View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0851_low_42 (Length: 251)

Name: NF0851_low_42
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0851_low_42
NF0851_low_42
[»] chr4 (16 HSPs)
chr4 (1-244)||(18981649-18981892)
chr4 (155-238)||(3329902-3329987)
chr4 (163-238)||(4419177-4419254)
chr4 (155-238)||(53619492-53619577)
chr4 (160-236)||(25504206-25504284)
chr4 (155-208)||(39001303-39001357)
chr4 (162-236)||(16955373-16955449)
chr4 (156-232)||(48657037-48657115)
chr4 (155-208)||(55933607-55933661)
chr4 (100-238)||(26521339-26521479)
chr4 (155-238)||(50001042-50001127)
chr4 (164-235)||(38535688-38535760)
chr4 (155-208)||(31847009-31847063)
chr4 (163-222)||(600824-600885)
chr4 (179-238)||(23242831-23242891)
chr4 (142-236)||(30940850-30940946)
[»] chr7 (17 HSPs)
chr7 (127-236)||(982827-982938)
chr7 (162-236)||(48539094-48539170)
chr7 (142-207)||(28517435-28517501)
chr7 (157-236)||(21326956-21327037)
chr7 (155-232)||(45003019-45003098)
chr7 (155-236)||(19277197-19277282)
chr7 (155-208)||(45613989-45614043)
chr7 (155-236)||(24527495-24527578)
chr7 (154-234)||(4501164-4501246)
chr7 (158-238)||(5825182-5825264)
chr7 (155-223)||(27027761-27027831)
chr7 (163-234)||(41117890-41117963)
chr7 (157-208)||(38839234-38839286)
chr7 (162-235)||(5972335-5972410)
chr7 (163-235)||(34772696-34772770)
chr7 (160-208)||(2904291-2904340)
chr7 (175-234)||(42295304-42295364)
[»] chr3 (17 HSPs)
chr3 (155-235)||(32546701-32546783)
chr3 (155-238)||(39583345-39583430)
chr3 (159-236)||(53785619-53785698)
chr3 (161-232)||(4763915-4763987)
chr3 (142-232)||(44198660-44198752)
chr3 (155-236)||(13582416-13582499)
chr3 (155-232)||(26772664-26772743)
chr3 (179-238)||(38145987-38146047)
chr3 (155-232)||(38671002-38671081)
chr3 (179-223)||(4669794-4669839)
chr3 (155-238)||(26856878-26856963)
chr3 (155-201)||(5338552-5338599)
chr3 (155-236)||(37133117-37133200)
chr3 (162-203)||(3443464-3443506)
chr3 (155-208)||(26276521-26276575)
chr3 (155-236)||(44739-44825)
chr3 (175-238)||(37992260-37992324)
[»] chr6 (6 HSPs)
chr6 (161-238)||(3137363-3137442)
chr6 (155-236)||(32115624-32115707)
chr6 (155-208)||(7749387-7749441)
chr6 (155-204)||(17249456-17249506)
chr6 (155-238)||(33220827-33220912)
chr6 (179-236)||(959512-959570)
[»] scaffold0009 (1 HSPs)
scaffold0009 (155-236)||(103012-103095)
[»] chr8 (12 HSPs)
chr8 (155-236)||(22589454-22589537)
chr8 (161-238)||(38815206-38815285)
chr8 (164-232)||(24451036-24451105)
chr8 (157-238)||(3187878-3187961)
chr8 (155-238)||(39434573-39434658)
chr8 (155-236)||(6592482-6592564)
chr8 (140-236)||(6618176-6618273)
chr8 (187-236)||(24124967-24125017)
chr8 (104-204)||(24320191-24320293)
chr8 (161-208)||(4699783-4699831)
chr8 (180-223)||(8882276-8882320)
chr8 (155-198)||(18804519-18804563)
[»] chr5 (10 HSPs)
chr5 (157-238)||(430510-430593)
chr5 (155-236)||(2566213-2566296)
chr5 (163-236)||(32269915-32269990)
chr5 (156-236)||(23023502-23023584)
chr5 (157-208)||(25663179-25663231)
chr5 (163-236)||(15292143-15292218)
chr5 (164-200)||(12033346-12033383)
chr5 (155-238)||(13167026-13167111)
chr5 (160-208)||(35310359-35310408)
chr5 (160-236)||(38875552-38875627)
[»] chr1 (13 HSPs)
chr1 (155-235)||(24177630-24177712)
chr1 (155-238)||(34644472-34644557)
chr1 (155-236)||(21472909-21472992)
chr1 (155-236)||(22346801-22346884)
chr1 (155-208)||(5454001-5454055)
chr1 (155-223)||(30688463-30688533)
chr1 (155-236)||(868521-868602)
chr1 (157-200)||(1114023-1114067)
chr1 (142-208)||(4611082-4611149)
chr1 (185-235)||(7213187-7213238)
chr1 (155-236)||(28041245-28041328)
chr1 (155-208)||(2764385-2764439)
chr1 (155-208)||(28493478-28493532)
[»] chr2 (9 HSPs)
chr2 (155-236)||(4413184-4413267)
chr2 (155-236)||(9685533-9685616)
chr2 (161-236)||(13413263-13413340)
chr2 (157-236)||(17344546-17344627)
chr2 (155-236)||(41868026-41868108)
chr2 (155-234)||(18745074-18745155)
chr2 (156-238)||(27502269-27502353)
chr2 (155-208)||(11921351-11921405)
chr2 (155-208)||(28224906-28224960)
[»] scaffold0470 (1 HSPs)
scaffold0470 (140-236)||(7494-7591)
[»] scaffold1768 (1 HSPs)
scaffold1768 (161-235)||(303-379)
[»] scaffold0490 (1 HSPs)
scaffold0490 (193-236)||(6279-6323)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 18981892 - 18981649
Alignment:
Q  1 cttgttttgactccttcattcatgtgagtttctaaagactttgttattttgtctatataannnnnnnnccaaacaagttgatgagtttttatatcattaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||| |    
T  18981892 cttgttttgactcctttattcatgtgagtttctaaagactttgttattttgtctatataattttttttccaaacaagttaatgagtttttatatcattta 18981793  T
Q  101 tatatcaaagattaattacacatggaagaaggcaaacatgtaacaagctgttttgctagacctttttggatggcaaaccaatcatcgtaaacacaacatt 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  ||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  18981792 tatatcaaagattaattacacatgaaagaaggcaaacatgtaacaagcttctttcccagaccattttggatggcaaaccaatcatcgtaaacacaacatt 18981693  T
