View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0304_low_20 (Length: 225)
Name: NF0304_low_20
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0304_low_20 |
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[»] scaffold0023 (1 HSPs) |
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[»] scaffold0348 (1 HSPs) |
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[»] scaffold0053 (1 HSPs) |
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[»] scaffold1318 (1 HSPs) |
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[»] scaffold0072 (1 HSPs) |
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[»] scaffold0131 (1 HSPs) |
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[»] scaffold0384 (1 HSPs) |
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[»] scaffold1469 (1 HSPs) |
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[»] scaffold0609 (1 HSPs) |
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[»] scaffold0127 (1 HSPs) |
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[»] scaffold0029 (3 HSPs) |
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[»] scaffold0001 (1 HSPs) |
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[»] scaffold0261 (1 HSPs) |
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[»] scaffold1461 (1 HSPs) |
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[»] scaffold0249 (1 HSPs) |
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[»] scaffold0453 (1 HSPs) |
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[»] scaffold0222 (1 HSPs) |
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[»] scaffold0183 (1 HSPs) |
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[»] scaffold0034 (1 HSPs) |
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[»] scaffold0720 (1 HSPs) |
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[»] scaffold0553 (2 HSPs) |
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[»] scaffold0544 (1 HSPs) |
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[»] scaffold0146 (1 HSPs) |
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[»] scaffold0026 (2 HSPs) |
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[»] scaffold0099 (1 HSPs) |
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[»] scaffold0461 (1 HSPs) |
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[»] scaffold0004 (1 HSPs) |
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[»] scaffold2054 (1 HSPs) |
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[»] scaffold0483 (1 HSPs) |
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[»] scaffold0317 (1 HSPs) |
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[»] scaffold0107 (1 HSPs) |
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[»] scaffold0020 (1 HSPs) |
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[»] scaffold0019 (1 HSPs) |
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[»] scaffold0924 (1 HSPs) |
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[»] scaffold0247 (1 HSPs) |
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[»] scaffold0154 (1 HSPs) |
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[»] scaffold0129 (1 HSPs) |
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[»] scaffold0235 (1 HSPs) |
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[»] scaffold0310 (1 HSPs) |
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[»] scaffold0025 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 9e-94; HSPs: 20)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12033614 - 12033398
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
T |
12033614 |
aatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttcccaattttacctt-aag |
12033516 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
12033515 |
aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacatcaaatc |
12033416 |
T |
|
Q |
200 |
aattcctaggttcatctc |
217 |
Q |
|
|
| |||||| |||| |||| |
|
|
T |
12033415 |
agttcctaagttcttctc |
12033398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 17131617 - 17131834
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag |
99 |
Q |
|
|
||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |
|
|
T |
17131617 |
aatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaag |
17131715 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat |
198 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
17131716 |
aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat |
17131815 |
T |
|
Q |
199 |
caattcctaggttcatctc |
217 |
Q |
|
|
|| |||||| |||| |||| |
|
|
T |
17131816 |
cagttcctaagttcttctc |
17131834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14865731 - 14865948
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
|||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||| || |||||||||||||| ||| |
|
|
T |
14865731 |
aatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattattttcccaattttacctt-aag |
14865829 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaacaaat |
198 |
Q |
|
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
T |
14865830 |
aacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaat |
14865929 |
T |
|
Q |
199 |
caattcctaggttcatctc |
217 |
Q |
|
|
|| |||||| |||| |||| |
|
|
T |
14865930 |
cagttcctaagttcttctc |
14865948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 19235237 - 19235033
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| |||| |||||||||||||| ||| |
|
|
T |
19235237 |
aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttacctt-aag |
19235141 |
T |
|
Q |
100 |
aacagttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaat |
198 |
Q |
|
|
||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |
|
|
T |
19235140 |
aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaaga-taaagtgcagcaaat |
19235042 |
T |
|
Q |
199 |
caattccta |
207 |
Q |
|
|
||||||||| |
|
|
T |
19235041 |
caattccta |
19235033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 13302372 - 13302195
Alignment:
Q |
39 |
attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattat |
138 |
Q |
|
|
||||||| ||| || ||||| || ||||||| |||||| ||||||| |||||| ||| ||||||| | || |||||||||||||||||||| ||||||| |
|
|
T |
13302372 |
attcttacaccattcctttcgaagtcatcatcaaccctaaattccccattttatcttcaagaacaatgcatttgattaattttcagaaattacatattat |
13302273 |
T |
|
Q |
139 |
gactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|| ||||||||||||||| ||||||||||||||||||| | | | |||| |||| ||||||| |||||||||||||||| |
|
|
T |
13302272 |
gattattgaaagataatctcacccttaccttagaattgtaga-aaaaaaacacagcaaatcagttcctaggttcatctc |
13302195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 13313028 - 13312851
Alignment:
Q |
39 |
attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattat |
138 |
Q |
|
|
||||||| ||| || ||||| || ||||||| |||||| ||||||| |||||| ||| ||||||| | || |||||||||||||| ||||| ||||||| |
|
|
T |
13313028 |
attcttacaccattcctttcgaagtcatcatcaaccctaaattccctattttatcttcaagaacaatccatttgattaattttcaaaaattacatattat |
13312929 |
T |
|
Q |
139 |
gactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|| ||||||||||||||| ||||||||||||||||||| | | | |||| |||| ||||||| |||||||||||||||| |
|
|
T |
13312928 |
gattattgaaagataatctcacccttaccttagaattgtaga-aaaaaaacacagcaaatcagttcctaggttcatctc |
13312851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 13323920 - 13323782
Alignment:
Q |
39 |
attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatatta |
137 |
Q |
|
|
||||||| ||| || ||||| || ||||||| |||||| |||||||||||||| ||| ||||||| | |||| |||||||||||||||||| |||||| |
|
|
T |
13323920 |
attcttacaccattcctttcgaagtcatcatcaaccctaaattcccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatatta |
13323821 |
T |
|
Q |
138 |
tgactattgaaagataatcccacccttaccttagaattg |
176 |
Q |
|
|
||| ||||||||||||||| ||||||||||||||||||| |
|
|
T |
13323820 |
tgattattgaaagataatctcacccttaccttagaattg |
13323782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 51301550 - 51301659
Alignment:
Q |
77 |
taattcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg |
176 |
Q |
|
|
||||||||||||||| | | ||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
T |
51301550 |
taattcccaattttattctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattg |
51301649 |
T |
|
Q |
177 |
caaagacaaa |
186 |
Q |
|
|
| |||||||| |
|
|
T |
51301650 |
cgaagacaaa |
51301659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 10389502 - 10389428
Alignment:
Q |
112 |
gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
||||| |||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10389502 |
gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
10389428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 10414591 - 10414517
Alignment:
Q |
112 |
gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
||||| |||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10414591 |
gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
