View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0304_low_18 (Length: 260)

Name: NF0304_low_18
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0304_low_18
NF0304_low_18
[»] chr7 (23 HSPs)
chr7 (18-83)||(3961979-3962044)
chr7 (18-85)||(15329271-15329338)
chr7 (18-83)||(48880927-48880992)
chr7 (18-86)||(45637709-45637777)
chr7 (20-83)||(24394972-24395035)
chr7 (18-89)||(37477080-37477151)
chr7 (18-84)||(15577850-15577916)
chr7 (18-83)||(4974735-4974800)
chr7 (18-83)||(34482835-34482900)
chr7 (18-83)||(42611811-42611876)
chr7 (18-83)||(25167850-25167915)
chr7 (18-84)||(18036977-18037043)
chr7 (18-84)||(35444557-35444623)
chr7 (18-83)||(20010098-20010162)
chr7 (19-80)||(36790467-36790528)
chr7 (18-79)||(29737143-29737204)
chr7 (18-83)||(15238382-15238447)
chr7 (18-86)||(42696080-42696148)
chr7 (18-55)||(30848597-30848634)
chr7 (18-79)||(15238590-15238650)
chr7 (18-79)||(25167655-25167715)
chr7 (18-71)||(29737350-29737403)
chr7 (18-79)||(48880726-48880786)
[»] chr6 (23 HSPs)
chr6 (18-87)||(6127271-6127340)
chr6 (18-83)||(17705465-17705530)
chr6 (18-85)||(23291084-23291151)
chr6 (18-84)||(33695327-33695393)
chr6 (18-84)||(33696695-33696761)
chr6 (18-83)||(6031741-6031806)
chr6 (18-83)||(17176021-17176086)
chr6 (18-85)||(18365573-18365640)
chr6 (18-85)||(18370837-18370904)
chr6 (18-85)||(28675146-28675213)
chr6 (19-84)||(18889698-18889762)
chr6 (18-83)||(25986930-25986995)
chr6 (18-80)||(8515725-8515787)
chr6 (18-86)||(2309423-2309491)
chr6 (19-79)||(29693652-29693712)
chr6 (18-77)||(11548588-11548647)
chr6 (18-72)||(32702216-32702270)
chr6 (18-79)||(34238886-34238946)
chr6 (19-79)||(32702412-32702471)
chr6 (18-85)||(9752245-9752311)
chr6 (18-79)||(17705268-17705328)
chr6 (18-79)||(28675354-28675414)
chr6 (18-79)||(33696903-33696963)
[»] chr3 (38 HSPs)
chr3 (18-86)||(3574527-3574595)
chr3 (18-85)||(2754715-2754782)
chr3 (19-85)||(11347266-11347332)
chr3 (18-83)||(6041884-6041949)
chr3 (18-83)||(37217053-37217118)
chr3 (18-85)||(37522051-37522118)
chr3 (18-84)||(42297352-42297419)
chr3 (18-83)||(3456064-3456129)
chr3 (18-83)||(48160905-48160970)
chr3 (18-83)||(19650900-19650965)
chr3 (18-87)||(33113789-33113858)
chr3 (18-85)||(3137414-3137481)
chr3 (18-84)||(22426344-22426410)
chr3 (18-83)||(8320584-8320649)
chr3 (18-83)||(30385011-30385076)
chr3 (18-83)||(33145713-33145777)
chr3 (18-85)||(33839529-33839596)
chr3 (18-85)||(34482910-34482977)
chr3 (18-84)||(36865027-36865093)
chr3 (22-72)||(42921154-42921204)
chr3 (18-82)||(9797029-9797093)
chr3 (45-87)||(24343543-24343585)
chr3 (18-79)||(40328037-40328098)
chr3 (18-74)||(33839741-33839797)
chr3 (46-80)||(40327878-40327912)
chr3 (29-83)||(41224233-41224287)
chr3 (52-86)||(47402630-47402664)
chr3 (18-83)||(8362045-8362110)
chr3 (18-79)||(36864831-36864892)
chr3 (18-79)||(37522259-37522319)
chr3 (20-84)||(26612784-26612848)
chr3 (19-71)||(47738117-47738169)
chr3 (29-79)||(42921342-42921392)
chr3 (18-79)||(3137213-3137273)
chr3 (18-79)||(8361838-8361898)
chr3 (18-79)||(33145918-33145978)
chr3 (18-79)||(34482687-34482747)
chr3 (18-71)||(47738317-47738370)
[»] chr5 (28 HSPs)
chr5 (18-85)||(2477634-2477701)
chr5 (18-83)||(11361131-11361196)
chr5 (18-85)||(4892200-4892267)
chr5 (18-83)||(25398238-25398303)
chr5 (18-83)||(33584329-33584394)
chr5 (18-86)||(6043511-6043579)
chr5 (18-83)||(37321793-37321859)
chr5 (20-84)||(3362777-3362841)
chr5 (18-86)||(14138665-14138733)
chr5 (20-84)||(38899728-38899792)
chr5 (18-85)||(8145373-8145440)
chr5 (18-83)||(22913054-22913119)
chr5 (20-83)||(12850801-12850864)
chr5 (18-83)||(3522006-3522071)
chr5 (18-83)||(4434007-4434072)
chr5 (18-83)||(12614733-12614798)
chr5 (18-83)||(17545685-17545750)
chr5 (20-79)||(3362987-3363045)
chr5 (29-79)||(27481830-27481880)
chr5 (18-79)||(3521806-3521866)
chr5 (18-79)||(6043311-6043371)
chr5 (18-71)||(10458409-10458462)
chr5 (46-84)||(13664641-13664679)
chr5 (57-87)||(31640964-31640994)
chr5 (18-79)||(4892408-4892468)
chr5 (18-79)||(12614536-12614597)
chr5 (18-79)||(17545481-17545541)
chr5 (18-79)||(33584128-33584188)
[»] chr2 (25 HSPs)
chr2 (18-84)||(35160756-35160822)
chr2 (18-82)||(10661888-10661952)
chr2 (18-86)||(23268062-23268130)
chr2 (18-97)||(7475508-7475587)
chr2 (18-85)||(9293576-9293643)
chr2 (18-83)||(21936081-21936146)
chr2 (18-83)||(33380207-33380272)
chr2 (19-85)||(13354844-13354910)
chr2 (18-83)||(9723405-9723470)
chr2 (18-86)||(43330909-43330977)
chr2 (18-85)||(31174834-31174901)
chr2 (18-84)||(14941366-14941432)
chr2 (18-81)||(21393688-21393751)
chr2 (18-85)||(27847630-27847697)
chr2 (18-71)||(9723612-9723665)
chr2 (18-79)||(22592918-22592979)
chr2 (18-55)||(3989104-3989141)
chr2 (18-79)||(10662094-10662154)
chr2 (18-79)||(23267861-23267921)
chr2 (46-80)||(40262714-40262748)
chr2 (18-79)||(9293374-9293434)
chr2 (18-79)||(21393485-21393544)
chr2 (18-71)||(22591494-22591547)
chr2 (18-79)||(33380413-33380473)
chr2 (18-79)||(35160965-35161025)
[»] scaffold0178 (2 HSPs)
scaffold0178 (18-83)||(11621-11686)
scaffold0178 (18-71)||(11827-11879)
[»] chr8 (44 HSPs)
chr8 (18-83)||(32393858-32393923)
chr8 (18-86)||(26042116-26042184)
chr8 (18-85)||(1645965-1646032)
chr8 (18-85)||(32064743-32064810)
chr8 (18-83)||(34665382-34665447)
chr8 (18-83)||(35353041-35353106)
chr8 (18-87)||(37986055-37986124)
chr8 (18-82)||(14128865-14128929)
chr8 (19-87)||(15187556-15187624)
chr8 (18-86)||(42755042-42755110)
chr8 (18-85)||(17841850-17841917)
chr8 (18-85)||(40780129-40780196)
chr8 (18-83)||(20091801-20091866)
chr8 (18-83)||(24211553-24211618)
chr8 (18-85)||(6108233-6108300)
chr8 (18-80)||(8453837-8453899)
chr8 (18-83)||(37132658-37132723)
chr8 (18-75)||(38016979-38017036)
chr8 (84-145)||(45086719-45086780)
chr8 (18-85)||(31347782-31347849)
chr8 (18-85)||(39772801-39772868)
chr8 (18-84)||(41819778-41819844)
chr8 (18-87)||(7017865-7017934)
chr8 (18-82)||(27782117-27782181)
chr8 (18-83)||(30835047-30835111)
chr8 (18-79)||(32064952-32065012)
chr8 (18-78)||(25581239-25581299)
chr8 (18-73)||(7021988-7022043)
chr8 (26-85)||(24844866-24844925)
chr8 (20-71)||(30834862-30834913)
chr8 (29-83)||(27835464-27835518)
chr8 (18-79)||(3890413-3890474)
chr8 (18-79)||(6108032-6108092)
chr8 (18-79)||(37132479-37132540)
chr8 (29-79)||(42754841-42754890)
chr8 (107-145)||(45086814-45086852)
chr8 (18-79)||(1503642-1503702)
chr8 (18-79)||(3596840-3596900)
chr8 (18-79)||(17841649-17841709)
chr8 (18-79)||(25581038-25581098)
chr8 (18-79)||(26041912-26041972)
chr8 (42-83)||(30055543-30055584)
chr8 (14-79)||(38017135-38017199)
chr8 (18-79)||(40779928-40779988)
[»] chr4 (39 HSPs)
chr4 (18-82)||(7745112-7745176)
chr4 (18-85)||(10442789-10442856)
chr4 (18-84)||(31078819-31078885)
chr4 (18-83)||(22199261-22199326)
chr4 (20-89)||(36072941-36073010)
chr4 (18-83)||(49387888-49387953)
chr4 (18-85)||(21802322-21802389)
chr4 (18-85)||(23964465-23964532)
chr4 (18-85)||(24128237-24128304)
chr4 (18-85)||(47290064-47290131)
chr4 (18-85)||(50156578-50156645)
chr4 (18-84)||(33530688-33530754)
chr4 (18-83)||(2624837-2624902)
chr4 (18-87)||(36073346-36073415)