Q  201 catggacccagagacatgacattactatgcatgaccctatgata 244  Q
    |||||||| ||||||||||||||||||||||||||||| |||||    
T  18981692 catggacctagagacatgacattactatgcatgaccctttgata 18981649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 3329902 - 3329987
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | ||||||| ||||| |||||||| |||||    
T  3329902 gctagacctttttggatggcaaaaccaatcatcgtaaacacagcattcatggacctaggagacataacattgctatgcataaccct 3329987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 4419177 - 4419254
Alignment:
Q  163 tttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |||||  ||||||| |||||    
T  4419177 tttttggatggcaaaaccaatcatcgtaaacacaacattcatggacctaggagacataacattgttatgcataaccct 4419254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 53619492 - 53619577
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc-cagagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||  |||||||| |||||  ||||||| |||||    
T  53619492 gctagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaagagacataacattgttatgcataaccct 53619577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 25504206 - 25504284
Alignment:
Q  160 acctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||| ||||||||  ||||| || ||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  25504206 acctttttgaatggcaaaagcaatcctcataaacacaatattcatggacctatgagacatgacattactatgcatgacc 25504284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 39001303 - 39001357
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  39001303 gctagacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 39001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 16955373 - 16955449
Alignment:
Q  162 ctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||| |||||| ||| ||||| ||||||||||||||||||||| || | ||||||||||||| ||||||||||||    
T  16955373 cttttttgatggccaaatcaatcctcgtaaacacaacattcatgggcctaggagacatgacattgctatgcatgacc 16955449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 48657115 - 48657037
Alignment:
Q  156 ctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcat 232  Q
    ||||| ||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||| ||||| ||||||||    
T  48657115 ctagatctttttggacggcaaaatcaatcatcgtaaacacaacattcatagacctatgagacataacattgctatgcat 48657037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 55933661 - 55933607
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggacc 208  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||| |||||    
T  55933661 gctagacttttttggatggcaaaatcaatcatcgtaaacacaacattcacggacc 55933607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 238
Target Start/End: Original strand, 26521339 - 26521479
Alignment:
Q  100 atatatcaaagattaattacacatgga-agaaggcaaacatgtaacaagctgttttgctagacctttttggatggcaaa-ccaatcatcgtaaacacaac 197  Q
    ||||||||| ||||| ||||||||||| ||||||||| |    || |||||||   |||| ||||||||||||| |||| |||||| |||||||||||||    
T  26521339 atatatcaaggattacttacacatggatagaaggcaagcggacaaaaagctgtgccgctaaacctttttggatgacaaaaccaatcctcgtaaacacaac 26521438  T
Q  198 attcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    | |||||| || | || |||||||||| ||| ||||||||||    
T  26521439 a-tcatgggcctaggatacatgacattgctacgcatgaccct 26521479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 50001127 - 50001042
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    |||||| ||||||||||||||||  ||||| |||||||||||||||| ||||| | | ||||||| ||||| |||||||| |||||    
T  50001127 gctagatctttttggatggcaaaatcaatcttcgtaaacacaacatttatggatctaggagacataacattgctatgcataaccct 50001042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 38535760 - 38535688
Alignment:
Q  164 ttttggatggcaaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgac 235  Q
    |||||||||  |||| |||| ||||||||||||||| |||||||| |  |||||||||||| |||||||||||    
T  38535760 ttttggatgcaaaactaatcctcgtaaacacaacatccatggacctataagacatgacattgctatgcatgac 38535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 31847009 - 31847063
Alignment:
Q  155 gctagacctttttggatggca-aaccaatcatcgtaaacacaacattcatggacc 208  Q
    ||||||||||||||||||||| ||| |||| |||  |||||||||||||||||||    
T  31847009 gctagacctttttggatggcataacgaatcctcgctaacacaacattcatggacc 31847063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 600885 - 600824
Alignment:
Q  163 tttttggatggcaaacc-aatcatcgtaaacacaacattcatggaccca-gagacatgacat 222  Q
    ||||||||||||||| | |||||||||||||||| |||| ||||||| | ||||||||||||    
T  600885 tttttggatggcaaaactaatcatcgtaaacacagcattaatggacctaggagacatgacat 600824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 23242831 - 23242891
