View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1312_high_2 (Length: 527)
Name: NF1312_high_2
Description: NF1312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1312_high_2 |
| |
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[»] scaffold0003 (1 HSPs) |
| | |
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[»] scaffold0349 (1 HSPs) |
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[»] scaffold0277 (2 HSPs) |
| | |
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[»] scaffold0419 (1 HSPs) |
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[»] scaffold0019 (1 HSPs) |
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[»] scaffold0038 (4 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 470; Significance: 0; HSPs: 54)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 26143673 - 26144170
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26143673 |
tcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaggaagatctccttttaagaacagttaaa |
26143772 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26143773 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
26143872 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
26143873 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagggtcatcattaccactcgtgataaacacttactagcctgtcatgg |
26143972 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26143973 |
gattacaagtacacatgcagtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
26144072 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26144073 |
gaagaaattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
26144170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 25483864 - 25484361
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagat-ctccttttaagaacagttaa |
99 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| || || |||||| |
|
|
T |
25483864 |
tcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaa-aagatgctcctttcaaaaatagttaa |
25483962 |
T |
|
Q |
100 |
attgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaa |
199 |
Q |
|
|
||| || |||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
25483963 |
atttgacggtaagttagaagatgttagtgagggaataccaatcataaaggaaagactatctagaaagaagattcttttgattgttgatgatgttgacaaa |
25484062 |
T |
|
Q |
200 |
ctggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatg |
299 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
25484063 |
ctggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaacacttactagcctgtcatg |
25484162 |
T |
|
Q |
300 |
ggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagtta |
399 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
25484163 |
ggattacaagtacacatgcagtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagtta |
25484262 |
T |
|
Q |
400 |
tgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
25484263 |
tgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
25484361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 25580527 - 25581024
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||| | |||||||||||| || ||||||| |
|
|
T |
25580527 |
tcaatttgaaggtgtatgttttcttcataatgtcagagagatttcaattcttaataacttgaaacatctccattattatctccttttaataatagttaaa |
25580626 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
25580627 |
ttttactttaagttagtagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgatttttgatgatgttgacaaac |
25580726 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
25580727 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagtgtcatcattaccactcgtgataaacacttactagcctgtcatgg |
25580826 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
25580827 |
gattacaagtacacatgcagtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaatttat |
25580926 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
25580927 |
gaagagattttaaaccgtgtagttacttatgcatctgggctgcccttagcaatagtaacaataggggataatttgtttggaaggaaggtagaagattg |
25581024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 25539348 - 25539845
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | | ||||||| || || ||||||| |
|
|
T |
25539348 |
tcaatttgaagttgtatgttttcttcataatgtcagagagaattcaagtcataataacttgaaacatctccaaaagaagctcctttcaaaaatagttaaa |
25539447 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|| || |||||||| |||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
25539448 |
tttgacggtaagttagaagatgttagtgagggaataacaatcataaaggaaagactatctaaaaagaagattcttttgattcttgatgatgttgacaaac |
25539547 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||| |
|
|
T |
25539548 |
tagagcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcattaccactcgtgatacacatttattagcctgtcatgg |
25539647 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
T |
25539648 |
gattacaagtacacatgtagtaaaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcgtttaaaaatgacaaagttccttcgagttat |
25539747 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
25539748 |
gaagagattttaaaccgtgtagttacttatgcatctggcctacccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
25539845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 25511697 - 25512193
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||| || |||||||||||||| | | ||||||| || || ||||||| |
|
|
T |
25511697 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaatagttaaa |
25511796 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|| || | || ||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
25511797 |
tttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgttgacaaac |
25511896 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
25511897 |
tggagcagctagaggctttggctggaggacttgactggttcggtcctggaagcagagtcatcattaccactcgtgataaacacttactagcctgtcatgg |
25511996 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
25511997 |
-attacaagtacacatgcagtagaagggttgaatgagatagaagctcttattttgttgaggcgaatggcttttaaacatgacaaagttccttcaagttat |
25512095 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
25512096 |
gaagagattttaaaccgtgtagttacttatgcatctggccttccgttagctatagtaacaataggggccaatttgtttggaaggaaggtagaagattg |
25512193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 26056727 - 26057224
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||| || ||| || |||||||||||||| | | ||||||| || || ||||||| |
|
|
T |
26056727 |
tcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaatagttaaa |
26056826 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|| || | |||||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
26056827 |
tttgacggtcagttagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgttgacaaac |
26056926 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||||| |
|
|
T |
26056927 |
tggagcagctagacgctttggctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcgtgataaacgcttactagcctatcatgt |
26057026 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
T |
26057027 |
gaatacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattattgagccgaaatgcttttaaaaatgacaaagttccttcaagttat |
26057126 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
26057127 |
gaagatattttaaaccgtgtagttacttatgcatctggccttccgttagctatagtaacaataggggccaatttgattggaaggaaggtagaagattg |
26057224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 26076697 - 26077194
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||| || ||| || |||||||||||||| | | ||||||| || || ||||||| |
|
|
T |
26076697 |
tcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaatagttaaa |
26076796 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|| || | || ||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
26076797 |
tttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgttgacaaac |
26076896 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||||| |
|
|
T |
26076897 |
tggagcagctagacgctttggctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcgtgataaacgcttactagcctatcatgt |
26076996 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
T |
26076997 |
gaatacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattattgagccgaaatgcttttaaaaatgacaaagttccttcaagttat |
26077096 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
26077097 |
gaagatattttaaaccgtgtagttacttatgcatctggccttccgttagctatagtaacaataggggccaatttgattggaaggaaggtagaagattg |
26077194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 26647284 - 26647732
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| | || ||||||| || |||||||||| |
|
|
T |
26647284 |
tcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggagctcctttcaaaaacagttaaa |
26647383 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||||| |||||| ||| || || ||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| || ||| |
|
|
T |
26647384 |
gtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgttaaccaac |
26647483 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||||| |||||||||| |
|
|
T |
26647484 |
tggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgg |
26647583 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| ||| ||| |||||||| |||| | ||| ||||||||||||||||||||||||| | ||||| ||||| ||| ||||||| || |||||||| |
|
|
T |
26647584 |
gatagaaagaacatatgcagtaagagggctatatgggacagaagctcttgaattgttgaggtggatggcgtttaagaataacaaagtaccgccaagttat |
26647683 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| |||||||||||| |||| | ||||| || ||||| ||||||| |
|
|
T |
26647684 |
gaagacgttttaaaccgtgcagtttcatatgcttcaggccttcccttag |
26647732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 26753252 - 26753700
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| | || ||||||| || |||||||||| |
|
|
T |
26753252 |
tcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggagctcctttcaaaaacagttaaa |
26753351 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||||| |||||| ||| || || ||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| || ||| |
|
|
T |
26753352 |
gtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgttaaccaac |
26753451 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||||| |||||||||| |
|
|
T |
26753452 |
tggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgg |
26753551 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| ||| ||| |||||||| |||| | ||| ||||||||||||||||||||||||| | ||||| ||||| ||| ||||||| || |||||||| |