chr4 (20-84)||(4751445-4751509)
chr4 (18-85)||(24392665-24392732)
chr4 (18-85)||(44893424-44893491)
chr4 (18-84)||(53123029-53123096)
chr4 (18-83)||(46441844-46441909)
chr4 (18-77)||(42671675-42671734)
chr4 (29-84)||(37934952-37935007)
chr4 (18-84)||(44893213-44893280)
chr4 (18-71)||(37219837-37219890)
chr4 (19-79)||(17655637-17655697)
chr4 (19-79)||(24128446-24128505)
chr4 (18-70)||(36073743-36073795)
chr4 (18-79)||(11314050-11314111)
chr4 (18-79)||(25063373-25063434)
chr4 (18-71)||(42671874-42671927)
chr4 (18-79)||(44893012-44893072)
chr4 (18-79)||(44893632-44893692)
chr4 (18-55)||(9088898-9088935)
chr4 (18-79)||(9089076-9089136)
chr4 (18-79)||(21802119-21802179)
chr4 (18-79)||(36073555-36073615)
chr4 (18-79)||(46442050-46442110)
chr4 (18-71)||(50156386-50156438)
chr4 (18-79)||(53123237-53123297)
chr4 (57-85)||(30563222-30563250)
[»] scaffold0204 (2 HSPs)
scaffold0204 (18-85)||(4394-4461)
scaffold0204 (18-79)||(4602-4662)
[»] chr1 (28 HSPs)
chr1 (18-85)||(18404440-18404507)
chr1 (18-85)||(25463674-25463741)
chr1 (18-83)||(40214988-40215053)
chr1 (18-85)||(3559615-3559682)
chr1 (18-85)||(16045798-16045865)
chr1 (18-84)||(41876442-41876508)
chr1 (18-83)||(9910293-9910358)
chr1 (18-87)||(19015400-19015469)
chr1 (18-83)||(44094698-44094763)
chr1 (20-83)||(32000269-32000332)
chr1 (18-83)||(36966708-36966773)
chr1 (18-83)||(37821834-37821899)
chr1 (18-85)||(27523255-27523324)
chr1 (18-83)||(6883487-6883552)
chr1 (18-86)||(25973411-25973478)
chr1 (18-85)||(40273700-40273767)
chr1 (46-84)||(34519757-34519795)
chr1 (46-84)||(51620979-51621017)
chr1 (21-79)||(52064376-52064434)
chr1 (18-79)||(25973613-25973673)
chr1 (18-79)||(37821633-37821693)
chr1 (18-79)||(18404654-18404714)
chr1 (18-79)||(19015610-19015670)
chr1 (18-71)||(44690828-44690881)
chr1 (18-79)||(51737711-51737771)
chr1 (46-83)||(52329319-52329356)
chr1 (56-84)||(9389275-9389303)
chr1 (19-83)||(44691030-44691094)
[»] scaffold0665 (1 HSPs)
scaffold0665 (18-82)||(3069-3133)
[»] scaffold0471 (2 HSPs)
scaffold0471 (18-85)||(12840-12907)
scaffold0471 (19-79)||(13049-13108)
[»] scaffold0096 (1 HSPs)
scaffold0096 (18-85)||(41009-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (18-89)||(47844-47915)
[»] scaffold0228 (5 HSPs)
scaffold0228 (18-72)||(8413-8467)
scaffold0228 (18-72)||(15995-16049)
scaffold0228 (18-72)||(25947-26001)
scaffold0228 (18-79)||(16190-16250)
scaffold0228 (18-79)||(26142-26202)


Alignment Details
Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3962044 - 3961979
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 15329338 - 15329271
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 48880927 - 48880992
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 45637777 - 45637709
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctta 45637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 24395035 - 24394972
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 37477080 - 37477151
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaaga 89  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  37477080 gattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctcttaaga 37477151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 15577850 - 15577916
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 4974735 - 4974800
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 34482900 - 34482835
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34482900 gattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattgctc 34482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 42611876 - 42611811
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 25167850 - 25167915
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  25167850 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctc 25167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 18037043 - 18036977
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  18037043 gattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctct 18036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 35444623 - 35444557
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctct 35444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 20010098 - 20010162
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  20010098 gattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 36790467 - 36790528
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 80  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattg 36790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 29737204 - 29737143
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||||||  ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  29737204 gattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 15238447 - 15238382
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| || ||||||||| ||| | |||||||||||||||||||||||    
T  15238447 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 15238382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 42696148 - 42696080
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    ||||||||||  |||||||||||||||  || || |||||||||||||||||||||| |||||||||||    
T  42696148 gattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctctta 42696080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30848634 - 30848597
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgata 55  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30848634 gattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 15238590 - 15238650
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||||||  ||| ||||| ||||| |||||||||| |||||||    
T  15238590 gattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcatt 15238650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 25167715 - 25167655
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25167715 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 29737350 - 29737403
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||| || ||||| |||||||||  ||||||||||||||| ||||||||||    
T  29737350 gattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 48880786 - 48880726
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  48880786 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 48880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 6127340 - 6127271
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 6127271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 17705465 - 17705530
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23291084 - 23291151
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 23291151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 33695327 - 33695393
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 33696761 - 33696695
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 6031741 - 6031806
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 17176021 - 17176086
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 18365573 - 18365640
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 18365640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 18370837 - 18370904
