View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0304_high_9 (Length: 289)

Name: NF0304_high_9
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0304_high_9
NF0304_high_9
[»] chr4 (44 HSPs)
chr4 (13-205)||(29180463-29180656)
chr4 (13-205)||(30776535-30776728)
chr4 (13-205)||(30777363-30777556)
chr4 (13-205)||(39970040-39970233)
chr4 (13-205)||(10591554-10591746)
chr4 (13-205)||(52712939-52713132)
chr4 (13-168)||(53677530-53677686)
chr4 (13-168)||(49901939-49902096)
chr4 (13-168)||(3043218-3043374)
chr4 (13-206)||(43980374-43980567)
chr4 (13-165)||(32012378-32012531)
chr4 (17-165)||(50768361-50768510)
chr4 (13-205)||(37788327-37788520)
chr4 (13-206)||(55937754-55937948)
chr4 (13-205)||(9798126-9798319)
chr4 (13-165)||(38940785-38940938)
chr4 (13-168)||(1619942-1620098)
chr4 (13-165)||(38187777-38187930)
chr4 (13-205)||(29899591-29899784)
chr4 (13-154)||(51495079-51495218)
chr4 (13-120)||(47807157-47807264)
chr4 (23-165)||(27750409-27750552)
chr4 (17-165)||(30012009-30012157)
chr4 (19-131)||(5234059-5234171)
chr4 (39-165)||(5222370-5222502)
chr4 (30-119)||(23978210-23978298)
chr4 (30-165)||(37911804-37911941)
chr4 (31-165)||(8178335-8178470)
chr4 (56-165)||(46070641-46070753)
chr4 (31-165)||(47516287-47516423)
chr4 (36-165)||(8013190-8013321)
chr4 (30-119)||(28142717-28142804)
chr4 (29-162)||(32410252-32410386)
chr4 (56-119)||(28318538-28318600)
chr4 (17-165)||(40553690-40553839)
chr4 (31-97)||(17799230-17799296)
chr4 (30-101)||(5064750-5064821)
chr4 (49-119)||(38140826-38140896)
chr4 (33-94)||(7652121-7652182)
chr4 (53-154)||(17236342-17236446)
chr4 (125-168)||(47806811-47806855)
chr4 (36-119)||(40411070-40411152)
chr4 (38-119)||(49080224-49080306)
chr4 (55-165)||(53848387-53848499)
[»] chr2 (39 HSPs)
chr2 (13-205)||(792440-792633)
chr2 (13-205)||(21539636-21539829)
chr2 (17-205)||(29514107-29514296)
chr2 (17-198)||(29514563-29514744)
chr2 (13-205)||(4033759-4033952)
chr2 (13-168)||(5091624-5091782)
chr2 (22-170)||(28424188-28424337)
chr2 (17-205)||(43075629-43075818)
chr2 (13-170)||(14565457-14565616)
chr2 (13-170)||(35832326-35832484)
chr2 (13-206)||(28492398-28492592)
chr2 (13-165)||(33635255-33635408)
chr2 (13-168)||(8784311-8784467)
chr2 (13-165)||(38549727-38549880)
chr2 (13-162)||(10478097-10478250)
chr2 (13-160)||(44803823-44803970)
chr2 (13-165)||(4091929-4092083)
chr2 (59-168)||(15858740-15858850)
chr2 (37-154)||(22162249-22162368)
chr2 (17-118)||(43451472-43451573)
chr2 (17-165)||(18833998-18834149)
chr2 (13-137)||(9294603-9294727)
chr2 (13-165)||(15068665-15068807)
chr2 (13-118)||(13822854-13822959)
chr2 (30-144)||(20380067-20380182)
chr2 (30-165)||(26998239-26998376)
chr2 (30-165)||(44442055-44442190)
chr2 (78-162)||(10979114-10979198)
chr2 (30-165)||(32273593-32273730)
chr2 (30-165)||(38070918-38071054)
chr2 (30-119)||(9709485-9709572)
chr2 (30-119)||(32010073-32010161)
chr2 (13-57)||(10979197-10979241)
chr2 (62-144)||(38071571-38071658)
chr2 (37-119)||(4891747-4891828)
chr2 (50-119)||(8032790-8032858)
chr2 (31-165)||(11031025-11031161)
chr2 (41-102)||(12872107-12872168)
chr2 (55-119)||(33933045-33933109)
[»] chr1 (46 HSPs)
chr1 (13-205)||(18852102-18852295)
chr1 (13-205)||(44875058-44875251)
chr1 (17-205)||(43656129-43656317)
chr1 (13-205)||(15285683-15285875)
chr1 (17-168)||(25990664-25990816)
chr1 (13-205)||(40219936-40220128)
chr1 (17-205)||(46949200-46949389)
chr1 (20-205)||(26907184-26907370)
chr1 (13-206)||(29488626-29488820)
chr1 (13-165)||(18036464-18036616)
chr1 (13-206)||(9127921-9128115)
chr1 (17-168)||(23873919-23874071)
chr1 (17-168)||(28017574-28017726)
chr1 (13-165)||(31970397-31970549)
chr1 (17-205)||(38942533-38942722)
chr1 (17-168)||(28916607-28916759)
chr1 (13-205)||(40935701-40935894)
chr1 (13-198)||(26479625-26479811)
chr1 (13-165)||(40960562-40960715)
chr1 (13-154)||(47996884-47997026)
chr1 (17-168)||(35941757-35941909)
chr1 (17-170)||(35189114-35189269)
chr1 (13-198)||(45357964-45358150)
chr1 (13-165)||(49924338-49924491)
chr1 (13-162)||(4529109-4529259)
chr1 (13-162)||(39026334-39026484)
chr1 (13-168)||(6848394-6848548)
chr1 (23-160)||(18913444-18913582)
chr1 (13-144)||(15311119-15311249)
chr1 (17-162)||(36383850-36383996)
chr1 (17-168)||(35884138-35884279)
chr1 (13-172)||(44056386-44056547)
chr1 (30-117)||(25185406-25185492)
chr1 (30-121)||(44510321-44510411)
chr1 (30-114)||(7397682-7397765)
chr1 (36-119)||(16661486-16661569)
chr1 (36-119)||(15912169-15912251)
chr1 (31-119)||(5858474-5858561)
chr1 (31-119)||(41063712-41063799)
chr1 (30-83)||(13351686-13351739)
chr1 (55-119)||(35366330-35366393)
chr1 (46-102)||(37192870-37192926)
chr1 (30-83)||(45840167-45840220)
chr1 (50-102)||(5950426-5950478)
chr1 (55-119)||(37538780-37538843)
chr1 (30-82)||(37735485-37735537)
[»] chr8 (50 HSPs)
chr8 (13-205)||(35259939-35260132)
chr8 (13-205)||(37597952-37598145)
chr8 (13-206)||(24612566-24612760)
chr8 (13-168)||(27621049-27621205)
chr8 (13-206)||(44411295-44411490)
chr8 (13-165)||(44052542-44052696)
chr8 (13-205)||(3099834-3100028)
chr8 (13-205)||(11043939-11044132)
chr8 (13-165)||(27752508-27752661)
chr8 (13-168)||(35344285-35344442)
chr8 (13-205)||(36537940-36538133)
chr8 (13-206)||(32678595-32678789)
chr8 (17-172)||(25321676-25321832)
chr8 (17-160)||(39187159-39187304)
chr8 (13-168)||(35346390-35346546)
chr8 (13-144)||(44358577-44358708)
chr8 (13-168)||(11992646-11992803)
chr8 (13-206)||(33851109-33851303)
chr8 (13-144)||(37567517-37567648)
chr8 (17-205)||(12108049-12108240)
chr8 (13-117)||(31133115-31133219)
chr8 (13-105)||(34713511-34713603)
chr8 (19-115)||(2238685-2238781)
chr8 (19-118)||(24510787-24510886)
chr8 (19-102)||(41426325-41426408)
chr8 (30-119)||(25195149-25195237)
chr8 (30-165)||(8673302-8673438)
chr8 (30-117)||(17336713-17336799)
chr8 (56-122)||(40487794-40487859)
chr8 (30-119)||(41362410-41362498)
chr8 (14-85)||(16643386-16643457)
chr8 (30-119)||(17314799-17314887)
chr8 (30-119)||(41791563-41791651)
chr8 (58-165)||(17713143-17713252)
chr8 (33-119)||(34899894-34899979)
chr8 (108-168)||(31133765-31133826)
chr8 (43-165)||(16635361-16635488)
chr8 (55-119)||(28497641-28497704)
chr8 (59-141)||(16635786-16635871)
chr8 (55-165)||(26954520-26954632)
chr8 (43-154)||(16635640-16635756)
chr8 (53-141)||(16643195-16643284)
chr8 (31-115)||(27819632-27819715)
chr8 (36-94)||(14693376-14693434)
chr8 (30-83)||(4038984-4039037)
chr8 (30-83)||(29147340-29147393)
chr8 (31-84)||(36190775-36190828)
chr8 (31-119)||(2628268-2628355)
chr8 (31-83)||(14576249-14576301)
chr8 (23-63)||(40486588-40486628)
[»] chr7 (46 HSPs)
chr7 (13-205)||(45598782-45598975)
chr7 (13-168)||(43107948-43108105)
chr7 (13-205)||(41889049-41889242)
chr7 (13-205)||(35181070-35181263)
chr7 (13-168)||(23106367-23106524)
chr7 (13-165)||(47383324-47383477)
chr7 (13-168)||(34808134-34808290)
chr7 (13-205)||(40560260-40560453)
chr7 (13-168)||(48879303-48879459)
chr7 (17-206)||(44600323-44600513)
chr7 (13-205)||(21654164-21654357)
chr7 (13-160)||(40583068-40583216)
chr7 (13-205)||(41815736-41815929)
chr7 (13-161)||(3157358-3157507)
chr7 (17-165)||(36576336-36576485)
chr7 (13-168)||(42617586-42617742)
chr7 (13-153)||(22111373-22111514)
chr7 (17-165)||(19933102-19933251)
chr7 (17-165)||(19964241-19964390)
chr7 (13-160)||(23731483-23731631)
chr7 (17-203)||(32491154-32491340)
chr7 (13-168)||(48937932-48938086)
chr7 (13-168)||(48942958-48943112)
chr7 (13-118)||(18206362-18206467)
chr7 (13-205)||(41890285-41890496)
chr7 (13-165)||(9818399-9818539)
chr7 (13-165)||(10720324-10720464)
chr7 (30-164)||(39348708-39348843)
chr7 (13-110)||(33153013-33153110)
chr7 (13-94)||(7989351-7989432)
chr7 (13-118)||(30082319-30082424)
chr7 (13-122)||(35084144-35084253)
chr7 (30-165)||(39337445-39337584)
chr7 (30-162)||(35888070-35888203)
chr7 (30-155)||(31769063-31769189)
chr7 (13-94)||(28608363-28608444)
chr7 (19-118)||(29236117-29236215)
chr7 (30-98)||(48339322-48339390)
chr7 (105-162)||(7989425-7989483)
chr7 (30-118)||(18800834-18800922)
chr7 (17-119)||(38260287-38260388)
chr7 (55-97)||(28941277-28941319)
chr7 (31-84)||(25944581-25944634)
chr7 (30-119)||(39170506-39170593)
chr7 (55-99)||(3777968-3778012)
chr7 (49-97)||(37767139-37767187)
[»] chr5 (34 HSPs)
chr5 (13-205)||(30086633-30086826)
chr5 (13-168)||(8146098-8146254)
chr5 (13-205)||(12638771-12638963)
chr5 (17-168)||(31690709-31690861)
chr5 (13-206)||(42364919-42365109)
chr5 (13-205)||(13146610-13146803)
chr5 (13-168)||(37066308-37066464)
chr5 (13-162)||(8541649-8541799)
chr5 (13-165)||(16286168-16286321)
chr5 (13-165)||(20914780-20914933)
chr5 (13-165)||(35462803-35462956)
chr5 (13-164)||(24432485-24432637)
chr5 (13-154)||(31316886-31317028)
chr5 (13-205)||(25962533-25962730)
chr5 (13-155)||(17825283-17825425)
chr5 (17-165)||(24439493-24439642)
chr5 (13-162)||(8143858-8144008)
chr5 (13-118)||(2002218-2002323)
chr5 (49-168)||(20452543-20452664)
chr5 (30-119)||(3463917-3464006)
chr5 (36-119)||(28907039-28907122)
chr5 (36-119)||(28943434-28943517)
chr5 (30-119)||(8959611-8959699)
chr5 (30-119)||(16153447-16153535)
chr5 (55-119)||(8506408-8506471)
chr5 (55-112)||(1144624-1144680)
chr5 (55-119)||(10154055-10154118)
chr5 (55-170)||(29307317-29307433)
chr5 (126-168)||(32433573-32433616)
chr5 (49-165)||(35275346-35275463)
chr5 (31-84)||(42273654-42273705)
chr5 (29-82)||(445990-446043)
chr5 (62-119)||(6391840-6391896)
chr5 (47-84)||(15006413-15006450)
[»] chr3 (55 HSPs)
chr3 (17-198)||(31126099-31126281)
chr3 (19-168)||(1335027-1335177)
chr3 (13-168)||(46580453-46580609)
chr3 (13-205)||(37324131-37324328)
chr3 (17-206)||(21654123-21654314)
chr3 (13-198)||(26641159-26641345)
chr3 (13-205)||(23513447-23513640)
chr3 (13-168)||(55400655-55400811)
chr3 (20-172)||(13541190-13541343)
chr3 (13-168)||(53020099-53020256)
chr3 (13-172)||(51255101-51255259)
chr3 (13-162)||(28793084-28793235)
chr3 (17-168)||(51426534-51426688)
chr3 (13-165)||(32322286-32322439)
chr3 (13-165)||(45781317-45781470)
chr3 (13-154)||(46296124-46296266)
chr3 (13-165)||(16739207-16739355)
chr3 (13-158)||(52172057-52172204)
chr3 (13-119)||(49068018-49068124)
chr3 (17-206)||(43575837-43576026)
chr3 (32-204)||(46819930-46820103)
chr3 (13-118)||(52252004-52252109)
chr3 (13-165)||(36189053-36189206)
chr3 (85-205)||(34022501-34022622)
chr3 (30-165)||(2994479-2994616)
chr3 (30-165)||(21214161-21214298)
chr3 (30-165)||(22456069-22456206)
chr3 (30-165)||(22479115-22479252)
chr3 (13-68)||(45347760-45347815)
chr3 (13-102)||(51309397-51309486)
chr3 (30-122)||(47444034-47444125)
chr3 (30-165)||(10251931-10252068)
chr3 (31-119)||(30454786-30454873)
chr3 (39-119)||(48291791-48291870)
chr3 (36-160)||(49583890-49584016)
chr3 (13-60)||(34022625-34022672)
chr3 (30-165)||(10114832-10114968)
chr3 (30-119)||(10014238-10014326)
chr3 (36-165)||(23209347-23209478)
chr3 (31-119)||(34194857-34194944)
chr3 (31-119)||(54725665-54725752)
chr3 (36-119)||(29676514-29676596)
chr3 (13-96)||(46303534-46303617)
chr3 (31-116)||(8097080-8097164)
chr3 (30-83)||(25242239-25242292)
chr3 (29-165)||(38401300-38401438)
chr3 (17-119)||(7886665-7886766)
chr3 (31-84)||(50651099-50651152)
chr3 (125-205)||(49066993-49067074)
chr3 (30-84)||(20847329-20847383)
chr3 (31-84)||(35963161-35963214)
chr3 (31-84)||(50730118-50730171)
chr3 (31-84)||(50782683-50782736)
chr3 (50-82)||(3972286-3972318)
chr3 (50-82)||(3997560-3997592)
[»] chr6 (19 HSPs)
chr6 (13-205)||(10227791-10227984)
chr6 (13-168)||(12278622-12278778)
chr6 (13-168)||(17721894-17722050)
chr6 (13-205)||(30766325-30766518)
chr6 (13-205)||(30949014-30949207)
chr6 (13-205)||(33756135-33756328)
chr6 (17-166)||(374017-374167)
chr6 (13-162)||(17598215-17598365)
chr6 (19-165)||(31887212-31887360)
chr6 (30-119)||(3888396-3888484)
chr6 (31-165)||(5300696-5300831)
chr6 (41-115)||(32882806-32882880)
chr6 (30-119)||(4031956-4032044)
chr6 (30-119)||(16524349-16524436)
chr6 (208-260)||(13208473-13208525)
chr6 (30-117)||(4987914-4988000)
chr6 (33-85)||(21963957-21964009)
chr6 (37-111)||(16655172-16655245)
chr6 (55-119)||(15830664-15830727)
[»] scaffold0495 (1 HSPs)
scaffold0495 (13-205)||(4510-4702)
[»] scaffold0330 (1 HSPs)
scaffold0330 (30-119)||(3139-3227)


Alignment Details
Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 29180463 - 29180656
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29180463 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaa 29180562  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||||||| || ||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  29180563 acataataataacataaaagtttgtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 29180656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 30776535 - 30776728
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30776535 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaa 30776634  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| |||       |||||||||||| |||||| ||||||    
T  30776635 acataataataacataaaagttggtcttttttgcttatattttgagacaaataatatgagatttttttgcttatattttaggacggagggagta 30776728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 30777556 - 30777363
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30777556 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaa 30777457  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| |||       |||||||||||| |||||| ||||||    
T  30777456 acataataataacataaaagttggtcttttttgcttatattttgagacaaataatatgagatttttttgcttatattttaggacggagggagta 30777363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 39970040 - 39970233
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  39970040 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttggttgaaaaa 39970139  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  39970140 acataataatagcataaaaattagtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 39970233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 10591554 - 10591746
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10591554 attctcattggttaaaaattatggaaaaaataaaaaggagaaccaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 10591653  T
Q  113 acataataatgacataaaaattggtcttttttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||| |||       |||||||||||| |||||| ||||||    
T  10591654 acataataatagcataaaaattagtcttttttcttatattttgagacaaaaaatatgagatttttttgcttatattttaggacggagggagta 10591746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 52713132 - 52712939
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52713132 attcttattggttgaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 52713033  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  52713032 acataataatagcataaaaattggtcttttttacttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 52712939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 53677530 - 53677686
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53677530 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 53677629  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  53677630 acataataatagcataaaagttggttttttttgcttatattttgagacaaagaatat 53677686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 49902096 - 49901939
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  49902096 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaa 49901997  T
Q  113 acataataatgacataaaaattggtctttttt--cttatattttgagacaaagaatat 168  Q
    |||||||||| |||||||| || || ||||||  ||||||||||||||||||||||||    
T  49901996 acataataataacataaaagtttgtttttttttgcttatattttgagacaaagaatat 49901939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3043218 - 3043374
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3043218 attctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 3043317  T
Q  113 acataataatgacataaaaattggtcttttt-tcttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| ||| |||||||  ||||||||||||||||||||||||    
T  3043318 acataataatagcataaaagttgatctttttcgcttatattttgagacaaagaatat 3043374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 43980567 - 43980374
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43980567 attctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 43980468  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    | ||||||||  ||||||| ||||| |||||| |||||||||| ||||||||||||| |||        ||||||||||| ||||||||||||||    
T  43980467 atataataatagcataaaagttggtattttttacttatattttaagacaaagaatatgagaatttttt-cttatattttaggacggatggagtac 43980374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 32012378 - 32012531
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  32012378 attctcattggttaaaaattatagagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 32012477  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||  ||||||| || ||||||||| |||||||||||||||||||||    
T  32012478 acataataatagcataaaagtttgtcttttttgcttatattttgagacaaagaa 32012531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 50768510 - 50768361
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  50768510 tcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 50768411  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    || |||  ||||||| |||||||||||| |||||||||||||||||||||    
T  50768410 aaaaatagcataaaagttggtcttttttgcttatattttgagacaaagaa 50768361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 37788520 - 37788327
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  37788520 attctcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaagttgcatttaattttacattggaaaagatgatttgtttgaaaaa 37788421  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||  ||||||| |||||||||||| |||||||||||||| |||||| || | |       ||||||||||||||||||| ||||||    
T  37788420 acataaaaatagcataaaagttggtcttttttacttatattttgagataaagaaaatgatatttttttgcttatattttaagacggagggagta 37788327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 55937754 - 55937948
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  55937754 attctcattggttaaaaattatggagaagataaaaaggagaacaaattaaatacaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 55937853  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    |||||| |||  ||||||| |||||||||||| |||||||||| |||||||||| || |||       |||||||||||| |||||| |||||||    
T  55937854 acataaaaatatcataaaagttggtcttttttgcttatattttaagacaaagaaaatgagatttttttgcttatattttaggacggagggagtac 55937948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 9798126 - 9798319