Alignment:
Q  179 caatcatcgtaaacacaacattcatggacc-cagagacatgacattactatgcatgaccct 238  Q
    |||||||||||||||||| ||| |||||||  ||||| ||||||||  |||||||||||||    
T  23242831 caatcatcgtaaacacaatatttatggacctaagagaaatgacattgttatgcatgaccct 23242891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 30940946 - 30940850
Alignment:
Q  142 aacaagctgttttgctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||  | |||||||||||||||||||| ||| ||||| || | |||||||||||||| |||| | || | ||||||||  |||||||||||    
T  30940946 aacaagctgcgtcgctagacctttttggatggcaaaatcaatcctcatgaacacaacattcatagacctaggatatatgacattgttatgcatgacc 30940850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 982827 - 982938
Alignment:
Q  127 agaaggcaaacatgtaacaagctgttttgctagacctttttggatggcaa-accaatcatcgtaaacacaacattcatggacccag-agacatgacatta 224  Q
    |||||||||||| | |||||||||| | |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||  || ||||||||||||     
T  982827 agaaggcaaacaggcaacaagctgtgtcgctagacctttttggatggcaataccaatcctcgtgaacacaacattcatggacatagaagacatgacattg 982926  T
Q  225 ctatgcatgacc 236  Q
     |||||||||||    
T  982927 atatgcatgacc 982938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 48539094 - 48539170
Alignment:
Q  162 ctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  48539094 ctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgacc 48539170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 28517501 - 28517435
Alignment:
Q  142 aacaagctgttttgctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggac 207  Q
    |||||||||| | ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  28517501 aacaagctgtgtcgctagacttttttggatggcaaaaccaatcctcgtaaacacaacattcatggac 28517435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 21327037 - 21326956
Alignment:
Q  157 tagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||||  ||||| |||| ||||||||||||||||||| | ||||||| ||||| ||||||||||||    
T  21327037 tagacctttttggatggcaaaatcaatcctcgtgaacacaacattcatggacctaggagacataacattgctatgcatgacc 21326956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 45003098 - 45003019
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcat 232  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||| || | ||||||| ||||| ||||||||    
T  45003098 gctagacctttttggatggcaaaatcaatcttcgtaaacacaacattcatggtcctatgagacataacattgctatgcat 45003019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 19277197 - 19277282
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgta--aacacaacattcatggacccag-agacatgacattactatgcatgacc 236  Q
    ||||||||||||||||||||||| |||||  ||||   ||||||||||||||||||| || |||||||||||| ||||||||||||    
T  19277197 gctagacctttttggatggcaaaaccaattttcgtgtgaacacaacattcatggacctaggagacatgacattgctatgcatgacc 19277282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 45614043 - 45613989
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  45614043 gctagaccttttcggatggcaaaaccaatcctcgtaaacacaacattcatggacc 45613989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 24527495 - 24527578
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||| ||||||||||| |||| |||||| |||| || |||||||||||||||| | |||| |||||||| ||||||||||||    
T  24527495 gctagatctttttggatgacaaaaccaatcctcgtgaatacaacattcatggaccaaggagaaatgacattgctatgcatgacc 24527578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 4501164 - 4501246
Alignment:
Q  154 tgctagacctttttggatggcaaacc-aatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatga 234  Q
    |||||||||||||| |||| |||| | |||| |||||||||||||||||||| | | | ||||||||||||| ||||||||||    
T  4501164 tgctagacctttttagatgacaaagctaatcctcgtaaacacaacattcatgaatctaggagacatgacattgctatgcatga 4501246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 5825182 - 5825264
Alignment:
Q  158 agacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    |||||||||| ||||||||| |||||| ||||||||||||||| ||| |||| | ||||||| ||||| |||||||| |||||    
T  5825182 agacctttttcgatggcaaaaccaatcctcgtaaacacaacatccatagacctaggagacataacattgctatgcataaccct 5825264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 27027831 - 27027761
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacatt 223  Q
    |||||| |||||||||| ||||| |||||| |||| ||||||||||||||||||| | |||||||||||||    
T  27027831 gctagatctttttggatagcaaaaccaatcctcgtgaacacaacattcatggacctaggagacatgacatt 27027761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 41117963 - 41117890
Alignment:
Q  163 tttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatga 234  Q
    ||||||||| |||||  |||||||||| ||||||||||||||||||| | || |||||||||| ||||||||||    
T  41117963 tttttggatagcaaaatcaatcatcgtgaacacaacattcatggacctaggaaacatgacattgctatgcatga 41117890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 38839234 - 38839286