10414517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 10421261 - 10421187
Alignment:
Q |
112 |
gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
||||| |||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10421261 |
gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
10421187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 23370560 - 23370458
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcat |
214 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||| | |||| ||||||||| |||||| |||||| |||| | |
|
|
T |
23370560 |
aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt |
23370461 |
T |
|
Q |
215 |
ctc |
217 |
Q |
|
|
||| |
|
|
T |
23370460 |
ctc |
23370458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
17240652 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
17240554 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
| ||||| || |||||| ||||| || ||||||||||||| |
|
|
T |
17240553 |
atgtattaagattattgagagatagtctcacccttacctta |
17240513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 24933880 - 24933823
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg |
176 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || ||||||||||||||||||| |
|
|
T |
24933880 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg |
24933823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 18929161 - 18929300
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaa-tcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || ||||||||| ||| ||| |||||| ||| |||||||||| || ||||||| | | || ||| |||||||||||||| |
|
|
T |
18929161 |
aaacatgattcttacaccattcctttcaaaaatcagcatgaaccct-aatccccaattttatctcgaagaacaatatacttagatcaattttcagaaatt |
18929259 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
||||| |||| |||||| ||||| || ||||||||||||| |
|
|
T |
18929260 |
atatatcatgattattgagagatagtctcacccttacctta |
18929300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
9534328 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
9534382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 10555353 - 10555402
Alignment:
Q |
158 |
cacccttaccttagaattgcaaagacaaaagcacaacaaatcaattccta |
207 |
Q |
|
|
||||||||||||||||||| ||| ||||||| || |||||||||| |||| |
|
|
T |
10555353 |
cacccttaccttagaattgtaaacacaaaagtacgacaaatcaatcccta |
10555402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacct |
168 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||| |
|
|
T |
20247843 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacct |
20247791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacct |
168 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||| |
|
|
T |
24192957 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacct |
24193009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
41455149 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
41455097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 20906630 - 20906446
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
20906630 |
aatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacc-ttaaga |
20906532 |
T |
|
Q |
101 |
acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
20906531 |
atagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaaa |
20906446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16090960 - 16091178
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| | | |
|
|
T |
16090960 |
aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttacctt-agg |
16091058 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa |
197 |
Q |
|
|
||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |
|
|
T |
16091059 |
aacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaa |
16091158 |
T |
|
Q |
198 |
tcaattcctaggttcatctc |
217 |
Q |
|
|
||| |||||| |||| |||| |
|
|
T |
16091159 |
tcagttcctaagttcttctc |
16091178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 29181279 - 29181061
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaa-ttttacctttaag |
99 |
Q |
|
|
||||||||||||||| || |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||| ||| |
|
|
T |
29181279 |
aatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttacctt-aag |
29181181 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa |
197 |
Q |
|
|
|| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |
|
|
T |
29181180 |
aatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaa |
29181081 |
T |
|
Q |
198 |
tcaattcctaggttcatctc |
217 |
Q |
|
|
||| |||||| |||| |||| |
|
|
T |
29181080 |
tcagttcctaagttcttctc |
29181061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 80 - 217
Target Start/End: Original strand, 2971219 - 2971356
Alignment:
Q |
80 |
ttcccaattttacctttaagaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa |
179 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2971219 |
ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttaccttagaattgcaa |
2971317 |
T |
|
Q |
180 |
agac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|||| ||||||||| ||||||| |||||| |||| |||| |
|
|
T |
2971318 |
agacaaaaagcacagcaaatcagttcctaagttcttctc |
2971356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2966850 - 2966926
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt |
77 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
2966850 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt |
2966926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 2465248 - 2465427
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| |||||| |||||||||| | ||||||||||| | ||| | |
|
|
T |
2465248 |
aatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataaaa |
2465345 |
T |
|
Q |
101 |
acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga |
182 |
Q |
|
|
|||||| ||||| ||||||||||||||| |||||||| | ||||||| ||| ||||||||||||||||||||||||||||| |
|
|
T |
2465346 |
acagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaaga |
2465427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 3857534 - 3857357
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt---accttta |
97 |
Q |
|
|
||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| |||||| |||||||||| | ||||||||||| ||| | | |
|
|
T |
3857534 |
aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttttaccataa |
3857437 |
T |
|
Q |
98 |
agaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa |
179 |
Q |
|
|
| ||||||| ||||| ||||||||||||||| |||||||| | ||||||| ||| |||||||||||||||||||||||||| |
|
|
T |
3857436 |
a-aacagttaaattgcttaattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgcaa |
3857357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 14319768 - 14319582
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg |
130 |
Q |
|
|
|||| ||||||||| |||||| |||||||||||| | | || |||||| |||||||| ||| |||||| ||| || |||||||||||||||||| |
|
|
T |
14319768 |
aaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttagattaattttcagaaatta |
14319670 |
T |
|
Q |
131 |
tatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| |||| |||| |
|
|
T |
14319669 |
tacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc |
14319582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 14230679 - 14230878
Alignment:
Q |
14 |
atcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-g |
112 |
Q |
|
|
|||||| |||||||| |||| ||||||||| |||||| |||||||||||| | | || |||||| |||||||| ||| |||||| ||| || | |
|
|
T |
14230679 |
atcaaattacaacatattaaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttag |
14230777 |
T |
|
Q |
113 |
attaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggtt |
211 |
Q |
|
|
||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||| |
|
|
T |
14230778 |
attaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagtt |
14230877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 31155396 - 31155464
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
31155396 |
ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
31155464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 13679416 - 13679548
Alignment:
Q |
39 |
attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatatta |
137 |
Q |
|
|
||||||| ||| || |||||||||||| ||| || || |||||| || ||||| | | ||||||| || |||| ||| |||||||| ||||| ||||| | |
|
|
T |
13679416 |
attcttacaccattcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatca |
13679515 |
T |
|
Q |
138 |
tgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
||| ||||||||||| || ||||||||||||| |
|
|
T |
13679516 |
tgatcattgaaagatagtctcacccttacctta |
13679548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| |||||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
11382925 |
aattttcagaaattatatattatgattattgagagatagtctcacccttacctta |
11382871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| |||||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
11389402 |
aattttcagaaattatatattatgattattgagagatagtctcacccttacctta |
11389348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|||||||||||||| |||| ||||| |||||| ||||| || ||||||||||||||| ||||| |
|
|
T |
21231014 |
aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca |