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 18370904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 28675213 - 28675146
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28675213 gattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 28675146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 18889698 - 18889762
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctct 18889762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 25986995 - 25986930
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  25986995 gattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 8515725 - 8515787
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 80  Q
    |||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  8515725 gattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 2309423 - 2309491
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| |||| |||||||||||   | ||||||||||||||||||||||||| |||||||||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctctta 2309491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 29693652 - 29693712
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatt 29693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 11548588 - 11548647
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagca 77  Q
    |||||||||| |||||||||||| || ||||||||| ||||| |||||||||||||||||    
T  11548588 gattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 32702270 - 32702216
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 72  Q
    |||||||||| ||| |||||||| |||||||| ||| ||||||||||||||||||    
T  32702270 gattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 34238946 - 34238886
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| || | |||||||||||||| |||||||||| |||||||    
T  34238946 gattattgtgtcatgtcattcttgaa-tcttcttgataaaatcattcttgatatctagcatt 34238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 32702412 - 32702471
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32702412 attattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 32702471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 9752245 - 9752311
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| ||| |||||||| || |||||||||| || | |||||||||||||| ||||||||||    
T  9752245 gattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctctt 9752311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 17705328 - 17705268
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  17705328 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 17705268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 28675354 - 28675414
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  28675354 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 28675414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33696903 - 33696963
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33696903 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 33696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 3574527 - 3574595
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 3574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 2754782 - 2754715
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2754715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 11347332 - 11347266
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 11347266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 6041949 - 6041884
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37217053 - 37217118
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 37522118 - 37522051
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctctt 37522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 42297419 - 42297352
Alignment:
Q  18 gattattct-gtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42297419 gattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 42297352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3456129 - 3456064
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 48160970 - 48160905
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 48160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19650900 - 19650965
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 33113858 - 33113789
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttaa 33113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 3137414 - 3137481
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 3137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 22426344 - 22426410
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  22426344 gattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctct 22426410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8320584 - 8320649
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8320584 gattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctc 8320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 30385076 - 30385011
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33145777 - 33145713
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  33145777 gattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattgctc 33145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 33839596 - 33839529
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||| ||||||||||    
T  33839596 gattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctctt 33839529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 34482910 - 34482977
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||  ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 34482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 36865027 - 36865093
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||  ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  36865027 gattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctct 36865093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 42921204 - 42921154
Alignment:
Q  22 attctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 72  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42921204 attcggtcatgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 9797029 - 9797093
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 82  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||| |||||||    
T  9797029 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 24343585 - 24343543
Alignment:
Q  45 ttttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24343585 ttttcttgataaaatctttcttaatatatagcattgctcttaa 24343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 40328037 - 40328098
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  40328037 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 40328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 33839741 - 33839797
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatata 74  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||||    
T  33839741 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  46 tttcttgataaaatctttcttgatatatagcattg 80  Q
    |||||||||||||||||||||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 41224287 - 41224233