Alignment:
Q  157 tagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  38839234 tagacatttttggatggtaaaaccaatcttcgtaaacacaacattcatggacc 38839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 5972410 - 5972335
Alignment:
Q  162 ctttttggatggcaaacc-aatcatcgtaaacacaacattcatgga-cccagagacatgacattactatgcatgac 235  Q
    |||||||||||||||| | |||| ||||||||||||||||||| || |   |||| ||||||||||||||||||||    
T  5972410 ctttttggatggcaaaactaatcctcgtaaacacaacattcatagatctgggagaaatgacattactatgcatgac 5972335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 34772696 - 34772770
Alignment:
Q  163 tttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacccag-agacatgacattactatgcatgac 235  Q
    |||||| |||||||| ||||| ||||||||||||| ||||||||||| || | ||||||||||  ||||||||||    
T  34772696 tttttgaatggcaaaaccaattatcgtaaacacaatattcatggacctagaaaacatgacattgatatgcatgac 34772770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 2904291 - 2904340
Alignment:
Q  160 acctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||| ||||    
T  2904291 acctttttggatagcaaaaccaattatcgtaaacacaacattcatagacc 2904340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 42295364 - 42295304
Alignment:
Q  175 aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatga 234  Q
    |||| ||||||||||||||||| ||||||||||| | ||||||||||| |  |||||||||    
T  42295364 aaactaatcatcgtaaacacaagattcatggacctaggagacatgacaatgttatgcatga 42295304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 32546701 - 32546783
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgac 235  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  32546701 gctagacctttttggatggcaaaaccaatcctcgtgaacacaacattcatggacctaggagacatgacattactatgcatgac 32546783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 39583430 - 39583345
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggacccag-agacatgacattactatgcatgaccct 238  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||||| ||| || |||||||||||| ||||||||||||||    
T  39583430 gctagacctttttggatggcaaaatcaatcctcgtaaacacgacattcatgaacctaggagacatgacattgctatgcatgaccct 39583345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 53785619 - 53785698
Alignment:
Q  159 gacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||| |||||||||||| |||||| ||||||||| |||||||||||||| | ||||||||||||| ||||||||||||    
T  53785619 gaccttgttggatggcaaaaccaatcctcgtaaacataacattcatggacctaggagacatgacattgctatgcatgacc 53785698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 4763987 - 4763915
Alignment:
Q  161 cctttttggatggcaaacc-aatcatcgtaaacacaacattcatggacccagagacatgacattactatgcat 232  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  4763987 cctttttggatggcaattctaatcctcgtaaacacaacattcatggaccaggagacatgacattgctatgcat 4763915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 44198660 - 44198752
Alignment:
Q  142 aacaagctgttttgctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcat 232  Q
    |||||||||| | |||  ||||||||||||||||||  |||| |||| |||||||||||||||||||| | ||||||||||||| ||||||||    
T  44198660 aacaagctgtgtcgctcaacctttttggatggcaaaatcaattatcgcaaacacaacattcatggacctaggagacatgacattgctatgcat 44198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 13582416 - 13582499
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||| |||||||||||||| ||| ||||| ||||||||||||||||||||| || | |||||||||||||  |||||||||||    
T  13582416 gctaggcctttttggatggctaaatcaatcttcgtaaacacaacattcatggtcctaggagacatgacattgttatgcatgacc 13582499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 26772664 - 26772743
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcat 232  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||||| | ||||||| |||||  |||||||    
T  26772664 gctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggacctaggagacataacattgttatgcat 26772743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 38145987 - 38146047
Alignment:
Q  179 caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||  |||||||||||||    
T  38145987 caatcatcgtaaacacaacgttcatggacctaggagacatgacattgttatgcatgaccct 38146047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 38671081 - 38671002
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcat 232  Q
    ||||||| ||||| ||||||||| |||||| ||||| |||||||||||||||||| | ||||||| ||||| ||||||||    
T  38671081 gctagacttttttagatggcaaaaccaatcctcgtacacacaacattcatggacctaggagacataacattgctatgcat 38671002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 4669839 - 4669794
Alignment:
Q  179 caatcatcgtaaacacaacattcatggaccca-gagacatgacatt 223  Q
    |||||||||||||||||||||||||||||| | |||||||||||||    
T  4669839 caatcatcgtaaacacaacattcatggaccaaggagacatgacatt 4669794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 26856963 - 26856878