21230952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
14422985 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
14423040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
16009577 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
16009631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
12590695 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
12590643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
13007435 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
13007487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga |
172 |
Q |
|
|
|||||||||||||| || |||||| |||||| ||||| || ||||||||||||||| |
|
|
T |
20311106 |
aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga |
20311050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20851302 - 20851085
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||| |
|
|
T |
20851302 |
aatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aag |
20851204 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat |
198 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
20851203 |
aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat |
20851104 |
T |
|
Q |
199 |
caattcctaggttcatctc |
217 |
Q |
|
|
|| |||||| |||| |||| |
|
|
T |
20851103 |
cagttcctaagttcttctc |
20851085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 20857926 - 20857712
Alignment:
Q |
4 |
catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac |
102 |
Q |
|
|
|||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||| |||||| |
|
|
T |
20857926 |
catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaac |
20857828 |
T |
|
Q |
103 |
agttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaa |
201 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
20857827 |
agttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcag |
20857728 |
T |
|
Q |
202 |
ttcctaggttcatctc |
217 |
Q |
|
|
|||||| |||| |||| |
|
|
T |
20857727 |
ttcctaagttcttctc |
20857712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 21706164 - 21706378
Alignment:
Q |
4 |
catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaac |
102 |
Q |
|
|
|||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| |
|
|
T |
21706164 |
catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaagaac |
21706262 |
T |
|
Q |
103 |
agttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaa |
201 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
21706263 |
agttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcag |
21706362 |
T |
|
Q |
202 |
ttcctaggttcatctc |
217 |
Q |
|
|
|||||| |||| |||| |
|
|
T |
21706363 |
ttcctaagttcttctc |
21706378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21710704 - 21710920
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag |
99 |
Q |
|
|
||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| || |||||||||||||| ||||| |
|
|
T |
21710704 |
aatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttcccaattttacc-ttaag |
21710801 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat |
198 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
21710802 |
aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat |
21710901 |
T |
|
Q |
199 |
caattcctaggttcatctc |
217 |
Q |
|
|
|| |||||| |||| |||| |
|
|
T |
21710902 |
cagttcctaagttcttctc |
21710920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 18712715 - 18712854
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||| |||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
18712715 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctaaatttttaatttcaagaacaattcaattagatcaattttcagaaatt |
18712813 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||| ||||||| |
|
|
T |
18712814 |
atatactatgattattgagagatagtctcacccatacctta |
18712854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 20045004 - 20044946
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg |
176 |
Q |
|
|
||||||||| || ||||||| || |||||| ||||||||||||||||||||||||||| |
|
|
T |
20045004 |
ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattg |
20044946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 32651516 - 32651627
Alignment:
Q |
60 |
aaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcc |
157 |
Q |
|
|
|||||| ||| |||||| ||||||||||||| ||| ||||||| |||||| ||| |||||||||||||| |||| ||||| |||||| ||||| || |
|
|
T |
32651516 |
aaatcagcatcaaccct-aattcccaatttttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtct |
32651614 |
T |
|
Q |
158 |
cacccttacctta |
170 |
Q |
|
|
||||||||||||| |
|
|
T |
32651615 |
cacccttacctta |
32651627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
20437078 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
20437024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
41112038 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
41112090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 135324 - 135530
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||||||| ||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
135324 |
aatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaattctcaattttacctttaaga |
135422 |
T |
|
Q |
101 |
acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaacaaatc |
199 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
135423 |
acagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagacaaatagcacagcaaatc |
135522 |
T |
|
Q |
200 |
aattccta |
207 |
Q |
|
|
| |||||| |
|
|
T |
135523 |
agttccta |
135530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 24320840 - 24320623
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||| |
|
|
T |
24320840 |
aatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aag |
24320742 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat |
198 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
24320741 |
aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat |
24320642 |
T |
|
Q |
199 |
caattcctaggttcatctc |
217 |
Q |
|
|
|| |||||| |||| |||| |
|
|
T |
24320641 |
cagttcctaagttcttctc |
24320623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 29643497 - 29643386
Alignment:
Q |
60 |
aaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatccc |
158 |
Q |
|
|
|||||||||| |||||||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||| | |
|
|
T |
29643497 |
aaatcatcatcaacccttaattctcaattttatcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctc |
29643398 |
T |
|
Q |
159 |
acccttacctta |
170 |
Q |
|
|
|||||||||||| |
|
|
T |
29643397 |
acccttacctta |
29643386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 18614195 - 18614327
Alignment:
Q |
39 |
attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattg-attaattttcagaaattgtatatta |
137 |
Q |
|
|
||||||| ||| || ||||| |||||| ||| || || |||||| |||||||| ||| ||||||| |||||||| || |||||||||||||| ||||| | |
|
|
T |
18614195 |
attcttacaccattcctttctaaatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatca |
18614294 |
T |
|
Q |
138 |
tgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
||| |||||| ||||| || ||||||||||||| |
|
|
T |
18614295 |
tgattattgagagatagtctcacccttacctta |
18614327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| | |||||||||||| ||| |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
23482192 |
aaacatgattcttacaccatccctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
23482094 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
23482093 |
atatactatgattattgagagatagtctcacccttacctta |
23482053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 44477623 - 44477693
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||||||| |||||||| |
|
|
T |
44477623 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaa |
44477693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 44492781 - 44492851
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||||||| |||||||| |
|
|
T |
44492781 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaa |
44492851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacct |
168 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||||| ||||||||||| |
|
|
T |
8727787 |
aattttcagaaattatagattatgattattgagggataatctcacccttacct |
8727735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 19236799 - 19237002
Alignment:
Q |
15 |
tcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattga |
113 |
Q |
|
|
||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||| |
|
|
T |
19236799 |
tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaagaacagttcaattga |
19236897 |
T |
|
Q |
114 |
ttaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttc |
212 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| |||| |
|
|
T |
19236898 |
ttaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttc |
19236997 |
T |
|
Q |
213 |
atctc |
217 |
Q |
|
|
|||| |
|
|
T |
19236998 |
ttctc |
19237002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 22461044 - 22461258
Alignment:
Q |
4 |
catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac |
102 |
Q |
|
|