|
|
T |
26753552 |
gatagaaagaacatatgcagtaagagggctatatgggacagaagctcttgaattgttgaggtggatggcgtttaagaataacaaagtaccgccaagttat |
26753651 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| |||||||||||| |||| | ||||| || ||||| ||||||| |
|
|
T |
26753652 |
gaagacgttttaaaccgtgcagtttcatatgcttcaggccttcccttag |
26753700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 26884875 - 26885312
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| ||||||||||||| ||||| ||||| |||||||||| ||||||||| |||||||||||||||| || |||||||||| |||| ||||| |
|
|
T |
26884875 |
tcaatttgaatgtgtatgttttctgcataaagtcagggagaattcaactcataataacttgaaacatctccaggaggaactccttttaaaaacaattaaa |
26884974 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|| ||| |||||||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26884975 |
ttaaacattaagttaggagatgttagtgagggaattccactcataaaggaaagactacatagaaagaagattcttttgattcttgatgatgttgacaaaa |
26885074 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||| | || ||| | |
|
|
T |
26885075 |
tggagcagctagaggctttggctggaggacttgattggtttggtcgtggaagcagggtcatcattaccactcgtgataaacacttactaacgtgccatag |
26885174 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
| | || ||| ||| |||||||||| | ||| || ||||||| |||||||||||||| | |||| |||||| ||||||||||||| | ||||| |
|
|
T |
26885175 |
ggtagatagaacatatgaagtagaagggatatatgggaaagaagcttttgaattgttgaggtggctggcctttaaa---gacaaagttcctttaggttat |
26885271 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||||||||||||||||| |||| | ||||| || ||||| |
|
|
T |
26885272 |
gaagagattttaaaccgtgcagtttcatatgcttcgggcct |
26885312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 26656770 - 26657215
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| || ||||||| || ||| |||| | |
|
|
T |
26656770 |
tcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggaggagctcctttcaaaaactgttaga |
26656869 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
26656870 |
gtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttttgattctcgatgatgttgacaaac |
26656969 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||| ||| |||||| || |
|
|
T |
26656970 |
tggagcagctagaggctttggcaggaggacttgattggttcggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacgg |
26657069 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| || ||| |||| ||| ||||| | ||| ||||||||| |||||||||||||| | |||||||||| | ||||| ||||||||| ||||| |
|
|
T |
26657070 |
gatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttat |
26657166 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| ||||||| ||||| |||| | ||||| || || || ||||||| |
|
|
T |
26657167 |
gaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
26657215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 26762741 - 26763186
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| || ||||||| || ||| |||| | |
|
|
T |
26762741 |
tcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggaggagctcctttcaaaaactgttaga |
26762840 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
26762841 |
gtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttttgattctcgatgatgttgacaaac |
26762940 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||| ||| |||||| || |
|
|
T |
26762941 |
tggagcagctagaggctttggcaggaggacttgattggttcggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacgg |
26763040 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| || ||| |||| ||| ||||| | ||| ||||||||| |||||||||||||| | |||||||||| | ||||| ||||||||| ||||| |
|
|
T |
26763041 |
gatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttat |
26763137 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| ||||||| ||||| |||| | ||||| || || || ||||||| |
|
|
T |
26763138 |
gaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
26763186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 26862385 - 26862825
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| ||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||| | || || ||||||| |||||||||| |
|
|
T |
26862385 |
tcaatttgaaggtgtatgttttcttcataaagttagagagaattcaactcataatagcttgaaacatctccagaaggagcttcttttaaaaacagttaaa |
26862484 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
|||||| |||||||||||||| ||||||||||||| || | || |||||||||||| ||||| |||||||||||||||||| |||||||||||||||| |
|
|
T |
26862485 |
ttgaacattaagttaggagatgctagtgagggaattccacttataaaggaaagactaaatagaatgaagattcttttgattctcgatgatgttgacaaac |
26862584 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||| | || ||||| |
|
|
T |
26862585 |
tggaacagctagaggcattagctggaggacttgattggtttggtcatggaagtagagtcatcattaccactcgagataaacacttactaacatgccatgg |
26862684 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| ||| ||| |||| ||| | ||| | |||||||||||||| |||||||||||||| | |||||||||||||||| |||||||||| |||||| |
|
|
T |
26862685 |
gatagaaagaacatatgcggtaaacgggctacatgagacagaagcttttgaattgttgaggtggatggcttttaaaaatggtgaagttccttcgagttat |
26862784 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
| || |||||||||||| |||| | ||||| || ||||| |
|
|
T |
26862785 |
aacgatgttttaaaccgtgcagttgcatatgcttccggcct |
26862825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 60 - 485
Target Start/End: Complemental strand, 27530619 - 27530197
Alignment:
Q |
60 |
tgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatc |
159 |
Q |
|
|
||||||||||||| || | |||||||||| |||||||| |||| || ||||||||||| ||||||| |||||||| ||||||||||| |||| |||| |
|
|
T |
27530619 |
tgaaacatctccaagagaaactccttttaaaaacagttagattggacattaagttaggaggtgttagtcagggaattccaatcattaagcaaaggctatg |
27530520 |
T |
|
Q |
160 |
tagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtc |
259 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| || |||||| |
|
|
T |
27530519 |
tagaaagaagattcttttgattcttgatgatgttgacaaactggatcagctagaggccttggctggaggacttgattggttcggtcctgggagtagagtc |
27530420 |
T |
|
Q |
260 |
atcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttga |
359 |
Q |
|
|
|||||||| ||||| | || ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
T |
27530419 |
atcattactactcgaaacaaacacttactaaagattcatgggatagaaagtacacatgcagtagaagggttgaatgcgacagaagctctcgaattgttga |
27530320 |
T |
|
Q |
360 |
ggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaac |
459 |
Q |
|
|
|| | |||||||| ||| || || |||||||||||| ||||||| ||||||||||||| | |||||||||| |||||||| || ||||| || |||| |
|
|
T |
27530319 |
ggtggatggctttcaaa---gaaaatgttccttcaagtcatgaagacattttaaaccgtgcacttacttatgcttctggccttccattagctattgtaat |
27530223 |
T |
|
Q |
460 |
aatagggggcaatttgtttggaagga |
485 |
Q |
|
|
||||||| ||||||| ||||||||| |
|
|
T |
27530222 |
aatagggtccaatttggttggaagga |
27530197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 1 - 424
Target Start/End: Complemental strand, 27337472 - 27337049
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| | ||||| |||||||||||||| |||||||||||| || ||| || |||||||||||||| | || ||||||| || ||||||| || |
|
|
T |
27337472 |
tcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaaggagctcctttcaaaaacagttcaa |
27337373 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||||| ||||||| |||||||| |||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||| ||| |
|
|
T |
27337372 |
ctgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattcttttgattctcgatgatgttgaccaac |
27337273 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||||| |||||||||| |
|
|
T |
27337272 |
tggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgg |
27337173 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| ||| ||| |||||||| |||| | ||| || ||||||||||||||||||||| | | ||||||||| ||| ||||||| || |||||||| |
|
|
T |
27337172 |
gatagaaagaacatatgcagtaagagggctatatgggaaggaagctcttgaattgttgaggtggacggcttttaagaataacaaagtaccgccaagttat |
27337073 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagtt |
424 |
Q |
|
|
||||| |||||||||||| |||| |
|
|
T |
27337072 |
gaagatgttttaaaccgtgcagtt |
27337049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 1 - 424
Target Start/End: Complemental strand, 27398212 - 27397789
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| | ||||| |||||||||||||| |||||||||||| || ||| || |||||||||||||| | || ||||||| || ||||||| || |
|
|
T |
27398212 |
tcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaaggagctcctttcaaaaacagttcaa |
27398113 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||||| ||||||| |||||||| |||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||| ||| |
|
|
T |
27398112 |
ctgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattcttttgattctcgatgatgttgaccaac |
27398013 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||||| |||||||||| |
|
|
T |
27398012 |
tggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtcatgg |
27397913 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| ||| ||| |||||||| |||| | ||| || ||||||||||||||||||||| | | ||||||||| ||| ||||||| || |||||||| |
|
|
T |
27397912 |
gatagaaagaacatatgcagtaagagggctatatgggaaggaagctcttgaattgttgaggtggacggcttttaagaataacaaagtaccgccaagttat |
27397813 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagtt |
424 |
Q |
|
|
||||| |||||||||||| |||| |
|
|
T |
27397812 |
gaagatgttttaaaccgtgcagtt |
27397789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 15 - 441
Target Start/End: Original strand, 31285378 - 31285804
Alignment:
Q |
15 |
tatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtt |
114 |
Q |
|
|
|||||||||||||| |||| |||||||||||| | | ||||| ||||||||||||| || | |||||||| | |||| || |||| | |||||| |
|
|
T |
31285378 |
tatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagtt |
31285477 |
T |
|
Q |
115 |
aggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagag |
214 |
Q |
|
|
|| ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || | || || | |
|
|
T |
31285478 |
agaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgttgacaatatgaatcaactgcat |
31285577 |
T |
|
Q |
215 |
gctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacac |
314 |
Q |
|
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || || ||||||||| |||||||||| | |||||||| |
|
|
T |
31285578 |
gctttggctggaggacttgattggttcggccgtggaagcagagtcatcattaccactcgagacaaacacttactaagtagtcatgggataaaaagtacac |