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  9798126 attctcattgattacaaattatggagaaaataaaaaggagaacacattgaatccaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 9798225  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| ||| |||||||| |||||||||| ||| ||||||||| |||       |||||||||||| |||||| ||||||    
T  9798226 acataataatagcataaaagttgatcttttttgcttatattttaagataaagaatatgagaattttttgcttatattttaggacggagggagta 9798319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 38940938 - 38940785
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38940938 attctcattgattaaaaattttggaaaaaataaaaagaagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 38940839  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||    
T  38940838 acataataatagcataaaagttggtattttttgcttatattttgagacaaagaa 38940785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 1620098 - 1619942
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  1620098 attctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaaattgcatttaattttacattgaaaaagatgatttgtttgaaaaa 1619999  T
Q  113 acataataatgacataaaaattggtctttt-ttcttatattttgagacaaagaatat 168  Q
    | ||||||||  ||||||| ||||| |||| |  |||||||||||||||||||||||    
T  1619998 atataataatagcataaaagttggtgttttatgattatattttgagacaaagaatat 1619942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 38187777 - 38187930
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||     
T  38187777 attctcatttgttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaat 38187876  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||| ||||  ||||||| ||| |||||||| |||||||||||||| ||||||    
T  38187877 acatactaatagcataaaagttgatcttttttacttatattttgagataaagaa 38187930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 29899784 - 29899591
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  29899784 attctcattggttaaaaatcatgaagaaaataaaaaggtgaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 29899685  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||  ||||||| |||||||||||| ||||||| |||| ||||| || || |||       |||||||||||| |||||| ||||||    
T  29899684 acataaaaatagcataaaagttggtcttttttgcttatatgttgaaacaaacaaaatgagatttttttgcttatattttaggacggagggagta 29899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 51495218 - 51495079
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  51495218 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttaaaaaa 51495119  T
Q  113 acataataatgacataaaaattggtctttttt-cttatatttt 154  Q
    ||||||||    ||||||| ||| |||||||| ||||||||||    
T  51495118 acataata---gcataaaagttgatcttttttgcttatatttt 51495079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 47807264 - 47807157
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  47807264 attctcgttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaa 47807165  T
Q  113 acataata 120  Q
    ||||||||    
T  47807164 acataata 47807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 27750409 - 27750552
Alignment:
Q  23 gttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataat 122  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  27750409 gttaaaaattatggaaaaaataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaataacataaaaat 27750508  T
Q  123 gacataaaaattggtct-tttttcttatattttgagacaaagaa 165  Q
      ||||||| ||||||| || | |||||||||||||| ||||||    
T  27750509 agcataaaagttggtctgttatgcttatattttgagataaagaa 27750552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 30012009 - 30012157
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataa--tttgtttgaaaaaac 114  Q
    |||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| |||||| |  ||| ||| |||||||    
T  30012009 tcattggttaattattatggagaaaataaaaa--agaacaaattgaatgcaatttgcatttaattttactttgg-aaagatgattttttttttaaaaaac 30012105  T
Q  115 ataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||   |||||| ||| |||||||| ||||||||||| |||||||||    
T  30012106 ataataatagaataaaagttgatcttttttgcttatattttgggacaaagaa 30012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 5234059 - 5234171
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataa-tttgtttgaaaaaacata 117  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||  ||||||||| ||| ||||||||||||||    
T  5234059 attggttaattattatggagaaaataaaaaggagaataaattgaatgcaatttacatttaatttta-ttttaaaaagataattttttttgaaaaaacata 5234157  T
Q  118 ataatgacataaaa 131  Q
    |||||  |||||||    
T  5234158 ataatagcataaaa 5234171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 5222370 - 5222502
Alignment:
Q  39 aaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataa-----tttgtttgaaaaaacataataatgacataaaaat 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || |     ||| ||| |||||||||||||||   |||||| |    
T  5222370 aaaataaaaaggagaacaaattcaatgcaatttgcatttaattttactttggaaaaaatgattttttttttttaaaaaaacataataatagtataaaagt 5222469  T
Q  134 tggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||| ||||||||||  |||||||||    
T  5222470 tggtcttttttacttatattttaggacaaagaa 5222502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 23978210 - 23978298
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  23978210 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaaacataat 23978298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 37911941 - 37911804
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| ||||||||||||| |||| |||||| |||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||||  |||   ||    
T  37911941 attatagagaaaataaaaaagagagcaaattcaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaatatgat 37911843  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| || ||||||||| |||||| |||| |||||||||    
T  37911842 aaaatttagtcttttttacttataatttgggacaaagaa 37911804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 8178335 - 8178470
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacata 128  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||   || ||||| ||||||| ||||||| || |||||  |||   |||    
T  8178335 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcttttagaaaatataattt-tttgaaacaatataattaaatatgata 8178433  T
Q  129 aaaattggtcttttttcttatattttgagacaaagaa 165  Q
    ||| |||||||||||||||||| ||||||||||||||    
T  8178434 aaagttggtcttttttcttataatttgagacaaagaa 8178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 46070641 - 46070753
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaattggtctttttt--cttatat 151  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||| ||| ||| ||||||||  |||   |||||||||||||||||||  ||||||     
T  46070641 aaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttcaaacaacataattaaatatgataaaaattggtctttttttgcttataa 46070739  T
Q  152 tttgagacaaagaa 165  Q
    |||| |||||||||    
T  46070740 tttgggacaaagaa 46070753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 47516287 - 47516423
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacata 128  Q
    |||| |||||||| |||  |||| |||||  |||||| |||| |||||||||| | |||||||||||||||| ||||||| ||||||||  ||||  |||    
T  47516287 ttattgagaaaatgaaagagagagcaaatcaaatgcactttgtatttaattttcctttggaaaagataattt-tttgaaacaacataattaaatgtaata 47516385  T
Q  129 aaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||| |||||||||||| |||||| |||| |||||||||    
T  47516386 aaagttggtcttttttgcttataatttgggacaaagaa 47516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 8013190 - 8013321
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaat 133  Q
    |||||||| |||  ||||||| | ||||||||| ||||||||||||||   |||||||||||||||| |||||||||| |||||  |||   |||||| |    
T  8013190 gagaaaatgaaagagagaacataatgaatgcaaattgcatttaatttttacttggaaaagataattt-tttgaaaaaatataattaaatatgataaaagt 8013288  T
Q  134 tggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||| |||||| |||| |||||||||    
T  8013289 tggtcttttttacttataatttgggacaaagaa 8013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 28142717 - 28142804
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||| |||||| |||||  ||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  28142717 attatagagaaaatgaaaaagagagcaaattaaatgct-tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataat 28142804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 32410386 - 32410252
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgaca 126  Q
    |||||| ||||||||||||| |||| |||||||||| || ||||||||||||||| | ||||||||  |||| | |||||||||| |||||  |||   |    
T  32410386 aattatagagaaaataaaaaagagagcaaattgaatacactttgcatttaattttcctttggaaaaagtaatat-tttgaaaaaatataattaaatacga 32410288  T
Q  127 taaaaattggtcttttttcttatattttgagacaaa 162  Q
    ||||| ||| ||||||| | |||| |||||||||||    
T  32410287 taaaagttgatctttttgcatataatttgagacaaa 32410252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 28318538 - 28318600
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||||||| ||| ||||||||||| | |||||||||||||||| ||||||||||||||||    
T  28318538 aaattgaatgcattttacatttaattttcctttggaaaagataattt-tttgaaaaaacataat 28318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 40553839 - 40553690
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||  | ||||||||||| | |||||||||  ||| |||||||||||||||||||||||  | ||||||||||| |||| ||| ||| |||||    
T  40553839 tcattggttattagttatggagaaagtgaaaaggagagtaaaatgaatgcaatttgcatttaatttctctttggaaaagatgattt-ttttaaataacat 40553741  T
Q  117 aat--aatgacataaaaattggtcttttttcttatattttgagacaaagaa 165  Q
    |||  |||   |||||  ||||||||||| | |||| |||| |||||||||    
T  40553740 aattaaatatgataaatgttggtctttttgcatataatttgggacaaagaa 40553690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17799230 - 17799296
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat 97  Q
    ||||||||||||| | | |||||||||||| ||||||||||||||||| ||| || |||||||||||    
T  17799230 ttatggagaaaatgagagggagaacaaattaaatgcaatttgcatttagtttcactttggaaaagat 17799296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 5064750 - 5064821
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatt 101  Q
    ||||| |||||||| |||| ||||  |||||||||||| ||||||||||||||| | ||| |||||||||||    
T  5064750 attatagagaaaatgaaaaagagagtaaattgaatgcactttgcatttaattttcctttgaaaaagataatt 5064821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 38140826 - 38140896
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||||| | |||||||||| |||||||||| |  ||||||||||| |||| ||||||| ||||||||    
T  38140826 ggagaacaaactaaatgcaattttcatttaatttcattttggaaaagatgatttttttgaaataacataat 38140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 7652121 - 7652182
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaa 94  Q
    |||||||||||| || |||||||||||||| || ||||| ||||||||||||| ||| ||||    
T  7652121 atggagaaaatagaatggagaacaaattgagtgaaattttcatttaattttactttgaaaaa 7652182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 17236342 - 17236446
Alignment:
Q  53 aacaaattgaatgcaatttgcatttaattttacattggaaaagataa--tttgtttgaaaaaacataataatgacataaaaattggtct-tttttcttat 149  Q
    ||||||||||||||||||||||||||||||||  || ||||| || |  ||| ||| || ||  |||||||| ||||||||||| |||| |||| |||||    
T  17236342 aacaaattgaatgcaatttgcatttaattttattttagaaaaaatgatttttttttaaataagaataataataacataaaaatttgtctattttacttat 17236441  T
Q  150 atttt 154  Q
    |||||    
T  17236442 atttt 17236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 47806855 - 47806811
Alignment:
Q  125 cataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||    
T  47806855 cataaaaattgatcttttttgcttatattttgagacaaagaatat 47806811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 40411152 - 40411070
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||| |||| |||| ||||||||||||| ||| ||||||||||||| ||  ||||||| |||| ||| ||||||| ||||    
T  40411152 gagaaaatgaaaaagagatcaaattgaatgcagtttacatttaattttactttaaaaaagat-atttttttaaaaaaacttaat 40411070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 49080306 - 49080224
Alignment:
Q  38 gaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaa-gataatttgtttgaaaaaacataat 119  Q
    |||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| ||||  | ||||| ||| ||||||||||||    
T  49080306 gaaaatgaaaaagagatcaaattgaatgcactttgcatttaattttcctttgaaaaataacaatttttttaaaaaaacataat 49080224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 53848499 - 53848387
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaattggtctttttt-cttatat 151  Q
    ||||||||||||| |||||||||| |||| | ||| ||||||| |||| ||||||| || |||||  |||   |||||| |||||||||||| ||||||     
T  53848499 caaattgaatgcactttgcatttattttttctttgaaaaagatgattt-tttgaaacaatataattaaatttgataaaagttggtcttttttacttataa 53848401  T
Q  152 tttgagacaaagaa 165  Q
    |||| |||||||||    
T  53848400 tttgggacaaagaa 53848387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 792440 - 792633
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  792440 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaa 792539  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  792540 acataataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 792633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 21539829 - 21539636
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  21539829 attctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 21539730  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| ||||||    
T  21539729 acataataataacataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagta 21539636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 29514107 - 29514296
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  29514107 tcattggttaaaaattatagagaaaataaaaatgagaacaaattgaatgcaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaacat 29514206  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  29514207 aataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaagacggatggagta 29514296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 29514563 - 29514744
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  29514563 tcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttacatttaattttacattgggaaagatgatttgtttgaaaaaacat 29514662  T
Q  117 aataatgacataaaaattggtcttttttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacgga 198  Q
    ||||||  ||||||| |||||||||||||||||||||||||||||||||||| |||       |||||||||||| ||||||    
T  29514663 aataatagcataaaagttggtcttttttcttatattttgagacaaagaatatgagatttttttgcttatattttaggacgga 29514744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 4033759 - 4033952
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  4033759 attctcgttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaa 4033858  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||||||| |||||||| ||||||||||||||||||||| ||||||       ||||||||||||  ||||||||||||    
T  4033859 acataataatagcataaaaattgatcttttttgcttatattttgagacaaagaaaataagatttttttgcttatattttagaacggatggagta 4033952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 5091624 - 5091782
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg--aaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||  |||    
T  5091624 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 5091723  T
Q  111 aaacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||| |||||||||    
T  5091724 aaacataataatggcataaaagttggtcttttttacttatattttgagataaagaatat 5091782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 28424337 - 28424188
Alignment:
Q  22 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28424337 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataa 28424238  T
Q  122 tgacataaaaattggtctttttt-cttatattttgagacaaagaatataa 170  Q
    |  ||||||| |||||||||||| |||| |||||||||||||||||||||    
T  28424237 tagcataaaagttggtcttttttgcttaaattttgagacaaagaatataa 28424188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 43075818 - 43075629
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43075818 tcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttacattggaatagatgatttgtttgaaaaaacat 43075719  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||  ||||||| ||||| |||||| |||||||||||| ||||| ||||| |||       ||||||||||||||||||| ||||||    
T  43075718 aataatagcataaaagttggtattttttgcttatattttgacacaaaaaatatgagatttttttgcttatattttaagacggagggagta 43075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 14565457 - 14565616
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  14565457 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaa 14565556  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataa 170  Q
    |||||||||||  ||||||| || ||||||||| ||||||||||||||||||||||||||    
T  14565557 aacataataatagcataaaagttagtcttttttgcttatattttgagacaaagaatataa 14565616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 35832484 - 35832326
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  35832484 attctcattagttaaaaattatggagaaaataaaaaggtgaacagattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaa 35832385  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataa 170  Q
    ||||||||||  |||||||||  ||||||||| ||||||||||||||||||||||||||    
T  35832384 acataataatagcataaaaatatgtcttttttgcttatattttgagacaaagaatataa 35832326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 28492592 - 28492398
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  28492592 attctcattggttaaaaattatagagaaaataaaaaggagaataagttgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaa 28492493  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    | ||||||||  ||||||| |||||||||||| |||||||||| |||||||||| ||||||       |||||||||||| |||||| |||||||    
T  28492492 atataataatagcataaaagttggtcttttttgcttatattttaagacaaagaaaataagatttttttgcttatattttaggacggagggagtac 28492398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 33635408 - 33635255
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  33635408 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttgaaaaa 33635309  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| |||||||||||| |||||||||||||||||||||    
T  33635308 acataaaaatagcataaaagttggtcttttttgcttatattttgagacaaagaa 33635255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 8784467 - 8784311
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  8784467 attcttattgattaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaata 8784368  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  8784367 acataataatagcataaaagttggtcttttttacttatattttgagacaaagaatat 8784311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 38549727 - 38549880