|||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||||||||||| |||||| |
|
|
T |
22461044 |
catactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttacctt-aagaac |
22461141 |
T |
|
Q |
103 |
agttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaa-gcacaacaaatca |
200 |
Q |
|
|
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
22461142 |
agttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatca |
22461241 |
T |
|
Q |
201 |
attcctaggttcatctc |
217 |
Q |
|
|
||| || |||| |||| |
|
|
T |
22461242 |
gttcttaagttcttctc |
22461258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 22467668 - 22467882
Alignment:
Q |
4 |
catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac |
102 |
Q |
|
|
|||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||||||||||| |||||| |
|
|
T |
22467668 |
catactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttacctt-aagaac |
22467765 |
T |
|
Q |
103 |
agttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaa-gcacaacaaatca |
200 |
Q |
|
|
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
T |
22467766 |
agttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatca |
22467865 |
T |
|
Q |
201 |
attcctaggttcatctc |
217 |
Q |
|
|
||| || |||| |||| |
|
|
T |
22467866 |
gttcttaagttcttctc |
22467882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20772856 - 20773059
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| || |||||||||||||| ||||| |
|
|
T |
20772856 |
aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttacc-ttaag |
20772952 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |
|
|
T |
20772953 |
aacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaaga-taaagtacagcaaatc |
20773051 |
T |
|
Q |
200 |
aattccta |
207 |
Q |
|
|
|||||||| |
|
|
T |
20773052 |
aattccta |
20773059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20781631 - 20781834
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag |
99 |
Q |
|
|
||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| || |||||||||||||| ||||| |
|
|
T |
20781631 |
aatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttacc-ttaag |
20781727 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |
|
|
T |
20781728 |
aacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaaga-taaagtacagcaaatc |
20781826 |
T |
|
Q |
200 |
aattccta |
207 |
Q |
|
|
|||||||| |
|
|
T |
20781827 |
aattccta |
20781834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 24930097 - 24929917
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| |||| |||||||||||||| ||| |
|
|
T |
24930097 |
aatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaattttacctt-aag |
24930001 |
T |
|
Q |
100 |
aacagttcaattgattaattttc-agaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga |
182 |
Q |
|
|
||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
24930000 |
aacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaaga |
24929917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28909458 - 28909243
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| ||| |||||| | | |||||||| | ||| | ||||||| |||||||||||| || ||| | || ||||||||| | ||||| |
|
|
T |
28909458 |
aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag |
28909361 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
|||| || ||| | ||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
T |
28909360 |
aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaagcacagcaaatc |
28909261 |
T |
|
Q |
200 |
aattcctaggttcatctc |
217 |
Q |
|
|
||||||||||||| |||| |
|
|
T |
28909260 |
aattcctaggttcttctc |
28909243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28945853 - 28945638
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| ||| |||||| | | |||||||| | ||| | ||||||| |||||||||||| || ||| | || ||||||||| | ||||| |
|
|
T |
28945853 |
aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag |
28945756 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
|||| || ||| | ||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
T |
28945755 |
aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaagcacagcaaatc |
28945656 |
T |
|
Q |
200 |
aattcctaggttcatctc |
217 |
Q |
|
|
||||||||||||| |||| |
|
|
T |
28945655 |
aattcctaggttcttctc |
28945638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q |
2 |
atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaa |
101 |
Q |
|
|
|||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| | || ||||||||||||| ||||| |
|
|
T |
20820105 |
atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttccaattttacctt-aagaa |
20820201 |
T |
|
Q |
102 |
cagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa |
179 |
Q |
|
|
| ||| |||| ||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
20820202 |
cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa |
20820279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q |
2 |
atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaa |
101 |
Q |
|
|
|||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| | || ||||||||||||| ||||| |
|
|
T |
20827205 |
atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttccaattttacctt-aagaa |
20827301 |
T |
|
Q |
102 |
cagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaa |
179 |
Q |
|
|
| ||| |||| ||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
20827302 |
cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa |
20827379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28896210 - 28895995
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| ||| |||||| | | |||||||| | ||| | ||||||| |||||||||||| || ||| | || ||||||||| | ||||| |
|
|
T |
28896210 |
aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag |
28896113 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
|||| || ||| | ||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||||| |
|
|
T |
28896112 |
aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaaagcacagcaaatc |
28896013 |
T |
|
Q |
200 |
aattcctaggttcatctc |
217 |
Q |
|
|
||||||||||||| |||| |
|
|
T |
28896012 |
aattcctaggttcttctc |
28895995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28925036 - 28924821
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| ||| |||||| | | |||||||| | ||| | ||||||| |||||||||||| || ||| | || ||||||||| | ||||| |
|
|
T |
28925036 |
aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag |
28924939 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
|||| || ||| | ||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||||| |
|
|
T |
28924938 |
aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaaagcacagcaaatc |
28924839 |
T |
|
Q |
200 |
aattcctaggttcatctc |
217 |
Q |
|
|
||||||||||||| |||| |
|
|
T |
28924838 |
aattcctaggttcttctc |
28924821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28889506 - 28889291
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| ||| |||||| | | |||||||| | ||| | ||||||| |||||||||||| || ||| | || ||||||||| | ||||| |
|
|
T |
28889506 |
aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag |
28889409 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatc |
199 |
Q |
|
|
|||| || ||| | ||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| |
|
|
T |
28889408 |
aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaaaagcaatgcaaatc |
28889309 |
T |
|
Q |
200 |
aattcctaggttcatctc |
217 |
Q |
|
|
||||||||||||| |||| |
|
|
T |
28889308 |
aattcctaggttcttctc |
28889291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 34829970 - 34830146
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||||| ||||||||| ||||||| |||| ||||||||| | |||| |||||||||||| ||| | || |||||| |||||||| ||| |||| |
|
|
T |
34829970 |
aatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctcaattttatcttcaaga |
34830068 |
T |
|
Q |
101 |
acagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|| ||| ||| |||| ||||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||| |
|
|
T |
34830069 |
actattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca |
34830146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
18408083 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
18407985 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
18407984 |
atatattatgattattgagagatagtctcacccttacctta |
18407944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| | |||||||||||| ||| |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
23111339 |
aaacatgattcttacaccatccctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
23111241 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
23111240 |
atatactatgattattgagagatagtctcacccttacctta |
23111200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga |
172 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||||| |
|
|
T |
22438802 |
aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga |
22438746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 38144591 - 38144536
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
38144591 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