31285677 |
T |
|
Q |
315 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaa |
414 |
Q |
|
|
||||||||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| |||||||||||||||| |||| ||||| |||||||| |
|
|
T |
31285678 |
atgcagtagaagggttgaatgggactgaagctcttgaattgttaaggtggatggcttttaaaagtgacaaagttccttcaggttacgaagacattttaaa |
31285777 |
T |
|
Q |
415 |
ccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| |||| | ||| | |||||||| |
|
|
T |
31285778 |
ccgtgcagttgcatattcttctggcct |
31285804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 109 - 455
Target Start/End: Complemental strand, 27592290 - 27591944
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
|||||||||| |||||| || |||||| | | || |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
T |
27592290 |
taagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaagattcttttgattcttgatgatgttgacaaactggatcag |
27592191 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| |||||||||| |||||||||||| || |
|
|
T |
27592190 |
ctagatgctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaa |
27592091 |
T |
|
Q |
309 |
gtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagat |
408 |
Q |
|
|
||| |||||||||||| |||||||| ||||||||||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||| || |
|
|
T |
27592090 |
aaacatatgcagtagaagagttgaatgggacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacat |
27591991 |
T |
|
Q |
409 |
tttaaaccgtgtagttacttatgcatctggcctgcccttagcaatag |
455 |
Q |
|
|
|||||| |||| |||| ||||| |||||||| || ||||| |||| |
|
|
T |
27591990 |
tttaaagcgtgcagttgtatatgcttctggccttccattagcgatag |
27591944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 109 - 441
Target Start/End: Complemental strand, 27426881 - 27426549
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
|||||||| |||||| ||||||||||| |||||||| |||||||| | | |||||||||||||||||||||||| ||||| |||||||| || |||| |
|
|
T |
27426881 |
taagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatgacgttgacaatatgaagcaa |
27426782 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
|| | ||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||| || ||||| ||||||||||||||||||| ||| || |
|
|
T |
27426781 |
ctgaatgctttggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaa |
27426682 |
T |
|
Q |
309 |
gtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagat |
408 |
Q |
|
|
||| |||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
27426681 |
aaacatatgcagtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagat |
27426582 |
T |
|
Q |
409 |
tttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||| || ||||||||| ||||||| |||||||| |
|
|
T |
27426581 |
tttgaatcgtgtagttgcttatgcttctggcct |
27426549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 109 - 455
Target Start/End: Complemental strand, 27676889 - 27676543
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
|||||||||| |||||| || |||||| | | || |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
T |
27676889 |
taagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaagattcttttgattcttgatgatgttgacaaactggatcag |
27676790 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
|||||||||||||||||| |||| |||||||| |||| |||||||||||||||||| ||||| || ||||| |||||||||| |||||||||||| || |
|
|
T |
27676789 |
ctagaggctttggctggaagactcgattggtttggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaa |
27676690 |
T |
|
Q |
309 |
gtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagat |
408 |
Q |
|
|
||| |||||||||||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||| || |
|
|
T |
27676689 |
aaacatatgcagtagaagagttgaatgagacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacat |
27676590 |
T |
|
Q |
409 |
tttaaaccgtgtagttacttatgcatctggcctgcccttagcaatag |
455 |
Q |
|
|
|||||| |||| |||| ||||| |||||||| || ||||| |||| |
|
|
T |
27676589 |
tttaaagcgtgcagttgtatatgcttctggccttccattagcgatag |
27676543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 16 - 441
Target Start/End: Complemental strand, 27717861 - 27717436
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa-ttgaaccataagtt |
114 |
Q |
|
|
|||||||||| | ||||| ||||||||||||| | |||||| |||||||||| ||| | || |||||||||| |||| || || ||||| |||||| |
|
|
T |
27717861 |
atgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcagaaggagctccttttaaaaacacttcaacttgaaat-taagtt |
27717763 |
T |
|
Q |
115 |
aggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagag |
214 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| ||| |||||||||| |||||||||||||||||||||||||||| || |||| ||| | |
|
|
T |
27717762 |
tggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacat |
27717663 |
T |
|
Q |
215 |
gctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacac |
314 |
Q |
|
|
|||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||| || || ||||||||| ||||||||||||| | ||||| | |
|
|
T |
27717662 |
gctttggctggaggacctgattggttcggccgtggaagcaaagtcatcattaccactcgagacaaacacttactaacctgtcatgggataaaaagtatgc |
27717563 |
T |
|
Q |
315 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaa |
414 |
Q |
|
|
||| ||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||| |||| |||||||||||||| |
|
|
T |
27717562 |
atgaagtagaagggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccttcaggttacgaagagattttaaa |
27717463 |
T |
|
Q |
415 |
ccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| |||| | ||||| |||||||| |
|
|
T |
27717462 |
ccgtgcagttgcatatgcttctggcct |
27717436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 120 - 441
Target Start/End: Original strand, 27679874 - 27680195
Alignment:
Q |
120 |
atgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggcttt |
219 |
Q |
|
|
||||||||||||||||| || |||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||||| || |||| || | ||||| |
|
|
T |
27679874 |
atgttagtgagggaattccagtcataaaggaaagattatgtagaaagaagattcttttgattctcgatgatgttgacaatttgaagcaactgcatgcttt |
27679973 |
T |
|
Q |
220 |
ggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgca |
319 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |||||||| | ||||||| || ||||||||||||| |
|
|
T |
27679974 |
ggctggaggacttgattggttcggatgtggaagcagagtcatcattaccactcgaaacaaagacttactaagcagtcatggcatagaaagtacacatgca |
27680073 |
T |
|
Q |
320 |
gtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtg |
419 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||| |||| ||||| ||||||||||||| |
|
|
T |
27680074 |
gtagaagggttgaatgagacagaagctcttgaattgttgaggtggatggcttttaaaagtgataaagttccttcaggttacgaagacattttaaaccgtg |
27680173 |
T |
|
Q |
420 |
tagttacttatgcatctggcct |
441 |
Q |
|
|
|||| | ||||| | |||||| |
|
|
T |
27680174 |
cagttgcatatgcttttggcct |
27680195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 26624076 - 26624516
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| || |||||||||||||| |||| |||||||||||| ||| ||||| ||||||||||||| || | |||||||| | |||| | | |
|
|
T |
26624076 |
tcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaacaactgga |
26624175 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||| | |||||| | |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |||| |
|
|
T |
26624176 |
ttggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgtagacagta |
26624275 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
| ||| || || |||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||| | || ||| ||||| | |||||| |
|
|
T |
26624276 |
taaggcaactggatgctttggctggagggcttgattggttcggacgtggaagcagggtcataattaccactcgaaacaaacacctactaagcactcatgg |
26624375 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| | ||| ||||||||||||||||||||| ||| |||||| | || ||||||||||||| | ||||||||||||| |||||||||||||||| ||||| |
|
|
T |
26624376 |
gataaaaagcacacatgcagtagaagggttgtatgggacagacggtcatgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttat |
26624475 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| ||||||||||||| |||| | ||||| |||||||| |
|
|
T |
26624476 |
gaagacattttaaaccgtgcagttgcatatgcttctggcct |
26624516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 26730053 - 26730493
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| || |||||||||||||| |||| |||||||||||| ||| ||||| ||||||||||||| || | |||||||| | |||| | | |
|
|
T |
26730053 |
tcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaacaactgga |
26730152 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||| | |||||| | |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |||| |
|
|
T |
26730153 |
ttggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgtagacagta |
26730252 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
| ||| || || |||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||| | || ||| ||||| | |||||| |
|
|
T |
26730253 |
taaggcaactggatgctttggctggagggcttgattggttcggacgtggaagcagggtcataattaccactcgaaacaaacacctactaagcactcatgg |
26730352 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| | ||| ||||||||||||||||||||| ||| |||||| | || ||||||||||||| | ||||||||||||| |||||||||||||||| ||||| |
|
|
T |
26730353 |
gataaaaagcacacatgcagtagaagggttgtatgggacagacggtcatgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttat |
26730452 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| ||||||||||||| |||| | ||||| |||||||| |
|
|
T |
26730453 |
gaagacattttaaaccgtgcagttgcatatgcttctggcct |
26730493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 120 - 413
Target Start/End: Complemental strand, 27697844 - 27697551
Alignment:
Q |
120 |
atgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggcttt |
219 |
Q |
|
|
|||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||| |
|
|
T |
27697844 |
atgttagtgacggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgacgatgttgacaaactggatcagctacaggcttt |
27697745 |
T |
|
Q |
220 |
ggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgca |
319 |
Q |
|
|
|||||||||||| |||||||| |||| |||||||||||||||||| ||||| || ||||| |||||||||| | ||||||||| || || ||||| |
|
|
T |
27697744 |
ggctggaggactcgattggtttggtcctggaagcagagtcatcatcaccacccgagataaacacttactagaccatcatgggatagaaaaaacgtatgca |
27697645 |
T |
|
Q |
320 |
gtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaa |
413 |
Q |
|
|
