View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1311_low_13 (Length: 354)

Name: NF1311_low_13
Description: NF1311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1311_low_13
NF1311_low_13
[»] chr3 (35 HSPs)
chr3 (47-325)||(10211512-10211788)
chr3 (47-325)||(10209292-10209568)
chr3 (47-325)||(4598299-4598574)
chr3 (47-325)||(4600520-4600795)
chr3 (47-325)||(10056336-10056612)
chr3 (47-325)||(10058558-10058834)
chr3 (47-325)||(10060780-10061056)
chr3 (47-325)||(10063002-10063278)
chr3 (47-325)||(10065224-10065500)
chr3 (47-313)||(10067435-10067699)
chr3 (47-325)||(3617567-3617842)
chr3 (47-325)||(25637544-25637822)
chr3 (77-325)||(45283103-45283345)
chr3 (100-325)||(54635241-54635462)
chr3 (77-325)||(6716616-6716859)
chr3 (82-317)||(7779821-7780047)
chr3 (170-325)||(801209-801355)
chr3 (154-317)||(23200022-23200181)
chr3 (153-317)||(23197822-23197982)
chr3 (270-317)||(7762390-7762437)
chr3 (270-317)||(9581407-9581454)
chr3 (261-317)||(43401788-43401844)
chr3 (262-317)||(9636114-9636169)
chr3 (270-317)||(19683885-19683932)
chr3 (270-317)||(37408583-37408630)
chr3 (270-317)||(45095288-45095335)
chr3 (267-317)||(43403737-43403787)
chr3 (261-317)||(49199456-49199512)
chr3 (270-317)||(5258140-5258187)
chr3 (270-317)||(7764589-7764636)
chr3 (270-317)||(34491337-34491383)
chr3 (270-317)||(5260319-5260366)
chr3 (279-317)||(4570077-4570115)
chr3 (277-317)||(6095603-6095642)
chr3 (261-317)||(40913418-40913473)
[»] chr8 (18 HSPs)
chr8 (47-325)||(15290641-15290917)
chr8 (47-325)||(15471010-15471286)
chr8 (47-325)||(42575100-42575375)
chr8 (77-325)||(25690071-25690313)
chr8 (77-325)||(3439620-3439861)
chr8 (172-317)||(2627861-2628002)
chr8 (172-317)||(42498319-42498459)
chr8 (270-317)||(17982778-17982825)
chr8 (270-317)||(31218382-31218429)
chr8 (270-317)||(34254327-34254374)
chr8 (270-317)||(34256503-34256550)
chr8 (271-317)||(1746216-1746262)
chr8 (270-317)||(19945355-19945402)
chr8 (270-317)||(44303980-44304027)
chr8 (277-317)||(42434995-42435034)
chr8 (178-215)||(32902096-32902133)
chr8 (277-317)||(11384110-11384149)
chr8 (277-317)||(18655525-18655564)
[»] chr6 (30 HSPs)
chr6 (47-325)||(13154032-13154308)
chr6 (47-325)||(33341878-33342156)
chr6 (47-325)||(25421423-25421698)
chr6 (47-325)||(34164975-34165251)
chr6 (44-325)||(34167197-34167475)
chr6 (47-325)||(6027364-6027638)
chr6 (77-321)||(16578327-16578565)
chr6 (77-321)||(16616815-16617053)
chr6 (77-321)||(16653233-16653471)
chr6 (77-321)||(16554990-16555228)
chr6 (77-321)||(16631546-16631784)
chr6 (47-185)||(6136079-6136216)
chr6 (47-160)||(13159051-13159164)
chr6 (77-325)||(27647977-27648210)
chr6 (172-317)||(412227-412369)
chr6 (181-317)||(3072670-3072802)
chr6 (170-317)||(6097349-6097494)
chr6 (262-317)||(2171520-2171575)
chr6 (270-317)||(16452325-16452372)
chr6 (277-317)||(30834539-30834579)
chr6 (270-317)||(5406196-5406243)
chr6 (270-317)||(5410521-5410568)
chr6 (270-317)||(31404671-31404718)
chr6 (281-317)||(5409076-5409112)
chr6 (281-317)||(5413401-5413437)
chr6 (267-317)||(3808701-3808751)
chr6 (277-317)||(17763115-17763155)
chr6 (277-317)||(21589056-21589095)
chr6 (277-317)||(21593789-21593828)
chr6 (270-317)||(33160348-33160395)
[»] chr7 (25 HSPs)
chr7 (47-325)||(6594334-6594609)
chr7 (47-325)||(6592116-6592391)
chr7 (46-325)||(32060097-32060373)
chr7 (46-325)||(18388535-18388811)
chr7 (47-325)||(18391972-18392247)
chr7 (44-325)||(1560438-1560717)
chr7 (77-325)||(20344014-20344255)
chr7 (154-317)||(39731494-39731654)
chr7 (206-317)||(24789966-24790074)
chr7 (104-317)||(43503991-43504197)
chr7 (262-317)||(35854039-35854094)
chr7 (104-210)||(24790230-24790333)
chr7 (270-317)||(23555165-23555212)
chr7 (262-317)||(25766948-25767003)
chr7 (270-317)||(29991178-29991225)
chr7 (270-317)||(34310712-34310759)
chr7 (270-317)||(25615978-25616025)
chr7 (262-317)||(48408929-48408984)
chr7 (261-317)||(2390407-2390462)
chr7 (277-317)||(22270098-22270137)
chr7 (277-317)||(32358058-32358097)
chr7 (270-317)||(19502303-19502350)
chr7 (277-317)||(3259120-3259159)
chr7 (270-326)||(4178889-4178945)
chr7 (277-317)||(8359319-8359359)
[»] chr4 (20 HSPs)
chr4 (46-325)||(5138407-5138685)
chr4 (47-325)||(5136182-5136459)
chr4 (47-325)||(8395720-8395996)
chr4 (47-325)||(8393511-8393787)
chr4 (47-325)||(7125019-7125294)
chr4 (47-325)||(7122800-7123075)
chr4 (154-317)||(31495191-31495359)
chr4 (270-317)||(56178633-56178680)
chr4 (261-317)||(2209839-2209895)
chr4 (277-317)||(29999809-29999849)
chr4 (270-317)||(5370079-5370126)
chr4 (270-317)||(13992289-13992336)
chr4 (270-317)||(48143168-48143215)
chr4 (261-314)||(50262688-50262741)
chr4 (272-317)||(52095361-52095405)
chr4 (277-317)||(41964541-41964580)
chr4 (270-317)||(52082660-52082707)
chr4 (277-317)||(8648264-8648303)
chr4 (277-317)||(41639551-41639590)
chr4 (277-317)||(50673851-50673890)
[»] chr5 (26 HSPs)
chr5 (47-321)||(40380212-40380483)
chr5 (46-321)||(40382423-40382695)
chr5 (47-325)||(16544526-16544804)
chr5 (47-325)||(25078238-25078513)
chr5 (47-325)||(25136207-25136482)
chr5 (47-325)||(16546748-16547026)
chr5 (46-325)||(10593375-10593651)
chr5 (75-325)||(22536101-22536341)
chr5 (78-325)||(29750969-29751211)
chr5 (79-325)||(29720481-29720721)
chr5 (79-325)||(29722641-29722881)
chr5 (82-317)||(9789042-9789267)
chr5 (154-317)||(16409600-16409762)
chr5 (82-317)||(18441462-18441691)
chr5 (172-317)||(26178007-26178150)
chr5 (219-317)||(26170887-26170983)
chr5 (270-317)||(37439266-37439313)
chr5 (270-317)||(13343185-13343232)
chr5 (270-317)||(25412885-25412932)
chr5 (272-317)||(13239876-13239921)
chr5 (277-317)||(213590-213630)
chr5 (270-317)||(30182713-30182760)
chr5 (270-317)||(36074039-36074086)
chr5 (272-317)||(28278441-28278485)
chr5 (277-317)||(40147386-40147425)
chr5 (277-317)||(5058170-5058209)
[»] chr1 (22 HSPs)
chr1 (43-325)||(44203749-44204028)
chr1 (77-325)||(9036533-9036775)
chr1 (78-325)||(21054075-21054314)
chr1 (78-325)||(9987318-9987558)
chr1 (104-325)||(40282494-40282711)
chr1 (104-325)||(20622072-20622288)
chr1 (154-317)||(51765522-51765682)
chr1 (270-317)||(8550783-8550830)
chr1 (270-317)||(13316348-13316395)
chr1 (261-317)||(42297962-42298018)
chr1 (270-317)||(3189455-3189502)
chr1 (270-317)||(3198272-3198319)
chr1 (270-317)||(3207111-3207158)
chr1 (270-317)||(20762797-20762844)
chr1 (277-317)||(29136372-29136412)
chr1 (277-317)||(13547093-13547132)
chr1 (277-317)||(13549004-13549043)
chr1 (277-317)||(37168423-37168462)
chr1 (277-317)||(11348823-11348862)
chr1 (277-317)||(28242429-28242469)
chr1 (261-317)||(37033059-37033115)
chr1 (277-317)||(47255343-47255383)
[»] chr2 (16 HSPs)
chr2 (47-325)||(12647162-12647437)
chr2 (47-325)||(13655805-13656083)
chr2 (104-325)||(6266808-6267023)
chr2 (154-317)||(32289689-32289851)
chr2 (154-317)||(30833471-30833631)
chr2 (154-317)||(4484213-4484373)
chr2 (155-317)||(36987961-36988119)
chr2 (270-317)||(4503129-4503176)
chr2 (270-317)||(45099879-45099926)
chr2 (270-314)||(36205661-36205705)
chr2 (270-317)||(2334414-2334461)
chr2 (270-317)||(6595002-6595049)
chr2 (270-317)||(5723252-5723299)
chr2 (277-317)||(35446888-35446927)
chr2 (277-317)||(45727054-45727093)
chr2 (277-317)||(1631736-1631775)
[»] scaffold0565 (1 HSPs)
scaffold0565 (47-325)||(2380-2655)
[»] scaffold0137 (1 HSPs)
scaffold0137 (47-325)||(6390-6667)
[»] scaffold0674 (1 HSPs)
scaffold0674 (91-317)||(3545-3769)
[»] scaffold1808 (1 HSPs)
scaffold1808 (91-306)||(1-214)
[»] scaffold0491 (2 HSPs)
scaffold0491 (154-317)||(11044-11204)
scaffold0491 (154-317)||(8618-8778)
[»] scaffold0286 (1 HSPs)
scaffold0286 (262-317)||(11682-11737)
[»] scaffold1519 (1 HSPs)
scaffold1519 (270-317)||(1040-1087)
[»] scaffold0002 (1 HSPs)
scaffold0002 (272-317)||(434658-434703)
[»] scaffold0176 (1 HSPs)
scaffold0176 (277-317)||(18007-18047)
[»] scaffold0016 (1 HSPs)
scaffold0016 (270-317)||(114727-114774)
[»] scaffold0236 (1 HSPs)
scaffold0236 (279-317)||(10614-10651)


Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-137; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10211788 - 10211512
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10211788 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacagagaataatgatgtgtggagcgacggagagtggtaaccaccaatcaaagc 10211689  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||    
T  10211688 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaacaatcacaagataaacaaggagaggga 10211591  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10211590 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 10211512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10209568 - 10209292
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  10209568 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacagagaataatgatgtgtggagtgacggagagtggtaaccaccaatcaaagc 10209469  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||    
T  10209468 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaacaatcacaagataaacaaggagaggga 10209371  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10209370 agatgaaaacaataaacacaaagagattggtcacccagtttggtccaaacttgacctactctggaggagagtttgtact 10209292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 4598299 - 4598574
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4598299 tgttgtgaatccccgaacctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 4598397  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||    
T  4598398 ttattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaacaatcacaagataaacaaggagaggga 4598495  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4598496 agaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 4598574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 4600520 - 4600795
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4600520 tgttgtgaatccccgaacctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 4600618  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||  ||||| |||||||||||||||||||||||||| |||    
T  4600619 ttattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaatcaacaatcacaagataaacaaggagaggga 4600716  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4600717 agaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctagaggagagtttgtact 4600795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10056612 - 10056336
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10056612 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10056513  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  10056512 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 10056416  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056415 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 10056336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10058834 - 10058558
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10058834 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10058735  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  10058734 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 10058638  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058637 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 10058558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10061056 - 10060780