38144536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
19512387 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
19512441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
28370109 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
28370055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
23528634 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
23528686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0348 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0348
Description:
Target: scaffold0348; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9221 - 9396
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||||||| ||||||| ||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
9221 |
aatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaattcccaattttacttttaaga |
9320 |
T |
|
Q |
101 |
acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg |
176 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
9321 |
acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg |
9396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 139; Significance: 7e-73; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25181099 - 25180882
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||| ||||||||||||| | || ||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||| |
|
|
T |
25181099 |
aatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aag |
25181001 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat |
198 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
25181000 |
aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaat |
25180901 |
T |
|
Q |
199 |
caattcctaggttcatctc |
217 |
Q |
|
|
|| |||||| |||| |||| |
|
|
T |
25180900 |
cagttcctaagttcttctc |
25180882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10462 - 10669
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaa-ttcccaattttacctttaag |
99 |
Q |
|
|
||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |
|
|
T |
10462 |
aatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaag |
10560 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaat |
198 |
Q |
|
|
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |
|
|
T |
10561 |
aacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaaagacaaaaagcacagcaaat |
10660 |
T |
|
Q |
199 |
caattccta |
207 |
Q |
|
|
|| |||||| |
|
|
T |
10661 |
cagttccta |
10669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 26885103 - 26885284
Alignment:
Q |
37 |
tgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatat |
135 |
Q |
|
|
||||||||| ||||||||||||||||| | ||||| || |||||| ||||||| || |||||| ||| ||| |||||||||||||||||| || || |
|
|
T |
26885103 |
tgattcttacaccttttctttcaaaattagcattataccctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacat |
26885202 |
T |
|
Q |
136 |
tatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| |||||| |||| |||| |
|
|
T |
26885203 |
ta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagttcttctc |
26885284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 27207858 - 27207672
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg |
130 |
Q |
|
|
|||| ||||||||| |||||| |||||||||||| | | || |||||| |||||||| ||| |||||| ||| || |||||||||||||||||| |
|
|
T |
27207858 |
aaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttagattaattttcagaaatta |
27207760 |
T |
|
Q |
131 |
tatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| |||| |||| |
|
|
T |
27207759 |
tacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc |
27207672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 23168351 - 23168272
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaa |
197 |
Q |
|
|
|||||||||||| || ||||||| | |||||||||||||||||||||||||||||||||| | ||||||||||| |||| |
|
|
T |
23168351 |
ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaaagcacagcaaa |
23168272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 23579608 - 23579529
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaa |
197 |
Q |
|
|
|||||||||||| || ||||||| | |||||||||||||||||||||||||||||||||| | ||||||||||| |||| |
|
|
T |
23579608 |
ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaaaagcacagcaaa |
23579529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||| ||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
23265058 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctcaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
23265156 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
23265157 |
atatactatgattattgagagatagtctcacccttacctta |
23265197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||| ||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
23280126 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctcaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
23280224 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
23280225 |
atatactatgattattgagagatagtctcacccttacctta |
23280265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 5706075 - 5706008
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||| |||| || ||||||| || ||| ||||| || |||||||||||||||||||| |||||||| |
|
|
T |
5706075 |
tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaa |
5706008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
6483718 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
6483772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
6487185 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
6487239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| ||||| |||| |||||| ||||| || ||||||||||||| |
|
|
T |
21908360 |
aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta |
21908414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 27366566 - 27366533
Alignment:
Q |
153 |
aatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||| ||||||||||||||||||||||||||||| |
|
|
T |
27366566 |
aatctcacccttaccttagaattgcaaagacaaa |
27366533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
26583830 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
26583882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 79660 - 79442
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| ||| |
|
|
T |
79660 |
aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aag |
79562 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa |
197 |
Q |
|
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |
|
|
T |
79561 |
aacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaa |
79462 |
T |
|
Q |
198 |
tcaattcctaggttcatctc |
217 |
Q |
|
|
||| |||||| |||| |||| |
|
|
T |
79461 |
tcagttcctaagttcttctc |
79442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 136; Significance: 4e-71; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 20008114 - 20007900
Alignment:
Q |
4 |
catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaac |
102 |
Q |
|
|
|||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||| |||||| |
|
|
T |
20008114 |
catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaac |
20008016 |
T |
|
Q |
103 |
agttcaattgattaa-ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaa |
201 |
Q |
|
|
||||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
T |
20008015 |
agttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgcaaagacaaaagcacagcaaatgag |
20007916 |
T |
|
Q |
202 |
ttcctaggttcatctc |
217 |
Q |
|
|
|||||| |||| |||| |
|
|
T |
20007915 |
ttcctaagttcttctc |
20007900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 9099240 - 9099036
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| |||| |||||||||||||| ||| |
|
|
T |
9099240 |
aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttacctt-aag |
9099144 |
T |
|
Q |
100 |
aacagttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaat |
198 |
Q |
|
|
||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |
|
|
T |
9099143 |
aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaaga-taaagtgcagcaaat |
9099045 |
T |
|
Q |
199 |
caattccta |
207 |
Q |
|
|
||||||||| |
|
|
T |
9099044 |
caattccta |
9099036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21364648 - 21364436
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||| ||||||||||| |||||||||| |||||| | ||||| | ||||||| ||||| |||||||||| | |||||||||||||| | || |
|
|
T |
21364648 |
aatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaatttcccaattttaccataaa-- |
21364553 |
T |
|
Q |
101 |
acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatca |
200 |
Q |
|
|
|||||| ||||| ||||||||||||||| |||||||| | || |||| |||||||||||||||||||| |||||||||||||||||||||| |||| || |
|
|
T |
21364552 |
acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaaagcacagcaaaaca |
21364453 |
T |
|
Q |
201 |
attcctaggttcatctc |
217 |
Q |
|
|
|||||||||||| |||| |
|
|
T |
21364452 |
attcctaggttcttctc |
21364436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23968630 - 23968418
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||| ||||||||||| |||||||||| |||||| | ||||| | ||||||| ||||| |||||||||| | |||||||||||||| | || |
|
|
T |
23968630 |
aatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaatttcccaattttaccataaa-- |
23968535 |
T |
|
Q |
101 |
acagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatca |
200 |
Q |
|
|
|||||| ||||| ||||||||||||||| |||||||| | || |||| |||||||||||||||||||| |||||||||||||||||||||| |||| || |
|
|
T |
23968534 |
acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaaaagcacagcaaaaca |
23968435 |
T |
|
Q |
201 |
attcctaggttcatctc |
217 |
Q |
|
|
|||||||||||| |||| |
|
|
T |
23968434 |
attcctaggttcttctc |
23968418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 31252357 - 31252493
Alignment:
Q |
51 |
tttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaa |
149 |
Q |
|
|
||||||||||||||| | | | || |||||| |||||||| ||| |||||| ||||||| |||||||||||||||||| |||||||| | ||| ||| |
|
|
T |
31252357 |
tttctttcaaaatcagcctcataccctaattctcaattttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaa |
31252456 |
T |
|
Q |
150 |
gataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||| |
|
|
T |
31252457 |
gataatctcacccttaccttagaattgcaaagacaaa |
31252493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 15458492 - 15458560
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15458492 |
ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
15458560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 15465087 - 15465155
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15465087 |
ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
15465155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 11288721 - 11288647
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcaca |
192 |
Q |
|
|
|||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
T |
11288721 |
ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaaaaacaca |
11288647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|||||| ||||||| || ||||||| |||||||||||| || ||||||||||||||||||||| |
|
|
T |
10986235 |
aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca |
10986173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 34640041 - 34639971
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||||| || |||| || |||||| ||||| || |||||||||||||||||||| |||||||| |
|
|
T |
34640041 |
aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaa |
34639971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 34646715 - 34646645
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||||| || |||| || |||||| ||||| || |||||||||||||||||||| |||||||| |
|
|
T |
34646715 |
aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaa |
34646645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 9187410 - 9187550
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt-acctttaagaacagttcaatt-gat-taattttcagaaat |
128 |
Q |
|
|
|||| ||||||||| | | || |||||||||||| ||| |||||| ||||||||||||| | || ||||||| ||||||| ||| || ||||||||||| |
|
|
T |
9187410 |
aaacatgattcttacatcattcctttcaaaatcagcatcaaccct-aattcccaatttttatattcaagaacaattcaattagatctatttttcagaaat |
9187508 |
T |
|
Q |
129 |
tgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
| | ||||| || |||||| ||||| || ||||||||||||| |
|
|
T |
9187509 |
tatgtattaagattattgagagatagtctcacccttacctta |
9187550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 28288537 - 28288488
Alignment:
Q |
143 |
attgaaagataatcccacccttaccttagaattgcaaagacaaaagcaca |
192 |
Q |
|
|
||||| ||||| || |||||||||||||||||||||||||||||| |||| |
|
|
T |
28288537 |
attgagagatagtctcacccttaccttagaattgcaaagacaaaaacaca |
28288488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
29614201 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
29614146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
4477858 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
4477912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| |
|
|
T |
23839199 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacctta |
23839253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|||||||||||||| |||| ||||| |||||| ||||| || |||||| |||||||| ||||| |
|
|
T |
24512898 |
aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca |
24512836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 24563475 - 24563508
Alignment:
Q |
153 |
aatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||| ||||||||||||||||||||||||||||| |
|
|
T |
24563475 |
aatctcacccttaccttagaattgcaaagacaaa |
24563508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
12168366 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
12168418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
19287275 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
19287327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
19785921 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
19785869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
19878459 |
tttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
19878511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1318 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold1318
Description:
Target: scaffold1318; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 2051 - 1865
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgt |
131 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | |
|
|
T |
2051 |
aaacctaattcttacaccttttctttcaaaatcatcattaacccttaattcccaattttactttcaagaacagttcaattgattaattttcagaaattat |
1952 |
T |
|
Q |
132 |
atattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||| |||| |||| |
|
|
T |
1951 |
atattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctc |
1865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 16147000 - 16146815
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaa-ttttacctttaag |
99 |
Q |
|
|
||||||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||| ||| |
|
|
T |
16147000 |
aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttacctt-aag |
16146902 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16146901 |
aacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
16146815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 27906181 - 27906328
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattg-attaattttcagaaattg |
130 |
Q |
|
|
|||| ||||||||| ||||||||||||||||||| ||| | || |||||| |||||||| ||| |||||| ||| ||| ||||||||||||||||| |
|
|
T |
27906181 |
aaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctcaattttatcttcaagaactattctattatattaattttcagaaatta |
27906280 |
T |
|
Q |
131 |
tatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|| ||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
T |
27906281 |
tacattatgatcattgaaagataatcccacccttatcttagaattgca |
27906328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q |
57 |
tcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataat |
155 |
Q |
|
|
||||||||||||| |||||| ||||||||||||| ||| ||||||| ||||||| |||||||||||||||||| |||||||||| |||||| |||| | |
|
|
T |
14486601 |
tcaaaatcatcatcaaccctatattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagt |
14486700 |
T |
|
Q |
156 |
cccacccttacct |
168 |
Q |
|
|
| ||||||||||| |
|
|
T |
14486701 |
ctcacccttacct |
14486713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 53483708 - 53483775
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||| |||| || ||||||| |||||| ||||| || |||||||||||||||||||| |||||||| |
|
|
T |
53483708 |
tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaa |
53483775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga |
172 |
Q |
|
|
|||||||||||||| |||| ||||| |||||| ||||| || ||||||||||||||| |
|
|
T |
15408140 |
aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga |
15408196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 50141 - 49922
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
||||||||||||| | || || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| | ||||| |
|
|
T |
50141 |
aatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaatttttaccttaag |
50042 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa-agcacaac-aaa |
197 |
Q |
|
|
||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
T |
50041 |
aacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacaacaaaa |
49942 |
T |
|
Q |
198 |
tcaattcctaggttcatctc |
217 |
Q |
|
|
||| |||||| |||| |||| |
|
|
T |
49941 |
tcagttcctaagttcttctc |
49922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 217
Target Start/End: Original strand, 889 - 1098
Alignment:
Q |
6 |
tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacag |
104 |
Q |
|
|
|||||||||||||| ||||| ||| |||||| | ||||| || ||||||| ||||||| |||||||||| | || |||||||||||| | |||||||| |
|
|
T |
889 |
tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccat-aagaacag |
985 |
T |
|
Q |
105 |
ttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaagcacaacaaatcaattc |
204 |
Q |
|
|
|| ||||| ||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
986 |
ttaaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaaaagcacagcaaatcaattc |
1085 |
T |
|
Q |
205 |
ctaggttcatctc |
217 |
Q |
|
|
|||||||| |||| |
|
|
T |
1086 |
ctaggttcttctc |