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacccag-agacatgacattactatgcatgaccct 238  Q
    ||||| ||||||||||||| ||| |||||| ||| || ||||||||||||  ||| || |||||||||||| ||||||||||||||    
T  26856963 gctaggcctttttggatggtaaaaccaatcctcgcaagcacaacattcataaacctaggagacatgacattgctatgcatgaccct 26856878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 5338552 - 5338599
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattc 201  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||    
T  5338552 gctagaccattttggatggcaaaaccaatcctcgtaaacacaacattc 5338599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 37133200 - 37133117
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||||||| || ||||||||| |  ||||||||||||||||  ||  | ||||||||||||| ||||||||||||    
T  37133200 gctagacctttttggatcgcaaaaccaatccttataaacacaacattcattaacttaggagacatgacattgctatgcatgacc 37133117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 3443506 - 3443464
Alignment:
Q  162 ctttttggatggcaaa-ccaatcatcgtaaacacaacattcat 203  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  3443506 ctttgtggatggcaaaaccaatcatcgtaaacacaacattcat 3443464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 26276521 - 26276575
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggacc 208  Q
    |||||| ||||||||||||||||  ||||| || |||||||||||||||||||||    
T  26276521 gctagatctttttggatggcaaaatcaatcctcataaacacaacattcatggacc 26276575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 44739 - 44825
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaac---acaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| |||| |||| | || |||   |||||||||||||||| | || |||||||||| ||||||||||||    
T  44739 gctagacctttttggatggcaaaacaaatccttgtgaacacaacaacattcatggacctaggaaacatgacattgctatgcatgacc 44825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 37992260 - 37992324
Alignment:
Q  175 aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||| ||| |||||||||||||||| ||  | ||| |||||||||||| |||||||||||    
T  37992260 aaaccaatcttcgaaaacacaacattcatgcacgtacgagtcatgacattactgtgcatgaccct 37992324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 3137442 - 3137363
Alignment:
Q  161 cctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  3137442 cctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccct 3137363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 32115624 - 32115707
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||| ||| |||||  |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||    
T  32115624 gctagacctttttagatagcaaaatcaatcatcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgacc 32115707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 7749387 - 7749441
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  7749387 gctagaccttttaggatggcaaaaccaatcctcgtaaacacaacattcatggacc 7749441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 17249506 - 17249456
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatg 204  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  17249506 gctagacctttttggatggcaaaaccaatcctcgtaaacacaacattcatg 17249456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 33220912 - 33220827
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacccag-agacatgacattactatgcatgaccct 238  Q
    |||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||| || |||||  ||||| |||||||| |||||    
T  33220912 gctagaccttttaggatggcaaaaccaattatcgtaaacgcaacattcatggacctagaagacacaacattgctatgcataaccct 33220827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 959512 - 959570
Alignment:
Q  179 caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||| |||||||||||||||||||||||| | ||||||  ||||| ||||||||||||    
T  959512 caatcctcgtaaacacaacattcatggacctaggagacacaacattgctatgcatgacc 959570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 103012 - 103095
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||| ||||||  |||||||||||    
T  103012 gctagacctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacacgacattgttatgcatgacc 103095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 22589537 - 22589454
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||||||| |||| | ||||||||||||| ||||||||||||    
T  22589537 gctagacctttttggatggcaaaaccaatcctcgtgaacacaacattcatagacctatgagacatgacattgctatgcatgacc 22589454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 38815206 - 38815285
Alignment:
Q  161 cctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  38815206 cctttttggatggaaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccct 38815285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 24451036 - 24451105
Alignment:
Q  164 ttttggatggcaaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcat 232  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||    