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10061056 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10060957  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  10060956 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 10060860  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060859 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 10060780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10063278 - 10063002
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10063278 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10063179  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  10063178 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 10063082  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10063081 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 10063002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 10065500 - 10065224
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10065500 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10065401  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  10065400 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 10065304  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10065303 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 10065224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 47 - 313
Target Start/End: Complemental strand, 10067699 - 10067435
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10067699 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10067600  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  10067599 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 10067503  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggagg 313  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10067502 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggagg 10067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 3617842 - 3617567
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  ||||||||  | ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||     
T  3617842 tgttgtgaatccccgagcctccaaggtc-ggatcgaaccacaccaatacaaataagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 3617744  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||    
T  3617743 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 3617646  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3617645 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 3617567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 25637822 - 25637544
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  25637822 tgttgtgaatccccggacctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 25637724  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagc-aacaatcacaagataaacaaggagatgg 245  Q
     ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  25637723 gtattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaaacaatcacaagataaacaaggagaggg 25637624  T
Q  246 aagatgaaaacaataaaca-caaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25637623 aagaagaaaacaa-aagcaccaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagattgtact 25637544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 45283345 - 45283103
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||  | ||| |||||||| || |||||||||||    
T  45283345 gatcgaaccacaccaatacaaagaat---gatgtgtggagcgacggagagcggtaaccaccaaacaaagtgt-ttgtgcaagcaataatcaacaaaacac 45283250  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattgg 276  Q
    ||||||||||||||||||||| | |||| |||||||||  || ||||||||||||||||||||||| |||||| |||||||| || ||| |||||||||     
T  45283249 cacctagatctaatctaggaaactagtgagaaacacaataca-caatcacaagataaacaaggagagggaagaagaaaacaa-aagcaccaagagattgt 45283152  T
Q  277 tcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  45283151 tcactcagttcggtccaaacttgacctactctggaggagagattgtact 45283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 100 - 325
Target Start/End: Complemental strand, 54635462 - 54635241
Alignment:
Q  100 aataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaacc 199  Q
    |||||||||||||||||| | |||||||||||||||||||||||||  | | | |||||||| || |||||||||||||||||||||||||||||||| |    
T  54635462 aataatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaac 54635364  T
Q  200 aagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagattggtcacccagttcggtccaaactt 298  Q
    ||||| |||||||||  || |||||||||||||||  |||||| |||||| |||||||| || ||| |||||||||| ||||||||||||||||||||||    
T  54635363 aagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaactt 54635268  T
Q  299 gacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||    
T  54635267 gacctactctggaggagagtttgtact 54635241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 6716859 - 6716616
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaaaca 175  Q
    ||||||||||||||||| |||||| |   |||||||||||| ||||| || ||||||||||||||||||  | | | |||||||| || |||| ||||||    
T  6716859 gatcgaaccacaccaatgcaaagagt---gatgtgtggagcaacggaaagcggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaaccaaaaca 6716764  T
Q  176 ccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagatt 274  Q
    |||||||||||||||||||||| |||||||||||| ||||   ||||||||||||||||  ||| || |||||| |||||||| || ||| |||||||||    
T  6716763 ccacctagatctaatctaggaaacaagtgtgaaactcaaaaatacaatcacaagataaa--aggggagggaagaagaaaacaa-aagcaccaaagagatt 6716667  T
Q  275 ggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716666 gttcacccagttcggtccaaacttgacctactctggaggagagtttgtact 6716616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 7779821 - 7780047
Alignment:
Q  82 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaa-caccacc 180  Q
    |||||||||||||| |||  ||| |||||||||||| | ||||||||||||||||||| |||||  | |   |||||||| || |||||||| || ||||    
T  7779821 aaccacaccaatacgaag--taa-gatgtgtggagcaaaggagagtggtaaccaccaa-caaagtgtgt---gcaagcaataatcaacaaaaacagcacc 7779913  T
Q  181 tagatctaatctaggaaccaagtgtgaaa-cacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtca 279  Q
    ||||||||||||||||| ||||||  ||| |||||  || ||| |||||||||||  |||||| |||||| |||||||| | |||| ||||||||| |||    
T  7779914 tagatctaatctaggaaacaagtgaaaaaacacaataca-caagcacaagataaa--aggagagggaagaggaaaacaa-agacaccaagagattgttca 7780009  T
Q  280 cccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| || ||||||||||||||||||||||||||||||    
T  7780010 cccactttggtccaaacttgacctactctggaggagag 7780047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 170 - 325
Target Start/End: Complemental strand, 801355 - 801209
Alignment:
Q  170 aaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaag 269  Q
    |||||| ||||||||||||||||||||| |||||| |||| |||   ||| |  |||||||||||  |||||| |||||| |||||||| | |||| |||    
T  801355 aaaacagcacctagatctaatctaggaaacaagtg-gaaaaaca---caata--cacaagataaa--aggagagggaagaagaaaacaa-agacaccaag 801265  T
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  801264 agattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 801209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 23200022 - 23200181
Alignment:
Q  154 gcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaag-tgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatga 252  Q
    |||||||| || |||||| | | ||||||||||||||||||||| |||  ||  ||||||||| || ||| || ||||||||  |||||| |||||| ||    
T  23200022 gcaagcaataatcaacaataaaacacctagatctaatctaggaaacaaaatgaaaaacacaaacca-caagcataagataaa--aggagagggaagaaga 23200118  T
Q  253 aaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| | |||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23200119 aaacaa-agacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagag 23200181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 23197822 - 23197982
Alignment:
Q  153 agcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaag-tgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    ||||||||| || |||||| | | ||| ||||||||||||||||| |||  ||  ||||||||| || ||| |||||||||||  ||||||  ||||| |    
T  23197822 agcaagcaataatcaacaataaaacacatagatctaatctaggaaacaaaatgaaaaacacaaacca-caagcacaagataaa--aggagagagaagagg 23197918  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23197919 aaaacaa-agacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagag 23197982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 7762437 - 7762390
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  7762437 agattgttcacccagttcggtccaaacttgacctactctggaggagag 7762390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 9581454 - 9581407
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9581454 agattgttcacccagttcggtccaaacttgacctactctggaggagag 9581407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 43401788 - 43401844
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  43401788 aacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagag 43401844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 9636114 - 9636169
Alignment:
Q  262 acacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  9636114 acaccaagagattgttcacccagttcggttcaaacttgacctactttggaggagag 9636169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 19683885 - 19683932
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  19683885 agattgttcacccagttcggtccaaacttgacctactatggaggagag 19683932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 37408630 - 37408583
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  37408630 agattgttcacccagttcgatccaaacttgacctactctggaggagag 37408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 45095335 - 45095288
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  45095335 agattgttcacccagttcggtccaaacttgacctactctagaggagag 45095288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 43403737 - 43403787
Alignment:
Q  267 aagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  43403737 aagagattgttcacccagttcggtccaaccatgacctactctggaggagag 43403787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 49199456 - 49199512
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||| ||||||||||||    
T  49199456 aacaccaagagattgttcacccagttcggtccaaccatgacctagtctggaggagag 49199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 5258140 - 5258187
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  5258140 agattgttcaccaagttcggtccaaacttgacctactctggagaagag 5258187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 7764636 - 7764589
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  7764636 agattgttcacccagttcggtctaaatttgacctactctggaggagag 7764589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 34491383 - 34491337
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  34491383 agattgttcacccagttcggtccaa-cttgacctactctggaggagag 34491337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 5260319 - 5260366
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||| |||||||||||||||||||||||| ||||| ||||    
T  5260319 agattgttcaccaagttcggtccaaacttgacctactttggagaagag 5260366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 4570115 - 4570077
Alignment:
Q  279 acccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  4570115 acccagttcggtccaaacttcacctactctggagtagag 4570077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 6095603 - 6095642
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  6095603 tcacacagttcggtccaa-cttgacctactctggaggagag 6095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 40913473 - 40913418
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| ||||||||| | |||||||||||||| ||||||||||| ||||| ||||||    
T  40913473 aacaccaagagattgttgacccagttcggtcc-aacttgacctaatctgggggagag 40913418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 15290917 - 15290641