Alignment:
Q  29 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||||| || ||||||||| |||||||||||| |||||||||| |||||    
T  41224287 catgtcattcttgaatttttcttgagaaaatctttcttaatatatagcagtgctc 41224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 47402630 - 47402664
Alignment:
Q  52 gataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||||||||||||||||||||||||||||    
T  47402630 gataaaatctttcttgatatatagcattgctctta 47402664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8362045 - 8362110
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| || ||||||||| |   | |||||||||||||||||||||||    
T  8362045 gattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctc 8362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 36864892 - 36864831
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  ||| ||||||||||| |||||||||| |||||||    
T  36864892 gattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcatt 36864831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 37522259 - 37522319
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  37522259 gattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 37522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 26612848 - 26612784
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||| |||||||||||| || |||| || ||||||||||| ||||||||||  ||||||||    
T  26612848 ttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataatattgctct 26612784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 47738169 - 47738117
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||||| ||| |||||||| ||  ||||||||||||||||||||||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 42921342 - 42921392
Alignment:
Q  29 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||||||||||||  ||||||||||||||| ||||| |||| |||||||    
T  42921342 catgtcattcttaaatatttcttgataaaatcattcttaatatctagcatt 42921392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3137273 - 3137213
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 3137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 8361898 - 8361838
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  8361898 gattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 8361838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33145918 - 33145978
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  33145918 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33145978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 34482747 - 34482687
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  34482747 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 34482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 47738317 - 47738370
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||| || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  47738317 gattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 2477701 - 2477634
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2477634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 11361131 - 11361196
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4892267 - 4892200
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 25398303 - 25398238
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 33584329 - 33584394
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33584394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 6043511 - 6043579
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctta 6043579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37321793 - 37321859
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttctt-gatatatagcattgctc 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 3362841 - 3362777
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 3362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 14138733 - 14138665
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctctta 14138665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 38899728 - 38899792
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 38899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 8145440 - 8145373
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattcctctt 8145373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 22913054 - 22913119
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  22913054 gattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctc 22913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 12850864 - 12850801
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 3522006 - 3522071
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||||||||||||| ||||||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 4434007 - 4434072
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  4434007 gattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 4434072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 12614733 - 12614798
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||| ||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||    
T  12614733 gattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 17545685 - 17545750
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| || ||||||||| ||| | |||||||||||||||||||||||    
T  17545685 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 17545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 3362987 - 3363045
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3362987 ttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 27481880 - 27481830
Alignment:
Q  29 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||||||||| || |||||||||||||||||||||| ||| ||||||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3521866 - 3521806
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3521866 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 6043371 - 6043311
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043371 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 6043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 10458462 - 10458409
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||| || |||||||||||| || ||||||||||||||| |||||||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 13664679 - 13664641
Alignment:
Q  46 tttcttgataaaatctttcttgatatatagcattgctct 84  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  13664679 tttcttgataaaatctttcttaatatataacattgctct 13664641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 31640964 - 31640994
Alignment:
Q  57 aatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||||||||||||||||||||||||    
T  31640964 aatctttcttgatatatagcattgctcttaa 31640994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 4892408 - 4892468
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  4892408 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 4892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 12614597 - 12614536
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||||||  ||| ||||||||||| | |||||||| |||||||    