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||    
T  38549727 attctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaa 38549826  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||  ||||||| ||| |||||||| |||||||||||||||||||||    
T  38549827 acataataatagcataaaagttgatcttttttgcttatattttgagacaaagaa 38549880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 10478250 - 10478097
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| ||    
T  10478250 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatcatttgtttgaaaaa 10478151  T
Q  112 aacataataatgacataaaaattggtctttttt---cttatattttgagacaaa 162  Q
    ||||||| |||  ||||||||||||| ||||||   ||||||||||||||||||    
T  10478150 aacataaaaatagcataaaaattggttttttttttgcttatattttgagacaaa 10478097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 44803970 - 44803823
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||    
T  44803970 attctcattggttaaaaattatggagaaaataaataggagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttattt-aaaaa 44803872  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagaca 160  Q
    | |||||||| |||||||| ||  |||||||| ||||||||||||||||    
T  44803871 atataataataacataaaagtttatcttttttacttatattttgagaca 44803823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 4092083 - 4091929
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| |||| ||||    
T  4092083 attctcaatggttaaaaattatggaaaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttatttgaaaaa 4091984  T
Q  112 aacataataatgacataaaaattggtcttt-tttcttatattttgagacaaagaa 165  Q
    || ||||||||  ||||||| ||||| ||| || |||||||||||||||||||||    
T  4091983 aatataataatagcataaaagttggtttttcttgcttatattttgagacaaagaa 4091929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 15858740 - 15858850
Alignment:
Q  59 ttgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataaaaattggtctttttt-cttatattttgag 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||||| |||||||||||| |||||||||||||    
T  15858740 ttgaatgcaatttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaatttggtcttttttacttatattttgag 15858839  T
Q  158 acaaagaatat 168  Q
    |||||||||||    
T  15858840 acaaagaatat 15858850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 22162368 - 22162249
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataaaaatt-g 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||      
T  22162368 agaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaacataataatagcataaaagttaa 22162269  T
Q  136 gtctttttt-cttatatttt 154  Q
    ||||||||| ||||||||||    
T  22162268 gtcttttttgcttatatttt 22162249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 43451573 - 43451472
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  43451573 tcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaataacat 43451474  T
Q  117 aa 118  Q
    ||    
T  43451473 aa 43451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 18833998 - 18834149
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgttt---gaaaaaa 113  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| |||| |||    ||||||    
T  18833998 tcattggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttactttag-aaagatgatttttttttaaaaaaaa 18834096  T
Q  114 cataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||||||   |||||| ||| |||||||| ||||||||||| |||||||||    
T  18834097 cataataatagaataaaagttgatcttttttgcttatattttgggacaaagaa 18834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 9294727 - 9294603
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||  |||||||||| |||| | || ||||||||||||||||||||||||||||||||||| ||| ||||||| |||| | ||||| |    
T  9294727 attcttattggttaatgattatggagagaatagagagaagaacaaattgaatgcaatttgcatttaattttactttgaaaaagatgatttttatgaaata 9294628  T
Q  113 acataataatgacataaaaattggt 137  Q
    |||||||||  ||||||||||||||    
T  9294627 acataataagaacataaaaattggt 9294603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 15068807 - 15068665
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||||       
T  15068807 attcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgcatttaattttactttggaaaagatgattttcttgaa--- 15068711  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
      |||||      |||||||||| |||||||| |||||||||||||||||||||    
T  15068710 --ataat------ataaaaattgatcttttttgcttatattttgagacaaagaa 15068665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 13822854 - 13822959
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||  |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||| ||| |    
T  13822854 attcttattggttaatgattatggagagaatagaaatgagaacaaattgaatgcaatttgcatttaattttactttgaaaaagattatttttttaaaata 13822953  T
Q  113 acataa 118  Q
    ||||||    
T  13822954 acataa 13822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 20380182 - 20380067
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||||  ||| | ||    
T  20380182 attatagagaaaatgaaaacgagagcaaattgaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaataagat 20380084  T
Q  128 aaaaattggtctttttt 144  Q
    |||| ||||||||||||    
T  20380083 aaaagttggtctttttt 20380067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 26998376 - 26998239
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||| |||||  |||   ||    
T  26998376 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaatataattaaatatgat 26998278  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| |||||||||||| |||||| |||  |||||||||    
T  26998277 aaaagttggtcttttttgcttataatttaggacaaagaa 26998239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 44442190 - 44442055
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataa 129  Q
    ||||| |||||||| |||| || | ||||||||||||| ||||||||||||||| | || ||||||||||||| ||| |||||||||||| |    ||||    
T  44442190 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaattttcctttagaaaagataatttttttcaaaaaacataattaaataataa 44442091  T
Q  130 aaattggtcttttttcttatattttgagacaaagaa 165  Q
    || ||| ||||||| |||||| |||| |||||||||    
T  44442090 aagttgctctttttccttataatttgggacaaagaa 44442055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 10979198 - 10979114
Alignment:
Q  78 aattttacattggaaaagataatttgtttgaaaaaacataataatgacataaaaattggtcttttttcttatattttgagacaaa 162  Q
    |||| ||| ||||||||||| |||||||||||||||||||| |||  ||||||| ||||||||||||  ||||||||||||||||    
T  10979198 aattctactttggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgctatattttgagacaaa 10979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 32273730 - 32273593
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||| ||||||||||| | |||||||| ||||||| ||||||||||||||||  |||   ||    
T  32273730 attatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaattttcctttggaaaatataattt-tttgaaaaaacataattaaatatgat 32273632  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| |||||||||||| |||||| |||  |||||||||    
T  32273631 aaaagttggtcttttttgcttataatttaggacaaagaa 32273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 38071054 - 38070918
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||| ||||||||||| | |||||||||||||||| ||||||||||||||||  |||   ||    
T  38071054 attatagagaaaatgaaaat-agagcaaattgaatgcactttacatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 38070957  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| || ||||||||| |||||| |||| |||||||||    
T  38070956 aaaagtttgtcttttttgcttataatttgggacaaagaa 38070918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 9709572 - 9709485
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||  ||||||||||||||||||||||||| |||||||| | |||| ||||||||||| ||||||| ||||||||    
T  9709572 attattgagaaaatgaaagagagaacaaattgaatgcaatttgca-ttaatttttctttggtaaagataattt-tttgaaacaacataat 9709485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 32010161 - 32010073
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||| |||||| |||||| ||||||||||||||| | ||| |||||||||||| |||||||||| |||||    
T  32010161 attatagagaaaatgaaaaagagagcaaattaaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaaaaatataat 32010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 10979241 - 10979197
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaa 57  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  10979241 attctcattagttaaaaattatggagaaaataaaaaggagaacaa 10979197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 38071571 - 38071658
Alignment:
Q  62 aatgcaatttgcatttaattttacattggaaaagataatttgtttgaaa-----aaacataataatgacataaaaattggtctttttt 144  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||     || ||||||||| |||||||| ||| ||||||||    
T  38071571 aatgcaatttgtatataattttacattggaaaagatgatttgtttgaaaaacataatcataataataacataaaagttgctctttttt 38071658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 4891747 - 4891828
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||| |||| |||| || |||||||||| ||| ||||||||||| | ||| |||| ||||||| ||||||||||||||||    
T  4891747 agaaaatgaaaaagagagcagattgaatgcactttacatttaattttcctttgaaaaatataattt-tttgaaaaaacataat 4891828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 8032790 - 8032858
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| ||||||||||||| ||||||||||||||| | ||| |||||||||||| ||| ||| ||||||||    
T  8032790 gagagcaaattgaatgcattttgcatttaatttttctttgaaaaagataattt-tttaaaacaacataat 8032858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 11031025 - 11031161
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacata 128  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||   ||||||| || ||||| ||| ||| ||||||||  |||   |||    
T  11031025 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcttttggaaatgacaattt-tttaaaacaacataattaaatatgata 11031123  T
Q  129 aaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||| ||| |||||||| |||||| |||||| |||||||    
T  11031124 aaagttgatcttttttacttataatttgagtcaaagaa 11031161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 12872168 - 12872107
Alignment:
Q  41 aataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataattt 102  Q
    |||| ||||||||| ||||| |||| |||||| |||||||||||| ||| ||||||| ||||    
T  12872168 aatagaaaggagaataaattaaatgaaatttgtatttaattttactttgaaaaagatgattt 12872107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 33933045 - 33933109
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| ||||||||| || ||||||||||| | ||||||||||| |||| ||||||| ||| ||||    
T  33933045 caaaatgaatgcaacttacatttaatttttctttggaaaagatgatttttttgaaataacgtaat 33933109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 18852295 - 18852102
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18852295 attctcattggttaaaaattatggagaaaataaaaaggggaacaaattgaatgcaatttgcatttaattttacattggaaaaaataatttgtttgaaaaa 18852196  T
Q  113 acataataatgacataaaaattggtctttt-ttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||| |||       ||||||||||||||||||| ||||||    
T  18852195 acataataatgacataaaagtaggtcttttatgcttatattttgagacaaagaatatgagatttttttgcttatattttaagacggagggagta 18852102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 44875251 - 44875058
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44875251 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 44875152  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  44875151 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 44875058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 43656129 - 43656317
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43656129 tcattggttaaaaattatgaagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 43656228  T
Q  117 aataatgacataaaaattggtcttttttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||||||| ||| | ||||| |||||||||||||||||||||||| |||       ||||||||||||||||||| ||||||    
T  43656229 aataatgacataaaagttgatttttttccttatattttgagacaaagaatatgagatttttttgcttatattttaagacggagggagta 43656317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 15285875 - 15285683
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15285875 attctcattggttaaaaattatggagaaaaaaaaaag-agaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 15285777  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||       ||||||||||||||||||| ||||||    
T  15285776 acataataatggcataaaaattggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaagacggagggagta 15285683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 25990816 - 25990664
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25990816 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 25990717  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  25990716 aataatagcataaaaattggtcttttttgcttatattttgagacaaagaatat 25990664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 40220128 - 40219936
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40220128 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat-atttgtttgaaaaa 40220030  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  40220029 acataataatagcataaaaattagtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 40219936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 46949389 - 46949200
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  46949389 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacat 46949290  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  46949289 aataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 46949200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 26907184 - 26907370
Alignment:
Q  20 ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26907184 ttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataat 26907283  T
Q  120 aatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||  ||||||| |||||||||||| ||||||||||||||||||||| || |||       ||||||||||||||||||| ||||||    
T  26907284 aatagcataaaagttggtcttttttacttatattttgagacaaagaaaatgagatttttttgcttatattttaagacggagggagta 26907370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 29488820 - 29488626
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  29488820 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaatattatttgtttgaaaaa 29488721  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| |||||||    
T  29488720 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagtac 29488626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 18036616 - 18036464
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  18036616 attctcattggttaaaaattatgaagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttgtttgaaaaa 18036517  T
Q  113 acataataatgacataaaaattggtcttttttcttatattttgagacaaagaa 165  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  18036516 acataataatagcataaaagttggtcttttttcttatattttgagacaaagaa 18036464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 9128115 - 9127921
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  9128115 attctcattggttaaaaattatggagaaaataaaaaggtaaataaattgaatgcaatttacatttaattttacattgaaaaagatgatttgtttgaaaaa 9128016  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    | ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||       ||||||||||||||||||| |||||||    
T  9128015 atataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaagacggagggagtac 9127921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 23873919 - 23874071
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23873919 tcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 23874018  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  ||||||| |||||||||||| | ||||||||||||||||||||||    
T  23874019 aataatagcataaaagttggtcttttttgcgtatattttgagacaaagaatat 23874071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 28017726 - 28017574
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28017726 tcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 28017627  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  ||||||| ||| |||||||| |||||||||||||| |||||||||    
T  28017626 aataatagcataaaagttgatcttttttgcttatattttgagataaagaatat 28017574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 31970397 - 31970549
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||     
T  31970397 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaag 31970496  T
Q  113 acataataatgacataaaaattggtcttttttcttatattttgagacaaagaa 165  Q
    |||||| ||| |||||||| ||| |||||||||||||||||||| ||||||||    
T  31970497 acataaaaataacataaaagttgatcttttttcttatattttgatacaaagaa 31970549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 38942533 - 38942722
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  38942533 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacat 38942632  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||  ||||||| ||| |||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| ||||||    
T  38942633 aataatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagta 38942722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 28916607 - 28916759
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28916607 tcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacat 28916706  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  ||||||| || ||||||||| |||||||||||||||||| |||||    
T  28916707 aataatagcataaaagtttgtcttttttacttatattttgagacaaaaaatat 28916759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 40935701 - 40935894
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| ||    
T  40935701 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaagaa 40935800  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||  ||||||| ||| |||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| ||||||    
T  40935801 acataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagta 40935894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 26479811 - 26479625
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  26479811 attctcattggttaaaaactatagagaaaataaaaaggagaacatattgaatgcaattttcattgaattttacattggaaaagatgatttgtttgaaaaa 26479712  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacgga 198  Q
    | ||||||||| ||||||| ||||| ||||||  ||||||||||||||||||||||| |||       |||||||||||||||||||    
T  26479711 atataataatggcataaaagttggttttttttgtttatattttgagacaaagaatatgagatttttttgcttatattttaagacgga 26479625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 40960562 - 40960715