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15290917 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 15290818  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  15290817 ttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 15290720  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15290719 agaagaaaacaataaacacaaagagattggacacccagttcggtccaaacttgacctactctggaggagagtttgtact 15290641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 15471286 - 15471010
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15471286 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 15471187  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  15471186 ttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 15471089  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15471088 agaagaaaacaataaacacaaagagattggacacccagttcggtccaaacttgacctactctggaggagagtttgtact 15471010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 42575100 - 42575375
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  42575100 tgttgtgaatccccgagcctccaagacccggatcgaaccacaccaatacaaactataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 42575199  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caatcacaagataaacaaggagatgg 245  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||| ||| ||||||||  ||||||||| ||    
T  42575200 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaaacacaagat--acaaggagaggg 42575295  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575296 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 42575375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 25690313 - 25690071
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||||||||||   |||||||||||| | |||||||||||||||||||||||||  | | | ||||||||||| |||||||||||    
T  25690313 gatcgaaccacaccaatacaaagaat---gatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaagaatcaacaaaacac 25690218  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagattg 275  Q
    ||||||||||||||||||||| |||||| |||||||||| || || ||||||||||||  ||| || |||||| |||||||| |||||| ||||||||||    
T  25690217 cacctagatctaatctaggaaacaagtgagaaacacaaaaca-cactcacaagataaa--aggggagggaagaagaaaacaacaaacaccaaagagattg 25690121  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25690120 ttcacccagttcggtccaaacttgacctactctggaggagagtttgtact 25690071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 3439861 - 3439620
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||  | |   |||||||| || |||||||||||    
T  3439861 gatcgaaccacaccaatactaaaaa-aatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgtgt---gcaagcaacaatcaacaaaacac 3439766  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagattg 275  Q
    ||||||||||||||||||||| |||||| ||||| |||| || |||||||||||||||  |||||| |||||| |||||||| || ||| ||||||||||    
T  3439765 cacctagatctaatctaggaaacaagtgagaaactcaaaaca-caatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattg 3439670  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
     ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  3439669 ttcatccagttcggtccaaacttgacctactctggaggagagattgtact 3439620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 317
Target Start/End: Complemental strand, 2628002 - 2627861
Alignment:
Q  172 aacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagag 271  Q
    |||| ||||||||||||||||||||| ||||||  || || ||| || ||| |||||||||||  |||||| |||||| |||||||| | |||| |||||    
T  2628002 aacaacacctagatctaatctaggaaacaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaa-agacaccaagag 2627907  T
Q  272 attggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||  |||||||||||||||||||||||||||||||||||||||||    
T  2627906 attattcacccagttcggtccaaacttgacctactctggaggagag 2627861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 317
Target Start/End: Complemental strand, 42498459 - 42498319
Alignment:
Q  172 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaaga 270  Q
    |||| ||||||||||||||||||||| ||| |||  ||||||||| | |||| || ||||||||  ||||||  ||||| | |||||| | |||| || |    
T  42498459 aacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaa--aggaga--gaagagggaaacaa-acacaccaa-a 42498366  T
Q  271 gattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  42498365 gattgttcacccagttcggtccaaacttgacctactctggaggagag 42498319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 17982825 - 17982778
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  17982825 agattgttcacccagttcggtccaaacttgacctactctggaggagag 17982778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 31218429 - 31218382
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31218429 agattgttcacccagttcggtccaaacttgacctactctggaggagag 31218382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 34254327 - 34254374
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  34254327 agattgttcacccagttcggtccaaacttgacctactctagaggagag 34254374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 34256503 - 34256550
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  34256503 agattgttcacccagttcggtccaaacttgacctactctagaggagag 34256550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 1746216 - 1746262
Alignment:
Q  271 gattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1746216 gattgttcacccagttcggtccaaacttgacctactatggaggagag 1746262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 19945355 - 19945402
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  19945355 agattgttcacccagttcggttcaaacttgacctactctcgaggagag 19945402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 44304027 - 44303980
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  44304027 agattgttcacctagttcgatccaaacttgacctactctggaggagag 44303980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 42434995 - 42435034
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  42434995 tcacccagttcggtccaa-cttgacctactctggaggagag 42435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 32902096 - 32902133
Alignment:
Q  178 acctagatctaatctaggaaccaagtgtgaaacacaaa 215  Q
    |||||||||||||||||||||||||||  |||||||||    
T  32902096 acctagatctaatctaggaaccaagtgaaaaacacaaa 32902133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 11384149 - 11384110
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  11384149 tcacccagttcggtccaa-cttaacctactctggaggagag 11384110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 18655564 - 18655525
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  18655564 tcacccagttcggtccaa-cttgacctactttggaggagag 18655525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 13154308 - 13154032
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13154308 tgttgtgaatcctcggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 13154209  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  13154208 ttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 13154111  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13154110 agaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 13154032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 33341878 - 33342156
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33341878 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 33341977  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaac-aaggagatg 244  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||||||| ||||||| |    
T  33341978 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaa--acaaagcaactaaacacaagataaacaaaggagagg 33342075  T
Q  245 gaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33342076 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 33342156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 25421698 - 25421423
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  25421698 tgttgtgaatccccgagcctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 25421600  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  25421599 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gga 25421502  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25421501 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 25421423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 34165251 - 34164975
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34165251 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 34165152  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagatgg 245  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||| ||    
T  34165151 ttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagaggg 34165055  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34165054 aagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 34164975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 44 - 325
Target Start/End: Complemental strand, 34167475 - 34167197
Alignment:
Q  44 aactgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaa 143  Q
    ||||||||||||||||||  ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34167475 aactgttgtgaatccccgagcctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaa 34167377  T
Q  144 agcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagat 243  Q
    |   |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||     
T  34167376 aaaatattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagag 34167279  T
Q  244 ggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34167278 ggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagtttgtact 34167197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 6027638 - 6027364
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |     
T  6027638 tgttgtgaatccccggatctccaagact-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagaggggtaaccacctaacaaggt 6027540  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||    
T  6027539 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaa-atggag--gga 6027443  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  6027442 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacatactctggaggagagattgtact 6027364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 77 - 321
Target Start/End: Original strand, 16578327 - 16578565
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||  | |   |||||||| ||||||||||||||    
T  16578327 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16578421  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaac-aataaacacaaagagattg 275  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||| || |||||||||||    
T  16578422 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacac-caaagagattg 16578519  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  16578520 ttcacccagttcggtccaaacttgacctactctggaggagagtttg 16578565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 77 - 321
Target Start/End: Complemental strand, 16617053 - 16616815
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||  | |   |||||||| ||||||||||||||    
T  16617053 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16616959  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaac-aataaacacaaagagattg 275  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||| || |||||||||||    
T  16616958 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacac-caaagagattg 16616861  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  16616860 ttcacccagttcggtccaaacttgacctactctggaggagagtttg 16616815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 77 - 321