||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||| ||||| || |||||||||||| |
|
|
T |
27697644 |
gtaaaagggttgaatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccatcaaggtacaaagagattttaa |
27697551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 16 - 441
Target Start/End: Complemental strand, 27610482 - 27610057
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa-ttgaaccataagtt |
114 |
Q |
|
|
|||||||||| | ||||| ||||||||||||| | |||||| |||||||||| ||||| || |||||||||| |||| || || ||||| |||||| |
|
|
T |
27610482 |
atgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcaggaggagctccttttaaaaacacttcaacttgaaat-taagtt |
27610384 |
T |
|
Q |
115 |
aggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagag |
214 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| ||| |||||||||| |||||||||||||||||||||||||||| || |||| ||| | |
|
|
T |
27610383 |
tggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacat |
27610284 |
T |
|
Q |
215 |
gctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacac |
314 |
Q |
|
|
|||||||||||||||| |||||||||||| | |||||||| |||||||||| ||||||| || || ||||| ||| ||||||||||||| | ||||| | |
|
|
T |
27610283 |
gctttggctggaggacctgattggttcggccgtggaagcaaagtcatcattgccactcgagacaaacacttgctaacctgtcatgggataaaaagtatgc |
27610184 |
T |
|
Q |
315 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaa |
414 |
Q |
|
|
|| ||| |||||| || ||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||| |||| |||||||||||||| |
|
|
T |
27610183 |
ataaagtggaagggctgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccttcaggttacgaagagattttaaa |
27610084 |
T |
|
Q |
415 |
ccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| ||| | ||||| |||||||| |
|
|
T |
27610083 |
ccgtgctgttgcatatgcttctggcct |
27610057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 121 - 482
Target Start/End: Complemental strand, 25492576 - 25492215
Alignment:
Q |
121 |
tgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttg |
220 |
Q |
|
|
|||||||||||||||| ||||||| || || |||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |
|
|
T |
25492576 |
tgttagtgagggaattgcaatcataaaacaaggactatgtagagagaagattcttttgattctcgatgatgttgacagactggagcagctagaggatttg |
25492477 |
T |
|
Q |
221 |
gctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcag |
320 |
Q |
|
|
|||| |||||||||||||||||||| ||||||| |||| |||||||||||||| || || ||| ||||| || |||||||||| ||||| ||||||| |
|
|
T |
25492476 |
gctgaaggacttgattggttcggtcgtggaagcggagttatcattaccactcgagacaaacacatactaaccagtcatgggatagaaagtatgcatgcag |
25492377 |
T |
|
Q |
321 |
tagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgt |
420 |
Q |
|
|
|||||| |||| ||| | |||||||||||||||| | | | | ||||||||||||||||||| ||||||||||| ||||||||| ||||||| | || |
|
|
T |
25492376 |
tagaagagttgcatggggaagaagctcttgaattgcttatgtggatggcttttaaaaatgacagagttccttcaatttatgaagacattttaacacttgc |
25492277 |
T |
|
Q |
421 |
agttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaa |
482 |
Q |
|
|
| |||| ||||| |||||||| || ||||| |||||| ||||||| ||||||||||||| |
|
|
T |
25492276 |
aattacctatgcttctggccttccattagctttagtaataatagggtcaaatttgtttggaa |
25492215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 26803251 - 26803699
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| || |||||||||||||| |||| |||||||||||| ||| ||||| ||||||||||||| || | || ||| ||| |||| | | |
|
|
T |
26803251 |
tcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactgga |
26803350 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||| | |||||| ||||||||||||||||| |||||||||||| | |
|
|
T |
26803351 |
ttgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgttgacgata |
26803450 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
||||||| ||| | |||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||||| || || || ||||| || |||||| |
|
|
T |
26803451 |
tggagcaactacatgctttggctggaggacctgattggtttggccatggaagcagggtcatcattaccactcgagacaaacatttactgaccagtcatga |
26803550 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
|| ||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||||| | ||||||||||||||| ||||||| |||||||||||| |
|
|
T |
26803551 |
tatagaaagaacatatgcagtagaggggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaaataacaaagtaccttcaagttat |
26803650 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| |||||||| |||| |||| | ||||| || || || ||||||| |
|
|
T |
26803651 |
gaagacattttaaatcgtgcagtttcatatgcttcaggtcttcccttag |
26803699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 16 - 449
Target Start/End: Original strand, 28787058 - 28787491
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||||||||| | |||||||||| |||| || || |||| ||||||| |
|
|
T |
28787058 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggtgctccttttaaaaacacttcaactgaaaattaagtta |
28787157 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| || || |||||||| |||||||||||| |||||||||||| | || |||| ||| | | |
|
|
T |
28787158 |
ggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgttgacgatatgaagcaactacatg |
28787257 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
||||||| ||||||| |||||||||||| | ||||||||| ||||||||||| ||||| || || ||||||||| |||||||||| ||||||||| |
|
|
T |
28787258 |
ctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattacgactcgagacaaacacttactaagaagtcatgggatagaaagtacaca |
28787357 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
|| ||| ||||| || ||| ||||||||||||||| |||||||| | ||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |
|
|
T |
28787358 |
tgaagtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaat |
28787457 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
|||| |||| ||||||| || ||||| ||||||| |
|
|
T |
28787458 |
cgtgcagtttcttatgcttcgggccttcccttag |
28787491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 60 - 449
Target Start/End: Original strand, 28793223 - 28793612
Alignment:
Q |
60 |
tgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatc |
159 |
Q |
|
|
|||||||||||||||| | |||||||||| |||| || || |||| ||||||||||| |||||||||||||||| | || |||||||| ||| |
|
|
T |
28793223 |
tgaaacatctccaggaggtgctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctaca |
28793322 |
T |
|
Q |
160 |
tagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtc |
259 |
Q |
|
|
|| ||||||||||||||||||||| |||||||||||| | || |||| ||| | |||||||| ||||||| |||||||||||| | ||||||||| ||| |
|
|
T |
28793323 |
tacaaagaagattcttttgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtc |
28793422 |
T |
|
Q |
260 |
atcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttga |
359 |
Q |
|
|
|||||||| ||||| || || ||||||||| |||||||||| ||||||||||| ||| ||||| || ||| ||||||||||||||| ||||||| |
|
|
T |
28793423 |
atcattacgactcgagacaaacacttactaagaagtcatgggatagaaagtacacatgaagtgaaagggctgtatgggacagaagctcttgagttgttga |
28793522 |
T |
|
Q |
360 |
ggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
| | ||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |||| |||| | ||||| || ||||| ||||||| |
|
|
T |
28793523 |
gatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgtgcagtttcgtatgcttcgggccttcccttag |
28793612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 108 - 498
Target Start/End: Original strand, 27215364 - 27215754
Alignment:
Q |
108 |
ataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagca |
207 |
Q |
|
|
|||||||||||| |||||||||||| ||| ||| || || ||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
27215364 |
ataagttaggaggtgttagtgaggggattacaaagataaaaaaaatgctatgtcaaaagaagattcttttgattcttgatgatgttgacaaactagagca |
27215463 |
T |
|
Q |
208 |
gctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattaca |
307 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||| | | || |||||| ||| ||||||||| | |
|
|
T |
27215464 |
gctagaggctttggctggaggacttgattggtttggtggtggaagtagagtcatcattacgactcgaaacagacagttactaacctatcatgggatagaa |
27215563 |
T |
|
Q |
308 |
agtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagaga |
407 |
Q |
|
|
|| ||| ||| || | |||| |||||||| | ||||||||||| ||||| |||||||||| ||||||||||||||||||||| | |
|
|
T |
27215564 |
agattgcatcacgtaagcggtctatatgacgaagaagctcataaattgttgaggttgatggcatttaaaaatggtgaagttccttcaagttatgaaggca |
27215663 |
T |
|
Q |
408 |
ttttaaaccgtgtagttacttatgcatctggcctgcccttagcaatagtaacaatagggggcaatttgtttggaaggaaggtagaagattg |
498 |
Q |
|
|
|||| || |||| | ||||||||| |||||||| || ||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
T |
27215664 |
tttttaatcgtgcacttacttatgtttctggccttccattagctatagtaacaatagggtccaatttgtttggaaggagtgtagaagattg |
27215754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 109 - 449
Target Start/End: Original strand, 26824732 - 26825072
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
||||||||||| ||||||| | || ||| |||||| || || |||||| |||||||| ||||| ||||||| ||||| |||||||||||||||| |
|
|
T |
26824732 |
taagttaggaggtgttagtcaaggtattcaaatcataaaagatagactacgcagaaagaaagttcttctgattctcgatgacattgacaaactggagcaa |
26824831 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||| || || || ||||| || ||||| || || || |
|
|
T |
26824832 |
ctagatgctttggctggaggatttgattggttcggtaatggcagcagagtcatcattacaactcgagacaaacaattacttaccaatcatgaga-tagaa |
26824930 |
T |
|
Q |
309 |
gt-acacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagaga |
407 |
Q |
|
|
| | ||| ||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||||||||||| ||||||| || |||||||||||| | | |
|
|
T |
26824931 |
ttaatgtatgaagtagaagggttgtatgggacagaagctcttgaattgttaaggtggatggcttttaaaaataacaaagtaccgtcaagttatgaacaca |
26825030 |
T |
|
Q |
408 |
ttttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
|||||||||||| |||| | ||||| || ||||| ||||||| |
|
|
T |
26825031 |
ttttaaaccgtgcagtttcatatgcttcgggccttcccttag |
26825072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 27604066 - 27603633
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa-ttgaaccataagtt |
114 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||||||||| || |||||||||| |||| || || ||||| |||||| |
|
|
T |
27604066 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaacacttcaacttgaaat-taagtt |
27603968 |
T |
|
Q |
115 |
aggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagag |
214 |
Q |
|
|