1098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0384 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0384
Description:
Target: scaffold0384; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16232 - 16059
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||||||||||||||| |||||||| | |||||||||||| || ||||||| ||||||||||||||||||| |||||| | ||||| ||| || | |
|
|
T |
16232 |
aatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaattccaatttttatcttaaa-a |
16136 |
T |
|
Q |
101 |
acagttcaattgattaatttt-cagaaattgtatattatgactattgaaagataatcccacccttaccttagaattg |
176 |
Q |
|
|
|||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
16135 |
acagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattg |
16059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1469 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1469
Description:
Target: scaffold1469; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 1242 - 1425
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttacctttaag |
99 |
Q |
|
|
|||||||||||||||||| || |||||| |||||||| ||||| | ||||||| |||||||||||||| ||| | || |||||||||||||| ||| |
|
|
T |
1242 |
aatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaattttacctt-aag |
1338 |
T |
|
Q |
100 |
aacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
||||||| ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
1339 |
aacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaaa |
1425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 6015 - 5842
Alignment:
Q |
13 |
catcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt- |
111 |
Q |
|
|
||||||| |||||||| |||| | ||||||| |||||| |||||||||||| | | | || |||||| |||||||| ||| |||||| ||||||| |
|
|
T |
6015 |
catcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctcaattttatcttcaagaactattcaatta |
5917 |
T |
|
Q |
112 |
gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
5916 |
gattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
5842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 10156 - 10341
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaaattgt |
131 |
Q |
|
|
|||| ||||||||| ||| | |||||||||| | ||| |||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||| |
|
|
T |
10156 |
aaacatgattcttacaccatccctttcaaaattagcatcaaccct-aattcccaattttattctcatgaacaattcaattgattaattttcagaaattac |
10254 |
T |
|
Q |
132 |
atattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
||||||||| ||||| ||||||||| ||||||||||||||||||| | |||| ||||||||| |||||| |||||| |||| |||| |
|
|
T |
10255 |
atattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctc |
10341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 91372 - 91191
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt---accttta |
97 |
Q |
|
|
||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| |||||| |||||||||| | ||||||||||| ||| | | |
|
|
T |
91372 |
aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttttaccataa |
91275 |
T |
|
Q |
98 |
agaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga |
182 |
Q |
|
|
| ||||||| ||||| ||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
91274 |
a-aacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga |
91191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 97098 - 96917
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaatttt---accttta |
97 |
Q |
|
|
||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| |||||| |||||||||| | ||||||||||| ||| | | |
|
|
T |
97098 |
aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttttaccataa |
97001 |
T |
|
Q |
98 |
agaacagttcaattgattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga |
182 |
Q |
|
|
| ||||||| ||||| ||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
97000 |
a-aacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaaga |
96917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
111885 |
ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
111938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 217
Target Start/End: Complemental strand, 493162 - 492981
Alignment:
Q |
37 |
tgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatat |
135 |
Q |
|
|
||||||||| ||||||||||||||||||| ||||| || |||||| | |||||| || |||||| ||| ||| |||||||||||||||||| || || |
|
|
T |
493162 |
tgattcttacaccttttctttcaaaatcagcattataccctaattctctattttatctccaagaactattccattagattaattttcagaaattatacat |
493063 |
T |
|
Q |
136 |
tatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcatctc |
217 |
Q |
|
|
|| || ||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| |||||| |||| |||| |
|
|
T |
493062 |
ta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctc |
492981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0261 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 23740 - 23562
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaaga |
100 |
Q |
|
|
||||||||| | ||||||| ||||||| |||| ||||||||| | ||||||||||||||||| ||| | || |||||| ||||||| ||| |||| |
|
|
T |
23740 |
aatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctcaattttgtcttcaaga |
23641 |
T |
|
Q |
101 |
acagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|| ||| || |||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
T |
23640 |
actattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca |
23562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1461 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1461
Description:
Target: scaffold1461; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 1592 - 1485
Alignment:
Q |
63 |
tcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacc |
161 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||| |||||| || |||| ||||||||| |||| |
|
|
T |
1592 |
tcatcattaacccttaattcccaattttatctttatgaacaac-caattagattaattttcagaaattgcatattaagatcattgcaagataatctcacc |
1494 |
T |
|
Q |
162 |
cttacctta |
170 |
Q |
|
|
||||||||| |
|
|
T |
1493 |
cttacctta |
1485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0249 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0249
Description:
Target: scaffold0249; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 13947 - 13879
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13947 |
ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa |
13879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0453 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0453
Description:
Target: scaffold0453; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 10689 - 10546
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg |
130 |
Q |
|
|
|||| ||||||||| |||||| |||||||||||| | | | || |||||| |||||||| ||| |||||| ||| ||| |||||||||||||||||| |
|
|
T |
10689 |
aaacatgattcttacaccttt-ctttcaaaatcagcctcataccctaattctcaattttatcttcaagaactattctattagattaattttcagaaatta |
10591 |
T |
|
Q |
131 |
tatattatgactattgaaagataatcccacccttaccttagaatt |
175 |
Q |
|
|
|| |||| || |||||||||||||||||| |||||||||||||| |
|
|
T |
10590 |
tacattaagatcattgaaagataatcccacacttaccttagaatt |
10546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
16736 |
aaacatgattcttaaaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
16834 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
16835 |
atatactatgattattgagagatagtctcacccttacctta |
16875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 6 - 70
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaaga |
182 |
Q |
|
|
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6 |
ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaaga |
70 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 73200 - 73347
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattg |
130 |
Q |
|
|
|||| ||||||||| ||| ||||||||||||||| ||| | || |||||| |||||||| ||| |||| | | | ||| |||||||||||| ||||| |
|
|
T |
73200 |
aaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctcaattttatcttcaagagctatcctattagattaattttcataaatta |
73299 |
T |
|
Q |
131 |
tatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|| ||||||| |||||||||||||||||||||||||| | ||||||| |
|
|
T |
73300 |
tacattatgatcattgaaagataatcccacccttacctcataattgca |
73347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0720 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0720
Description:
Target: scaffold0720; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 3559 - 3386
Alignment:
Q |
14 |
atcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-g |
112 |
Q |
|
|
|||||| |||||||| |||| ||||||||| |||||| |||||||||||| | | || |||||| |||||||| ||| |||||| ||| || | |
|
|
T |
3559 |
atcaaattacaacatattaaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattctcaattttatcttcaagaactattcttttag |
3461 |
T |
|
Q |
113 |
attaattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaa |
187 |
Q |
|
|
||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
3460 |
attaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaa |
3386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0553
Description:
Target: scaffold0553; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 10250 - 10148