Target Start/End: Complemental strand, 16653471 - 16653233
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||  | |   |||||||| ||||||||||||||    
T  16653471 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16653377  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaac-aataaacacaaagagattg 275  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||| || |||||||||||    
T  16653376 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacac-caaagagattg 16653279  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  16653278 ttcacccagttcggtccaaacttgacctactctggaggagagtttg 16653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 77 - 321
Target Start/End: Complemental strand, 16555228 - 16554990
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||  | |   |||||||| ||||||||||||||    
T  16555228 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16555134  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaac-aataaacacaaagagattg 275  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||| || |||||||||||    
T  16555133 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacac-caaagagattg 16555036  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
     |||||||||||||||||||||||||||||| ||||||||||||||    
T  16555035 ttcacccagttcggtccaaacttgacctactttggaggagagtttg 16554990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 77 - 321
Target Start/End: Complemental strand, 16631784 - 16631546
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||  | |   |||||||| ||||||||||||||    
T  16631784 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16631690  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaac-aataaacacaaagagattg 275  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||| || |||||||||||    
T  16631689 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacac-caaagagattg 16631592  T
Q  276 gtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
     |||||||||||||||||||||||||||||| ||||||||||||||    
T  16631591 ttcacccagttcggtccaaacttgacctactttggaggagagtttg 16631546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 47 - 185
Target Start/End: Original strand, 6136079 - 6136216
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  6136079 tgttgtgaatccccggacctccaaggcc-ggatcgaaccataccaatacaaagaataatgatgtgtggagcaacggagagtggtaaccaccaaacaaagt 6136177  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagat 185  Q
     ||||| ||||||||||||||||||||||||||||||||    
T  6136178 gtattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 47 - 160
Target Start/End: Complemental strand, 13159164 - 13159051
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13159164 tgttgtgaatcctcggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 13159065  T
Q  147 ttattgagcaagca 160  Q
    ||||||||||||||    
T  13159064 ttattgagcaagca 13159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 27648210 - 27647977
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    |||||||||||||||||||||     ||||||||||||||| | ||||||||||||||||| |||||||  | | | |||||||| || |||||||||||    
T  27648210 gatcgaaccacaccaatacaag----aatgatgtgtggagcaaaggagagtggtaaccaccgaacaaagtgtgt-gtgcaagcaataatcaacaaaacac 27648116  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattgg 276  Q
    ||||||||||||||||||||| |||||| ||||| |||  ||       |||||||||  |||||| |||||| |||||||| || ||| |||||||||     
T  27648115 cacctagatctaatctaggaaacaagtgagaaactcaataca-------caagataaa--aggagagggaagaagaaaacaa-aagcaccaagagattgt 27648026  T
Q  277 tcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27648025 tcacccagttcggtccaaacttgatctactctggaggagagtttgtact 27647977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 317
Target Start/End: Complemental strand, 412369 - 412227
Alignment:
Q  172 aacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaaga 270  Q
    |||| ||||||||||||||||||| | ||||||  ||||||||  || ||| |||||||||||  |||||| |||||| |||||||| | |||| |||||    
T  412369 aacagcacctagatctaatctaggtaacaagtgaaaaacacaataca-caagcacaagataaa--aggagagggaagaagaaaacaa-atacaccaaaga 412274  T
Q  271 gattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  412273 gattgttcacccagttcggtccaaacttgacctactctggaggagag 412227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 3072670 - 3072802
Alignment:
Q  181 tagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcac 280  Q
    ||||||||||||||||| ||||||  || || ||| || ||| |||||||||||  |||||| |||||| |||||||| | |||| ||||||||| ||||    
T  3072670 tagatctaatctaggaaacaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaa-agacaccaagagattgttcac 3072765  T
Q  281 ccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  3072766 ccagttcggtccaaacttgacctactctggaggagag 3072802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 6097349 - 6097494
Alignment:
Q  170 aaaacaccacctagatctaatctaggaaccaagtgtgaaa-cacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aa 267  Q
    |||||| ||||| ||||||||||||| | ||||||  ||| |||||  || |||||||||||||  |||||||| |||||| |||||||| | |||| ||    
T  6097349 aaaacagcaccttgatctaatctaggtaacaagtggaaaaacacaataca-caatcacaagata--caaggagagggaagaggaaaacaa-agacaccaa 6097444  T
Q  268 agagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6097445 agagattgttcacccagttcggtccaaacttgacctactctggaggagag 6097494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 2171520 - 2171575
Alignment:
Q  262 acacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2171520 acaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 2171575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 16452325 - 16452372
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16452325 agattgttcacccagttcggtccaaacttgacctactctggaggagag 16452372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 30834539 - 30834579
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30834539 tcacccagttcggtccaaacttgacctactctggaggagag 30834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 5406196 - 5406243
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  5406196 agattgttcacccagttcggttcaaacttgacctactctggaggagag 5406243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 5410521 - 5410568
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  5410521 agattgttcacccagttcggttcaaacttgacctactctggaggagag 5410568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 31404671 - 31404718
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  31404671 agattgttcacccagttcggtccaaacttggcctactctggaggagag 31404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 5409076 - 5409112
Alignment:
Q  281 ccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  5409076 ccagttcggtccaaacttgacctactctggaggagag 5409112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 5413401 - 5413437
Alignment:
Q  281 ccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  5413401 ccagttcggtccaaacttgacctactctggaggagag 5413437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 3808701 - 3808751
Alignment:
Q  267 aagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||||| ||||| |||||||||||| | ||||||||||||||||||||    
T  3808701 aagagattgttcacctagttcggtccaatcatgacctactctggaggagag 3808751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 17763155 - 17763115
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  17763155 tcacctagttcggtccaaacttgatctactctggaggagag 17763115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 21589095 - 21589056
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21589095 tcacccagttcggtccaa-cttgacctactctggaggagag 21589056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 21593828 - 21593789
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21593828 tcacccagttcggtccaa-cttgacctactctggaggagag 21593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 33160348 - 33160395
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||| |||||||||||||  |||||||||||||||    
T  33160348 agattgttcacccagtttggtccaaacttgaaatactctggaggagag 33160395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 6594334 - 6594609
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6594334 tgttgtgaatccccgagcctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 6594432  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  6594433 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gga 6594530  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6594531 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagtttgtact 6594609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 6592116 - 6592391
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6592116 tgttgtgaatccccgagcctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 6592214  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  6592215 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagaaaaacaaggag--gga 6592312  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592313 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagtttgtact 6592391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 32060097 - 32060373
Alignment:
Q  46 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 145  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32060097 ctgttgtgaatccccgaacctccaaggcc-ggatcgaaccacaccaatataaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaag 32060195  T
Q  146 cttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgg 245  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  32060196 tttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gg 32060293  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  32060294 aagaagaaaacaataaacacaaagagattgttcaccaagttcggtccaaacttgacctactctggaggagagattgtact 32060373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 18388535 - 18388811
Alignment:
Q  46 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 145  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18388535 ctgttgtgaatccccgaacctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaag 18388633  T
Q  146 cttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgg 245  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||| ||    
T  18388634 tttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaagagaggg 18388731  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18388732 aagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 18388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 18391972 - 18392247
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||     
T  18391972 tgttgtgaatccccgaacctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacagagagtggtaaccaccgaacaaagt 18392070  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||    
T  18392071 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 18392168  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18392169 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 18392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 44 - 325
Target Start/End: Original strand, 1560438 - 1560717
Alignment:
Q  44 aactgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaa 143  Q
    ||||||||||||||||||  ||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  1560438 aactgttgtgaatccccgagcctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacag 1560536  T
Q  144 agcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagat 243  Q
    ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1560537 agtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagag 1560636  T