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  40960562 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 40960661  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| ||| |||||||| |||||||||||||||||||||    
T  40960662 acataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaa 40960715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 47997026 - 47996884
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  47997026 attctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgtatttaattttacattggaaaagatgatttgtttgaaaaa 47996927  T
Q  113 acataataatgacataaaaattggtctttttt-cttatatttt 154  Q
    ||||||||||  ||||||||||| |||||||| ||||||||||    
T  47996926 acataataatagcataaaaattgatcttttttgcttatatttt 47996884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 35941909 - 35941757
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  35941909 tcattgattaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgtatttaattttacattgaaaaagatgatttgtttgaaaaaacat 35941810  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  ||||||| ||| | |||||| ||||||||||||||||||||||||    
T  35941809 aataatagcataaaagttgattttttttgcttatattttgagacaaagaatat 35941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 35189269 - 35189114
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aaaaca 115  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||| ||||||| ||||||||||| ||||||    
T  35189269 tcattggttaaaaattatggagaaaataaagaggagaacacattgaatgcaatttgtagttaattttacattgaaaaagattatttgtttgaaaaaaaca 35189170  T
Q  116 taataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataa 170  Q
    |||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  35189169 taataataccataaaagttggtcttttttgcttatattttgagacaaagaatataa 35189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 45357964 - 45358150
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  || |||||||||||||||||||||||| |||||||||||| |    
T  45357964 attctcattggttaaaaattatggagaaaataaaaaggtgaacaaattaaatgcaacatgtatttaattttacattggaaaagatgatttgtttgaaata 45358063  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacgga 198  Q
    |||||| |||  ||||||| ||||| |||||| ||||||||||||||||||||| || |||       |||||||||||||||||||    
T  45358064 acataaaaatagcataaaagttggttttttttgcttatattttgagacaaagaaaattagatttttttgcttatattttaagacgga 45358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 49924491 - 49924338
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  49924491 attctcattggttaaaaatcatgaagaaaataaaaaggagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 49924392  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| ||| |||||||| |||||||||||||||||||||    
T  49924391 acataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaa 49924338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 4529259 - 4529109
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  4529259 attctcatctgttaaaaattatggagaaaacaaaaagaagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttatttgaaaaa 4529160  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    ||||||||||  ||||||| ||| |||||||| ||||||||||||||||||    
T  4529159 acataataatagcataaaagttgatcttttttgcttatattttgagacaaa 4529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 39026334 - 39026484
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| || |||| |||||||||    
T  39026334 attcttattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattggaaaatatgatttatttgaaaaa 39026433  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    |||||| |||  ||||||| |||||||||||| ||||||||||||||||||    
T  39026434 acataaaaatagcataaaagttggtcttttttgcttatattttgagacaaa 39026484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 6848394 - 6848548
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||    
T  6848394 attctcattggttaaaaattatggagaaaataaaaaggataacgcattgaatgcaatttgcatttaattttagattggaaaagatgatttgttagaaaaa 6848493  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||||  ||||||||   ||||||||| ||||||||||||||||||||||||    
T  6848494 aacataataatagcataaaaa---gtcttttttgcttatattttgagacaaagaatat 6848548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 18913444 - 18913582
Alignment:
Q  23 gttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataat 122  Q
    ||||||||| |||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  18913444 gttaaaaatcatggagaacataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaagat 18913543  T
Q  123 gacataaaaattggtctttttt-cttatattttgagaca 160  Q
      ||| ||||||||| |||||| ||||||||||||||||    
T  18913544 agcatcaaaattggtattttttgcttatattttgagaca 18913582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 15311249 - 15311119
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||  |||||||||||||    
T  15311249 attctcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatacaa-ctgcatttaattttacattgaaaaagatgttttgtttgaaaaa 15311151  T
Q  113 acataataatgacataaaaattggtctttttt 144  Q
    |||||||||   ||||||| ||| ||||||||    
T  15311150 acataataacagcataaaagttgatctttttt 15311119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 36383996 - 36383850
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgttt-gaaaaaaca 115  Q
    ||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||| ||| |||||||||    
T  36383996 tcattggctaattattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttactttgg-aaagatgatttttttagaaaaaaca 36383898  T
Q  116 taataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| ||||||    
T  36383897 taataataacataaaagttgatcttttttgcttatattttgtgacaaa 36383850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 35884279 - 35884138
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||           || ||||||||||||||| ||    
T  35884279 tcattggttaaaaattatagagaaaataaaaagaagaacacatttaatgcaatttgcatttaatttta-----------atgatttgtttgaaaaaatat 35884191  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  ||||||| |||||||||||| |||||||||| ||| |||||||||    
T  35884190 aataatagcataaaagttggtcttttttgcttatattttaagataaagaatat 35884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 44056386 - 44056547
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||  |||||||||||||||| |||||||  |||| |||||||| ||||||||||||||||  || |||||||   || |||||||||    
T  44056386 attctcattggttaatgattatggagaaaataagaaggagagaaaatggaatgcaaattgcatttaattttactctgaaaaagatgggttttttgaaaaa 44056485  T
Q  113 acataataatgacataaaaattggtctttttt--cttatattttgagacaaagaatataaga 172  Q
    ||||| ||||  ||  ||||||| | ||||||  ||||||||||| ||||||||| ||||||    
T  44056486 acatattaatagcaggaaaattgatttttttttgcttatattttgggacaaagaaaataaga 44056547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 25185406 - 25185492
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacata 117  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  25185406 attatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaaacata 25185492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 44510321 - 44510411
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataa 121  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||||||||| ||||    
T  44510321 attatagagaaaatgaaaaggagagcaaattgaatgcactttgcatttaattttcctttggaaaaggtaattt-tttgaaaaaacatgataa 44510411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 7397765 - 7397682
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaac 114  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||    
T  7397765 attatagagaaaatgaaaaaaagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaac 7397682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 16661569 - 16661486
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||| |||||||||||| ||||| ||||||||||    
T  16661569 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataat 16661486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 15912251 - 15912169
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||| | |||||||| || |||| ||||||| ||||||||    
T  15912251 gagaaaatgaaaaggagagcaaattgaatgcagtttgcatttaatttttctttggaaaaaatgattt-tttgaaataacataat 15912169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 5858474 - 5858561
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| |||||||| |||  |||| ||||||||||||| ||||||||||||||| | ||| |||||||||||| ||||||| ||||||||    
T  5858474 ttattgagaaaatgaaacagagagcaaattgaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaacaacataat 5858561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 41063799 - 41063712
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| |||||||| |||  |||||||||||||||||| ||||||||||||||| | ||| |||||||||||| ||||||| || |||||    
T  41063799 ttattgagaaaatcaaagagagaacaaattgaatgcactttgcatttaatttttctttgaaaaagataattt-tttgaaacaatataat 41063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 13351739 - 13351686
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  13351739 attatagagaaaatgaaaaggagaacaaattgaatgcactttgcatttagtttt 13351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 35366330 - 35366393
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| |||| |||||||||| | |||||||| ||||||| ||||||| ||||||||    
T  35366330 caaattgaatgcactttgaatttaatttttctttggaaaatataattt-tttgaaacaacataat 35366393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 37192870 - 37192926
Alignment:
Q  46 aaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataattt 102  Q
    |||| ||||||||||||||||  ||||||| |||||| || ||||||||||||||||    
T  37192870 aaagaagaacaaattgaatgccgtttgcatataatttcactttggaaaagataattt 37192926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 45840167 - 45840220
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| || ||||| |||| |||| ||||||||||||| |||||||||||||||    
T  45840167 attatagaaaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 45840220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 5950478 - 5950426
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagataattt 102  Q
    |||| |||||| |||||| ||| ||||||||||| | ||||||||||||||||    
T  5950478 gagagcaaattaaatgcactttacatttaattttcctttggaaaagataattt 5950426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 37538843 - 37538780
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| |||||| |||||||| |  || |||||||||||| ||||||| ||||||||    
T  37538843 caaattgaatgcactttgcagttaattttcctatgtaaaagataattt-tttgaaacaacataat 37538780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 37735485 - 37735537
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||||||||||||  ||| ||||  |||||||||| ||||||||||||||||    
T  37735485 attatggagaaaatggaaaagagagaaaattgaatgtaatttgcatttaattt 37735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 35260132 - 35259939
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  35260132 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatggaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 35260033  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  35260032 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 35259939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 37598145 - 37597952
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  37598145 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaa 37598046  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||  |||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  37598045 acataataacaacataaaagttggtcttttttgcttatattttgagacaaagaatatgagaatgttttgcttatattttaggacggagggagta 37597952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 24612566 - 24612760
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  24612566 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 24612665  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| |||||||    
T  24612666 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagtac 24612760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 27621205 - 27621049
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27621205 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 27621106  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| || ||||||||| ||||||| ||||||||||||||||    
T  27621105 acataataatagcataaaagtttgtcttttttgcttatatattgagacaaagaatat 27621049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 44411295 - 44411490
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  44411295 attctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 44411394  T
Q  113 acataataatgacataaaaattggtctttttt--cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    | ||||||||  ||||||| ||||||||||||  |||||||||||||| ||||||||| |||       |||||||||||| |||||| |||||||    
T  44411395 atataataatagcataaaagttggtctttttttgcttatattttgagaaaaagaatatgagaatttttagcttatattttaggacggagggagtac 44411490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 44052696 - 44052542
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  44052696 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 44052597  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||||| ||||||    
T  44052596 aacataataataacataaaagttggttttttttgcttatattttgagataaagaa 44052542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 3100028 - 3099834
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  3100028 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 3099929  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||||  |||||||  | ||||||||| |||||||||||| |||||||| || |||       ||||||||||||||||||| ||||||    
T  3099928 aacataataatagcataaaagattgtcttttttgcttatattttgaaacaaagaaaatgagatttttttgcttatattttaagacggagggagta 3099834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 11044132 - 11043939
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||||||    
T  11044132 attctcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaatatgatttatttgaaaaa 11044033  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| ||||||    
T  11044032 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagta 11043939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 27752661 - 27752508
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  27752661 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 27752562  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| ||||||||||||  ||||||||||||||||||||    
T  27752561 acataaaaatagcataaaagttggtcttttttgtttatattttgagacaaagaa 27752508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 35344442 - 35344285
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattg-gaaaagataatttgtttgaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  |||| || |||||||||||||    
T  35344442 attctcattggttaaaaattatggagaaaataaaaaggagaatacattgaatgcaatttgcatttaattttacattgaaaaaaaatgatttgtttgaaaa 35344343  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  35344342 aacataataatagcataaaaattggtcttttttgcttatattttgagacaaagaatat 35344285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 36538133 - 36537940
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36538133 attctcattggttaaaaatcatggagaaaataaaaaggagaataaattaaatgcaaattgcatttaattttacattggaaaagatgatttgtttgaaaaa 36538034  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||  ||||||| || ||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||||||||||    
T  36538033 acataaaaatagcataaaagtttgtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggatggagta 36537940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 32678595 - 32678789
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  32678595 attctcattggttaaaaattatggagaaaataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 32678694  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    |||||||||| |||||||| ||  |||||||| |||||||||| | |||||||| || | |       ||||||||||||||||||| |||||||    
T  32678695 acataataataacataaaagtttatcttttttgcttatattttaaaacaaagaaaatgatatttttttgcttatattttaagacggagggagtac 32678789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 25321676 - 25321832
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  25321676 tcataggttaaaaattatggagaaaataaaaaggagagcaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 25321775  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataaga 172  Q
    || |||  ||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  25321776 aaaaatagcataaaagttggtcttttttgcttatattttgagacaaagaaaataaga 25321832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 39187304 - 39187159
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  39187304 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaatgatgatttgtttgaaaaaacat 39187205  T
Q  117 aataatgacataaaaattggtctttttt--cttatattttgagaca 160  Q
    ||||||  ||||||| || || ||||||  ||||||||||||||||    
T  39187204 aataatagcataaaagtttgtttttttttgcttatattttgagaca 39187159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 35346390 - 35346546
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  35346390 attctcattggttaaaaattatggagataataaaaaggagaatacattgaatgcaatttgcattcaattttacattgaaaaagatgatttgtttgaaaaa 35346489  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| ||| ||||||||  |||||||||||||||||||||||    
T  35346490 acataataatagcataaaagttgatcttttttatttatattttgagacaaagaatat 35346546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 44358577 - 44358708
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44358577 attctcattaattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 44358676  T
Q  113 acataataatgacataaaaattggtctttttt 144  Q
    || ||||||| |||||||| ||| ||||||||    
T  44358677 acgtaataataacataaaagttgatctttttt 44358708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 11992803 - 11992646
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aa 111  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  11992803 attctcattggttaaaaattatggagaaaagaaaaaggtgaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 11992704  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||||  ||||||| | ||| |||||| |||||||||| | |||||||||||    
T  11992703 aacataataatagcataaaagtaggttttttttgcttatattttaatacaaagaatat 11992646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 33851109 - 33851303
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  33851109 attctcattagttaaaaatcatggagaaaataaaaaggaaaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 33851208  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    |||||| |||  ||||||| ||| |||||||| ||||||||||||| ||||||| || |||       |||||||||||| |||||| |||||||    