||||| |||||||||||||||||| || |||||||| || | || |||||||||||||||||| |||||||||||| | ||| ||| ||| || |
|
|
T |
27603967 |
aggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaatgaagattcttttgattctcgatgatgttgacgatatggggcaactacag |
27603868 |
T |
|
Q |
215 |
gctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacac |
314 |
Q |
|
|
|||||||| |||| || ||||||||| || | ||||||||| ||||||||||||||||| || | ||||||||| || |||||| || ||| | |
|
|
T |
27603867 |
gctttggcaggagaacctgattggtttgggcttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaagt |
27603768 |
T |
|
Q |
315 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaa |
414 |
Q |
|
|
||||| ||||||||||| | ||||||||||||||||||||||||| | ||||||||||| ||| ||||||| |||||| ||||||||| ||||||| |
|
|
T |
27603767 |
atgcattagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgttttaaa |
27603668 |
T |
|
Q |
415 |
ccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| |||| | ||||| || || || ||||||| |
|
|
T |
27603667 |
ccgtgcagtttcatatgcttcaggacttcccttag |
27603633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 231 - 441
Target Start/End: Complemental strand, 27705401 - 27705191
Alignment:
Q |
231 |
ttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggtt |
330 |
Q |
|
|
|||||||||| || | |||||||||||| ||||| |||||||| |||| ||||||||||||| |||| |||| || ||| || ||||||||||||| |
|
|
T |
27705401 |
ttgattggtttggccctggaagcagagttatcatcaccactcgaaataaacacttactagcctctcataggatagaaaaaacatatccagtagaagggtt |
27705302 |
T |
|
Q |
331 |
gaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttat |
430 |
Q |
|
|
||||| || ||| |||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||| | ||| |
|
|
T |
27705301 |
gaatgggatagatgctcttgaattgttgaggtggatggcttttaaaaatgacaacgttccttcaggttatgaagacattttaaaccgtgcagttgcatat |
27705202 |
T |
|
Q |
431 |
gcatctggcct |
441 |
Q |
|
|
|| |||||||| |
|
|
T |
27705201 |
gcttctggcct |
27705191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 289
Target Start/End: Original strand, 28781921 - 28782194
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||||||||| || |||||||||| | || || || |||| ||||||| |
|
|
T |
28781921 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaagcacttcaactgaaaattaagtta |
28782020 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| || || |||||||| |||||||||||| |||||||||||| | ||||||| ||| | | |
|
|
T |
28782021 |
ggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgttgacgatatggagcaactacatg |
28782120 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttacta |
289 |
Q |
|
|
||||||| ||||||| |||||||||||| | ||||||||| ||||||||||||||||| || || ||||||||| |
|
|
T |
28782121 |
ctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttacta |
28782194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 109 - 273
Target Start/End: Original strand, 28326391 - 28326555
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
||||||||||||||| | ||| ||| || ||||||| ||| |||| || |||||||| |||| |||||||| ||||||||| || ||||| |||| |
|
|
T |
28326391 |
taagttaggagatgtcaatgatggagttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcgatgatgttcacgaactgaagcaa |
28326490 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcg |
273 |
Q |
|
|
| ||| ||||||||||||||||||||||||||||| ||| || ||||| ||| |||||||||| |
|
|
T |
28326491 |
ttgcaggttttggctggaggacttgattggttcggtcctggcagtagagtgatcgttaccactcg |
28326555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 109 - 273
Target Start/End: Original strand, 28504027 - 28504191
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
||||||||||||||| | ||| ||| || ||||||| ||| |||| || |||||||| |||| |||||||| ||||||||| || ||||| |||| |
|
|
T |
28504027 |
taagttaggagatgtcaatgatggagttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcgatgatgttcacgaactgaagcaa |
28504126 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcg |
273 |
Q |
|
|
| ||| ||||||||||||||||||||||||||||| ||| || ||||| ||| |||||||||| |
|
|
T |
28504127 |
ttgcaggttttggctggaggacttgattggttcggtcctggcagtagagtgatcgttaccactcg |
28504191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 27705781 - 27705586
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| || |||||||||||||| |||| |||||||||||| ||| ||| | ||||||||||||| || | || ||| ||| |||| | | |
|
|
T |
27705781 |
tcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaatgacttgaaacatctccaagagaagcttcttctaaaaacaactgga |
27705682 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgac |
196 |
Q |
|
|
| ||| ||||||| ||||| ||||||| ||| || |||| |||||||| || | |||||||||||||||||||||||| |||||||||||| |
|
|
T |
27705681 |
tcgaaaataaagttagatcatgtttgtgaggggattccattcataaaggaaaggctgtgtagaaagaagattcttttgattctcgatgatgttgac |
27705586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 162 - 361
Target Start/End: Original strand, 28182084 - 28182283
Alignment:
Q |
162 |
gaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcat |
261 |
Q |
|
|
|||||||| |||| |||||||| ||||||||| || ||||| |||| | ||| ||||||||||||| |||||||||| |||| ||| || | ||| || |
|
|
T |
28182084 |
gaaagaaggttctattgattctagatgatgttcacgaactgaagcaattgcaggttttggctggaggaattgattggtttggtcctggtagtaaagtgat |
28182183 |
T |
|
Q |
262 |
cattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgagg |
361 |
Q |
|
|
|||||||||||| || | || || |||| ||||||||||| ||| || ||| | |||| ||| ||||||| |||||||||||||||||||||| |
|
|
T |
28182184 |
cattaccactcgagacgaacaattgctagtaggtcatgggattgaaagagcatatgaaatagataagttaaatgagaaagaagctcttgaattgttgagg |
28182283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 361
Target Start/End: Original strand, 28235480 - 28235730
Alignment:
Q |
111 |
agttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagct |
210 |
Q |
|
|
||||||||||||| | |||||||||| ||||||| ||| |||| || |||||||| |||| |||||||| ||||||||| || |||| |||| | |
|
|
T |
28235480 |
agttaggagatgtcaatgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctagatgatgttcacgaactaaagcaatt |
28235579 |
T |
|
Q |
211 |
agaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagt |
310 |
Q |
|
|
||| |||||| |||| | |||||||||| |||| |||||| | ||| |||||||||||||| || || || || ||||| ||||||||||| ||| |
|
|
T |
28235580 |
gcaggttttggcgggagaaattgattggtttggtcctggaagtaaagtgatcattaccactcgagacaaacaattgctagcaagtcatgggattgaaaga |
28235679 |
T |
|
Q |
311 |
acacatgcagtagaagggttgaatgagacagaagctcttgaattgttgagg |
361 |
Q |
|
|
|| | | | |||| ||| ||||||| ||||||||||||||||||||| |
|
|
T |
28235680 |
acgtacgaaatagataagttaaatgagaacgaagctcttgaattgttgagg |
28235730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 273
Target Start/End: Original strand, 28227918 - 28228029
Alignment:
Q |
162 |
gaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcat |
261 |
Q |
|
|
||||||| |||| |||||||| ||||||||| ||||||| |||| | || |||||||||||||||||||||||| |||| |||||| | ||| || |
|
|
T |
28227918 |
gaaagaaagttctattgattctcgatgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttggtcctggaagtaaagtgat |
28228017 |
T |
|
Q |
262 |
cattaccactcg |
273 |
Q |
|
|
|||||||||||| |
|
|
T |
28228018 |
cattaccactcg |
28228029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 28240329 - 28240431
Alignment:
Q |
171 |
ttcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccac |
270 |
Q |
|
|
||||||||||||| ||| || | || ||||| |||| || ||| |||||||||||| |||||||||||| ||| || |||||||||||||||||||| |
|
|
T |
28240329 |
ttcttttgattctagataatatggatgaactgaagcaactgcagggtttggctggagggcttgattggttcagtcctgacagcagagtcatcattaccac |
28240428 |
T |
|
Q |
271 |
tcg |
273 |
Q |
|
|
||| |
|
|
T |
28240429 |
tcg |
28240431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 29477258 - 29477176
Alignment:
Q |
185 |
gatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattac |
267 |
Q |
|
|
|||||||| |||| ||| ||||| | ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||| |
|
|
T |
29477258 |
gatgatgtggacagactagagcaaatggaggctttggctggaggacttgattggtttggtcctggtagcagagttgtcattac |
29477176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 272
Target Start/End: Complemental strand, 28297009 - 28296846
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
||||||||||||||| | ||||||||| ||||||| ||| |||| || |||||||| || | |||||||| ||||||||| | ||||| |||| |
|
|
T |
28297009 |
taagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgttcatgaactgaagcaa |
28296910 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactc |
272 |
Q |
|
|
| | | |||||||||| ||||||||||||| |||| |||||| | ||| ||||||||||||| |
|
|
T |
28296909 |
ttgcaagttttggctggacgacttgattggtttggtcttggaagtaaagtgatcattaccactc |
28296846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 272
Target Start/End: Original strand, 28515064 - 28515227
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
||||||||||||||| | ||||||||| ||||||| ||| |||| || |||||||| || | |||||||| ||||||||| | ||||| |||| |
|
|
T |
28515064 |
taagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgttcatgaactgaagcaa |
28515163 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactc |
272 |
Q |
|
|
| | | |||||||||| ||||||||||||| |||| |||||| | ||| ||||||||||||| |
|
|
T |
28515164 |
ttgcaagttttggctggacgacttgattggtttggtcttggaagtaaagtgatcattaccactc |
28515227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 27664348 - 27664310
Alignment:
Q |
235 |
ttggttcggtcatggaagcagagtcatcattaccactcg |
273 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||| |
|
|
T |
27664348 |
ttggttcggtcaaggaagcagagtcatcattaccactcg |
27664310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 28140710 - 28140780
Alignment:
Q |
371 |
tttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||||||| | |||||| |||||||||||| | ||||||||||||| |||||||||||| |||||||| |
|
|
T |
28140710 |
tttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggcct |
28140780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 273
Target Start/End: Original strand, 28243778 - 28243872
Alignment:
Q |
179 |
attcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcg |
273 |
Q |
|
|
||||| ||||||||| || ||||| |||| | ||| ||| ||||||||||||||||||||||||| ||| || ||||| ||| |||||||||| |
|
|
T |
28243778 |
attctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcg |
28243872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 28490771 - 28490661
Alignment:
Q |
163 |
aaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatc |
262 |
Q |
|
|
|||||||||||||||| |||| |||||||||||||| ||||||| ||||||| | |||||| || | |||||| |||| ||||| ||||||||| |
|
|
T |
28490771 |
aaagaagattcttttgcttctagatgatgttgacaatttggagcaattagaggccattgctggaagatccgtttggtttggtccaggaagtagagtcatc |
28490672 |
T |
|
Q |
263 |
attaccactcg |
273 |
Q |
|
|
||||| ||||| |
|
|
T |
28490671 |
attacgactcg |
28490661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 29469086 - 29469196
Alignment:
Q |
163 |
aaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatc |
262 |
Q |
|
|
||||||| |||||||| |||| || ||||||||||| |||||| |||||||| | |||||| || ||||||||| |||| ||| || ||||||||| |
|
|
T |
29469086 |
aaagaaggttcttttgcttctagacgatgttgacaaggaggagcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc |
29469185 |
T |
|
Q |
263 |
attaccactcg |
273 |
Q |
|
|
|| |||||||| |
|
|
T |
29469186 |
atcaccactcg |
29469196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 29803181 - 29803071
Alignment:
Q |
163 |
aaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatc |
262 |
Q |
|
|
|||||||||||||||| |||| |||||||||||||| ||||||| ||||||| | |||||| || | |||||| |||| ||||| ||||||||| |
|
|
T |
29803181 |
aaagaagattcttttgcttctagatgatgttgacaatttggagcaattagaggccattgctggaagatccgtttggtttggtccaggaagtagagtcatc |
29803082 |
T |
|
Q |
263 |
attaccactcg |
273 |
Q |
|
|
||||| ||||| |
|
|
T |
29803081 |
attacgactcg |
29803071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 2185738 - 2185870
Alignment:
Q |
108 |
ataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctaga-aagaagattcttttgattcttgatgatgttgacaaactggagc |
206 |
Q |
|
|
||||| ||||| |||| |||||||||||| | |||| |||||||||||| | | | |||||| || | ||||||||||||||||||||| ||| || | |
|
|
T |
2185738 |
ataagctaggacatgtcagtgagggaattcaattcataaaggaaagacta-caacagaagaaggttttgttgattcttgatgatgttgaccaaccagacc |
2185836 |
T |
|
Q |
207 |
agctagaggctttggctggaggacttgattggtt |
240 |
Q |
|
|
|||| ||||||||||||||| ||| ||||||| |
|
|
T |
2185837 |
agctgaaggctttggctggagatcttaattggtt |
2185870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 29827009 - 29827063
Alignment:
Q |
219 |
tggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcg |
273 |
Q |
|
|
|||| ||||||||||||||||| |||| ||| |||| ||| |||||||||||||| |
|
|
T |
29827009 |
tggcgggaggacttgattggtttggtcctggcagcatagtgatcattaccactcg |
29827063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 28186530 - 28186586
Alignment:
Q |
332 |
aatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagtt |
388 |
Q |
|
|
||||||| |||||||||||||||||||| | | | |||||| |||||| |||||||| |
|
|
T |
28186530 |
aatgagaaagaagctcttgaattgttgacgtggaaggctttaaaaaataacaaagtt |
28186586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 193; Significance: 1e-104; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 449
Target Start/End: Complemental strand, 28127052 - 28126604
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| || |||||||||| | |||| ||||||| ||||| || |||| ||||||||||||| ||| | |||||||| | ||||||| | |
|
|
T |
28127052 |
tcaatttgaaggtttatgttttctagaagatgtgagagagatttcaactccatataatttgaaacatctccaagaaaagctccttttgaaaacagttgga |
28126953 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||| || ||||||||||| |||||||||||||||| ||||||| || |||| |||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
28126952 |
ttggacattaagttaggaggtgttagtgagggaattgcaatcataaaacaaaggctatgcagaaagaagattcttttgattcttgatgatgtcgacaaac |
28126853 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || || ||||||||| |||||||||| |
|
|
T |
28126852 |
tggagcagctagaggctttggctggaggacttgattggttcggtcgtggaagcaaagtcatcattaccactcgagagaaacacttactaacctgtcatgg |
28126753 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| |||||| ||||| ||| |||||||| ||| ||| |||| ||||||||||||||| | |||||||||||| || |||||||||||||||||||| |
|
|
T |
28126752 |
gatagaaagtacgcatgcggtaaaagggttgtatgtaacaaaagcacttgaattgttgaggtggatggcttttaaacataacaaagttccttcaagttat |
28126653 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
|| || |||||||||| | |||| | ||||| || ||||| ||||||| |
|
|
T |
28126652 |
gatgatgttttaaaccgggcagtttcatatgcttcaggccttcccttag |
28126604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 60 - 449
Target Start/End: Complemental strand, 28163693 - 28163305
Alignment:
Q |
60 |
tgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatc |
159 |
Q |
|
|
||||||||||||||||||| ||| |||| | |||||||| || | || ||||||||||| |||||||||||||||| ||||||| || |||| ||| |
|
|
T |
28163693 |
tgaaacatctccaggaagagctctttttga-aacagttagatcggacattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctaca |
28163595 |
T |
|
Q |
160 |
tagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtc |
259 |
Q |
|
|
|||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||| |
|
|
T |
28163594 |
tagaaataaaattcttttgattcttgatgatgtcgacaaactggagcagctggaggctttggctggaggactcgattggttcggtcgtggaagcagggtc |
28163495 |
T |
|
Q |
260 |
atcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttga |
359 |
Q |
|
|
|||||||||||||| || || ||||||||| ||||||||||||| ||||| ||| | |||||||||||| ||| ||| ||||| ||||||||||||| |
|
|
T |
28163494 |
atcattaccactcgagacaaacacttactaacctgtcatgggatagaaagtatgcattcggtagaagggttgtatgggacggaagcgcttgaattgttga |
28163395 |
T |
|
Q |
360 |
ggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
| | ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| |||| | ||||| || ||||| ||||||| |
|
|
T |
28163394 |
cgtggatggcttttaaaaataacaaagttccttcaagttatgaagatgttttaaatcgtgcagtttcatatgcttcaggccttcccttag |
28163305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 120 - 441
Target Start/End: Complemental strand, 267598 - 267277
Alignment:
Q |
120 |
atgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggcttt |
219 |
Q |
|
|
||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| || | | | || | | ||||| |
|
|
T |
267598 |
atgttagtgagggcattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgttaacgatataaaacaattgcatgcttt |
267499 |
T |
|
Q |
220 |
ggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgca |
319 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||| || |||||||||| || || || |||||| ||||||||||||| |||||| |||| | |
|
|
T |
267498 |
ggctggaggacttgattggttcggctatggaagcagagtcgtcgttaccactcgagacaagcaattactaacctgtcatgggatagaaagtacgcatgaa |
267399 |
T |
|
Q |
320 |
gtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtg |
419 |
Q |
|
|
|||||||||||| ||| ||| |||||||||||||||||||| | ||||||||||||||||| |||||| |||| ||| | |||||||||| |||| |
|
|
T |
267398 |
gtagaagggttgtatgggaccgaagctcttgaattgttgagttggatggcttttaaaaatgatccagttccatcaatttacaatgagattttaattcgtg |
267299 |
T |
|
Q |
420 |
tagttacttatgcatctggcct |
441 |
Q |
|
|
|||| ||||||| |||||||| |
|
|
T |
267298 |
cagttgcttatgcttctggcct |
267277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 173; Significance: 9e-93; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 109 - 441
Target Start/End: Original strand, 60482 - 60814
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
|||||||| |||||| ||||||||||| |||||||| |||||||| | | |||||||||||||||||||||||| ||||| |||||||| || |||| |
|
|
T |
60482 |
taagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatgacgttgacaatatgaagcaa |
60581 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
|| | ||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||| || ||||| ||||||||||||||||||| ||| || |
|
|
T |
60582 |
ctgaatgctttggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaa |
60681 |
T |
|
Q |
309 |
gtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagat |
408 |
Q |
|
|
||| |||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
60682 |
aaacatatgcagtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagat |
60781 |
T |
|
Q |
409 |
tttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||| || ||||||||| ||||||| |||||||| |
|
|
T |
60782 |
tttgaatcgtgtagttgcttatgcttctggcct |
60814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 173; Significance: 9e-93; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 109 - 441
Target Start/End: Original strand, 18074674 - 18075006
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
|||||||| |||||| ||||||||||| |||||||| |||||||| | | |||||||||||||||||||||||| ||||| |||||||| || |||| |
|
|
T |
18074674 |
taagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatgacgttgacaatatgaagcaa |
18074773 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
|| | ||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||| || ||||| ||||||||||||||||||| ||| || |
|
|
T |
18074774 |
ctgaatgctttggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaa |
18074873 |
T |
|
Q |
309 |
gtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagat |
408 |
Q |
|
|
||| |||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
18074874 |
aaacatatgcagtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagat |
18074973 |
T |
|
Q |
409 |
tttaaaccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||| || ||||||||| ||||||| |||||||| |
|
|
T |
18074974 |
tttgaatcgtgtagttgcttatgcttctggcct |
18075006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 60 - 455
Target Start/End: Complemental strand, 18654791 - 18654396
Alignment:
Q |
60 |
tgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatc |
159 |
Q |
|
|
|||||||||||||||| || |||||||||| |||| || | |||| ||||||||||| |||||||||||||||| | || |||||||| ||| |
|
|
T |
18654791 |
tgaaacatctccaggaggaactccttttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctaca |
18654692 |
T |
|
Q |
160 |
tagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtc |
259 |
Q |
|
|
|| ||||||||||||||||||||| |||||||| ||||| |||| | || | |||||||||||||||| ||||||||||||| |||||||||||| |
|
|
T |
18654691 |
tacaaagaagattcttttgattctcgatgatgtggacaatttggaaccactgcatgctttggctggaggacgtgattggttcggttgtggaagcagagtt |
18654592 |
T |
|
Q |
260 |
atcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttga |
359 |
Q |
|
|
||||||||||||||| | || ||||||||| | ||||| ||| || || |||| |||| ||||| || | | | | |||||||||||||||| |
|
|
T |
18654591 |