Q  244 ggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||| |||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  1560637 ggaagaagaaaacaa-atacaccaagagattggttacccagttcggtccaaacttgacctactctggaggagagattgtact 1560717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 20344255 - 20344014
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||| ||||||||   |||||||||||| | |||||||||||||||||||||||||  | |   |||||||| || | |||||| ||    
T  20344255 gatcgaaccacaccaatgcaaagaat---gatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaatcgacaaaaaac 20344162  T
Q  177 ca---cctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaaca-caaagaga 272  Q
    ||   ||||||||||||||||||| |||||| |||||||||| | |||||||||||||||  ||||||| |||||| |||||||| || || ||||||||    
T  20344161 cagcacctagatctaatctaggaaacaagtgagaaacacaaaac-acaatcacaagataa--aaggagagggaagaagaaaacaa-aagcaccaaagaga 20344066  T
Q  273 ttggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  20344065 ttgttcacccagttcggtcc-aacttgacctactctggaggagagattgtact 20344014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 39731654 - 39731494
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||| |||||| |    
T  39731654 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--aggagagggaagagg 39731558  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  39731557 aaaacaa-agacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagag 39731494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 24790074 - 24789966
Alignment:
Q  206 gaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctac 305  Q
    ||||||||| ||| |||||||||||||||  |||||| |||||| |||||  | | |||| ||||||||| |||||||||||||||||||||||||||||    
T  24790074 gaaacacaatgca-caatcacaagataaa--aggagagggaagaagaaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgacctac 24789978  T
Q  306 tctggaggagag 317  Q
    ||||||||||||    
T  24789977 tctggaggagag 24789966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 104 - 317
Target Start/End: Original strand, 43503991 - 43504197
Alignment:
Q  104 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaa-g 202  Q
    |||||||||||||| | ||||||||||||||||||| |||||  | | | |||||||| || ||||||||   || |||||||||||||||||| ||| |    
T  43503991 atgatgtgtggagcaaaggagagtggtaaccaccaa-caaagtgtgt-gtgcaagcaataatcaacaaaaa--cagctagatctaatctaggaatcaaag 43504086  T
Q  203 tgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacc 302  Q
    ||  || || ||| || ||| |||||||||||  |||||| |||||| |||||||| | |||| ||||||||| |||||||||||| |||||||||||||    
T  43504087 tgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaa-agacaccaagagattgttcacccagttcgatccaaacttgacc 43504182  T
Q  303 tactctggaggagag 317  Q
    |||| ||||||||||    
T  43504183 tactatggaggagag 43504197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 35854094 - 35854039
Alignment:
Q  262 acacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35854094 acaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 35854039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 24790333 - 24790230
Alignment:
Q  104 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 203  Q
    |||||||||||||| ||||| |||||||||||||||||||||      | ||||| || || |||||||||||||||||||||||||||||||| || ||    
T  24790333 atgatgtgtggagcaacggaaagtggtaaccaccaaacaaag---tgcgtgcaagtaataatcaacaaaacaccacctagatctaatctaggaaacaggt 24790237  T
Q  204 gtgaaac 210  Q
    | |||||    
T  24790236 gagaaac 24790230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 23555212 - 23555165
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23555212 agattgttcacccagttcggtccaaacttgacctactctggaggagag 23555165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 25766948 - 25767003
Alignment:
Q  262 acacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  25766948 acaccaagagattgttcacccagttcggtctaaacttgacctactctggaggagag 25767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 29991225 - 29991178
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  29991225 agattgttcacccagttcggtccaaacttgacctactctggaggagag 29991178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 34310712 - 34310759
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  34310712 agattgttcacccagttcggtccaaacttgacctactctggaggagag 34310759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 25616025 - 25615978
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  25616025 agattgttcgcccagttcggtccaaacttgacctactctggaggagag 25615978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 48408984 - 48408929
Alignment:
Q  262 acacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||||    
T  48408984 acaccaagaaattgttcacccagttcggtctaaacttgacatactctggaggagag 48408929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 2390462 - 2390407
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| ||||||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  2390462 aacaccaagagattattcacctagttcggtccaa-cttgacctactctggaggagag 2390407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 22270137 - 22270098
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  22270137 tcacccagttcggtccaa-cttgacctactctggaggagag 22270098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 32358058 - 32358097
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  32358058 tcacccagttcggtccaa-cttgacctactctggaggagag 32358097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 19502350 - 19502303
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  19502350 agattgttcacccacttcgttccaaacttgacttactctggaggagag 19502303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 3259159 - 3259120
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  3259159 tcacccagttcggttcaa-cttgacctactctggaggagag 3259120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 4178945 - 4178889
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtactg 326  Q
    |||||| ||||| |||| ||| |||||||||||| ||||||||||||| ||| ||||    
T  4178945 agattgttcacctagtttggttcaaacttgacctgctctggaggagagattgaactg 4178889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 8359319 - 8359359
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  8359319 tcacccagttcggtccaacaatgacctactctggaggagag 8359359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 5138685 - 5138407
Alignment:
Q  46 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5138685 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 5138586  T
Q  146 cttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac--aatcacaagataaacaaggagat 243  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||  ||||||||||  || |||||||||||||||||||     
T  5138585 cttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtgtgaa--acaaagcaaccaaaacacaagataaacaaggagag 5138489  T
Q  244 ggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5138488 ggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 5138407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 5136459 - 5136182
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136459 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 5136360  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac--aatcacaagataaacaaggagatg 244  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||  ||||||||||  || ||||||||||||||||||| |    
T  5136359 ttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtgtgaa--acaaagcaaccaaaacacaagataaacaaggagagg 5136263  T
Q  245 gaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136262 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 5136182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 8395996 - 8395720
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8395996 tgttgtgaatccccggacctccaagacc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 8395898  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| |||    
T  8395897 ttattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataca-atggagaggga 8395799  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8395798 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 8395720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 8393787 - 8393511
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  8393787 tgttgtgaatccccggacctcaaagacc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacgaagt 8393689  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| |||    
T  8393688 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataca-atggagaggga 8393590  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8393589 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 8393511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 7125294 - 7125019
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||     
T  7125294 tgttgtgaatccccgaacctccaaggcc-ggatcgaaccacaccaatataaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 7125196  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  7125195 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gga 7125098  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||    |||||||||||||||||||||| |||||||    
T  7125097 agaagaaaacaataaacacaaagagattgttcacccagttcggtctttgcttgacctactctggaggagagattgtact 7125019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 7123075 - 7122800
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  7123075 tgttgtgaatccccgaacctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 7122977  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  7122976 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gga 7122879  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||||| |||| |||||||||||||||    ||||||||||| |||||||||| |||||||    
T  7122878 agaagaaaacaataaacacaaagaaattgttcacccagttcggtctttgcttgacctactatggaggagagattgtact 7122800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 31495191 - 31495359
Alignment:
Q  154 gcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaac------aaggagatgga 246  Q
    |||||||| || |||||||||| ||||||||||||||||||||| ||| |||  || || ||| || ||| |||||||||||       ||||||| |||    
T  31495191 gcaagcaataatcaacaaaacagcacctagatctaatctaggaaacaaagtgaaaagcataaaaca-caagcacaagataaaaggataaaaggagaggga 31495289  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||| |||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31495290 agaggaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 31495359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 56178633 - 56178680
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  56178633 agattgttcacccagttcggtccaaacttgacctactctggaggagag 56178680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 2209895 - 2209839
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  2209895 aacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagag 2209839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 29999809 - 29999849
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29999809 tcacccagttcggtccaaacttgacctactctggaggagag 29999849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 5370079 - 5370126
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  5370079 agattgttcactcagttcggtccaaacttgacctactctggaggagag 5370126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 13992289 - 13992336
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  13992289 agattgttcacctagttcggtccaaacttgacctactctggaggagag 13992336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 48143215 - 48143168