T  33851209 acataaaaatagcataaaagttgatcttttttgcttatattttgaggcaaagaaaatgagatttttttgcttatattttaggacggagggagtac 33851303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 37567517 - 37567648
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  37567517 attctcattgattaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtctgaaaaa 37567616  T
Q  113 acataataatgacataaaaattggtctttttt 144  Q
    ||||||||||  ||||||| ||||| ||||||    
T  37567617 acataataatagcataaaagttggtatttttt 37567648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 12108240 - 12108049
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||| ||    
T  12108240 tcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcattgaattttacatt-gaaaaaatgatttgtttgaaaaaatat 12108142  T
Q  117 aataatgacataaaaattggtctttttt--cttatattttgagacaaagaatataagannnnnnngct--tatattttaagacggatggagta 205  Q
    ||||||| ||||||| ||||| ||||||  |||||||||||||| ||| ||||| |||       |||  |||||||||||||||||||||||    
T  12108141 aataatggcataaaagttggtttttttttgcttatattttgagataaaaaatatgagatttttttgcttatatattttaagacggatggagta 12108049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 31133115 - 31133219
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31133115 attctcattggttaaaaattatggagaaaataaaaaggagaaaaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 31133214  T
Q  113 acata 117  Q
    |||||    
T  31133215 acata 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 34713603 - 34713511
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34713603 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 2238685 - 2238781
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaaca 115  Q
    ||||||||| ||| ||||||  |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||| ||||    
T  2238685 attggttaataatcatggagtgaatagaaaggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgatttttttgaaataaca 2238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 24510787 - 24510886
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataa 118  Q
    |||||||||  |||||||| | ||||||||| ||||||||||||||||||||||||||||||  ||| |||||||| || |||| ||||||| |||||||    
T  24510787 attggttaatgattatggatagaataaaaagtagaacaaattgaatgcaatttgcatttaatactactttggaaaaaatgatttttttgaaataacataa 24510886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41426408 - 41426325
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataattt 102  Q
    |||||||||  |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  41426408 attggttaatgattatggagataatagaaaggataacaaattgaatgcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 25195149 - 25195237
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||||||||||||| || ||||||||||||||||    
T  25195149 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttggaaaagataagtt-tttgaaaaaacataat 25195237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 8673438 - 8673302
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataa 129  Q
    ||||| |||||||| |||| |||| ||||||||||| | ||||||||||||||| | |||||||||||||||| ||| |||| ||  || |||   ||||    
T  8673438 attatagagaaaatgaaaaagagagcaaattgaatgtactttgcatttaattttcctttggaaaagataatttttttaaaaacactaaaaaatatgataa 8673339  T
Q  130 aaattggtctttttt-cttatattttgagacaaagaa 165  Q
    || |||||||||||| |||||| |||| |||||||||    
T  8673338 aagttggtcttttttgcttataatttgggacaaagaa 8673302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 17336799 - 17336713
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacata 117  Q
    ||||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||||||||    
T  17336799 attatagagtaaatgaaaaggagagcaaattgaatgcactttgcatttaattttcctttagaaaagataattt-tttgaaaaaacata 17336713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 40487794 - 40487859
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataat 122  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  40487794 aaattgaatgcaacttgcattgaattttacattggaaaagatgatttgtttg-aaaaacataataat 40487859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 41362410 - 41362498
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| | || |||||| |||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  41362410 attatagagaaaatgaaaaagtgagcaaattaaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataat 41362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 16643457 - 16643386
Alignment:
Q  14 ttctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttac 85  Q
    ||||||||||| ||  |||||||||||||||||||||| || || ||||||| |||||||||||||||||||    
T  16643457 ttctcattggtcaatgattatggagaaaataaaaaggaaaataacttgaatgtaatttgcatttaattttac 16643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 17314887 - 17314799
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| ||||||||| ||||||||||||| |||| ||||||||||   || |||||||||| || ||||||||||||||||    
T  17314887 attatagagaaaatgaaaaggagagcaaattgaatgcactttggatttaattttcttttagaaaagataagtt-tttgaaaaaacataat 17314799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 41791563 - 41791651
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||   ||||||||||| |||| |||||||||| |||||    
T  41791563 attatagagaaaataaaaaagagagcaaattgaatgcattttacatttaattttcttttggaaaagatgattt-tttgaaaaaagataat 41791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 17713252 - 17713143
Alignment:
Q  58 attgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaattggtctttttt-cttatatttt 154  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||| |||||| || |||||  |||   |||||| |||||||||||| |||||| |||    
T  17713252 attgaatgcactttgcatttaattttcctttggaaaagataatttg-ttgaaacaatataattaaatatgataaaagttggtcttttttacttataattt 17713154  T
Q  155 gagacaaagaa 165  Q
    | |||||||||    
T  17713153 gggacaaagaa 17713143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 34899979 - 34899894
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||| || |||| | ||||||||||||| |||| |||||||||||||| || |||||||| |||| ||||||| ||||||||    
T  34899979 atggagaaagtataaagaaaaacaaattgaatgaaattagcatttaattttactttagaaaagatgattt-tttgaaataacataat 34899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 31133765 - 31133826
Alignment:
Q  108 aaaaaacataataatgacataaaaattggtctttt-ttcttatattttgagacaaagaatat 168  Q
    ||||||||||| |||  ||||||| |||||||||| ||||||||||||||||||||||||||    
T  31133765 aaaaaacataacaatagcataaaagttggtctttttttcttatattttgagacaaagaatat 31133826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 16635488 - 16635361
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-----aaaaaacataataatgacataaaaattggt 137  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||| || |||||||| |||| ||||     |||||||||| ||||  ||||||| |||||    
T  16635488 taaaaaggaaaacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt-tttgaagaaaaaaaacatagtaatagcataaaagttggt 16635390  T
Q  138 cttt-tttcttatattttgagacaaagaa 165  Q
    |||| || ||||||||||  |||||||||    
T  16635389 ctttcttacttatattttaggacaaagaa 16635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 28497641 - 28497704
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| | ||||||||||||| | |||||||||||||||| ||||||| ||||||||    
T  28497641 caaattgaatgcactatgcatttaattttcctttggaaaagataattt-tttgaaataacataat 28497704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 16635871 - 16635786
Alignment:
Q  59 ttgaatgcaatttgcatttaa-ttttacattggaaaagataatttgtttgaa--aaaacataataatgacataaaaattggtcttt 141  Q
    ||||||| ||||||||||||| |||||| || |||||||| |||| ||||||  |||||||| ||||  |||||||||||||||||    
T  16635871 ttgaatgaaatttgcatttaatttttacttttgaaaagatgatttttttgaaagaaaacatagtaatagcataaaaattggtcttt 16635786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 26954520 - 26954632
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacata--ataatgacataaaaattggtctttttt-cttatat 151  Q
    |||| |||||||| |||||||||||||||   |||||||||||||||| ||||||| ||||||  | |||   |||||| |||||||||||| ||||||     
T  26954520 caaaatgaatgcactttgcatttaattttcttttggaaaagataattt-tttgaaacaacatagtaaaatatgataaaatttggtcttttttacttataa 26954618  T
Q  152 tttgagacaaagaa 165  Q
    |||| |||||||||    
T  26954619 tttgggacaaagaa 26954632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 16635756 - 16635640
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-----aaaaaacataataatgacataaaaattggt 137  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||| || |||||||| |||| ||||     |||||||||| ||||  ||||||| |||||    
T  16635756 taaaaaggaaaacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt-tttgaagataaaaaacatagtaatagcataaaagttggt 16635658  T
Q  138 cttt-tttcttatatttt 154  Q
    |||| || ||||||||||    
T  16635657 ctttcttacttatatttt 16635640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 16643284 - 16643195
Alignment:
Q  53 aacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgttt-gaaaaaacataataatgacataaaaattggtcttt 141  Q
    ||||| ||||||  ||||||||||| ||||||| || |||||||| ||||||||  ||||||||||||||| | |||||| ||| |||||    
T  16643284 aacaacttgaatataatttgcattttattttacttttgaaaagatgatttgtttaaaaaaaacataataataagataaaagttgatcttt 16643195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 27819715 - 27819632
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaaca 115  Q
    |||| |||||||||||| ||||| |||||| |||| | ||||||||||||||| | ||| ||||||| |||| ||||||| ||||    
T  27819715 ttatagagaaaataaaagggagagcaaattaaatgtagtttgcatttaattttcctttgaaaaagatgattt-tttgaaataaca 27819632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 14693434 - 14693376
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaa 94  Q
    |||||||| |||| |||| ||||||||||||| |||| |||||||||| | ||||||||    
T  14693434 gagaaaatgaaaaagagagcaaattgaatgcactttgtatttaatttttctttggaaaa 14693376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 4038984 - 4039037
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||| |||||||||||    
T  4038984 attatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 4039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 29147340 - 29147393
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||| ||||| |||||| |||||| |||||||||||||||    
T  29147340 attatagagaaaatgaaatggagatcaaattaaatgcagtttgcatttaatttt 29147393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 36190828 - 36190775
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||  ||||  |||||||||| ||||||||||||||||||    
T  36190828 ttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 36190775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 2628268 - 2628355
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| |||||||| |||  |||| |||||||||| || |||||||| |||||| | ||| |||||||||||| ||||||| || |||||    
T  2628268 ttattgagaaaatgaaagagagagcaaattgaattcactttgcattaaattttcctttgaaaaagataattt-tttgaaacaatataat 2628355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 14576249 - 14576301
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  14576249 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 14576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 40486588 - 40486628
Alignment:
Q  23 gttaaaaattatggagaaaataaaaaggagaacaaattgaa 63  Q
    ||||||||||| ||||||||||||||| |||| ||||||||    
T  40486588 gttaaaaattaaggagaaaataaaaagaagaataaattgaa 40486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 45598975 - 45598782
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45598975 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 45598876  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  |||||||||| ||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| ||||||    
T  45598875 acataataatagcataaaaattagtcttttttgcttatattttgagacaaagaacatgagatttttttgcttatattttaggacggagggagta 45598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 43107948 - 43108105
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  43107948 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 43108047  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  43108048 aacataataataacataaaagttggtcttttttgcttatattttgagacaaagaatat 43108105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 41889242 - 41889049
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  41889242 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgctttgaattttacattggaaaagatgatttgtttgaaaaa 41889143  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||| ||||||| ||| | |||||| |||||||||||||||||||||||| | |       ||||||||||||||||||||||||||    
T  41889142 acataataatggcataaaagttgattttttttgcttatattttgagacaaagaatatgatatttttttgcttatattttaagacggatggagta 41889049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 35181263 - 35181070
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35181263 attctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 35181164  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||||||||| |||||||| ||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  35181163 acataataatagcataaaagttggtcttttttgcttatattctgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 35181070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 23106524 - 23106367
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23106524 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 23106425  T
Q  113 acataataatgacataaaaattggtctttttt--cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| || |||||||||  |||||||||||||||||| |||||    
T  23106424 acataataatagcataaaagttagtctttttttgcttatattttgagacaaataatat 23106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 47383477 - 47383324
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  47383477 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaaaaa 47383378  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||    
T  47383377 acataataatatcataaaagttggtattttttgcttatattttgagacaaagaa 47383324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 34808290 - 34808134
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  34808290 attcttattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttacgttgaaaaagatgatttgtttgaaaaa 34808191  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||| |||||||| |||||||||||| |||||||||| |||||||||||||    
T  34808190 acataataataacataaaagttggtcttttttgcttatattttaagacaaagaatat 34808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 40560453 - 40560260
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  40560453 attctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 40560354  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||  ||||||||| ||||||||||  |||||||||||||||||||| ||||||       |||||||||||| |||||| ||||||    
T  40560353 acataaaaatagcataaaaatgggtcttttttgattatattttgagacaaagaaaataagatttttttgcttatattttaggacggagggagta 40560260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 48879459 - 48879303
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  48879459 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttttttgaaaaa 48879360  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||| |||||||| |||||||||||| |||||||||| ||| ||| |||||    
T  48879359 acataataataacataaaagttggtcttttttacttatattttaagataaaaaatat 48879303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 44600513 - 44600323
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||    
T  44600513 tcattggttaaaaattatggagaaaacaaaaaagagaacaaattgaatgcaacttgcatttaattttacactggaaaagatgatttatttgaaaaaacat 44600414  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| |||||||    
T  44600413 aataataacataaaagttggtcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagtac 44600323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 21654164 - 21654357
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  21654164 attctcattggttaaaaattatggagaaaatgaaaaggagaacaaattgaatgtaatttgcatttaattttacattggaaaaggtgatttgtttgaaaaa 21654263  T
Q  113 acataataatgacataaaaattggt-cttttttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| ||||| ||||||  ||||||||||||||||||| ||| |||       |||||||||||| |||||| ||||||    
T  21654264 acataataatagcataaaagttggtcctttttgtttatattttgagacaaagattatgagatttttttgcttatattttaggacggagggagta 21654357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 40583216 - 40583068
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  40583216 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaa 40583117  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagaca 160  Q
    |||||||||| |||||||| ||||| |||||| ||||||||||||||||    
T  40583116 acataataataacataaaagttggtattttttgcttatattttgagaca 40583068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 41815736 - 41815929
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||| |||||||||    
T  41815736 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttacatttaattttacattggaaaatatgatttatttgaaaaa 41815835  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| ||| |||||||| ||||||||||||||||||||| || |||       |||||||||||| |||||| ||||||    
T  41815836 acataataatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagta 41815929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 3157507 - 3157358
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||     
T  3157507 attctcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaat 3157408  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaa 161  Q
    ||||||||||  ||||||| || ||||||||| |||||||||||||||||    
T  3157407 acataataatagcataaaagttagtcttttttgcttatattttgagacaa 3157358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 36576485 - 36576336
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  36576485 tcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacat 36576386  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||  ||||||| || ||||||||| |||||||||||||||||||||    
T  36576385 aataatagcataaaagtttgtcttttttacttatattttgagacaaagaa 36576336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 42617742 - 42617586
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  42617742 attctaattggttaaaaattatggagaaaataaaaaggagcacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaa 42617643  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||| | || ||||||||| |||||||||||||| |||||||||    
T  42617642 acataataatatcataagagtttgtcttttttgcttatattttgagaaaaagaatat 42617586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 22111373 - 22111514
