901  T
Q  199 caattcctaggttcatctc 217  Q
    || |||||| |||| ||||    
T  21710902 cagttcctaagttcttctc 21710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 18712715 - 18712854
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||||  ||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  18712715 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctaaatttttaatttcaagaacaattcaattagatcaattttcagaaatt 18712813  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || ||||| |||||||    
T  18712814 atatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 20045004 - 20044946
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    ||||||||| || ||||||| ||  |||||| |||||||||||||||||||||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattg 20044946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 32651516 - 32651627
Alignment:
Q  60 aaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcc 157  Q
    |||||| ||| |||||| |||||||||||||   ||| |||||||  |||||| ||| |||||||||||||| |||| ||||| |||||| ||||| ||     
T  32651516 aaatcagcatcaaccct-aattcccaatttttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtct 32651614  T
Q  158 cacccttacctta 170  Q
    |||||||||||||    
T  32651615 cacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 135324 - 135530
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  135324 aatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaattctcaattttacctttaaga 135422  T
Q  101 acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaacaaatc 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||||    
T  135423 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagacaaatagcacagcaaatc 135522  T
Q  200 aattccta 207  Q
    | ||||||    
T  135523 agttccta 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 24320840 - 24320623
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| |||| |||||||||||||| |||    
T  24320840 aatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aag 24320742  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  24320741 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat 24320642  T
Q  199 caattcctaggttcatctc 217  Q
    || |||||| |||| ||||    
T  24320641 cagttcctaagttcttctc 24320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 29643497 - 29643386
Alignment:
Q  60 aaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatccc 158  Q
    |||||||||| |||||||||||| |||||||| ||| | ||||| ||||||| ||||||||||||||||||  ||||||||| ||||||||||||||| |    
T  29643497 aaatcatcatcaacccttaattctcaattttatcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctc 29643398  T
Q  159 acccttacctta 170  Q
    ||||||||||||    
T  29643397 acccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 18614195 - 18614327
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattg-attaattttcagaaattgtatatta 137  Q
    ||||||| ||| || ||||| |||||| ||| || || |||||| |||||||| ||| ||||||| |||||||| || |||||||||||||| ||||| |    
T  18614195 attcttacaccattcctttctaaatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatca 18614294  T
Q  138 tgactattgaaagataatcccacccttacctta 170  Q
    ||| |||||| ||||| || |||||||||||||    
T  18614295 tgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 23482094  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || |||||||||||||    
T  23482093 atatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 44477623 - 44477693
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||||||||  ||||||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaa 44477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 44492781 - 44492851
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||||||||  ||||||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaa 44492851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacct 168  Q
    |||||||||||||| || ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 19236799 - 19237002
Alignment:
Q  15 tcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattga 113  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||    
T  19236799 tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaagaacagttcaattga 19236897  T
Q  114 ttaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttc 212  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  19236898 ttaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttc 19236997  T
Q  213 atctc 217  Q
     ||||    
T  19236998 ttctc 19237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 22461044 - 22461258
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac 102  Q
    |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||||||||||| ||||||    
T  22461044 catactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttacctt-aagaac 22461141  T
Q  103 agttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaa-gcacaacaaatca 200  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  22461142 agttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatca 22461241  T
Q  201 attcctaggttcatctc 217  Q
     ||| || |||| ||||    
T  22461242 gttcttaagttcttctc 22461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 22467668 - 22467882
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac 102  Q
    |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||||||||||| ||||||    
T  22467668 catactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttacctt-aagaac 22467765  T
Q  103 agttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaa-gcacaacaaatca 200  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  22467766 agttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatca 22467865  T
Q  201 attcctaggttcatctc 217  Q
     ||| || |||| ||||    
T  22467866 gttcttaagttcttctc 22467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20772856 - 20773059
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag 99  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| || |||||||||||||| |||||    
T  20772856 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttacc-ttaag 20772952  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    ||||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||    
T  20772953 aacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaaga-taaagtacagcaaatc 20773051  T
