View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0851_low_36 (Length: 280)
Name: NF0851_low_36
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0851_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 14 - 269
Target Start/End: Complemental strand, 42361140 - 42360885
Alignment:
| Q |
14 |
acaggatgcttcacaatcaaatgaataccaccaaagggttttaagaaatctataattctttcaatttcatctattgacctatgacaaatcgccttcgaca |
113 |
Q |
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| T |
42361140 |
acaggatgcttcacaatcaaatgaataccaccaaagggttttaagaaatctataattctttcaatttcatctattgacctatgacaaatcgccttcgaca |
42361041 |
T |
|
| Q |
114 |
aattcactttgttgagcacatgtacaatcttatcaacaggaattccactatcaacaagcaatcgaaccttctgaggaaacccagataaatttttcgtttc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42361040 |
aattcactttgttgagcacatgtacaatcttatcaacaggaattccactatcaacaagcaatcgaaccttctgaggaaacccagataaatttttcgtttc |
42360941 |
T |
|
| Q |
214 |
attagctaataaaagccgcttcagcttcgatttctcaagttgtccttgtaattcat |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42360940 |
attagctaataaaagccgcttcagcttcgatttctcaagttgtccttgtaattcat |
42360885 |
T |
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