atcattaccactcgtaacaaacacttactaagcaatcatgagatagaaattatgcatgaagtaaaagggatgtctacggaaaatgctcttgaattgttga |
18654492 |
T |
|
Q |
360 |
ggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatag |
455 |
Q |
|
|
|| | ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||| || ||||| |||| |
|
|
T |
18654491 |
ggtggatggcttttaaaatttacaaagttccttcaagttatgaagagattttaaaccgtgcagttgcgtatgcttctggccttccattagctatag |
18654396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 450
Target Start/End: Complemental strand, 18698758 - 18698324
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | ||| || |||||||||||||||| || |||||||||| |||| | | |||| ||||||| |
|
|
T |
18698758 |
atgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaacactagcactgaaaattaagtta |
18698659 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| || || ||||||||||||||||||||| |||||||||||||| |||| || || | | |
|
|
T |
18698658 |
ggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagattcttttgattctcgatgatgttgacaatttggaacaactgcatg |
18698559 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || ||||||||| || ||||| ||| || || || |
|
|
T |
18698558 |
ctttggctggaggacgtgattggttcggctgtggaagcagagttatcattaccactcgtaacaaacacttactaaccaatcatgagatagaaattatcca |
18698459 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
|| |||| ||||| || | | | | |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
T |
18698458 |
tgaagtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaac |
18698359 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcctgcccttagc |
450 |
Q |
|
|
| || |||| ||||| |||||||| || ||||| |
|
|
T |
18698358 |
catgcagttgtgtatgcttctggccttccattagc |
18698324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 450
Target Start/End: Complemental strand, 18730862 - 18730428
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | ||| || |||||||||||||||| || |||||||||| |||| | | |||| ||||||| |
|
|
T |
18730862 |
atgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaacactagcactgaaaattaagtta |
18730763 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| ||| || ||||||||||||||||||||| |||||||||||||| |||| || || | | |
|
|
T |
18730762 |
ggaggtgttagtgagggaattccctatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgttgacaatttggaacaactgcatg |
18730663 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
||||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||| | || ||||||||| || ||||| ||| || || || |
|
|
T |
18730662 |
ctttggctggaggacgtgattggttcggctgtggaagcatagttatcattaccactcgtaacaaacacttactaaccaatcatgagatagaaattatcca |
18730563 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
|| |||| ||||| || | | | | |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
T |
18730562 |
tgaagtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaac |
18730463 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcctgcccttagc |
450 |
Q |
|
|
| || |||| ||||| |||||||| || ||||| |
|
|
T |
18730462 |
catgcagttgtgtatgcttctggccttccattagc |
18730428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 16 - 455
Target Start/End: Complemental strand, 18678918 - 18678479
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | ||| || |||||||||||||||| || |||||||||| |||| || | |||| ||||||| |
|
|
T |
18678918 |
atgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaacactttcactgaaaattaagtta |
18678819 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| ||| || ||||||||||||||||||||| |||||||| |||| |||| || || | | |
|
|
T |
18678818 |
ggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgtgcacaatttggaacaactgcatg |
18678719 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||| | || ||||||||| | ||||| ||| || || || |
|
|
T |
18678718 |
ctttggccggaggacgtgattggttcggttgtggaagcagagttatcattaccactcgtaacaaacacttactaagcaatcatgagatagaaattatgca |
18678619 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
|| |||| ||||| || | | | | |||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
T |
18678618 |
tgaagtaaaagggatgtctagggaaaatgctcttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaa |
18678519 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcctgcccttagcaatag |
455 |
Q |
|
|
|||| |||| ||||| |||||||| || ||||| |||| |
|
|
T |
18678518 |
cgtgcagttgtgtatgcttctggccttccattagctatag |
18678479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 60 - 455
Target Start/End: Complemental strand, 18723399 - 18723004
Alignment:
Q |
60 |
tgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatc |
159 |
Q |
|
|
|||||||||||||||| || |||||||||| |||| || | |||| ||| ||||||| |||||||||| ||||| | || ||| |||| ||| |
|
|
T |
18723399 |
tgaaacatctccaggaggaactccttttaaaaacactttcactgaaaattaacttaggaggtgttagtgagagaattccttatataaagaaaaggctaca |
18723300 |
T |
|
Q |
160 |
tagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtc |
259 |
Q |
|
|
|| ||||||||||||||||||||| |||||||||||||| || | || || | |||||||||||||||| |||||||||||| |||||||||||| |
|
|
T |
18723299 |
tacaaagaagattcttttgattctcgatgatgttgacaatttgaaacaactgcatgctttggctggaggacctgattggttcggctctggaagcagagtt |
18723200 |
T |
|
Q |
260 |
atcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttga |
359 |
Q |
|
|
||||||||||||||| | || || |||||| || ||||| | | || || |||| |||| ||||| || | | | | |||||||||||||||| |
|
|
T |
18723199 |
atcattaccactcgtaacaaacaattactaaccaatcatgaggtagaaattatgcatgaagtaaaagggatgtctacggaaaatgctcttgaattgttga |
18723100 |
T |
|
Q |
360 |
ggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttagcaatag |
455 |
Q |
|
|
|| | ||||||||||||| | ||||||||||||||||||||||||||||||||||||| | |||| | ||||| |||||||| || ||||| |||| |
|
|
T |
18723099 |
ggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaccgagcagttgcgtatgcttctggccttccattagctatag |
18723004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 116 - 441
Target Start/End: Complemental strand, 5090212 - 5089887
Alignment:
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
|||||| | |||||||||||| ||||||| ||| |||| ||| |||||||| ||||||||||||| |||||| ||||||||||| | || ||| ||| |
|
|
T |
5090212 |
ggagatatcagtgagggaattccaatcataaagaaaaggctacaaagaaagaaagttcttttgattctcgatgatattgacaaactgaaacaactacagg |
5090113 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
|||||| |||| || ||||||||| |||| ||| ||||||||||||||||||||||| || || ||||| ||| |||||||||||| | ||| | |
|
|
T |
5090112 |
ttttggccggagaacctgattggtttggtcttggcagcagagtcatcattaccactcgagacaaacacttgctaaaatgtcatgggattgatataacata |
5090013 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
| |||||| || || ||||||| ||||||||| |||| || ||| | | ||||||||||||| | ||| | |||||||||||| ||||||||| |
|
|
T |
5090012 |
cgaagtagatggtttaaatgagaacgaagctcttcaattattaaggtggaaggcttttaaaaatagtactgttaatccaagttatgaaggaattttaaac |
5089913 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| || |||||||| |||||||| |
|
|
T |
5089912 |
cgtgtggtaacttatgcttctggcct |
5089887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 344 - 419
Target Start/End: Complemental strand, 18688656 - 18688581
Alignment:
Q |
344 |
gctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtg |
419 |
Q |
|
|
|||||||||||||||||| | ||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |
|
|
T |
18688656 |
gctcttgaattgttgaggtggatggcttttaaaagttataaagttccttcaagttatgaagagattttaaaccgtg |
18688581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 163; Significance: 8e-87; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 16 - 441
Target Start/End: Complemental strand, 2901 - 2476
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa-ttgaaccataagtt |
114 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||| ||| || |||||||||| |||| || || ||||| |||||| |
|
|
T |
2901 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatcttcagttggagctccttttaaaaacacttcaacttgaaat-taagtt |
2803 |
T |
|
Q |
115 |
aggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagag |
214 |
Q |
|
|
|||| |||||||||||||||| | || |||||||| ||| |||||||||| |||||||||||||||||||||||||||| || |||| ||| | |
|
|
T |
2802 |
tggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacat |
2703 |
T |
|
Q |
215 |
gctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacac |
314 |
Q |
|
|
|||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||| || || ||||||||| ||||||||||||| | ||||| | |
|
|
T |
2702 |
gctttggctggaggacctgattggttcggccgtggaagcaaagtcatcattaccactcgagacaaacacttactaacctgtcatgggataaaaagtatgc |
2603 |
T |
|
Q |
315 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaa |
414 |
Q |
|
|
||| ||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||| |||| |||||||||||||| |
|
|
T |
2602 |
atgaagtagaagggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttccttcaggttacgaagagattttaaa |
2503 |
T |
|
Q |
415 |
ccgtgtagttacttatgcatctggcct |
441 |
Q |
|
|
||||| |||| | ||||| |||||||| |
|
|
T |
2502 |
ccgtgcagttgcatatgcttctggcct |
2476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 133; Significance: 6e-69; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 449
Target Start/End: Complemental strand, 29273215 - 29272767
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa |
100 |
Q |
|
|
|||||||||| | |||||||||||||| |||| |||||||||||| | | ||||| ||||||||||||| || | |||||||||| |||| | | |
|
|
T |
29273215 |
tcaatttgaagatttatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaaactccttttaaaaacaactgga |
29273116 |
T |
|
Q |
101 |
ttgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaac |
200 |
Q |
|
|
||| | |||||||| ||||||||||||| ||| |||| || ||||| || ||| ||||||||| |||||||||||||| ||||||||||| || |
|
|
T |
29273115 |
ttggaaattaagttagatcatgttagtgaggggattccaattataaaggagaggctaagtagaaagaaaattcttttgattctcgatgatgttgataatt |
29273016 |
T |
|
Q |
201 |
tggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgg |
300 |
Q |
|
|
|| |||| ||| | |||||||||||||||| |||||||||||| | |||||||| |||||||||||| ||||| || || ||||| ||| | |||||||| |
|
|
T |
29273015 |
tgaagcaactacatgctttggctggaggacatgattggttcggccgtggaagcaaagtcatcattactactcgagacaaacacttgctaacttgtcatgg |
29272916 |
T |
|
Q |
301 |
gattacaagtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttat |
400 |
Q |
|
|
||| | ||||| |||| |||||||||| || ||| |||| |||||||||||||||||||| | ||||||||||| ||| ||||||| ||||||| |||| |