Q  200 aattccta 207  Q
    ||||||||    
T  20773052 aattccta 20773059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20781631 - 20781834
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag 99  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| || |||||||||||||| |||||    
T  20781631 aatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttacc-ttaag 20781727  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    ||||||| |||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||    
T  20781728 aacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaaga-taaagtacagcaaatc 20781826  T
Q  200 aattccta 207  Q
    ||||||||    
T  20781827 aattccta 20781834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 24930097 - 24929917
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| |||| |||||||||||||| |||    
T  24930097 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaattttacctt-aag 24930001  T
Q  100 aacagttcaattgattaattttc-agaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 182  Q
    ||||||| ||||||||||||||  ||||||  |||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  24930000 aacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaaga 24929917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28909458 - 28909243
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| | || |||||||||  | |||||    
T  28909458 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28909361  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    |||| || ||| | |||||||||||||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||    
T  28909360 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaagcacagcaaatc 28909261  T
Q  200 aattcctaggttcatctc 217  Q
    ||||||||||||| ||||    
T  28909260 aattcctaggttcttctc 28909243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28945853 - 28945638
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| | || |||||||||  | |||||    
T  28945853 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28945756  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    |||| || ||| | |||||||||||||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||    
T  28945755 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaagcacagcaaatc 28945656  T
Q  200 aattcctaggttcatctc 217  Q
    ||||||||||||| ||||    
T  28945655 aattcctaggttcttctc 28945638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  2 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaa 101  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| | || ||||||||||||| |||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttccaattttacctt-aagaa 20820201  T
Q  102 cagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa 179  Q
    | ||| ||||  |||||  ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  2 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaa 101  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| | || ||||||||||||| |||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttccaattttacctt-aagaa 20827301  T
Q  102 cagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa 179  Q
    | ||| ||||  |||||  ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28896210 - 28895995
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| | || |||||||||  | |||||    
T  28896210 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28896113  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    |||| || ||| | |||||||||||||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  28896112 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaaagcacagcaaatc 28896013  T
Q  200 aattcctaggttcatctc 217  Q
    ||||||||||||| ||||    
T  28896012 aattcctaggttcttctc 28895995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28925036 - 28924821
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| | || |||||||||  | |||||    
T  28925036 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28924939  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    |||| || ||| | |||||||||||||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  28924938 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaaagcacagcaaatc 28924839  T
Q  200 aattcctaggttcatctc 217  Q
    ||||||||||||| ||||    
T  28924838 aattcctaggttcttctc 28924821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28889506 - 28889291
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| | || |||||||||  | |||||    
T  28889506 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28889409  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc 199  Q
    |||| || ||| | |||||||||||||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||   ||||||    
T  28889408 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaaagcaatgcaaatc 28889309  T
Q  200 aattcctaggttcatctc 217  Q
    ||||||||||||| ||||    
T  28889308 aattcctaggttcttctc 28889291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 34829970 - 34830146
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| |  || |||||| |||||||| ||| ||||    
T  34829970 aatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctcaattttatcttcaaga 34830068  T
Q  101 acagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||  ||| ||| |||| ||||||||||||| || ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830069 actattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 18407985  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||||||||| |||||| ||||| || |||||||||||||    
T  18407984 atatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  23111339 aaacatgattcttacaccatccctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 23111241  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || |||||||||||||    
T  23111240 atatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga 172  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 38144591 - 38144536
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9221 - 9396
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||||||| ||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9221 aatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaattcccaattttacttttaaga 9320  T
Q  101 acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9321 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 7e-73; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25181099 - 25180882
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| |||| |||||||||||||| |||    
T  25181099 aatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aag 25181001  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  25181000 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat 25180901  T
Q  199 caattcctaggttcatctc 217  Q
    || |||||| |||| ||||    
T  25180900 cagttcctaagttcttctc 25180882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10462 - 10669
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag 99  Q
    ||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| || |||||||||||||| |||||    
T  10462 aatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaag 10560  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat 198  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  10561 aacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaaagacaaaaagcacagcaaat 10660  T
Q  199 caattccta 207  Q
    || ||||||    
T  10661 cagttccta 10669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 26885103 - 26885284
Alignment:
Q  37 tgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatat 135  Q
    ||||||||| ||||||||||||||||| | |||||  || |||||| |||||||  ||  ||||||  ||| ||| |||||||||||||||||| || ||    
T  26885103 tgattcttacaccttttctttcaaaattagcattataccctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacat 26885202  T
Q  136 tatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    || || ||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||  |||||| |||| ||||    
T  26885203 ta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagttcttctc 26885284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 27207858 - 27207672
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg 130  Q
    |||| ||||||||| |||||| ||||||||||||   | |  || |||||| |||||||| ||| ||||||  |||  || ||||||||||||||||||     
T  27207858 aaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttagattaattttcagaaatta 27207760  T
Q  131 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    || ||||  |  ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |||||| |||| ||||    
T  27207759 tacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc 27207672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 23168351 - 23168272
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaa 197  Q
    |||||||||||| || |||||||  | |||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaaagcacagcaaa 23168272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 23579608 - 23579529
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaa 197  Q
    |||||||||||| || |||||||  | |||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaaagcacagcaaa 23579529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||||| |||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctcaatttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||||| |||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctcaatttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 5706075 - 5706008
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||| |||| || ||||||| || ||| ||||| || |||||||||||||||||||| ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaa 5706008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| ||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 27366566 - 27366533
Alignment:
Q  153 aatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||| |||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaa 27366533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 79660 - 79442
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    |||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||    
T  79660 aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aag 79562  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa 197  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||    
T  79561 aacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaa 79462  T
Q  198 tcaattcctaggttcatctc 217  Q
    ||| |||||| |||| ||||    
T  79461 tcagttcctaagttcttctc 79442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 4e-71; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 20008114 - 20007900
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac 102  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  20008114 catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaac 20008016  T
Q  103 agttcaattgattaa-ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaa 201  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |     
T  20008015 agttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgcaaagacaaaagcacagcaaatgag 20007916  T
Q  202 ttcctaggttcatctc 217  Q
    |||||| |||| ||||    
T  20007915 ttcctaagttcttctc 20007900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 9099240 - 9099036
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| |||| |||||||||||||| |||    
T  9099240 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttacctt-aag 9099144  T
Q  100 aacagttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaat 198  Q
    ||||||| |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||  || |||||    
T  9099143 aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaaga-taaagtgcagcaaat 9099045  T
Q  199 caattccta 207  Q
    |||||||||    
T  9099044 caattccta 9099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21364648 - 21364436
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| | |||||||||||||| | ||      
T  21364648 aatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaatttcccaattttaccataaa-- 21364553  T
Q  101 acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatca 200  Q
    |||||| ||||| |||||||||||||||  |||||||| | || |||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||    
T  21364552 acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaaagcacagcaaaaca 21364453  T
Q  201 attcctaggttcatctc 217  Q
    |||||||||||| ||||    
T  21364452 attcctaggttcttctc 21364436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23968630 - 23968418
