View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0851-INSERTION-3 (Length: 318)
Name: NF0851-INSERTION-3
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0851-INSERTION-3 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 304
Target Start/End: Original strand, 2366719 - 2367016
Alignment:
| Q |
8 |
cagatattaataatttctctattttttccttatagnnnnnnn-ttgaaatttgtcacttacgaaagaaaaaacttataaatttgtaagtgttattaagaa |
106 |
Q |
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| T |
2366719 |
cagatattaataatttatctattttttccttatagaaaaaaaatttaaatttgtcacttacgaaagaaaaaacttataaatttgtaagtgttattaagaa |
2366818 |
T |
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| Q |
107 |
gttacattgtaatgtaaagttcttatgttgcacatctctttcctagagggtaaggtctatagctttgtaatcagatattgtgatttttcactcctattaa |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
2366819 |
gttacattgtaatgtaaagttcttatgttgcacatctctttcctagagggtaaggtctatagctttgtaatcagatattgtgattattcactcctattaa |
2366918 |
T |
|
| Q |
207 |
gctctttctcagaatccaataaagaaatttatcttagaaaaataagcctctcagattaatatgaaatttctctcctgatcagtcactactttaactag |
304 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
2366919 |
gctctttctcataatccaataaagaaatttatcttagaaaaataagcctctcagattaccatgaaatttctctcctgatcagtcactactttaactag |
2367016 |
T |
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