View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0805_low_5 (Length: 251)
Name: NF0805_low_5
Description: NF0805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0805_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 51425130 - 51424893
Alignment:
| Q |
1 |
atcagtacctaagaaaagaaagttgtttgaagactttgttaaatatattccatttatagccaaggttggtgaggaacacaatagaaatcataaacctctt |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51425130 |
atcagtacctatgaaaagaaagttgtttgaagactttgttaaatatattccatttatagccaaggttggtgaggaacacaatagaaatcataaacctctt |
51425031 |
T |
|
| Q |
101 |
aattaattatagccaacgttatcaatggatggttctcttaattaattaccatcttgcttaattagctgcgagaaaaaagctcgatcttcctaatgcaata |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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|
| T |
51425030 |
aattaattatagccaacgttatcaatggatggttctcttaattaattaccatcttgcttaattagctgcgagaaataagctcgatcttcctaatgcaata |
51424931 |
T |
|
| Q |
201 |
tcctaaacttaaaacatgacctcttaaacaaccaagta |
238 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |
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|
| T |
51424930 |
tcctaaacttaaaacataacctcttaaacaaccaagta |
51424893 |
T |
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