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| | |||||||||||||| | ||      
T  23968630 aatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaatttcccaattttaccataaa-- 23968535  T
Q  101 acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatca 200  Q
    |||||| ||||| |||||||||||||||  |||||||| | || |||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||    
T  23968534 acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaaagcacagcaaaaca 23968435  T
Q  201 attcctaggttcatctc 217  Q
    |||||||||||| ||||    
T  23968434 attcctaggttcttctc 23968418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 31252357 - 31252493
Alignment:
Q  51 tttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaa 149  Q
    ||||||||||||||| | | |  || |||||| |||||||| ||| ||||||  ||||||| |||||||||||||||||| |||||||| |  ||| |||    
T  31252357 tttctttcaaaatcagcctcataccctaattctcaattttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaa 31252456  T
Q  150 gataatcccacccttaccttagaattgcaaagacaaa 186  Q
    ||||||| |||||||||||||||||||||||||||||    
T  31252457 gataatctcacccttaccttagaattgcaaagacaaa 31252493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 15458492 - 15458560
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 15465087 - 15465155
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 11288721 - 11288647
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcaca 192  Q
    |||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaaaaacaca 11288647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||| ||||||| || ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 34640041 - 34639971
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||||| || |||| || |||||| ||||| || |||||||||||||||||||| ||||||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaa 34639971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 34646715 - 34646645
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||||| || |||| || |||||| ||||| || |||||||||||||||||||| ||||||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaa 34646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 9187410 - 9187550
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt-acctttaagaacagttcaatt-gat-taattttcagaaat 128  Q
    |||| ||||||||| | | || |||||||||||| ||| |||||| ||||||||||||| |  || ||||||| ||||||| ||| || |||||||||||    
T  9187410 aaacatgattcttacatcattcctttcaaaatcagcatcaaccct-aattcccaatttttatattcaagaacaattcaattagatctatttttcagaaat 9187508  T
Q  129 tgtatattatgactattgaaagataatcccacccttacctta 170  Q
    | | ||||| || |||||| ||||| || |||||||||||||    
T  9187509 tatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 28288537 - 28288488
Alignment:
Q  143 attgaaagataatcccacccttaccttagaattgcaaagacaaaagcaca 192  Q
    ||||| ||||| || |||||||||||||||||||||||||||||| ||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaaaaacaca 28288488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||||||||||| |||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 24563475 - 24563508
Alignment:
Q  153 aatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||| |||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaa 24563508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 2051 - 1865
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgt 131  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaattcccaattttactttcaagaacagttcaattgattaattttcagaaattat 1952  T
Q  132 atattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||  |||||| |||| ||||    
T  1951 atattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 16147000 - 16146815
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaa-ttttacctttaag 99  Q
    |||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||| |||    
T  16147000 aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttacctt-aag 16146902  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146901 aacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 16146815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 27906181 - 27906328
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattg-attaattttcagaaattg 130  Q
    |||| ||||||||| ||||||||||||||||||| ||| |  || |||||| |||||||| ||| ||||||  ||| |||  |||||||||||||||||     
T  27906181 aaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctcaattttatcttcaagaactattctattatattaattttcagaaatta 27906280  T
Q  131 tatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    || |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906281 tacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  57 tcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataat 155  Q
    ||||||||||||| ||||||  ||||||||||||| ||| ||||||| ||||||| |||||||||||||||||| ||||||||||  |||||| |||| |    
T  14486601 tcaaaatcatcatcaaccctatattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagt 14486700  T
Q  156 cccacccttacct 168  Q
    | |||||||||||    
T  14486701 ctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 53483708 - 53483775
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||| |||| || ||||||| |||||| ||||| || |||||||||||||||||||| ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaa 53483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga 172  Q
    |||||||||||||| |||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 50141 - 49922
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||| |  || || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||  | |||||    
T  50141 aatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaatttttaccttaag 50042  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa 197  Q
    ||||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  50041 aacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacaacaaaa 49942  T
Q  198 tcaattcctaggttcatctc 217  Q
    ||| |||||| |||| ||||    
T  49941 tcagttcctaagttcttctc 49922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 217
Target Start/End: Original strand, 889 - 1098
Alignment:
Q  6 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacag 104  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| | || |||||||||||| | ||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccat-aagaacag 985  T
