View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0851-INSERTION-8 (Length: 245)
Name: NF0851-INSERTION-8
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0851-INSERTION-8 |
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| [»] chr5 (2 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 245
Target Start/End: Original strand, 12750000 - 12750031
Alignment:
| Q |
214 |
cctgagaactactctatcacacatgacaaatg |
245 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
12750000 |
cctgagaactactctatcacacatgacaaatg |
12750031 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 245
Target Start/End: Original strand, 12813113 - 12813144
Alignment:
| Q |
214 |
cctgagaactactctatcacacatgacaaatg |
245 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
12813113 |
cctgagaactactctatcacacatgacaaatg |
12813144 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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