View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1312_low_29 (Length: 251)

Name: NF1312_low_29
Description: NF1312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1312_low_29
NF1312_low_29
[»] chr3 (19 HSPs)
chr3 (49-220)||(34128449-34128620)
chr3 (49-220)||(30338138-30338309)
chr3 (49-220)||(17358504-17358674)
chr3 (49-220)||(30341242-30341413)
chr3 (49-213)||(3481694-3481858)
chr3 (49-201)||(3476249-3476401)
chr3 (49-201)||(4117007-4117159)
chr3 (49-220)||(54271257-54271421)
chr3 (111-220)||(17369085-17369194)
chr3 (111-213)||(15762604-15762706)
chr3 (111-213)||(15767765-15767867)
chr3 (111-213)||(55129156-55129257)
chr3 (111-213)||(20090236-20090338)
chr3 (111-213)||(20095361-20095463)
chr3 (67-110)||(17358407-17358450)
chr3 (47-86)||(53120133-53120172)
chr3 (54-117)||(7806029-7806092)
chr3 (49-86)||(13022663-13022700)
chr3 (51-84)||(26962640-26962673)
[»] chr7 (18 HSPs)
chr7 (50-220)||(21080359-21080529)
chr7 (49-220)||(2233990-2234161)
chr7 (49-220)||(17496038-17496209)
chr7 (49-220)||(17557005-17557176)
chr7 (49-220)||(32212003-32212174)
chr7 (54-220)||(42572543-42572709)
chr7 (49-220)||(12935022-12935193)
chr7 (49-220)||(16538711-16538882)
chr7 (49-220)||(16626780-16626951)
chr7 (49-220)||(19308914-19309085)
chr7 (49-201)||(43893480-43893632)
chr7 (49-201)||(47176553-47176704)
chr7 (111-213)||(33238421-33238523)
chr7 (111-213)||(47994219-47994321)
chr7 (111-213)||(33243598-33243700)
chr7 (111-213)||(47999394-47999496)
chr7 (179-213)||(47544794-47544828)
chr7 (49-86)||(28291984-28292021)
[»] chr8 (14 HSPs)
chr8 (47-220)||(17955172-17955345)
chr8 (48-220)||(43998584-43998755)
chr8 (49-220)||(24885262-24885433)
chr8 (49-220)||(42513886-42514057)
chr8 (49-201)||(21641184-21641335)
chr8 (111-214)||(32016119-32016222)
chr8 (111-213)||(32010945-32011047)
chr8 (111-213)||(2165439-2165542)
chr8 (49-86)||(13584784-13584821)
chr8 (49-86)||(19436089-19436126)
chr8 (49-86)||(19572238-19572275)
chr8 (49-86)||(19430647-19430684)
chr8 (49-86)||(19566796-19566833)
chr8 (49-86)||(31031172-31031209)
[»] chr6 (13 HSPs)
chr6 (49-220)||(2817439-2817610)
chr6 (49-220)||(34142719-34142890)
chr6 (49-220)||(34155335-34155506)
chr6 (49-201)||(34376402-34376554)
chr6 (49-201)||(6727834-6727986)
chr6 (49-201)||(24190711-24190864)
chr6 (111-213)||(21402107-21402209)
chr6 (111-213)||(22697817-22697919)
chr6 (111-213)||(22702993-22703095)
chr6 (111-213)||(29490857-29490959)
chr6 (106-201)||(31983470-31983565)
chr6 (49-112)||(31982117-31982180)
chr6 (49-86)||(19478752-19478789)
[»] chr1 (14 HSPs)
chr1 (49-220)||(3585239-3585410)
chr1 (49-220)||(5730709-5730880)
chr1 (49-220)||(48246010-48246181)
chr1 (106-220)||(5725360-5725474)
chr1 (111-213)||(27711689-27711791)
chr1 (111-213)||(34317859-34317961)
chr1 (111-213)||(36684289-36684391)
chr1 (111-213)||(37404045-37404147)
chr1 (112-213)||(37409164-37409265)
chr1 (111-213)||(11250750-11250852)
chr1 (111-213)||(27716809-27716911)
chr1 (173-213)||(50959029-50959069)
chr1 (49-86)||(10106655-10106692)
chr1 (49-86)||(26650569-26650606)
[»] chr2 (11 HSPs)
chr2 (59-220)||(4162933-4163094)
chr2 (69-220)||(28751059-28751210)
chr2 (111-213)||(42723025-42723127)
chr2 (111-213)||(42728194-42728296)
chr2 (111-213)||(40520003-40520106)
chr2 (111-213)||(40392685-40392787)
chr2 (111-213)||(44096721-44096823)
chr2 (111-213)||(44754180-44754282)
chr2 (111-213)||(40518094-40518197)
chr2 (111-213)||(44759346-44759448)
chr2 (49-86)||(42915177-42915214)
[»] chr4 (23 HSPs)
chr4 (49-220)||(53798267-53798438)
chr4 (49-220)||(51018744-51018914)
chr4 (49-201)||(13711308-13711460)
chr4 (49-220)||(41393798-41393967)
chr4 (49-220)||(9763311-9763482)
chr4 (47-201)||(4206978-4207131)
chr4 (49-198)||(47045680-47045828)
chr4 (73-201)||(13695719-13695847)
chr4 (111-213)||(8985032-8985134)
chr4 (111-213)||(13700876-13700978)
chr4 (111-213)||(21304580-21304682)
chr4 (111-214)||(36354561-36354664)
chr4 (111-213)||(8979912-8980014)
chr4 (111-213)||(21299460-21299562)
chr4 (111-213)||(54991842-54991944)
chr4 (111-213)||(36359747-36359849)
chr4 (111-213)||(39999488-39999590)
chr4 (111-213)||(40004446-40004548)
chr4 (111-213)||(54343622-54343724)
chr4 (111-213)||(54348776-54348878)
chr4 (111-213)||(54990437-54990539)
chr4 (49-86)||(653602-653639)
chr4 (49-86)||(10119948-10119985)
[»] scaffold0594 (1 HSPs)
scaffold0594 (49-220)||(8572-8743)
[»] chr5 (16 HSPs)
chr5 (49-220)||(36254455-36254626)
chr5 (49-220)||(1413111-1413284)
chr5 (53-201)||(24770662-24770810)
chr5 (49-201)||(24776116-24776268)
chr5 (79-220)||(26709656-26709797)
chr5 (79-220)||(26979390-26979531)
chr5 (111-213)||(17510424-17510526)
chr5 (111-213)||(43580026-43580128)
chr5 (111-213)||(17505319-17505421)
chr5 (111-213)||(42019939-42020041)
chr5 (111-213)||(42024719-42024821)
chr5 (122-213)||(41853846-41853937)
chr5 (121-213)||(41858960-41859052)
chr5 (49-86)||(7805687-7805724)
chr5 (49-86)||(13582124-13582161)
chr5 (49-86)||(14374738-14374775)
[»] scaffold0166 (2 HSPs)
scaffold0166 (49-201)||(13043-13195)
scaffold0166 (53-201)||(18500-18648)
[»] scaffold0517 (1 HSPs)
scaffold0517 (111-213)||(3929-4031)
[»] scaffold0014 (2 HSPs)
scaffold0014 (111-213)||(31964-32066)
scaffold0014 (111-213)||(26792-26894)
[»] scaffold0055 (1 HSPs)
scaffold0055 (111-213)||(3443-3545)
[»] scaffold0052 (1 HSPs)
scaffold0052 (111-213)||(80990-81092)
[»] scaffold0060 (1 HSPs)
scaffold0060 (49-169)||(37593-37712)