T  12614597 gattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatt 12614536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 17545541 - 17545481
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||||||  ||| ||||| ||||| |||||||||| |||||||    
T  17545541 gattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcatt 17545481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 33584188 - 33584128
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  33584188 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 35160822 - 35160756
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 35160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10661952 - 10661888
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 82  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 23268062 - 23268130
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctta 23268130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 7475508 - 7475587
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaagagatatata 97  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || | |||||||    
T  7475508 gattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctaaataaatatata 7475587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 9293576 - 9293643
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctctt 9293643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 21936146 - 21936081
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33380272 - 33380207
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 13354910 - 13354844
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctctt 13354844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 9723470 - 9723405
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctc 9723405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 43330977 - 43330909
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| |||||||||||| || |||| |||| ||||||||||||||||||||||||||||||||    
T  43330977 gattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctctta 43330909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 31174834 - 31174901
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  31174834 gattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattgttctt 31174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 14941366 - 14941432
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctct 14941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 21393688 - 21393751
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgc 81  Q
    |||||||||  ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  21393688 gattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgc 21393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 27847697 - 27847630
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||||| ||||| ||||||||||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctctt 27847630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 9723612 - 9723665
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  9723612 gattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 22592918 - 22592979
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  22592918 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3989141 - 3989104
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgata 55  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3989141 gattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 10662094 - 10662154
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  10662094 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 10662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 23267921 - 23267861
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  23267921 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 23267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 40262714 - 40262748
Alignment:
Q  46 tttcttgataaaatctttcttgatatatagcattg 80  Q
    ||||||||||||||||||||||||||||| |||||    
T  40262714 tttcttgataaaatctttcttgatatataacattg 40262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 9293434 - 9293374
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  9293434 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 9293374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 21393544 - 21393485
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| |||||||||||||||  |||||||||||| ||||| |||||||||| |||||||    
T  21393544 gattattgtgtcatgtcattctt-gaattttcttgat-aaatcattcttgatatctagcatt 21393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    |||||||||| ||| |||||||| || |||| || |||||||||||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33380413 - 33380473
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  33380413 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33380473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 35160965 - 35161025
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  35160965 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 11686 - 11621
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 11827 - 11879
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  11827 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 11879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32393923 - 32393858
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 26042116 - 26042184
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctctta 26042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 1645965 - 1646032
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 1646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 32064810 - 32064743
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 32064743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 34665447 - 34665382
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 35353106 - 35353041
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 37986055 - 37986124
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattactcttaa 37986124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14128929 - 14128865
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 82  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 15187624 - 15187556
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcttaa 15187556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 42755042 - 42755110
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctctta 42755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 17841850 - 17841917
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 17841917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 40780129 - 40780196
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 40780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 20091801 - 20091866
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 24211553 - 24211618
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 6108233 - 6108300
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  6108233 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctctt 6108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 8453899 - 8453837