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcat |
214 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||| | |||| ||||||||| |||||| |||||| |||| | |
|
|
T |
10250 |
aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt |
10151 |
T |
|
Q |
215 |
ctc |
217 |
Q |
|
|
||| |
|
|
T |
10150 |
ctc |
10148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 11111 - 11079
Alignment:
Q |
143 |
attgaaagataatcccacccttaccttagaatt |
175 |
Q |
|
|
|||||| |||||||||||||||||||||||||| |
|
|
T |
11111 |
attgaaggataatcccacccttaccttagaatt |
11079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0544 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0544
Description:
Target: scaffold0544; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 1580 - 1478
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacaacaaatcaattcctaggttcat |
214 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||| | |||| ||||||||| |||||| |||||| |||| | |
|
|
T |
1580 |
aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt |
1481 |
T |
|
Q |
215 |
ctc |
217 |
Q |
|
|
||| |
|
|
T |
1480 |
ctc |
1478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0146
Description:
Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
13548 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
13646 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
| ||||| || |||||| ||||| || ||||||||||||| |
|
|
T |
13647 |
atgtattaagattattgagagatagtctcacccttacctta |
13687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 111686 - 111756
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||||||||| |||||||| |
|
|
T |
111686 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaa |
111756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
11905 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
11850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0099
Description:
Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12841 - 13019
Alignment:
Q |
1 |
aatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttaatt--cccaatttt-acctt |
95 |
Q |
|
|
||||||||||||||| || |||||||||| |||||| |||||||| | |||| |||| |||||| |||||||||| |||| ||||||||| ||||| |
|
|
T |
12841 |
aatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatttttacctt |
12940 |
T |
|
Q |
96 |
taagaacagttcaatt---gattaattttc-agaaattgtatattatgactattg-aaagataatcccacccttacctt |
169 |
Q |
|
|
||||||||||| || | |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||| |
|
|
T |
12941 |
taagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt |
13019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0461 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0461
Description:
Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| || |||||| ||||||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
147 |
aaacatgattcttacaccattcctttcaaaatcagcaacaaccct-aattcccaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
49 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
| ||||| || |||||| ||||| || ||||||||||||| |
|
|
T |
48 |
atgtattaagattattgagagatagtctcacccttacctta |
8 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 116812 - 116951
Alignment:
Q |
32 |
aaacctgattcttataccttttctttcaaaatcatcattaacccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaatt |
129 |
Q |
|
|
|||| ||||||||| ||| || |||||||||||| ||| |||||| ||||| |||||| ||| ||||||| ||||||| ||| |||||||||||||| |
|
|
T |
116812 |
aaacatgattcttacaccattcctttcaaaatcagcatcaaccct-aattctaaatttttattttcaagaacaattcaattagatcaattttcagaaatt |
116910 |
T |
|
Q |
130 |
gtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
|||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
116911 |
atatactatgattattgagagatagtctcacccttacctta |
116951 |
T |
|
Back To:
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Target: scaffold2054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2054
Description:
Target: scaffold2054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 717 - 770
Alignment:
Q |
118 |
ttttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||| ||||||| || ||||||||||||||||||||||||||||| |
|
|
T |
717 |
ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag |
770 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0483 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0483
Description:
Target: scaffold0483; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 11137 - 11021
Alignment:
Q |
55 |
tttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaa-ttgtatattatgactattgaaagat |
152 |
Q |
|
|
||||||| ||||||| |||||||||| |||||||||| | ||| ||||| ||||| |||||||||||||||| ||| |||||| || |||| ||||| |
|
|
T |
11137 |
tttcaaagtcatcatcaacccttaatccccaattttatccttatgaacaaa-caattagattaattttcagaaaattgcatattaagatcattgcaagat |
11039 |
T |
|
Q |
153 |
aatcccacccttacctta |
170 |
Q |
|
|
|||| ||||||||||||| |
|
|
T |
11038 |
aatctcacccttacctta |
11021 |
T |
|
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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 1309 - 1441
Alignment:
Q |
39 |
attcttataccttttctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaaattgtatatta |
137 |
Q |
|
|
||||||| ||| || |||||||||||| ||| || || |||||| || ||||| | | ||||||| || |||| ||| |||||||| ||||| ||||| | |
|
|
T |
1309 |
attcttacaccattcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatca |
1408 |
T |
|
Q |
138 |
tgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
||| ||||||||||| || ||||||||||||| |
|
|
T |
1409 |
tgatcattgaaagatagtctcacccttacctta |
1441 |
T |
|
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Target: scaffold0107 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 40586 - 40524
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
|||||||||||||| |||| ||||| |||||| ||||| || ||||||||||||||| ||||| |
|
|
T |
40586 |
aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca |
40524 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 102026 - 101928
Alignment:
Q |
74 |
ccttaattcccaattttaccttt-aagaacagttcaatt-gattaattttcagaaattgtatattatgactattgaaagataatcccacccttacctta |
170 |
Q |
|
|
||||||||||||||||| ||| ||||||| ||||||| ||| ||||||||| |||| |||| ||||| |||||| ||||| || ||||||||||||| |
|
|
T |
102026 |
ccttaattcccaatttttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta |
101928 |
T |
|
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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 135474 - 135530
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga |
172 |
Q |
|
|
|||||||||||||| |||| ||||| |||||| ||||| || ||||||||||||||| |
|
|
T |
135474 |
aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga |
135530 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0924 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0924
Description:
Target: scaffold0924; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
805 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
750 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0247 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0247
Description:
Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
11342 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
11397 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:
Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttag |
171 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || |||||||||||||| |
|
|
T |
30858 |
aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag |
30913 |
T |
|
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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 45326 - 45259
Alignment:
Q |
119 |
tttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa |
186 |
Q |
|
|
|||||| |||| || ||||||| |||||| ||||| || ||||||||||||||| |||| |||||||| |
|
|
T |
45326 |
tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaa |
45259 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0235 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0235
Description:
Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 22646 - 22585
Alignment:
Q |
117 |
attttcagaaattgtatattatgactattgaaagataatcccacccttaccttagaattgca |
178 |
Q |
|
|
||||||||||||| |||| ||||| |||||| ||||| || |||||||||||| || ||||| |
|
|
T |
22646 |
attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgca |
22585 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0310 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0310
Description:
Target: scaffold0310; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttaccttaga |
172 |
Q |
|
|
|||||||||||||| || |||||| |||||| ||||| || ||||||||||||||| |
|
|
T |
17644 |
aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga |
17700 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q |
116 |
aattttcagaaattgtatattatgactattgaaagataatcccacccttacct |
168 |
Q |
|
|
|||||||||||||| || ||||||| |||||| ||||| || ||||||||||| |
|
|
T |
14450 |
aattttcagaaattatagattatgattattgagagatagtctcacccttacct |
14398 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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