[»] scaffold0132 (2 HSPs)
scaffold0132 (49-86)||(2563-2600)
scaffold0132 (49-86)||(10523-10560)
[»] scaffold0011 (1 HSPs)
scaffold0011 (49-86)||(2240-2277)


Alignment Details
Target: chr3 (Bit Score: 164; Significance: 9e-88; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 34128620 - 34128449
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34128620 gttcacaaaagtgtgtaccccaaaggcacactcttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 34128521  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34128520 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 34128449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 30338309 - 30338138
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30338309 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 30338210  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  30338209 attttcaattcacactttacactaatttctccatccttgtgtttacattccaaaggctccacataacaacta 30338138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 17358504 - 17358674
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17358504 gttcacaaaagtgtgtaccccaaggggacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 17358603  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17358604 attttcaattcacactttacacta-tttctccatccttgtgtttacattccaaaggctccacaaaccaacta 17358674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 30341413 - 30341242
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  30341413 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacctaatgtgggccataaa 30341314  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  30341313 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacataacaacta 30341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 3481858 - 3481694
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481858 gttcacagaagtggataccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 3481759  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaa 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481758 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaa 3481694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 3476401 - 3476249
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3476401 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 3476302  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  3476301 attttcaattcacactttacactagtttctacatcattgtgtttacattccaa 3476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 4117159 - 4117007
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4117159 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 4117060  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  4117059 attttcaattcacactttacactagtttcttcatcattgtgtttacattccaa 4117007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 54271257 - 54271421
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54271257 gttcacaaaagtgggtaccccaagggcacacccttggaagtga-------catatataaacactactagagtgtgtgatctacccaatgtgggacataaa 54271349  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  54271350 attttcaattcacactttagactagtttctccatccttgtgtttacattccaaaggctccacataacaacta 54271421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 17369085 - 17369194
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369085 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 17369184  T
Q  211 aaatcaacta 220  Q
    ||| ||||||    
T  17369185 aaaccaacta 17369194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 15762706 - 15762604
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  15762706 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 15762607  T
Q  211 aaa 213  Q
    |||    
T  15762606 aaa 15762604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 15767867 - 15767765
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  15767867 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 15767768  T
Q  211 aaa 213  Q
    |||    
T  15767767 aaa 15767765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 55129156 - 55129257
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  55129156 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat-cttgtgtttacattccaaaggctccac 55129254  T
Q  211 aaa 213  Q
    |||    
T  55129255 aaa 55129257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 20090338 - 20090236
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  20090338 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatcctgatgtttacatgccaaaggctccac 20090239  T
Q  211 aaa 213  Q
    |||    
T  20090238 aaa 20090236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 20095463 - 20095361
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  20095463 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatcctgatgtttacatgccaaaggctccac 20095364  T
Q  211 aaa 213  Q
    |||    
T  20095363 aaa 20095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 17358407 - 17358450
Alignment:
Q  67 cccaagggcacacccttggaagtgatatcccacatatataaaca 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17358407 cccaagggcacacccttggaagtgatatcccacatatataaaca 17358450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 53120133 - 53120172
Alignment:
Q  47 ctgttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  53120133 ctgttcacaaaagtgggtaccccaagggcacacccttgga 53120172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 7806092 - 7806029
Alignment:
Q  54 caaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactag 117  Q
