View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0304_low_9 (Length: 318)
Name: NF0304_low_9
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0304_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 11683286 - 11683013
Alignment:
| Q |
1 |
tatccatatctggtgccatttatatctacttcaccatctttaatggcagtccttgcaatgttttccttaacttcaatagaataagttgtcgttggatcgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11683286 |
tatccatatctggtgccatttatatctacttcaccatctttaatggcagtccttgcaatgttttccttaacttcaatagaataagttgtcgttggatcgg |
11683187 |
T |
|
| Q |
101 |
ttttttaatctcttttaaggtcagttagctaattatgccacacacatcattttggtgagcgctgtaaggcttttaagacatacgactgacataacttttt |
200 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
11683186 |
ttttttaatctcttttaaggtcagttagctaattatgccacacacatcattttggtgagcgttgtaaggcttttaagacatacgactgacataacttttt |
11683087 |
T |
|
| Q |
201 |
tgtaattatacgatctgctcgttaagccgaccttttgaataaaaagtgacatgacaatgatgttgagaacacag |
274 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
11683086 |
tgtaatcatacgatctgctcgttaagccgaccctttgaataaaaagtgacatgacaatgatgttgagaacacag |
11683013 |
T |
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