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  48143215 agattgttcacccagtttggtccaaacttgacctactctggaggagag 48143168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 50262688 - 50262741
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggagga 314  Q
    ||||| ||||||||| ||||||||||||||||||   |||||||||||||||||    
T  50262688 aacaccaagagattgttcacccagttcggtccaacaatgacctactctggagga 50262741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 52095361 - 52095405
Alignment:
Q  272 attggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  52095361 attgttcacccagttcggtccaaacttg-cctactctggaggagag 52095405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 41964580 - 41964541
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41964580 tcacccagttcggtccaa-cttgacctactctggaggagag 41964541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 52082660 - 52082707
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||  |||||| |||||||||||||||||||||||||    
T  52082660 agattgttcacccaaatcggtctaaacttgacctactctggaggagag 52082707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 8648303 - 8648264
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  8648303 tcacccagtttggtccaa-cttgacctactctggaggagag 8648264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 41639590 - 41639551
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  41639590 tcactcagttcggtccaa-cttgacctactctggaggagag 41639551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 50673851 - 50673890
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  50673851 tcacctagttcggtccaa-cttgacctactctggaggagag 50673890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 47 - 321
Target Start/End: Complemental strand, 40380483 - 40380212
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40380483 tgttgtgaatccccgagcctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 40380385  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  40380384 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gga 40380287  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40380286 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagtttg 40380212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 46 - 321
Target Start/End: Complemental strand, 40382695 - 40382423
Alignment:
Q  46 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 145  Q
    ||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40382695 ctgttgtgaatccccgagcctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcggcggagagtggtaaccaccaaacaaag 40382597  T
Q  146 cttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgg 245  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  40382596 tttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggag--gg 40382499  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttg 321  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40382498 aagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagtttg 40382423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 16544804 - 16544526
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16544804 tgttgtgaatccccgagcctccaaggaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 16544705  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaac-aaggagatg 244  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||| ||||||| |    
T  16544704 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaaggagagg 16544607  T
Q  245 gaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16544606 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 16544526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 25078513 - 25078238
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||  ||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||     
T  25078513 tgttgtgaatccccaaacctccaaggcc-ggatcgaaccacaccaatacaaagaagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 25078415  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||    
T  25078414 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 25078317  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25078316 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 25078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 25136482 - 25136207
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    ||||||||||||||  ||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||     
T  25136482 tgttgtgaatccccaaacctccaaggcc-ggatcgaaccacaccaatacaaagaagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 25136384  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||    
T  25136383 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 25136286  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25136285 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 25136207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 16547026 - 16546748
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16547026 tgttgtgaatccccgagcctccaaggaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtgataaccaccaaacaaagc 16546927  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaac-aaggagatg 244  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||  |||||||||| || |||||||||||| ||||||| |    
T  16546926 ttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaaggagagg 16546829  T
Q  245 gaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16546828 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 16546748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 10593651 - 10593375
Alignment:
Q  46 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 145  Q
    |||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10593651 ctgttgtgtatccccgtatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 10593553  T
Q  146 cttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgg 245  Q
      ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||    
T  10593552 tgtattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagaggg 10593454  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||  |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10593453 aagtagaaaacaa-atacaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 10593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 75 - 325
Target Start/End: Original strand, 22536101 - 22536341
Alignment:
Q  75 cggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaa-caaagcttattgagcaagcaagaaacaacaaaa 173  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||| |||||  |||   |||||||| || ||||||||    
T  22536101 cggatcgaaccacaccaatacaaagaat---gatgtgtggagcgacggagagcggtaaccaccaaagcaaagtgtat---gcaagcaacaatcaacaaaa 22536194  T
Q  174 caccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagat 273  Q
     || |||||||||||||||||||| |||||| ||||| |||| || |||||||||||||||  ||| || |||||| |||||||| || ||| |||||||    
T  22536195 aac-acctagatctaatctaggaaacaagtgagaaactcaaaaca-caatcacaagataaa--aggggagggaagaagaaaacaa-aagcaccaagagat 22536289  T
Q  274 tggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22536290 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 22536341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 78 - 325
Target Start/End: Original strand, 29750969 - 29751211
Alignment:
Q  78 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacacc 177  Q
    ||||||||||||||||||||  |||| ||||||||||||| | ||||||||||||||||||||||| |  | | | |||||||| || ||||||||||||    
T  29750969 atcgaaccacaccaatacaagaaata-tgatgtgtggagcaaaggagagtggtaaccaccaaacaatgtgtgt-gtgcaagcaataatcaacaaaacacc 29751066  T
Q  178 acctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggt 277  Q
    |||||||| |||||||| || |||||| ||||||||   || |||||||||||||||  |||||| |||||| |||||||| | |||| ||||||||| |    
T  29751067 acctagatataatctagaaaacaagtgagaaacacagtaca-caatcacaagataaa--aggagagggaagaagaaaacaaaagacaccaagagattgtt 29751163  T
Q  278 cacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  29751164 cacccagttcggtccaaacttgacctactctggaggagagattgtact 29751211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 79 - 325
Target Start/End: Complemental strand, 29720721 - 29720481
Alignment:
Q  79 tcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacacca 178  Q
    |||||||||||||||||||  |||| || |||||||||| | |||||||||||||||||||||||||  | |  | ||||||| || |||||||||||||    
T  29720721 tcgaaccacaccaatacaagaaata-tgttgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgta-caagcaataatcaacaaaacacca 29720624  T
Q  179 cctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtc 278  Q
    ||||||||||||||||||| |||||| |||||||||  || |||||||||||||||  |||||| |||||| |||||||| | |||| ||||||||| ||    
T  29720623 cctagatctaatctaggaaacaagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-agacaccaagagattgttc 29720528  T
Q  279 acccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  29720527 acccagttcggtccaaacttgacctactctagaggagagattgtact 29720481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 79 - 325
Target Start/End: Complemental strand, 29722881 - 29722641
Alignment:
Q  79 tcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacacca 178  Q
    |||||||||||||||||||  |||| || |||||||||| | | |||||||||||||||||||||||  | |  | ||||||| || |||||||||||||    
T  29722881 tcgaaccacaccaatacaagaaata-tggtgtgtggagcaaagtagagtggtaaccaccaaacaaagtgtgtgta-caagcaataatcaacaaaacacca 29722784  T
Q  179 cctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtc 278  Q
    ||||||||||||||||||| |||||| |||||||||  || |||||||||||||||  |||||| |||||| |||||||| | |||| ||||||||| ||    
T  29722783 cctagatctaatctaggaaacaagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-agacaccaagagattgttc 29722688  T
Q  279 acccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  29722687 acccagttcggtccaaatttgacctactctggaggagagattgtact 29722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 9789042 - 9789267
Alignment:
Q  82 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacct 181  Q
    |||||||||||||||||| ||   |||||||||||| | ||| ||| ||||||||||| |||||  | |   |||||||| || |||||||||| |||||    
T  9789042 aaccacaccaatacaaagtat---gatgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgtgt---gcaagcaaaaatcaacaaaacagcacct 9789134  T
Q  182 agatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagattggtcac 280  Q
    ||||||||||||||||  |||||  ||||||||  || ||| ||||||||||||  ||||| |||||| |||||||| | |||| |||||||||| ||||    
T  9789135 agatctaatctaggaaagaagtgaaaaacacaataca-caagcacaagataaac--ggagagggaagaggaaaacaa-agacaccaaagagattgttcac 9789230  T
Q  281 ccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  9789231 ccagttcggtccaaacttgacctactctggaggagag 9789267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 16409762 - 16409600
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || || ||| || ||| |||||||||||  |||||| |||||| |    
T  16409762 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagagg 16409666  T
Q  252 aaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16409665 aaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 16409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 18441462 - 18441691
Alignment:
Q  82 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacct 181  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| ||||||||||| |||||  | |   |||||||| || |||||||||| |||||    
T  18441462 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgtgt---gcaagcaataatcaacaaaacagcacct 18441554  T