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 80  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  8453899 gattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37132658 - 37132723
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  37132658 gattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctc 37132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 38017036 - 38016979
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatag 75  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 45086719 - 45086780
Alignment:
Q  84 ttaagagatatatactactaatgttttttaaggaaatataccacgacttatgtttgcacatc 145  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||    
T  45086719 ttaagagatatatactactaattttttttaaggaaatatactactacttatgtttgcacatc 45086780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 31347782 - 31347849
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||    
T  31347782 gattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctctt 31347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 39772801 - 39772868
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||| ||||||||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctctt 39772868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 41819778 - 41819844
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctct 41819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 7017865 - 7017934
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||| |||||||||||| || ||||||| | |||||||||| ||||||||||||||||||||||    
T  7017865 gattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctcttaa 7017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 27782117 - 27782181
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 82  Q
    |||||||||| ||||||||| || ||  |||||||||||||| ||||||||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 30835047 - 30835111
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| || |||| | ||||||||||||||||||||||| ||||||||    
T  30835047 gattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatatataacattgctc 30835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 32064952 - 32065012
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064952 gattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 32065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 25581239 - 25581299
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 78  Q
    ||||||| || |||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  25581239 gattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 7022043 - 7021988
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatat 73  Q
    |||||||||| ||| |||||||| || ||||||||| |||||||||||||||||||    
T  7022043 gattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 24844866 - 24844925
Alignment:
Q  26 tgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||||||||||| || ||||||| ||||||| ||||||||||| ||||||| |||||    
T  24844866 tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatttctctt 24844925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 30834913 - 30834862
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  30834913 ttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatat 30834862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 27835464 - 27835518
Alignment:
Q  29 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||||| || ||||||| |||| |||||| |||||||||||||||||||    
T  27835464 catgtcattcttgaatttttcttaataagatctttattgatatatagcattgctc 27835518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3890474 - 3890413
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||||||| ||| |||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  3890474 gattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcatt 3890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 6108092 - 6108032
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6108092 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 37132540 - 37132479
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||| | ||  ||||||||||||||| |||||||||| |||||||    
T  37132540 gattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatt 37132479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 42754890 - 42754841
Alignment:
Q  29 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42754890 catgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 42754841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 45086814 - 45086852
Alignment:
Q  107 ttttttaaggaaatataccacgacttatgtttgcacatc 145  Q
    |||||||||||||||||| || |||||||||||||||||    
T  45086814 ttttttaaggaaatatactactacttatgtttgcacatc 45086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 1503702 - 1503642
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  1503702 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 1503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3596900 - 3596840
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3596900 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3596840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 17841709 - 17841649
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  17841709 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 17841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 25581098 - 25581038
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25581098 gattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 26041972 - 26041912
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  26041972 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 30055584 - 30055543
Alignment:
Q  42 aaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||| ||||||||||||| |||| |||||||||||||||    
T  30055584 aaatttttttgataaaatcttccttggtatatagcattgctc 30055543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 38017135 - 38017199
Alignment:
Q  14 ggtagattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||| |||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  38017135 ggtaaattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 38017199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 40779988 - 40779928
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  40779988 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 40779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 7745112 - 7745176
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 82  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 10442789 - 10442856
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 10442856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 31078819 - 31078885
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 31078885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 22199326 - 22199261
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 22199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 36073010 - 36072941
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaaga 89  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcgtaaga 36072941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 49387888 - 49387953