|
|
T |
29272915 |
gataaaaagtatgcatgaagtagaagggctgtatgggacaaaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcaatttat |
29272816 |
T |
|
Q |
401 |
gaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
||||| ||||||| |||| |||| | ||||| || ||||| ||||||| |
|
|
T |
29272815 |
gaagacgttttaaatcgtgcagtttcatatgcttcgggccttcccttag |
29272767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 35984274 - 35984376
Alignment:
Q |
171 |
ttcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccac |
270 |
Q |
|
|
||||||||||||| ||||||||||||||| | || ||||||||||| |||| |||||| |||||||| | ||| ||| |||||||| |||||||| || |
|
|
T |
35984274 |
ttcttttgattctagatgatgttgacaaaatagaacagctagaggccttggttggagggtttgattggcttggttctggcagcagagttatcattacaac |
35984373 |
T |
|
Q |
271 |
tcg |
273 |
Q |
|
|
||| |
|
|
T |
35984374 |
tcg |
35984376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 12589639 - 12589749
Alignment:
Q |
163 |
aaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatc |
262 |
Q |
|
|
||||||| |||||||| |||| || ||||||||||| ||||||| ||||||| | |||||| || || |||||| || || || |||||||||||| |
|
|
T |
12589639 |
aaagaaggttcttttgcttctagacgatgttgacaatttggagcaattagaggccgttgctggaagatctgtttggtttggacaaggcagcagagtcatc |
12589738 |
T |
|
Q |
263 |
attaccactcg |
273 |
Q |
|
|
||||| ||||| |
|
|
T |
12589739 |
attacgactcg |
12589749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 4074 - 3641
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaa-ttgaaccataagtt |
114 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||||||||| || |||||||||| |||| || || ||||| |||||| |
|
|
T |
4074 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaacacttcaacttgaaat-taagtt |
3976 |
T |
|
Q |
115 |
aggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagag |
214 |
Q |
|
|
||||| |||||||||||||||||| || |||||||| || | ||||||||||||||||||||| |||||||||||| | ||||||| ||| || |
|
|
T |
3975 |
aggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaagattcttttgattctcgatgatgttgacgatatggagcaactacag |
3876 |
T |
|
Q |
215 |
gctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacac |
314 |
Q |
|
|
|||||||| |||| || ||||||||| || | ||||||||| ||||||||||||||||| || || ||||| ||| |||||||||| |||||| | |
|
|
T |
3875 |
gctttggcaggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacaaacacttgctaagaagtcatgggatagaaagtacgc |
3776 |
T |
|
Q |
315 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaa |
414 |
Q |
|
|
||| ||| ||||| || ||| ||||||||||||||| |||||||| | ||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |
|
|
T |
3775 |
atgaagtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaa |
3676 |
T |
|
Q |
415 |
ccgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
|||| |||| | ||||| || ||||| ||||||| |
|
|
T |
3675 |
tcgtgcagtttcatatgcttcgggccttcccttag |
3641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 13037 - 12604
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||||||||| || |||||||||| |||| || || ||| ||||||| |
|
|
T |
13037 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaacacttcaacagaaaactaagtta |
12938 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
||| |||||||||||||||| | || |||||||| || || |||||||| |||||||||||| |||||||||||| | || |||| ||| | | |
|
|
T |
12937 |
ggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgttgacgatatgaagcaactacatg |
12838 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
||||||| ||||||| |||||||||||| | ||||||||| ||||||||||||||||| || || ||||||||| |||||||||| | |||||| || |
|
|
T |
12837 |
ctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggataaaaagtacgca |
12738 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
|| ||| ||||| || ||| |||||||||||||| |||||||| | ||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |
|
|
T |
12737 |
tgaagtgaaagggctgtatggaacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaat |
12638 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
|||| |||| | ||||| || ||||| ||||||| |
|
|
T |
12637 |
cgtgcagtttcatatgcttcgggccttcccttag |
12604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 16 - 449
Target Start/End: Original strand, 8307 - 8740
Alignment:
Q |
16 |
atgttttcttcataatgtcagagagaattcaagtcataataaactgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagtta |
115 |
Q |
|
|
|||||||||| | ||||| |||||||||||| | |||||| |||||||||||||||| || |||||||||| |||| || || ||| ||||||| |
|
|
T |
8307 |
atgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaacacttcaacagaaaactaagtta |
8406 |
T |
|
Q |
116 |
ggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagagg |
215 |
Q |
|
|
||| |||||||||||||||| | || |||||||| || || |||||||| |||||||||||| |||||||||||| | || |||| ||| | | |
|
|
T |
8407 |
ggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgttgacgatatgaagcaactacatg |
8506 |
T |
|
Q |
216 |
ctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagtacaca |
315 |
Q |
|
|
||||||| ||||||| |||||||||||| | ||||||||| ||||||||||||||||| || || ||||||||| |||||||||| | |||||| || |
|
|
T |
8507 |
ctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggataaaaagtacgca |
8606 |
T |
|
Q |
316 |
tgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttccttcaagttatgaagagattttaaac |
415 |
Q |
|
|
|| ||| ||||| || ||| |||||||||||||| |||||||| | ||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |
|
|
T |
8607 |
tgaagtgaaagggctgtatggaacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaat |
8706 |
T |
|
Q |
416 |
cgtgtagttacttatgcatctggcctgcccttag |
449 |
Q |
|
|
|||| |||| | ||||| || ||||| ||||||| |
|
|
T |
8707 |
cgtgcagtttcatatgcttcgggccttcccttag |
8740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 387
Target Start/End: Complemental strand, 57563 - 57285
Alignment:
Q |
109 |
taagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcag |
208 |
Q |
|
|
|||||||| |||||| | ||||||||| ||||||| ||| |||| || |||||||| || | |||||||| ||||||||| || | ||| |||| |
|
|
T |
57563 |
taagttagtagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctcgatgatgttcacgagctgaagcaa |
57464 |
T |
|
Q |
209 |
ctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaa |
308 |
Q |
|
|
|| ||| |||||||||||||||||||||||| |||| ||| || | ||| |||||||||||||| || | || || ||||| ||||||||||| || |
|
|
T |
57463 |
ttacaggttttggctggaggacttgattggtttggtcctggtagtaaagtgatcattaccactcgagacgaacaattgctagcaggtcatgggattgaaa |
57364 |
T |
|
Q |
309 |
gtacacatgcagtagaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagt |
387 |
Q |
|
|
| || ||| | |||| ||| ||||||| |||||||||||||||||||||| | | ||||| |||||| ||||||| |
|
|
T |
57363 |
gagcatatgaaatagataagttaaatgagaaagaagctcttgaattgttgaggtggaatgctttcaaaaataacaaagt |
57285 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 361
Target Start/End: Original strand, 35642 - 35892
Alignment:
Q |
111 |
agttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgttgacaaactggagcagct |
210 |
Q |
|
|
||||||||||||| | |||||||||| ||||||| ||| |||| || |||||||| |||| |||||||| ||||||||| || |||| |||| | |
|
|
T |
35642 |
agttaggagatgtcaatgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctagatgatgttcacgaactaaagcaatt |
35741 |
T |
|
Q |
211 |
agaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttactagcctgtcatgggattacaagt |
310 |
Q |
|
|
||| |||||| |||| | |||||||||| |||| |||||| | ||| |||||||||||||| || || || || ||||| ||||||||||| ||| |
|
|
T |
35742 |
gcaggttttggcgggagaaattgattggtttggtcctggaagtaaagtgatcattaccactcgagacaaacaattgctagcaagtcatgggattgaaaga |
35841 |
T |
|
Q |
311 |
acacatgcagtagaagggttgaatgagacagaagctcttgaattgttgagg |
361 |
Q |
|
|
|| | | | |||| ||| ||||||| ||||||||||||||||||||| |
|
|
T |
35842 |
acgtacgaaatagataagttaaatgagaacgaagctcttgaattgttgagg |
35892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 273
Target Start/End: Original strand, 28416 - 28527
Alignment:
Q |
162 |
gaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcat |
261 |
Q |
|
|
||||||| |||| |||||||| ||||||||| ||||||| |||| | || |||||||||||||||||||||||| |||| |||||| | ||| || |
|
|
T |
28416 |
gaaagaaagttctattgattctcgatgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttggtcctggaagtaaagtgat |
28515 |
T |
|
Q |
262 |
cattaccactcg |
273 |
Q |
|
|
|||||||||||| |
|
|
T |
28516 |
cattaccactcg |
28527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 40491 - 40593
Alignment:
Q |
171 |
ttcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccac |
270 |
Q |
|
|
||||||||||||| ||| || | || ||||| |||| || ||| |||||||||||| |||||||||||| ||| || |||||||||||||||||||| |
|
|
T |
40491 |
ttcttttgattctagataatatggatgaactgaagcaactgcagggtttggctggagggcttgattggttcagtcctgacagcagagtcatcattaccac |
40590 |
T |
|
Q |
271 |
tcg |
273 |
Q |
|
|
||| |
|
|
T |
40591 |
tcg |
40593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 273
Target Start/End: Original strand, 43940 - 44034
Alignment:
Q |
179 |
attcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcg |
273 |
Q |
|
|
||||| ||||||||| || ||||| |||| | ||| ||| ||||||||||||||||||||||||| ||| || ||||| ||| |||||||||| |
|
|
T |
43940 |
attctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcg |
44034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 16691904 - 16691960
Alignment:
Q |
233 |
gattggttcggtcatggaagcagagtcatcattaccactcgtgataaccacttacta |
289 |
Q |
|
|
|||||||| |||| |||||| |||||||||||||||||||| || || ||||||||| |
|
|
T |
16691904 |
gattggtttggtcctggaagtagagtcatcattaccactcgagacaaacacttacta |
16691960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 3468329 - 3468258
Alignment:
Q |
173 |
cttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggt |
244 |
Q |
|
|
||||||||||||||||||||||||||| |||| ||| | | || || || ||||||| ||||||||||||| |
|
|
T |
3468329 |
cttttgattcttgatgatgttgacaaattggaacagattcaagcattagccggaggacgtgattggttcggt |
3468258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3280464 - 3280509
Alignment:
Q |
1 |
tcaatttgaaagtgtatgttttcttcataatgtcagagagaattca |
46 |
Q |
|
|
|||||||||| |||||||||||||||| ||||| ||||| |||||| |
|
|
T |
3280464 |
tcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattca |
3280509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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