Q  182 agatctaatctaggaaccaagtgtgaaa----cacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagattgg 276  Q
    ||||||||||||||||  |||||  |||    |||||  || ||| ||||||||||||  ||||| |||||| |||||||| | |||| ||||||||||     
T  18441555 agatctaatctaggaaagaagtgaaaaaaaaacacaataca-caagcacaagataaac--ggagagggaagaggaaaacaa-agacaccaaagagattgt 18441650  T
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  18441651 tcacccagttcggtccaaacttgacctactctagaggagag 18441691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 172 - 317
Target Start/End: Complemental strand, 26178150 - 26178007
Alignment:
Q  172 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaag 269  Q
    |||| ||||||||||||||||||||| ||| |||  || || ||| || ||| |||||||||||  |||||| |||||| |||||||| | |||| ||||    
T  26178150 aacaacacctagatctaatctaggaatcaaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaa-agacaccaaag 26178055  T
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  26178054 agattgttcacccagttcggtccaaacttgacctactctggaggagag 26178007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 26170983 - 26170887
Alignment:
Q  219 acaatcacaagataaacaaggagatggaagatgaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| |||||||||||  |||||| |||||| |||||||| | |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26170983 acaagcacaagataaa--aggagagggaagaggaaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 26170887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 37439313 - 37439266
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  37439313 agattgttcacccagttcggtccaaacttgacctactctggaggagag 37439266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 13343232 - 13343185
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||    
T  13343232 agattgttcacccagttcggtccaaacatgacctactctggaggagag 13343185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 25412932 - 25412885
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  25412932 agattgttcacccagttcagtccaaacttgacctactctggaggagag 25412885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 13239921 - 13239876
Alignment:
Q  272 attggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  13239921 attgttcacccagttcggtccaaatttgacctactctggaggagag 13239876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 213630 - 213590
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  213630 tcacccagttcggtccaaacttgacctactatggaggagag 213590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 30182760 - 30182713
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  30182760 agattgttcatccagttcggtccaaacttgacatactctggaggagag 30182713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 36074039 - 36074086
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  36074039 agattgttcatccagttcggtccaaacttgacctactttggaggagag 36074086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 28278485 - 28278441
Alignment:
Q  272 attggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||    
T  28278485 attgttcacccagttcggtccaa-cttgacctactctggaggagag 28278441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 40147425 - 40147386
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  40147425 tcacccagttcggtccaa-cttgacctactctggaggagag 40147386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 5058209 - 5058170
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  5058209 tcacccagttcggtccaa-cttgacctactctagaggagag 5058170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 43 - 325
Target Start/End: Complemental strand, 44204028 - 44203749
Alignment:
Q  43 aaactgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaca 142  Q
    |||||||||||||||||||  ||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44204028 aaactgttgtgaatccccgagcctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaca 44203930  T
Q  143 aagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggaga 242  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  44203929 aagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggaga 44203832  T
Q  243 tggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
     |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44203831 gggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 44203749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 77 - 325
Target Start/End: Complemental strand, 9036775 - 9036533
Alignment:
Q  77 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacac 176  Q
    ||||||||||||||||| ||||| ||   |||||||||||| | |||||||||||||||||||||||||  | ||| |||||||| ||||||||||||||    
T  9036775 gatcgaaccacaccaatgcaaaggat---gatgtgtggagctaaggagagtggtaaccaccaaacaaagtgt-ttgtgcaagcaacaaacaacaaaacac 9036680  T
Q  177 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattgg 276  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| | |||| |||||||||     
T  9036679 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaa-atacaccaagagattgt 9036582  T
Q  277 tcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  9036581 tcacccagttcggtccaaacttgacctactctcgaggagagattgtact 9036533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 78 - 325
Target Start/End: Complemental strand, 21054314 - 21054075
Alignment:
Q  78 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacacc 177  Q
    ||||||||||||||||||||  |||| ||||||||||||| | ||||||||||||||||||||| |||  | |   |||||||| || ||||||||||||    
T  21054314 atcgaaccacaccaatacaagaaata-tgatgtgtggagcaaaggagagtggtaaccaccaaactaagtgtgt---gcaagcaataatcaacaaaacacc 21054219  T
Q  178 acctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggt 277  Q
    |||||||||||||||||||| |||||| |||||||||  || |||||||||||||||  |||||| |||||| |||||||| | |||| |||||||||||    
T  21054218 acctagatctaatctaggaaacaagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-atacaccaagagattggt 21054123  T
Q  278 cacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21054122 cacccagttcggtccaaacttgacctactctggaggagagtttgtact 21054075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 78 - 325
Target Start/End: Complemental strand, 9987558 - 9987318
Alignment:
Q  78 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacacc 177  Q
    |||||||||||||||||| || |||| ||||||||||||| | ||||||||||||||||||| |||||  | |   |||||||| || ||||||||||||    
T  9987558 atcgaaccacaccaatacgaaaaata-tgatgtgtggagcaaaggagagtggtaaccaccaatcaaagtgtgt---gcaagcaataatcaacaaaacacc 9987463  T
Q  178 acctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggt 277  Q
    |||||||||||||||||||| |||||| ||||||| |  || |||||||||||||||  |||||| |||||| |||||||| | |||| ||||||||| |    
T  9987462 acctagatctaatctaggaaacaagtgagaaacactataca-caatcacaagataaa--aggagagggaagaagaaaacaaaagacaccaagagattgtt 9987366  T
Q  278 cacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9987365 cacccagttcggtccaaacttgacctactctggaggagagattgtact 9987318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 40282711 - 40282494
Alignment:
Q  104 atgatgtgtggagcgacggagagtggtaaccaccaaa-caaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaag 202  Q
    |||||||||||||| | |||||||||||||||||||| |||||  | | | |||||||| || |||||||||||||||||||||||||||||||| ||||    
T  40282711 atgatgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaag 40282613  T
Q  203 tgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacc 302  Q
    || |||||||||  || |||||||||||||||  |||||| |||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||    
T  40282612 tgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgacc 40282517  T
Q  303 tactctggaggagagtttgtact 325  Q
    ||||||||||||||| |||||||    
T  40282516 tactctggaggagagattgtact 40282494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 104 - 325
Target Start/End: Original strand, 20622072 - 20622288
Alignment:
Q  104 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 203  Q
    |||||||||||||| | ||| ||| |||||||||||||||||  | | | |||||||| || |||||||||||||||||||||||||||||||| |||||    
T  20622072 atgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagt 20622170  T
Q  204 gtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacct 303  Q
    | |||||||||  || |||||||||||||||  |||||| |||||| |||||||| | |||| ||||||||| |||||||||||||||||||||||||||    
T  20622171 gagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgacct 20622266  T
Q  304 actctggaggagagtttgtact 325  Q
    |||||||||||||| |||||||    
T  20622267 actctggaggagagattgtact 20622288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 51765682 - 51765522
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||| |||||| |    
T  51765682 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--aggagagggaagagg 51765586  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  51765585 aaaacaa-agacaccaa-agattgttcacccagttcggtccaaacttgtcctactctggaggagag 51765522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 8550783 - 8550830
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8550783 agattgttcacccagttcggtccaaacttgacctactctggaggagag 8550830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 13316348 - 13316395
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  13316348 agattgttcacccagttcggtccaaacttgacctactctggaggagag 13316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 42297962 - 42298018
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  42297962 aacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagag 42298018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 3189502 - 3189455
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3189502 agattgttcacccagttcggtccaaacttgacctactctggatgagag 3189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 3198319 - 3198272
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3198319 agattgttcacccagttcggtccaaacttgacctactctggatgagag 3198272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 3207158 - 3207111
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3207158 agattgttcacccagttcggtccaaacttgacctactctggatgagag 3207111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 20762844 - 20762797
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  20762844 agattggtcacctagttcggtccaaacttgacctactctgtaggagag 20762797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 29136412 - 29136372
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  29136412 tcacctagttcggtccaaacttgacctactctggaggagag 29136372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 13547093 - 13547132
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  13547093 tcacccagttcggtccaa-cttgacctactctggaggagag 13547132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 13549004 - 13549043
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  13549004 tcacccagttcggtccaa-cttgacctactctggaggagag 13549043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 37168462 - 37168423
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  37168462 tcacccagttcggtccaa-cttgacctactctggaggagag 37168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 11348862 - 11348823
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  11348862 tcactcagttcggtccaa-cttgacctactctggaggagag 11348823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 28242469 - 28242429
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  28242469 tcacccagttcggtccaacaatgacctactctggaggagag 28242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 37033059 - 37033115
Alignment:
Q  261 aacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||| || |||||| |||||||||||||||||| | ||||||||| ||||| ||||    