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 21802322 - 21802389
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctctt 21802389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23964465 - 23964532
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctctt 23964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 24128304 - 24128237
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 24128237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 47290131 - 47290064
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 47290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 50156578 - 50156645
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctctt 50156645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 33530688 - 33530754
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctct 33530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 2624902 - 2624837
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 2624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 36073415 - 36073346
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattcctcttaa 36073346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 4751509 - 4751445
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 4751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 24392732 - 24392665
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  24392732 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctctt 24392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 44893491 - 44893424
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctctt 44893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 53123096 - 53123029
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttctt-gataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  53123096 gattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctct 53123029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 46441909 - 46441844
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||| || |||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  46441909 gattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 46441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 42671734 - 42671675
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagca 77  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  42671734 gattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 37934952 - 37935007
Alignment:
Q  29 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||    
T  37934952 catgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctct 37935007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 44893213 - 44893280
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttctt-gataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||| ||||||| || || |||||||||||| |||||||||||||||||    
T  44893213 gattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctct 44893280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 37219837 - 37219890
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||||||||    
T  37219837 gattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 17655637 - 17655697
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||| ||||| |||| |||||||    
T  17655637 attattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatt 17655697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 24128446 - 24128505
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  24128446 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 24128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 36073743 - 36073795
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgata 70  Q
    ||||||| ||||||||||||||||||  |||||| ||||||||||||||||||    
T  36073743 gattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 11314111 - 11314050
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| |||||||||||||||  |  ||||||||||||||| |||||||||| |||||||    
T  11314111 gattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcatt 11314050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 25063434 - 25063373
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||||||  |||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  25063434 gattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 42671874 - 42671927
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  42671874 gattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 42671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 44893072 - 44893012
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  44893072 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 44893632 - 44893692
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  44893632 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 9088935 - 9088898
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgata 55  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  9088935 gattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 9089076 - 9089136
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  9089076 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 9089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 21802179 - 21802119
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  21802179 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 21802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 36073555 - 36073615
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  36073555 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 36073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 46442050 - 46442110
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  46442050 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 46442110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 50156438 - 50156386
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  50156438 gattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 50156386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 53123237 - 53123297
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  53123237 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 53123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 85
Target Start/End: Complemental strand, 30563250 - 30563222
Alignment:
Q  57 aatctttcttgatatatagcattgctctt 85  Q
    |||||||||||||||||||||||||||||    
T  30563250 aatctttcttgatatatagcattgctctt 30563222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4461 - 4394
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 4602 - 4662
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4602 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 18404507 - 18404440
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 18404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 25463741 - 25463674
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctctt 25463674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 40215053 - 40214988
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 3559682 - 3559615
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattgttctt 3559615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 16045798 - 16045865