Q  105 ttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaattc 204  Q
    || ||||| |||||||||||||||  |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  986 ttaaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaaaagcacagcaaatcaattc 1085  T
Q  205 ctaggttcatctc 217  Q
    |||||||| ||||    
T  1086 ctaggttcttctc 1098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16232 - 16059
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| |||||| | ||||| ||| || |    
T  16232 aatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaattccaatttttatcttaaa-a 16136  T
Q  101 acagttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    |||||| |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  16135 acagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattg 16059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 1242 - 1425
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag 99  Q
    ||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| | || |||||||||||||| |||    
T  1242 aatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaattttacctt-aag 1338  T
Q  100 aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    ||||||| ||||| ||||||||||||||   |||||||  |||||||||||  ||||||||||||||||||||||||||||||||||    
T  1339 aacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 6015 - 5842
Alignment:
Q  13 catcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt- 111  Q
    ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | |  || |||||| |||||||| ||| ||||||  |||||||     
T  6015 catcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctcaattttatcttcaagaactattcaatta 5917  T
Q  112 gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  5916 gattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 5842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 10156 - 10341
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgt 131  Q
    |||| ||||||||| ||| |  |||||||||| | ||| |||||| ||||||||||||||   | | ||||| |||||||||||||||||||||||||      
T  10156 aaacatgattcttacaccatccctttcaaaattagcatcaaccct-aattcccaattttattctcatgaacaattcaattgattaattttcagaaattac 10254  T
Q  132 atattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| | |||| ||||||||| ||||||  |||||| |||| ||||    
T  10255 atattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctc 10341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 91372 - 91191
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt---accttta 97  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| | |||||||||||   ||| | |    
T  91372 aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttttaccataa 91275  T
Q  98 agaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 182  Q
    | ||||||| ||||| |||||||||||||||  |||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  91274 a-aacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga 91191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 97098 - 96917
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt---accttta 97  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| | |||||||||||   ||| | |    
T  97098 aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttttaccataa 97001  T
Q  98 agaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 182  Q
    | ||||||| ||||| |||||||||||||||  |||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  97000 a-aacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga 96917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 217
Target Start/End: Complemental strand, 493162 - 492981
Alignment:
Q  37 tgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatat 135  Q
    ||||||||| ||||||||||||||||||| |||||  || |||||| | |||||| ||  ||||||  ||| ||| |||||||||||||||||| || ||    
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctctattttatctccaagaactattccattagattaattttcagaaattatacat 493063  T
Q  136 tatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc 217  Q
    || || ||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||  |||||| |||| ||||    
T  493062 ta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctc 492981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 23740 - 23562
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga 100  Q
    ||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| |  || |||||| |||||||  ||| ||||    
T  23740 aatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctcaattttgtcttcaaga 23641  T
Q  101 acagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||  |||  || |||||||||||||||||| || |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23640 actattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 1592 - 1485
Alignment:
Q  63 tcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacc 161  Q
    ||||||||||||||||||||||||||||| ||||| |||||   ||||| ||||||||||||||||||| |||||| ||  |||| ||||||||| ||||    
T  1592 tcatcattaacccttaattcccaattttatctttatgaacaac-caattagattaattttcagaaattgcatattaagatcattgcaagataatctcacc 1494  T
Q  162 cttacctta 170  Q
    |||||||||    
T  1493 cttacctta 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 13947 - 13879
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 10689 - 10546
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg 130  Q
    |||| ||||||||| |||||| |||||||||||| | | |  || |||||| |||||||| ||| ||||||  ||| ||| ||||||||||||||||||     
T  10689 aaacatgattcttacaccttt-ctttcaaaatcagcctcataccctaattctcaattttatcttcaagaactattctattagattaattttcagaaatta 10591  T
Q  131 tatattatgactattgaaagataatcccacccttaccttagaatt 175  Q
    || |||| ||  |||||||||||||||||| ||||||||||||||    
T  10590 tacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 16834  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || |||||||||||||    
T  16835 atatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 6 - 70
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga 182  Q
    |||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaaga 70  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 73200 - 73347
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg 130  Q
    |||| ||||||||| ||| ||||||||||||||| ||| |  || |||||| |||||||| ||| |||| |  | | ||| |||||||||||| |||||     