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  22111373 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaa 22111472  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattt 153  Q
    |||||||||| |||||||| ||||| |||||| |||||||||    
T  22111473 acataataataacataaaagttggtattttttgcttatattt 22111514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 19933102 - 19933251
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19933102 tcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 19933201  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    || |||  ||||||| ||  |||||||| |||||||||||||| ||||||    
T  19933202 aaaaatagcataaaagtttatcttttttgcttatattttgagataaagaa 19933251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 19964241 - 19964390
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19964241 tcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 19964340  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    || |||  ||||||| ||  |||||||| |||||||||||||| ||||||    
T  19964341 aaaaatagcataaaagtttatcttttttgcttatattttgagataaagaa 19964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 23731631 - 23731483
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  23731631 attctcgttgattaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 23731532  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagaca 160  Q
    |||||| |||  ||||||| ||| |||||||| ||||||||||||||||    
T  23731531 acataaaaatagcataaaagttgatcttttttgcttatattttgagaca 23731483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 32491154 - 32491340
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  32491154 tcattggttaaaaattatggagaaaacaaaaaggagaacaaattaaatgcaacttgcatttaattttacattcgaaaagatgatttgtttgaaaaaacat 32491253  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggag 203  Q
    || |||  ||||||| ||||| |||||| |||||||||| |||||||||| ||||||       |||||||||||| |||||| ||||    
T  32491254 aa-aatagcataaaagttggttttttttgcttatattttcagacaaagaaaataagatttttttgcttatattttaggacggagggag 32491340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 48937932 - 48938086
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  48937932 attcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaa 48938031  T
Q  112 aacataataatgacataaaaattggtcttttttcttatattttgagacaaagaatat 168  Q
    |||||||||||  || |||| |||   ||||| |||||||||| |||||||||||||    
T  48938032 aacataataatagcacaaaagttg--atttttgcttatattttaagacaaagaatat 48938086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 48942958 - 48943112
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  48942958 attcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaa 48943057  T
Q  112 aacataataatgacataaaaattggtcttttttcttatattttgagacaaagaatat 168  Q
    |||||||||||  || |||| |||   ||||| |||||||||| |||||||||||||    
T  48943058 aacataataatagcacaaaagttg--atttttgcttatattttaagacaaagaatat 48943112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 18206362 - 18206467
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  18206362 attctcattggttaaaaattatggaaaaaataaaaaggagaacaaattaaatacaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 18206461  T
Q  113 acataa 118  Q
    ||||||    
T  18206462 acataa 18206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 41890285 - 41890496
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  41890285 attctcattaattaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaa 41890384  T
Q  113 a------------------cataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaag 193  Q
    |                  |||||||||  |||||||||||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |    
T  41890385 aacataataatacgttcaccataataatagcataaaaattggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttagg 41890484  T
Q  194 acggatggagta 205  Q
    ||||| ||||||    
T  41890485 acggaaggagta 41890496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 9818539 - 9818399
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||||||||||| ||||||||||||||    
T  9818539 attctcattggttaaaaattatggagaaaataaaaaggagaacaaatgg-----------catttaattttacattggaaaagatgatttgtttgaaaaa 9818451  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
      | |||||| |||||||| |||||||||||| |||||||||||||| ||||||    
T  9818450 --aaaataataacataaaagttggtcttttttgcttatattttgagaaaaagaa 9818399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 10720464 - 10720324
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||||||||||| ||||||||||||||    
T  10720464 attctcattggttaaaaattatggagaaaataaaaaggagaacaaatgg-----------catttaattttacattggaaaagatgatttgtttgaaaaa 10720376  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
      | |||||| |||||||| |||||||||||| |||||||||||||| ||||||    
T  10720375 --aaaataataacataaaagttggtcttttttgcttatattttgagaaaaagaa 10720324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 39348843 - 39348708
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataa 129  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| | || ||||||| |||| ||||||  |||||    
T  39348843 attatcgagaaaatagaaaggagaacaaattgaatacaatttgcatttaattttactttggaaaagattaattttttgaaacaacacaataatagcataa 39348744  T
Q  130 aaattggtctttttt-cttatattttgagacaaaga 164  Q
    || |||||||||||| |||||||||||  |||||||    
T  39348743 aagttggtcttttttgcttatattttggtacaaaga 39348708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 33153110 - 33153013
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaa 110  Q
    ||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  33153110 attcttattggttaatgattatggagaaaatagaaaggagaacaaattgaatgcaatttgcatttaattttactttgaaaaagataatttttttgaaa 33153013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 7989351 - 7989432
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaa 94  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  7989351 attctcattggttaaaaattatgaagaaaataaaaaggataacaaattgaatgcaacttgcatttaattttacattgaaaaa 7989432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 30082424 - 30082319
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||  |||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |    
T  30082424 attcttattggttaatgattatggagagaatagaaaagagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttttttgaaata 30082325  T
Q  113 acataa 118  Q
    ||||||    
T  30082324 acataa 30082319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 35084144 - 35084253
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| ||||| |||  |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| ||| |||| | |||| ||    
T  35084144 attcttattggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgcatttaattttactttggaaaggatgatttttatgaagaa 35084243  T
Q  113 acataataat 122  Q
    ||||||||||    
T  35084244 acataataat 35084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 39337584 - 39337445
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataa---tttgtttgaaaaaacataataatgaca 126  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||  ||||||||||| |   ||| ||||||| |||| ||||||  ||    
T  39337584 attatggagaaaatagaaaggagaacaatttgaatgcaatttgcatttagttttaatttggaaaagatgattttttttttgaaacaacacaataatagca 39337485  T
Q  127 taaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||| ||||| |||||| ||||||||||| |||||||||    
T  39337484 taaaagttggtattttttgcttatattttgggacaaagaa 39337445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 35888070 - 35888203
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||||| ||||| | |||||||||||||||| ||||||||||||||||  |||   ||    
T  35888070 attatagagaaaataaaaaagagagcaaattgaatgcactttgcattttattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 35888168  T
Q  128 aaaaattggtcttttttcttatattttgagacaaa 162  Q
     ||| |||||||||||||||||| |||| ||||||    
T  35888169 gaaagttggtcttttttcttataatttgggacaaa 35888203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 31769063 - 31769189
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||||  |||   ||    
T  31769063 attatagagaaaataaaaatgagagcaaattgaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaatatgat 31769161  T
Q  128 aaaaattggtcttttttcttatattttg 155  Q
    |||| ||||||||||| |||||| ||||    
T  31769162 aaaagttggtctttttgcttataatttg 31769189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 28608444 - 28608363
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaa 94  Q
    ||||| |||||| ||  |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  28608444 attcttattggtcaattattatggagagaatagaaaagagaacaaattgaatgcaatttgcatttaattttactttggaaaa 28608363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 29236117 - 29236215
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataa 118  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||||||  |||||||||||| | | ||||||| |||| ||||||| |||||||    
T  29236117 attggttaatgattatggagagaataaaaaggagaa-aaattgaatgcaatttatatttaattttacttcgtaaaagatgatttttttgaaataacataa 29236215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 48339322 - 48339390
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagata 98  Q
    ||||||||||||||| |||| |||| ||||| |||||| ||||||||||||||||  ||||||||||||    
T  48339322 attatggagaaaatagaaagaagaataaattaaatgcagtttgcatttaattttagtttggaaaagata 48339390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 7989425 - 7989483
Alignment:
Q  105 ttgaaaaaacataataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||    
T  7989425 ttgaaaaaacataataataacataaaagttggtcttttttacttatattttgaaacaaa 7989483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 18800834 - 18800922
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataa 118  Q
    |||||||||  |||| |||  ||| ||||||||||||||||| ||||||||||||| ||| ||||||| ||||  |||||| |||||||    
T  18800834 attatggagggaatagaaataagagcaaattgaatgcaatttacatttaattttactttgaaaaagatgattttcttgaaataacataa 18800922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 38260388 - 38260287
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||   ||||| |||||||| |||  |||| |||||| |||||| |||||||||||||||   |||||||||||||||| ||||||| || ||    
T  38260388 tcattggttatttattattgagaaaatgaaagagagagcaaattaaatgcactttgcatttaattttcatttggaaaagataattt-tttgaaacaatat 38260290  T
Q  117 aat 119  Q
    |||    
T  38260289 aat 38260287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 28941277 - 28941319
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagat 97  Q
    |||||| ||||||||||||||||||||| || |||||||||||    
T  28941277 caaatttaatgcaatttgcatttaatttcactttggaaaagat 28941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 25944634 - 25944581
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||  ||||  |||||||||| ||||||||||||||||||    
T  25944634 ttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 25944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 39170593 - 39170506
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||  || | ||||||||||||| ||||||||||||||| | || ||||||||||||| |||| || ||||||||    
T  39170593 attattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt-cttttgaaaagataattt-tttgtaacaacataat 39170506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 3778012 - 3777968
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataa 99  Q
    ||||||||||||| ||| ||||||||||| | |||||||||||||    
T  3778012 caaattgaatgcacttttcatttaattttcctttggaaaagataa 3777968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 37767139 - 37767187
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat 97  Q
    |||||||||||| ||||||||||||| ||||||| |  |||||||||||    
T  37767139 ggagaacaaattaaatgcaatttgcacttaatttcattttggaaaagat 37767187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 30086633 - 30086826
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  30086633 attctcattggctaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaa 30086732  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  |||       ||||||||||||||||||| ||||||    
T  30086733 acataataatgacataaaagttggtcttttttacttatattttgagacaaagaatacgagatttttttgcttatattttaagacggagggagta 30086826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 8146098 - 8146254
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8146098 attctcattagttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 8146197  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||| |||||||| |||||||||||| |||||||||| |||||||||||||    
T  8146198 acataataataacataaaagttggtcttttttgcttatattttaagacaaagaatat 8146254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 12638963 - 12638771
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  12638963 attctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaa 12638864  T
Q  113 acataataatgacataaaaattggtcttttttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| || ||||||||||||||||||||||| ||| ||||| |||       |||||||||||| |||||| ||||||    
T  12638863 acataataatagcataaaagttagtcttttttcttatattttgagataaataatatgagatttttttgcttatattttaggacggaaggagta 12638771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 31690709 - 31690861
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31690709 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 31690808  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||  ||||||| ||||||||||||  ||||||||||||||||| |||||    
T  31690809 aataatagcataaaagttggtcttttttgtttatattttgagacaaaaaatat 31690861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 42365109 - 42364919
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42365109 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 42365010  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
        || ||| |||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| |||||||    
T  42365009 ----aacaataacataaaagttggtcttttttgcttatattttgagacaaagaatatgagattcttttgcttatattttaggacggagggagtac 42364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 13146803 - 13146610
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  13146803 attctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaaaaa 13146704  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| ||||||||||||  ||||||||||| ||||||||||| |||       |||||||||||| |||||| ||||||    
T  13146703 acataataatagcataaaagttggtcttttttgtttatattttgatacaaagaatatgagatttttttgcttatattttaggacggagggagta 13146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 37066308 - 37066464
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37066308 attctcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaaaaa 37066407  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    | ||||||||  || ||||||| ||||||||| |||||||||| |||||||||||||    
T  37066408 atataataatagcaaaaaaattagtcttttttgcttatattttaagacaaagaatat 37066464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 8541649 - 8541799
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8541649 attctcattggttaaaaattatggagaaaataaaatggagaacaaatttaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 8541748  T
Q  113 acataataatgacataaaaattggtc-ttttttcttatattttgagacaaa 162  Q
    |||||||||| |||||||| |||||| |||||| ||||||||| |||||||    
T  8541749 acataataataacataaaagttggtctttttttgttatattttaagacaaa 8541799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 16286168 - 16286321
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  16286168 attctcattggttaaaaattatggagaaaataaaaaggagaacaaactaaatgcaacttgcatttaattttacattgaaaaagataatttgtttgaaaaa 16286267  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| || ||||||||| |||||||||||||||||||||    
T  16286268 acataaaaattgcataaaagtttgtcttttttacttatattttgagacaaagaa 16286321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 20914933 - 20914780
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  20914933 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 20914834  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| ||||| |||||| |||||||||| ||||||||||    
T  20914833 acataaaaatagcataaaagttggtattttttgcttatattttaagacaaagaa 20914780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 35462803 - 35462956
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||    
T  35462803 attctcattggttaaaaattatgaagaaaataaaaaggataataaattgaatgaaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaa 35462902  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  35462903 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 35462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 24432485 - 24432637
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||||||    
T  24432485 attctcattggttaaaaattatggagaaaataaaaaggataacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaa 24432584  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaaga 164  Q
    | |||| |||   |||||| ||||| |||||| ||||||||||||||||||||    
T  24432585 atataaaaatagtataaaagttggttttttttgcttatattttgagacaaaga 24432637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 31316886 - 31317028
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  31316886 attctcattggttaaaaattatggagaaaataaaaaggtgaacagattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 31316985  T
Q  113 acataataatgacataaaaattggtctttttt-cttatatttt 154  Q
    |||||| ||| |||||||| ||| |||||||| ||||||||||    
T  31316986 acataaaaataacataaaagttgatcttttttgcttatatttt 31317028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 25962533 - 25962730
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgca----atttgcatttaattttacattggaaaagataatttgtttga 108  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    | |||||||||||||||||||| ||||||| ||||||||||    
T  25962533 attctcattggttaaaaattatggagaaaataaaaagtagaacaaattaaatgcaaatgacttgcatttaattttacattgaaaaagatgatttgtttga 25962632  T
Q  109 aaaaacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||  ||||||| || || |||||| ||||||||||||||||||||| || | |       ||||||||||||||||||| ||||||    
T  25962633 aaaaacataaaaatagcataaaagtttgtattttttgcttatattttgagacaaagaaaatgatatatttttgcttatattttaagacggaaggagta 25962730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 17825283 - 17825425
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  17825283 attctcattggttaaaaattatggagaaaataaaaaggaggacaaattgaatgtaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaa 17825382  T