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattactctt 16045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 41876442 - 41876508
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctct 41876508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 9910293 - 9910358
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 19015469 - 19015400
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaa 87  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttaa 19015400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 44094763 - 44094698
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 32000269 - 32000332
Alignment:
Q  20 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 32000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 36966708 - 36966773
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 36966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37821834 - 37821899
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 27523255 - 27523324
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttga--tatatagcattgctctt 85  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||  |||||||||||||||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctctt 27523324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 6883552 - 6883487
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||| ||||||||||||||||    
T  6883552 gattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctc 6883487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 25973478 - 25973411
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 86  Q
    |||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctctta 25973411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 40273767 - 40273700
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    ||||||| || |||||||||||| || ||||||||| ||||||||||||||||| |||||||||||||    
T  40273767 gattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctctt 40273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 34519795 - 34519757
Alignment:
Q  46 tttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34519795 tttcttaataaaatctttcttgatatatagcattgctct 34519757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 51621017 - 51620979
Alignment:
Q  46 tttcttgataaaatctttcttgatatatagcattgctct 84  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctct 51620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 52064434 - 52064376
Alignment:
Q  21 tattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||||||||||||||||| ||  ||||||||||||||| || ||||||| |||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcatt 52064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 25973613 - 25973673
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25973613 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 37821693 - 37821633
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37821693 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 37821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 18404654 - 18404714
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  18404654 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 18404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 19015610 - 19015670
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  19015610 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatt 19015670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 44690881 - 44690828
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 71  Q
    |||||||||| |||||||||||| ||  ||||||||||||||| || |||||||    
T  44690881 gattattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 51737711 - 51737771
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  51737711 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 51737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 52329356 - 52329319
Alignment:
Q  46 tttcttgataaaatctttcttgatatatagcattgctc 83  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  52329356 tttcttgataaattctttcttgatatataacattgctc 52329319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 9389275 - 9389303
Alignment:
Q  56 aaatctttcttgatatatagcattgctct 84  Q
    |||||||||||||||||||||||||||||    
T  9389275 aaatctttcttgatatatagcattgctct 9389303  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 44691030 - 44691094
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 83  Q
    ||||||||| ||||| |||||| ||  ||| || |||||||||||||||||||| | ||||||||    
T  44691030 attattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctc 44691094  T

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Target: scaffold0665 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3133 - 3069
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 82  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 3069  T

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Target: scaffold0471 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 12907 - 12840
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 12840  T

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Target: scaffold0471; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 13049 - 13108
Alignment:
Q  19 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    |||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  13049 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 13108  T

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Target: scaffold0096 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 41076 - 41009
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 85  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 41009  T

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Target: scaffold0085 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 47915 - 47844
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttaaga 89  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctcgtaaga 47844  T

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Target: scaffold0228 (Bit Score: 47; Significance: 6e-18; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 72  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 72  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

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Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 72  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

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Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 16190 - 16250
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  16190 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 16250  T

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Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 26142 - 26202
Alignment:
Q  18 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 79  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  26142 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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