T  37033059 aacacgaatagattgttcacccagttcggtccaaccatgacctactatggagaagag 37033115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 47255343 - 47255383
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  47255343 tcacccagttcggtccaacaatgacctactctggaggagag 47255383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 12647162 - 12647437
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  12647162 tgttgtgaatccccgagcctccaaggcc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 12647260  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||    
T  12647261 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 12647358  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12647359 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 12647437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 13655805 - 13656083
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||     
T  13655805 tgttgtgaatccccggacctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacagagt 13655903  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  13655904 atattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 13656003  T
Q  247 agatgaaaacaataaaca-caaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13656004 agaagaaaacaacaaacaccaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagattgtact 13656083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 6267023 - 6266808
Alignment:
Q  104 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 203  Q
    |||||||||||||| | |||||||||||||||||||||||||  | |   | |||||| || |||||||||| |||||||||||||||||||||  ||||    
T  6267023 atgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt---gtaagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagt 6266927  T
Q  204 gtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacct 303  Q
    |  ||||||||  || ||| ||||||||||||  ||||| |||||| |||||||| | |||| ||||||||| |||||||||||||||||||||||||||    
T  6266926 gaaaaacacaataca-caagcacaagataaac--ggagagggaagaagaaaacaaaagacaccaagagattgttcacccagttcggtccaaacttgacct 6266830  T
Q  304 actctggaggagagtttgtact 325  Q
    |||||||||||||| |||||||    
T  6266829 actctggaggagagattgtact 6266808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 32289851 - 32289689
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || || ||| || ||| |||||||||||  |||||| |||||| |    
T  32289851 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagagg 32289755  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||  |   ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32289754 aaaacaaggacaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 32289689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 30833631 - 30833471
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||| |||||| |    
T  30833631 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--aggagagggaagagg 30833535  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  30833534 aaaacaa-agacaccaa-agattgttcacccagttcagtccaaacttgacctactctggaggagag 30833471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 4484213 - 4484373
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaagtgtgaaacacaaag-caacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| |||  ||||||  ||||  | |||| |||||||||||  |||||| |||||| |    
T  4484213 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaa-gtgaaaagcaaaaaccacaagcacaagataaa--aggagagggaagaag 4484309  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4484310 aaaacaa-agacaccaa-agattgttcacccagttctgtccaaacttgacctactctggaggagag 4484373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 317
Target Start/End: Original strand, 36987961 - 36988119
Alignment:
Q  155 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatga 252  Q
    ||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||||| |||| || ||||||||  ||||||  |||||       
T  36987961 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaa--aggaga--gaagagag 36988056  T
Q  253 aaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| | |||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  36988057 aaacaa-acacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagag 36988119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 4503129 - 4503176
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4503129 agattgttcacccagttcggtccaaacttgacctactctggaggagag 4503176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 45099926 - 45099879
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  45099926 agattgttcacccagttcggtccaaacttgacctactctggaggagag 45099879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 36205661 - 36205705
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggagga 314  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  36205661 agattgttcacccagttcggtccaaacttgacctactctggagga 36205705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 2334414 - 2334461
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  2334414 agattgttcccccagttcggtccaaacttgacctactctggaggagag 2334461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 6595002 - 6595049
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6595002 agattgttcactcagttcggtccaaacttgacctactctggaggagag 6595049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 5723252 - 5723299
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  5723252 agattgttcacccagttcggtccaaacttaacctactctagaggagag 5723299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 35446888 - 35446927
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  35446888 tcacccagttcggtccaa-cttgacctactctggaggagag 35446927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 45727093 - 45727054
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  45727093 tcacccagttcggtccaa-cttgacctactctggaggagag 45727054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 1631736 - 1631775
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  1631736 tcactcagttcggtccaa-cttgacctactctggaggagag 1631775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 47 - 325
Target Start/End: Original strand, 2380 - 2655
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||  ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2380 tgttgtgaatccccgagcctccaaggtc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 2478  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatgga 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||    
T  2479 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 2576  T
Q  247 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    ||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2577 agaagaaaacaataaacacaaaaagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtact 2655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 47 - 325
Target Start/End: Complemental strand, 6667 - 6390
Alignment:
Q  47 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 146  Q
    |||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  6667 tgttgtgaatccccgagtctccaagacc-ggatcgaaccacaccaatacaaagaataatgatatgtggagcgacggagagtggtaaccaccaaacaaagt 6569  T
Q  147 ttattgagcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat-aaacaaggagatgg 245  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  6568 ttattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagataaaacaaggagaggg 6469  T
Q  246 aagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagtttgtact 325  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6468 aagaagaaaacaat-aacacaaagagattggtcacccagttcggtccaaacttaacctactctggaggagagtttgtact 6390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 91 - 317
Target Start/End: Original strand, 3545 - 3769
Alignment:
Q  91 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaat 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  3545 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaat 3644  T
Q  191 ctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggt 290  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  3645 ctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggt 3742  T
Q  291 ccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||||||||||||||    
T  3743 ccaaacttgacctactctggaggagag 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 91 - 306
Target Start/End: Complemental strand, 214 - 1
Alignment:
Q  91 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatctaat 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  214 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaat 115  T
Q  191 ctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatgaaaacaataaacacaaagagattggtcacccagttcggt 290  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  114 ctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggt 17  T
Q  291 ccaaacttgacctact 306  Q
    ||||||||||||||||    
T  16 ccaaacttgacctact 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 11044 - 11204
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  ||||||||| || ||| |||||||||||  |||||| |||||| |    
T  11044 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaaacacaaacca-caagcacaagataaa--aggagagggaagagg 11140  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  11141 aaaacaa-agacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagag 11204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 8618 - 8778
Alignment:
Q  154 gcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagatggaagatg 251  Q
    |||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  || ||| |||||| |    
T  8618 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--agaagagggaagagg 8714  T
Q  252 aaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    ||||||| | |||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8715 aaaacaa-agacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagag 8778  T

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Target: scaffold0286 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 11737 - 11682
Alignment:
Q  262 acacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11737 acaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 11682  T

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Target: scaffold1519 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 1087 - 1040
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1087 agattgttcacccagttcggtccaaacttgacctactctggaggagag 1040  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 434703 - 434658
Alignment:
Q  272 attggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  434703 attgttcacccagttcggtccaaacttgacctactctggaggagag 434658  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 18007 - 18047
Alignment:
Q  277 tcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  18007 tcacccagttcgatccaaacttgacctaccctggaggagag 18047  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 114774 - 114727
Alignment:
Q  270 agattggtcacccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||| ||| ||||||||||| |||||| ||||||||||||||||||    
T  114774 agattgttcatccagttcggtctaaacttaacctactctggaggagag 114727  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 10651 - 10614
Alignment:
Q  279 acccagttcggtccaaacttgacctactctggaggagag 317  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  10651 acccagttcggtccaa-cttgacctactctggaggagag 10614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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