T  24451036 ttttggatggcaaaacaatcatcgtgaacacaacattcatggacctaggagacatgacattgctatgcat 24451105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 3187878 - 3187961
Alignment:
Q  157 tagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||||| | ||||||| ||||| |||||||| |||||    
T  3187878 tagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgctatgcataaccct 3187961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 39434573 - 39434658
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatgga-cccagagacatgacattactatgcatgaccct 238  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||| |  |||||||| |||||  ||||||| |||||    
T  39434573 gctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggatctaagagacattacattgatatgcataaccct 39434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 6592482 - 6592564
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||| |||||| |||| |||||  |||||||||||||||||||| ||| | |||||||||||||| |||||||||||    
T  6592482 gctagacctttctggatgacaaaaccaatactcgtaaacacaacattcatgaacctatgagacatgacatta-tatgcatgacc 6592564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 6618176 - 6618273
Alignment:
Q  140 gtaacaagctgttttgctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||   | |||| ||||||||||| |||| |||||  ||||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  6618176 gtaacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagacatgacatta-tatgcatgacc 6618273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 24124967 - 24125017
Alignment:
Q  187 gtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  24124967 gtaaacacaacattcatggacctatgagacatgacattgctatgcatgacc 24125017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 24320191 - 24320293
Alignment:
Q  104 atcaaagattaattacacatgga-agaaggcaaacatgtaacaagctgttttgctagacctttttggatggcaaac-caatcatcgtaaacacaacattc 201  Q
    ||||| ||||||||||||| | | ||||| |||||| | |||||||||   ||||||||||||||||||  ||||  ||||| |||||||||||||||||    
T  24320191 atcaatgattaattacacacgaatagaagacaaacaggcaacaagctgcactgctagacctttttggatatcaaaatcaatcctcgtaaacacaacattc 24320290  T
Q  202 atg 204  Q
    |||    
T  24320291 atg 24320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 4699783 - 4699831
Alignment:
Q  161 cctttttggatggcaaacc-aatcatcgtaaacacaacattcatggacc 208  Q
    ||||||||||||||||| | |||| | ||||||||||||||||||||||    
T  4699783 cctttttggatggcaaaactaatccttgtaaacacaacattcatggacc 4699831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 8882276 - 8882320
Alignment:
Q  180 aatcatcgtaaacacaacattcatggaccca-gagacatgacatt 223  Q
    |||| |||||||||||||||||||||||| | |||||||||||||    
T  8882276 aatcctcgtaaacacaacattcatggacctaggagacatgacatt 8882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 18804519 - 18804563
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaaca 198  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  18804519 gctagacctttttggatggcaaaaccaatcctcgtaaacaaaaca 18804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 430510 - 430593
Alignment:
Q  157 tagacctttttggatggca-aaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||||| | ||||||| |||||||||||||| |||||    
T  430510 tagacctttttggatggcataatcaatcctcgtaaacacaacattcatggacctaggagacataacattactatgcataaccct 430593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 2566296 - 2566213
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| | | ||||||||||||| ||||||||||||    
T  2566296 gctagacctttttggatggcaaaatcaatcctcgtaaacacaacattgatggatctaggagacatgacattgctatgcatgacc 2566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 32269990 - 32269915
Alignment:
Q  163 tttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  32269990 tttttggatggcgaaatcaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgacc 32269915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 23023502 - 23023584
Alignment:
Q  156 ctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||| |||||||||||| ||||  ||||| ||||||||||||||||||| |||| | |||||||||||||  |||||||||||    
T  23023502 ctaggcctttttggatgacaaaatcaatcttcgtaaacacaacattcatcgacctaggagacatgacattgatatgcatgacc 23023584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 25663231 - 25663179
Alignment:
Q  157 tagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||||||| |||| |||||| |||||||| |||||||||||||||    
T  25663231 tagacctttttggatgacaaagccaatcctcgtaaactcaacattcatggacc 25663179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 15292218 - 15292143
Alignment:
Q  163 tttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||  ||||| || ||||||||||||||||||||| | ||||  ||||||| ||||||||||||    