Q  113 acataataatgacataaaaattggtctttttt--cttatattttg 155  Q
      |||||| |  |||||||||| |||||||||  |||||||||||    
T  17825383 --ataatattagcataaaaatttgtcttttttgccttatattttg 17825425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 24439642 - 24439493
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgt-ttgaaaaaaca 115  Q
    ||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| | |||||||||||    
T  24439642 tcattggctaattattatggaaaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttactttgg-aaagatgatttttgttgaaaaaaca 24439544  T
Q  116 taataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||    
T  24439543 taataataacataaaagttgatcttttttgcttatattttgcgacaaagaa 24439493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 8144008 - 8143858
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||  |||||||||||| ||| ||||||  |||| |||||||||    
T  8144008 attctcattggttaatgattatggagaaaataaaatgtagaacaaattgaatgcaatttatatttaattttactttgaaaaagaagatttatttgaaaaa 8143909  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    ||||||||||  ||||||| ||| |||||||| |||||||| || ||||||    
T  8143908 acataataatagcataaaagttgatcttttttgcttatattatgggacaaa 8143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 2002218 - 2002323
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||| |||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||| |    
T  2002218 attcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgcatttaattttattttggaaaagatgatttttttgaaata 2002317  T
Q  113 acataa 118  Q
    ||||||    
T  2002318 acataa 2002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 20452543 - 20452664
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataaaaattggtctttttt--ct 146  Q
    |||||||||||||||| |||||| |||||||||||||| || || |||| | || |||||||||| |||||||   ||||||||||| ||||||||  ||    
T  20452543 ggagaacaaattgaatacaatttacatttaattttacaatgaaagagatgaattatttgaaaaaatataataacagcataaaaattgatctttttttact 20452642  T
Q  147 tatattttgagacaaagaatat 168  Q
    |||||||||| ||||| |||||    
T  20452643 tatattttgaaacaaacaatat 20452664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 3463917 - 3464006
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   |||||||| ||||||| ||| ||||||||||||    
T  3463917 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttttcttggaaaaaataatttttttaaaaaaacataat 3464006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 28907122 - 28907039
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||| |||||||||||| ||||| ||||||||||    
T  28907122 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataat 28907039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 28943517 - 28943434
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||| |||||||||||| ||||| ||||||||||    
T  28943517 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataat 28943434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 8959699 - 8959611
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| ||||||||  ||| |||| ||||||||| ||| ||| ||||||||||| | |||||||||||||||| ||||||||||||||||    
T  8959699 attatagagaaaatggaaaagagagcaaattgaacgcactttacatttaatttttctttggaaaagataattt-tttgaaaaaacataat 8959611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 16153447 - 16153535
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||| | |||| |||| |||||| |||||| |||| |||||||||| | |||||||||||||||| ||||||||||||||||    
T  16153447 attatagagaaagtgaaaaagagagcaaattaaatgcactttgtatttaattttcctttggaaaagataattt-tttgaaaaaacataat 16153535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 8506471 - 8506408
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||| ||||||||    
T  8506471 caaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaacaacataat 8506408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 1144624 - 1144680
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||    
T  1144624 caaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaa 1144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 10154055 - 10154118
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| ||||||||||||||| | |||||| ||||||||| ||||||| ||||||||    
T  10154055 caaattgaatgcactttgcatttaatttttctttggaagagataattt-tttgaaacaacataat 10154118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 29307317 - 29307433
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaattggtctttttt-cttatat 151  Q
    ||||||||||||| ||||||||||||||| | |||||||| ||||||| |||  |||||||||||  |||   |||||| || ||||||||| ||||||     
T  29307317 caaattgaatgcactttgcatttaattttcctttggaaaa-ataattt-tttagaaaaacataattaaatatgataaaagttagtcttttttgcttataa 29307414  T
Q  152 tttgagacaaagaatataa 170  Q
    ||||| |||||||| ||||    
T  29307415 tttgaaacaaagaaaataa 29307433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 32433616 - 32433573
Alignment:
Q  126 ataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  32433616 ataaaaatttgtcttttttgcttatattttgagacaaagaatat 32433573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 165
Target Start/End: Original strand, 35275346 - 35275463
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaattggtcttttttct 146  Q
    |||||| |||||||||| | ||||||||||||||    ||| ||||||| |||| ||||||||||||||||  |||   |||||| ||||| |||||||     
T  35275346 ggagaaaaaattgaatgtagtttgcatttaatttctttttgaaaaagatgattt-tttgaaaaaacataattaaatatgataaaatttggtattttttcc 35275444  T
Q  147 tatattttgagacaaagaa 165  Q
    |||| |||| |||||||||    
T  35275445 tataatttgggacaaagaa 35275463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 42273705 - 42273654
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||| |||  |||||  ||||||||||||||||||||||||||||    
T  42273705 ttatggagaaaatgaaagagagaa--aattgaatgcaatttgcatttaatttta 42273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 445990 - 446043
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||| ||||||||| |||  ||||| |||||||||||||||| ||||||||||    
T  445990 aattacggagaaaatgaaagagagaaaaaattgaatgcaattttcatttaattt 446043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 6391896 - 6391840
Alignment:
Q  62 aatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| |||||||  | |||||||||||||||| ||||||| ||||||||    
T  6391896 aatgcaatttgcaattaatttctctttggaaaagataattt-tttgaaataacataat 6391840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 15006413 - 15006450
Alignment:
Q  47 aaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  15006413 aaggataacaaattgaatgcaatttgtatttaatttta 15006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 31126281 - 31126099
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  31126281 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacat 31126182  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacgga 198  Q
    ||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| |||       |||||||||||||||||||    
T  31126181 aataatggcataaaagttggtcttttttgtttatattttgagacaaagaatatgagatttttttgcttatattttaagacgga 31126099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 1335177 - 1335027
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataa 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  1335177 attggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataa 1335078  T
Q  119 taatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1335077 taataacataaaaattggtcttttttgcttatattttgagacaaagaatat 1335027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 46580609 - 46580453
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  46580609 attctcattgattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgtaaaatatgatttgtttgaaaaa 46580510  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  46580509 acataataatggcataaaagttggtcttttttacttatattttgagacaaagaatat 46580453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 37324131 - 37324328
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg----a 108  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    |    
T  37324131 attctcattggttaaaaattatggagaaaataaaaagggaaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 37324230  T
Q  109 aaaaacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||  ||       ||||||||||||||||||||||||||    
T  37324231 aaaaacataataatgacataaaagttggtcttttttgcttatattttaagacaaagaatatgtgatttttttgcttatattttaagacggatggagta 37324328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 21654314 - 21654123
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aaaaca 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  21654314 tcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaaca 21654215  T
Q  116 taataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| ||| || |||||||    
T  21654214 taataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacagagggagtac 21654123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 26641159 - 26641345
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  26641159 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttaccttgaaaaagatgatttgtttgaaaaa 26641258  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacgga 198  Q
    ||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||||| |||       |||||||||||| ||||||    
T  26641259 acataataatagcataaaagttggtgttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacgga 26641345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 23513640 - 23513447
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  23513640 attctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaa 23513541  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  23513540 acataataatagcataaaagttggtattttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 23513447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 55400811 - 55400655
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  55400811 attctcattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 55400712  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| |  ||||||||| ||||||||||||||||||||||||    
T  55400711 acataataatagcataaaagtaagtcttttttgcttatattttgagacaaagaatat 55400655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 13541343 - 13541190
Alignment:
Q  20 ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13541343 ttggttaaaaattatagagaaaataaaaaggaaaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgttcgaaaaaacataat 13541244  T
Q  120 aatgacataaaaattggtctt-ttttcttatattttgagacaaagaatataaga 172  Q
    ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  13541243 aataacataaaagttggtctttttttcttatattttgagacaaagaatataaga 13541190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 53020256 - 53020099
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa-aa 111  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||    
T  53020256 attctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 53020157  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||||  ||||||| ||||| |||||| |||||||||||||||||| |||||    
T  53020156 aacataataatagcataaaagttggtattttttacttatattttgagacaaaaaatat 53020099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 51255259 - 51255101
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  51255259 attctcattagttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttagattggaaaagatgatttgtttgaaaaa 51255160  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataaga 172  Q
    |||||  ||| |||||||| ||| |||||||| ||||||||||||||||||||| ||||||    
T  51255159 acata--aataacataaaagttgatcttttttacttatattttgagacaaagaaaataaga 51255101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 28793235 - 28793084
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaa-ttttacattggaaaagataatttgtttgaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  28793235 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttttacattagaaaagatgatttgtttgaaaa 28793136  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    ||||||| |||  ||||||| |||||||||||| ||||||||||||||||||    
T  28793135 aacataaaaatagcataaaagttggtcttttttgcttatattttgagacaaa 28793084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 51426688 - 51426534
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaa--aaaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||  |||||    
T  51426688 tcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaattttacattagaaaagatgatttgtttgaaaaaaaac 51426589  T
Q  115 ataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||| ||| |||||||| |||||||||||| |||||||||| |||||||||||||    
T  51426588 ataagaataacataaaagttggtcttttttgcttatattttaagacaaagaatat 51426534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 32322286 - 32322439
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  32322286 attctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgtatttaattttacattgaaaaagataatttgtttgaaaaa 32322385  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  |||||||  | ||||||||| |||||||||||||||||||||    
T  32322386 acataaaaatagcataaaatctagtcttttttacttatattttgagacaaagaa 32322439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 45781470 - 45781317
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  45781470 attctcattggttaaaaattatggagaagataaaaatgagaacaaattaaatgcaacttgaatttaattttacattggaaaagatgatttgtttgaaaaa 45781371  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||||| |||  ||||||| ||| |||||||| |||||||||||||||||||||    
T  45781370 acataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaa 45781317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 46296124 - 46296266
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  46296124 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacatcggaaaagatgatttgtttgaaaaa 46296223  T
Q  113 acataataatgacataaaaattggtctttttt-cttatatttt 154  Q
    |||||| |||  ||||||| ||| |||||||| ||||||||||    
T  46296224 acataaaaatagcataaaagttgatcttttttgcttatatttt 46296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 16739207 - 16739355
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||     |||||||||||||||||||||||| ||||||||||||||    
T  16739207 attctcattggttaaaaattatggagaaaataaaaaggaaaacaaattaaatgcaa-----atttaattttacattggaaaagatgatttgtttgaaaaa 16739301  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    | ||||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  16739302 atataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 16739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 52172057 - 52172204
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||||| ||||    
T  52172057 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 52172156  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgaga 158  Q
    ||||||| |||  ||||||||||  |||||||| ||||||||||||||    
T  52172157 aacataaaaatagcataaaaattaatcttttttgcttatattttgaga 52172204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 49068124 - 49068018
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  49068124 attctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 49068025  T
Q  113 acataat 119  Q
    |||||||    
T  49068024 acataat 49068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 43576026 - 43575837
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||| |||||||||| |||||||    
T  43576026 tcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttga-aaaacat 43575928  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagtac 206  Q
    || |||  ||||||| ||| |||||||| |||||||||||||||||| || |  |||       |||||||||||| ||||||||||||||    
T  43575927 aaaaatagcataaaagttgatcttttttgcttatattttgagacaaaaaaaaagagatttttttgcttatattttaggacggatggagtac 43575837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 32 - 204
Target Start/End: Complemental strand, 46820103 - 46819930
Alignment:
Q  32 tatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataatgacataaaa 131  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||  |||||||    
T  46820103 tatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataaaaatagcataaaa 46820004  T
Q  132 attggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagt 204  Q
     ||| ||||||||  |||||||||||||||||||| || |||       |||||||||||| |||||| |||||    
T  46820003 gttgatcttttttatttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagt 46819930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 52252109 - 52252004
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  52252109 attctcattgattaaaaattatggagaaaataaaaaagagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 52252010  T
Q  113 acataa 118  Q
    ||||||    
T  52252009 acataa 52252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 36189053 - 36189206
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtt-tgaaaa 111  Q
    |||||||||||||||  ||| || | |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  |||| || ||||||    
T  36189053 attctcattggttaatgattgtgaataaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttactttggaaaagaagattttttgtgaaaa 36189152  T
Q  112 aacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||| ||||||||  ||||||||||| ||||||||||| |||||||||    
T  36189153 aacataataataacataaaagatggtcttttttgcttatattttg-gacaaagaa 36189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 34022622 - 34022501
Alignment:
Q  85 cattggaaaagataatttgtttgaaaaaacataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngctt 183  Q
    ||||||||||||| |||||||||||||||||||| |||  |||||||| |||| |||||| ||||||||||||||||||||| || |||       ||||    
T  34022622 cattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaaaatggttttttttgcttatattttgagacaaagaaaatgagatttttttgctt 34022523  T
Q  184 atattttaagacggatggagta 205  Q
    |||||||| |||||||||||||    
T  34022522 atattttaggacggatggagta 34022501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 2994479 - 2994616
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||  |||   ||    
T  2994479 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatacgat 2994577  T
Q  128 aaaaattggtc-ttttttcttatattttgagacaaagaa 165  Q
    |||| || ||| |||||||||||| |||| |||||||||    
T  2994578 aaaagtttgtcattttttcttataatttgggacaaagaa 2994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 21214298 - 21214161
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||   |||||||||||||| | ||||||||||||||||  ||||  ||    
T  21214298 attattgagaaaataaaaaagagagcaaattgaatgcactttgcatttaattttcatttggaaaagataatat-tttgaaaaaacataattaaatgtgat 21214200  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| ||| |||||||| |||||| |||| |||||||||    