T  73200 aaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctcaattttatcttcaagagctatcctattagattaattttcataaatta 73299  T
Q  131 tatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    || |||||||  |||||||||||||||||||||||||| | |||||||    
T  73300 tacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 3559 - 3386
Alignment:
Q  14 atcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-g 112  Q
    |||||| ||||||||   |||| ||||||||| |||||| ||||||||||||   | |  || |||||| |||||||| ||| ||||||  |||  || |    
T  3559 atcaaattacaacatattaaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttag 3461  T
Q  113 attaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaa 187  Q
    ||||||||||||||||| |||||||     |||||||||||||  ||||||||||||||||||||||||||||||    
T  3460 attaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaa 3386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 10250 - 10148
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcat 214  Q
    |||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||| | |||| ||||||||| ||||||  |||||| |||| |    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  215 ctc 217  Q
    |||    
T  10150 ctc 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 11111 - 11079
Alignment:
Q  143 attgaaagataatcccacccttaccttagaatt 175  Q
    |||||| ||||||||||||||||||||||||||    
T  11111 attgaaggataatcccacccttaccttagaatt 11079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 1580 - 1478
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcat 214  Q
    |||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||| | |||| ||||||||| ||||||  |||||| |||| |    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  215 ctc 217  Q
    |||    
T  1480 ctc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 13646  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     | ||||| || |||||| ||||| || |||||||||||||    
T  13647 atgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 111686 - 111756
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||||||||||| ||||||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaa 111756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12841 - 13019
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttaatt--cccaatttt-acctt 95  Q
    |||||||||||||||  || |||||||||| |||||| ||||||||   | |||| |||| |||||| |||||||||| ||||  ||||||||| |||||    
T  12841 aatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatttttacctt 12940  T
Q  96 taagaacagttcaatt---gattaattttc-agaaattgtatattatgactattg-aaagataatcccacccttacctt 169  Q
    ||||||||||| || |   ||||||||||  ||||||  |||||||  ||||||| |||||||||||||||||||||||    
T  12941 taagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||  |||||| |||||||||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  147 aaacatgattcttacaccattcctttcaaaatcagcaacaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt 49  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     | ||||| || |||||| ||||| || |||||||||||||    
T  48 atgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 116812 - 116951
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt 129  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||||  ||||||   ||| ||||||| ||||||| ||| ||||||||||||||    
T  116812 aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctaaatttttattttcaagaacaattcaattagatcaattttcagaaatt 116910  T
Q  130 gtatattatgactattgaaagataatcccacccttacctta 170  Q
     |||| ||||| |||||| ||||| || |||||||||||||    
T  116911 atatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 717 - 770
Alignment:
Q  118 ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||| ||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 11137 - 11021
Alignment:
Q  55 tttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaa-ttgtatattatgactattgaaagat 152  Q
    ||||||| ||||||| |||||||||| |||||||||| | ||| |||||   ||||| |||||||||||||||| ||| |||||| ||  |||| |||||    
T  11137 tttcaaagtcatcatcaacccttaatccccaattttatccttatgaacaaa-caattagattaattttcagaaaattgcatattaagatcattgcaagat 11039  T
Q  153 aatcccacccttacctta 170  Q
    |||| |||||||||||||    
T  11038 aatctcacccttacctta 11021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 1309 - 1441
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatatta 137  Q
    ||||||| ||| || |||||||||||| ||| || || |||||| || ||||| | | ||||||| || |||| ||| |||||||| ||||| ||||| |    
T  1309 attcttacaccattcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatca 1408  T
Q  138 tgactattgaaagataatcccacccttacctta 170  Q
    |||  ||||||||||| || |||||||||||||    
T  1409 tgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 40586 - 40524
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||||||||||| |||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40586 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 102026 - 101928
Alignment:
Q  74 ccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||||||   ||| ||||||| ||||||| ||| ||||||||| |||| |||| ||||| |||||| ||||| || |||||||||||||    
T  102026 ccttaattcccaatttttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 135474 - 135530
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga 172  Q
    |||||||||||||| |||| ||||| |||||| ||||| || |||||||||||||||    
T  135474 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 45326 - 45259
Alignment:
Q  119 tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 186  Q
    |||||| |||| || ||||||| |||||| ||||| || ||||||||||||||| |||| ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaa 45259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 22646 - 22585
Alignment:
Q  117 attttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||||||||||||| |||| ||||| |||||| ||||| || |||||||||||| || |||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgca 22585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga 172  Q
    |||||||||||||| || ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  116 aattttcagaaattgtatattatgactattgaaagataatcccacccttacct 168  Q
    |||||||||||||| || ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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