T  15292218 tttttggatggcaaaatcaatcctcataaacacaacattcatggacctaggagatgtgacattgctatgcatgacc 15292143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 12033346 - 12033383
Alignment:
Q  164 ttttggatggcaaa-ccaatcatcgtaaacacaacatt 200  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12033346 ttttggatggcaaaaccaatcatcgtaaacacaacatt 12033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 13167111 - 13167026
Alignment:
Q  155 gctagacctttttggatggca-aaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    |||||| ||||||||||  || || |||||||||||||| ||||||||||||||| | |||||||  |||| |||||||| |||||    
T  13167111 gctagatctttttggataacagaatcaatcatcgtaaacccaacattcatggacctaggagacataccattgctatgcataaccct 13167026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 35310359 - 35310408
Alignment:
Q  160 acctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||| ||||||||||||| |||||  ||||||||||||||||||||||||    
T  35310359 acctctttggatggcaaaaccaattctcgtaaacacaacattcatggacc 35310408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 38875552 - 38875627
Alignment:
Q  160 acctttttggatggcaaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||| |||| ||||||||||||||||||||| |||| |||| | |||||| ||||||  |||||||||||    
T  38875552 acctttttggatcgcaa-ccaatcatcgtaaacacaaca-tcattgacctaggagacaagacattgttatgcatgacc 38875627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 24177712 - 24177630
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgac 235  Q
    ||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||| | |||| |||||||| |||||||||||    
T  24177712 gctagacctttttggttggcaaaaccaatcctcgtgaacacaacattcatggacctaggagatatgacattgctatgcatgac 24177630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 34644472 - 34644557
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||||||| | ||||||| |||||  ||||||| |||||    
T  34644472 gctagacttttttggatggcaaaatcaatcatcgtaaacacaacattcatggacctaggagacataacattgatatgcataaccct 34644557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 21472909 - 21472992
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| |||||| || || | ||| ||||||||||||||| | ||||||||||||| ||||||||||||    
T  21472909 gctagacctttttggatggcaaaaccagtcctcctgaacgcaacattcatggacctaggagacatgacattgctatgcatgacc 21472992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 22346801 - 22346884
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| |||| |||| |||| ||||||||||||||  ||| | ||||||||||||| ||||||||||||    
T  22346801 gctagacctttttggatggcaaaactaatcctcgtgaacacaacattcataaacctaggagacatgacatttctatgcatgacc 22346884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 5454001 - 5454055
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||||||||| |||| |||||| | ||||||||||||||||||||||    
T  5454001 gctagacctttttggatgacaaaaccaatccttgtaaacacaacattcatggacc 5454055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 30688463 - 30688533
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacatt 223  Q
    ||||| |||||||||||  |||| |||||| |||||||||||||||||||||||||| ||| |||||||||    
T  30688463 gctaggcctttttggataacaaaaccaatcctcgtaaacacaacattcatggacccaggagtcatgacatt 30688533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 868602 - 868521
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| ||||||||| | || ||||||  ||||||||||  | ||||||||||||| ||||||||||||    
T  868602 gctagacctttttggatggcaaaaccaatccttgtgaacaca--attcatggacttaggagacatgacattgctatgcatgacc 868521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 1114067 - 1114023
Alignment:
Q  157 tagacctttttggatggcaaa-ccaatcatcgtaaacacaacatt 200  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  1114067 tagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 1114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 4611082 - 4611149
Alignment:
Q  142 aacaagctgttttgctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggacc 208  Q
    ||||||||||  || |||||||||||||||| ||||  |||||||||| ||||||| |||||||||||    
T  4611082 aacaagctgtgctgttagacctttttggatgacaaaatcaatcatcgtgaacacaatattcatggacc 4611149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 7213187 - 7213238
Alignment:
Q  185 tcgtaaacacaacattcatggacccag-agacatgacattactatgcatgac 235  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||||    
T  7213187 tcgtgaacacaacattcatggacctagaagacatgacattattatgcatgac 7213238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 28041328 - 28041245
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggacccagag-acatgacattactatgcatgacc 236  Q
    ||||||||||||||||||| |||  ||||| || | | ||||||||||||||||  |||| |||||||||| ||||||||||||    
T  28041328 gctagacctttttggatggaaaaatcaatcctcatgagcacaacattcatggacttagaggacatgacattgctatgcatgacc 28041245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 2764385 - 2764439
Alignment:
Q  155 gctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggacc 208  Q
    |||| |||||||||||||| |||  |||||||||||||||||||||| |||||||    
T  2764385 gctaaacctttttggatggtaaaatcaatcatcgtaaacacaacatttatggacc 2764439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 28493532 - 28493478
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||||||||||| ||| ||||| |||| |||| ||||||||||||||    
T  28493532 gctagacctttttggatggcaaaatcaatcctcgtgaacataacattcatggacc 28493478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 4413267 - 4413184
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| ||| ||||| || | ||||||||||||||||||| | |||||||||| || ||||||||||||    
T  4413267 gctagacctttttggatggcaaaatcaatcctcatgaacacaacattcatggacctaggagacatgactttgctatgcatgacc 4413184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 9685616 - 9685533
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    |||||||||||||||||||| ||| ||||| | || ||||||||||||||||||| | ||||||||||||| |||| |||||||    
T  9685616 gctagacctttttggatggcaaaaacaatctttgtgaacacaacattcatggacctaggagacatgacattgctatccatgacc 9685533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 13413263 - 13413340
Alignment:
Q  161 cctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||||||| |||||  || ||||||||||||||||||||| | |||||||||||||  |||||||||||    
T  13413263 cctttttggatggcaaaaccaattctcataaacacaacattcatggacctaggagacatgacattgttatgcatgacc 13413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 17344546 - 17344627
Alignment:
Q  157 tagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||||| | |||  ||||| |||||||||||||||||||||||| | |||||||||||||  |||||||||||    
T  17344546 tagacctttttggatcgaaaaatcaatcctcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgacc 17344627  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 41868108 - 41868026
Alignment:
Q  155 gctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggacc-cagagacatgacattactatgcatgacc 236  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||||||||   |||||||||||||  |||||||||||    
T  41868108 gctagatctttttgg-tggcaaaaccaatcctcgtaaacacaacattcatggacctgggagacatgacattgttatgcatgacc 41868026  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 18745155 - 18745074
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatga 234  Q
    |||||||||||||||||||| ||||||||| |  |||||||||||||||| |||| | || | |||||||| ||||||||||    
T  18745155 gctagacctttttggatggcaaaaccaatccttataaacacaacattcatagacctaggaaatatgacattgctatgcatga 18745074  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 27502269 - 27502353
Alignment:
Q  156 ctagacctttttggatggcaaac-caatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgaccct 238  Q
    |||||||||||||||| |||||  ||||| ||||||||||||||||||| || | | ||||||||| ||| |||||||| |||||    
T  27502269 ctagacctttttggattgcaaaatcaatcttcgtaaacacaacattcatagatctaggagacatgatattgctatgcataaccct 27502353  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 11921405 - 11921351
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||| ||||||||||||| |||| |||| | ||||||||||||||||||||||    
T  11921405 gctagatctttttggatggcgaaactaatcctagtaaacacaacattcatggacc 11921351  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 28224906 - 28224960
Alignment:
Q  155 gctagacctttttggatggc-aaaccaatcatcgtaaacacaacattcatggacc 208  Q
    |||||||||||||||||||| |||| |||| || |||||||||||||||| ||||    
T  28224906 gctagacctttttggatggcaaaacaaatcttcataaacacaacattcattgacc 28224960  T

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Target: scaffold0470 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 7494 - 7591
Alignment:
Q  140 gtaacaagctgttttgctagacctttttggatggcaaa-ccaatcatcgtaaacacaacattcatggaccca-gagacatgacattactatgcatgacc 236  Q
    ||||||||||||   | |||| ||||||||||| |||| |||||  ||||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  7494 gtaacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagacatgacatta-tatgcatgacc 7591  T

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Target: scaffold1768 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 379 - 303
Alignment:
Q  161 cctttttggatggcaaacc-aatcatcgtaaacacaacattcatggacccag-agacatgacattactatgcatgac 235  Q
    ||||||||||||||||| | |||| ||||||||||||| ||||| || | || |||||||||||| ||||| |||||    
T  379 cctttttggatggcaaaactaatcctcgtaaacacaacgttcatcgatctaggagacatgacattgctatgtatgac 303  T

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Target: scaffold0490 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 6279 - 6323
Alignment:
Q  193 acaacattcatggacccag-agacatgacattactatgcatgacc 236  Q
    |||||||||||||||| || |||||||||||| ||||||||||||    
T  6279 acaacattcatggacctaggagacatgacattgctatgcatgacc 6323  T

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