T  21214199 aaaagttgatcttttttgcttataatttgggacaaagaa 21214161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 22456069 - 22456206
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||  |||   ||    
T  22456069 attatagagaaaatgaaaaagagagcaaattgaatgcattttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 22456167  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| |||||||||||| |||||| |||| || ||||||    
T  22456168 aaaagttggtcttttttgcttataatttgggataaagaa 22456206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 22479115 - 22479252
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||  |||   ||    
T  22479115 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 22479213  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| || ||||||||| |||||| |||| |||||||||    
T  22479214 aaaagtttgtcttttttgcttataatttgggacaaagaa 22479252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 45347760 - 45347815
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45347760 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaa 45347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 51309486 - 51309397
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataattt 102  Q
    ||||| |||||||||  |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  51309486 attcttattggttaatgattatggagagaatagaaaggggaacaaattgaatgcaatttgcatttaattttaatttagaaaagattattt 51309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 47444034 - 47444125
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataataat 122  Q
    ||||| |||||||| |||| || | ||||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||||| ||||    
T  47444034 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacatagtaat 47444125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 10252068 - 10251931
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||||| ||||||||| | |||||||||||||| | ||||||||||||||||  |||   ||    
T  10252068 attatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaattttcctttggaaaagataatct-tttgaaaaaacataattaaatatgat 10251970  T
Q  128 aaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    |||| ||||| |||||| |||||| ||||||||||||||    
T  10251969 aaaagttggtattttttgcttataatttgagacaaagaa 10251931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 30454786 - 30454873
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| |||||||| |||  |||| ||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||| ||||||||    
T  30454786 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaacaacataat 30454873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 48291870 - 48291791
Alignment:
Q  39 aaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||| |||| ||||||||||||| ||| ||||||||||| | |||||||||||||||| ||||||||||||||||    
T  48291870 aaaatgaaaaagagagcaaattgaatgcactttccatttaattttcctttggaaaagataattt-tttgaaaaaacataat 48291791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 49584016 - 49583890
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaat 133  Q
    |||||||| ||||  ||| ||||||||||||| ||| ||||||||||| | |||||||||||||||| ||||||||||||||||  |||   |||||| |    
T  49584016 gagaaaatgaaaaacagagcaaattgaatgcactttacatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagt 49583918  T
Q  134 tggtctttttt-cttatattttgagaca 160  Q
    ||||||||||| |||||| |||| ||||    
T  49583917 tggtcttttttgcttataatttgggaca 49583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 34022672 - 34022625
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaatt 60  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  34022672 attctcattggttaaaaattatagagaaaataaaaaggagaacaaatt 34022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 10114968 - 10114832
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||||| ||||||||| | |||||||||||||| || |||||||||||||||  |||   ||    
T  10114968 attatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaattttcctttggaaaagataatctg-ttgaaaaaacataattaaatatgat 10114870  T
Q  128 aaaaattggtcttttttcttatattttgagacaaagaa 165  Q
    |||| |||   ||||| |||||| ||||||||||||||    
T  10114869 aaaagttgtattttttgcttataatttgagacaaagaa 10114832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 10014326 - 10014238
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||||||||  |||  |||||||||||| ||||| ||||||||| | |||||||||||||| | ||||||||||||||||    
T  10014326 attatagagaaaataaaaaatagagtaaattgaatgcactttgcttttaattttcctttggaaaagataatct-tttgaaaaaacataat 10014238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 23209347 - 23209478
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacataaaaat 133  Q
    |||||||| ||| |||||||| | |||||||||||||||||||||||  | |||| |||||| |||| ||||||| ||||||||  |||   |||||| |    
T  23209347 gagaaaatgaaagggagaacataatgaatgcaatttgcatttaatttctctttgggaaagatgattt-tttgaaataacataattaaatatgataaaagt 23209445  T
Q  134 tggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||||||||| |||||| ||| ||||||||||    
T  23209446 tggtcttttttgcttataatttaagacaaagaa 23209478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 34194944 - 34194857
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| |||||||| |||  |||| |||| |||||||| ||||||||||||||| | |||||||||||||||| ||||||| ||||||||    
T  34194944 ttattgagaaaatgaaagagagagcaaactgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaacaacataat 34194857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 54725665 - 54725752
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||| ||||||||||||| |||| ||||||||||||| |||| ||||||||||   ||| |||||||||||| |||||||||| |||||    
T  54725665 ttattgagaaaataaaaaagagagcaaattgaatgcactttgtatttaattttcttttgaaaaagataattt-tttgaaaaaatataat 54725752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 29676514 - 29676596
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    |||||||| |||| || | || |||||||||| |||| |||||||||| | |||||||||||||||| ||||||||||||||||    
T  29676514 gagaaaatgaaaaagaaagcatattgaatgcactttgaatttaattttcctttggaaaagataattt-tttgaaaaaacataat 29676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 46303617 - 46303534
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaga 96  Q
    ||||| |||||||||  |||||||||||||||  ||| | |||||||| |||||||||||||||||||||| | || |||||||    
T  46303617 attcttattggttaatgattatggagaaaataggaagaataacaaattaaatgcaatttgcatttaatttttctttagaaaaga 46303534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 8097080 - 8097164
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||| |||||||| |||  |||| ||||||||||||| ||||||||||||||| | |||||||| ||||||| ||||||| |||||    
T  8097080 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcctttggaaaaaataattt-tttgaaacaacat 8097164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 25242239 - 25242292
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  25242239 attatagagaaaataaaaaagagaacaaattgaatgcactttgcgtttaatttt 25242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 38401438 - 38401300
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgaca 126  Q
    |||||| |||||||| |||| ||||  ||||| |||| | |||||||||||||||   ||||||||||| |||| ||||||||||||||||  |||   |    
T  38401438 aattatagagaaaatgaaaaagagagaaaattaaatgtactttgcatttaattttcttttggaaaagattattt-tttgaaaaaacataattaaatatga 38401340  T
Q  127 taaaaattggtctttttt-cttatattttgagacaaagaa 165  Q
    ||||| ||| |||||||| |||||| |||| |||||||||    
T  38401339 taaaagttgatcttttttgcttataatttgggacaaagaa 38401300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 7886665 - 7886766
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    ||||||||||  | |||| |||||||| |||  |||| ||||||||||||| ||||||||| ||||| | ||||||||||| |||| ||| ||| |||||    
T  7886665 tcattggttattagttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttgatttttctttggaaaagatgattt-tttaaaacaacat 7886763  T
Q  117 aat 119  Q
    |||    
T  7886764 aat 7886766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50651099 - 50651152
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||||||||  ||||  |||||||||| ||||||||||||||||||    
T  50651099 ttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 50651152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 49067074 - 49066993
Alignment:
Q  125 cataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||| | |       ||||||||||||||||||| ||||||    
T  49067074 cataaaagttgatcttttttgcttatattttgagacaaagaatatgataattttttgcttatattttaagacggagggagta 49066993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 20847329 - 20847383
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||||| |||  ||| | |||||||||| ||||||||||||||||||    
T  20847329 attatggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaatttta 20847383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 35963214 - 35963161
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  35963214 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 35963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 50730171 - 50730118
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  50730171 ttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaatttta 50730118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50782683 - 50782736
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  50782683 ttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaatttta 50782736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 3972318 - 3972286
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  3972318 gagaacaaattgaatgtaatttgcatttaattt 3972286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 3997560 - 3997592
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  3997560 gagaacaaattgaatgtaatttgcatttaattt 3997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 10227984 - 10227791
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  10227984 attctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttggaaaa 10227885  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  10227884 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagaattttttgcttatattttaggacggagggagta 10227791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 12278778 - 12278622
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  12278778 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacatttgaaaaaatgatttgtttgaaaaa 12278679  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    |||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||    
T  12278678 acataataataacataaaagttgatcttttttgcttatattttgagacaaagaatat 12278622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 17721894 - 17722050
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  17721894 attctcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaatatgatttctttgaaaaa 17721993  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatat 168  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  17721994 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatat 17722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 30766518 - 30766325
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  30766518 attctcattagttaaaaattatggagaaaataaaaaggagaacaaattcaatgcaatttgcatttaattttacattgaaaaaaataatttctttgaaaaa 30766419  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||||||| |||||||| ||| | |||||| |||||||||||||||||||||||| |||       ||||||||||||||||||| ||||||    
T  30766418 acataataataacataaaagttgattttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaagacggagggagta 30766325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 30949207 - 30949014
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  30949207 attctcattggttaaaaattatagagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaa 30949108  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    |||||| |||  ||||||| || ||||||||| ||||||||||||||||||||| ||||||       |||||||||||| |||||| ||||||    
T  30949107 acataaaaatagcataaaagttagtcttttttgcttatattttgagacaaagaaaataagatttttgtgcttatattttaggacggagggagta 30949014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 33756328 - 33756135
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  33756328 attctcattggttaaaaattatggagaaaatgaaaaggaggacaaattgaatgcaatttgcatttaattttacattgaaaaaaatgatttgtttgaaaaa 33756229  T
Q  113 acataataatgacataaaaattggt-cttttttcttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||  |||||||||||||||||||| ||||||||| |||       ||||||||||||  ||||||||||||    
T  33756228 acataataatagcataaaagttggtatttttttcttatattttgagataaagaatatgagatttttttgcttatattttagaacggatggagta 33756135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 374167 - 374017
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacat 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  374167 tcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacatcggaaaatatgatttgtttgaaaaaacat 374068  T
Q  117 aataatgacataaaaattggtctttttt-cttatattttgagacaaagaat 166  Q
    ||||||  ||||||| |||||||||||| |||||||||||||| |||||||    
T  374067 aataatagcataaaagttggtcttttttgcttatattttgagataaagaat 374017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 17598365 - 17598215
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  17598365 attctcattggttaaaaattatggagaaaataaaaaagagaataaattgaatgcaatttgcatttaattttacattggaaaagaagatttgtttgaaaaa 17598266  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaa 162  Q
    |||||||||| ||||| || |||||||||||| ||||||||||| ||||||    
T  17598265 acataataataacatacaagttggtcttttttgcttatattttgggacaaa 17598215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 31887212 - 31887360
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttg-aaaaaacata 117  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31887212 attggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacata 31887311  T
Q  118 ataatgacataaaaattggtctttt-ttcttatattttgagacaaagaa 165  Q
    | |||  ||||||| |||||||||| | |||||| ||||||||||||||    
T  31887312 aaaatagcataaaagttggtcttttatgcttataatttgagacaaagaa 31887360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 3888484 - 3888396
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||||||||||| | ||| |||||||||||| ||||||||||||||||    
T  3888484 attatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaaaaacataat 3888396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 5300696 - 5300831
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat--aatgacata 128  Q
    |||| |||||||||||||  ||| ||||||||||||| |||| ||||||||||   |||||||||||||||| ||||||||||||||||  |||   |||    
T  5300696 ttattgagaaaataaaaaaaagagcaaattgaatgcactttgtatttaattttcttttggaaaagataattt-tttgaaaaaacataattaaatatgata 5300794  T
Q  129 aaaattggtcttttttcttatattttgagacaaagaa 165  Q
    ||| ||| ||||||| |||||| |||| |||||||||    
T  5300795 aaagttgatctttttgcttataatttgggacaaagaa 5300831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 32882806 - 32882880
Alignment:
Q  41 aataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaaca 115  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| | || ||||||| ||||    
T  32882806 aatagaaaggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgacttttttgaaataaca 32882880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 4032044 - 4031956
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | || ||||||||||||| || |||||||||||||    
T  4032044 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttccctttgaaaagataattt-ttcgaaaaaacataat 4031956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 16524436 - 16524349
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||   |||||||| ||||||| ||||||||||||||||    
T  16524436 attatagagaaaatgaaaag-agaacaaattgaatgcactttgcatttaattttcttttggaaaaaataattt-tttgaaaaaacataat 16524349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 13208473 - 13208525
Alignment:
Q  208 acgaatgaccattaatgcaaacccaaatacagcctcaaaatcaacccaaaaaa 260  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  13208473 acgaaggaccattaatgcaaacccacatacagcctcaaaatcaacccaaaaaa 13208525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 4988000 - 4987914
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacata 117  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| |||||||||||| ||| ||||||||||    
T  4988000 attatagagaaaatgaaaatgagagcaaattgaatgcattttgcatttaattttcctttgaaaaagataattt-tttaaaaaaacata 4987914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 21964009 - 21963957
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttac 85  Q
    |||||||||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  21964009 atggagaaaataaaaaagagaacaaattgtatgaaatttacatttaattttac 21963957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 16655245 - 16655172
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaa 111  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||  ||||| |||| || |||| ||||||||    
T  16655245 agaaaatgaaagggagagcaaaatgaatgcaatttgcatttaatttctcattgaaaaatatgattt-tttgaaaa 16655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 15830727 - 15830664
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||||||||||| ||| |||||||| || | |||||||| ||||||| ||||||||||| ||||    
T  15830727 caaattgaatgcactttacatttaatattcctttggaaaaaataattt-tttgaaaaaacgtaat 15830664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 4702 - 4510
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||    
T  4702 attctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttatattgg-aaagatgatttgtttggaaaa 4604  T
Q  113 acataataatgacataaaaattggtctttttt-cttatattttgagacaaagaatataagannnnnnngcttatattttaagacggatggagta 205  Q
    ||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||       |||||||||||| |||||| ||||||    
T  4603 acataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgagaattttttgcttatattttaggacggagggagta 4510  T

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Target: scaffold0330 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 3227 - 3139
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| || ||||||||||||||| ||||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  3227 attatagagaaaatgaaaaagaaaacaaattgaatgcactttgcatataattttgctttggaaaagataattt-tttgaaaaaacataat 3139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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