    |||||||  |||||||||||||||| ||||||| |||||   |||| |||||||||||||||||    
T  7806092 caaaagtaagtaccccaagggcacatccttggaggtgatccaccacttatataaacactactag 7806029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 13022663 - 13022700
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  13022663 gttcacaaaagtgggtaccccaaggtcacacccttgga 13022700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 26962640 - 26962673
Alignment:
Q  51 tcacaaaagtgtgtaccccaagggcacacccttg 84  Q
    ||||||||||| ||||||||||||||||||||||    
T  26962640 tcacaaaagtgggtaccccaagggcacacccttg 26962673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 50 - 220
Target Start/End: Complemental strand, 21080529 - 21080359
Alignment:
Q  50 ttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21080529 ttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaacgtgggacataaaa 21080430  T
Q  150 ttttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21080429 ttttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaacta 21080359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 2234161 - 2233990
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2234161 gttcacaaaagtgtgtaccccaagggaacacccttggaagtgatatcccatatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 2234062  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  2234061 attttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccacaaaccaacta 2233990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 17496038 - 17496209
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17496038 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 17496137  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||    
T  17496138 attttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaacta 17496209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 17557176 - 17557005
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17557176 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 17557077  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||    
T  17557076 attttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaacta 17557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 32212174 - 32212003
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32212174 gttcacaaaagtgggtaccccaagcacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgagacataaa 32212075  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||    
T  32212074 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaagtctcaacataacaacta 32212003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 42572543 - 42572709
Alignment:
Q  54 caaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaatttt 153  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42572543 caaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaatttt 42572642  T
Q  154 caattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||    
T  42572643 caattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaacta 42572709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 12935022 - 12935193
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12935022 gttcacaaaagtgggtaccccaagggcacaccattggaagtgatttcccacatatataaacactactaaagtgtgtgatctacccaatgtgggacataaa 12935121  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||    
T  12935122 attttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaacta 12935193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 16538882 - 16538711
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||    
T  16538882 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactattaaagtgtgtgatctactcaatatgggacataaa 16538783  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||    
T  16538782 attttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaacta 16538711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 16626780 - 16626951
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||    
T  16626780 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactattaaagtgtgtgatctactcaatatgggacataaa 16626879  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||    
T  16626880 attttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaacta 16626951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 19309085 - 19308914
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19309085 gttcacaaaagtaggtaccccaagggcacatccttggaagtgatttcccacatatataaacactactagagtgtgtgatctatccaatgtgggacataaa 19308986  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||    
T  19308985 attttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccacataacaacta 19308914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 43893480 - 43893632
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43893480 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgagggacataaa 43893579  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  43893580 attttcaattcacactttacgctagtttctacatcattgtgtttacattccaa 43893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 47176704 - 47176553
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47176704 gttcacaaaagtgggtaccc-aagggcactcccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 47176606  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  47176605 attttcaattcacactttacactagtttctacatcattgtgtttacattccaa 47176553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 33238421 - 33238523
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238421 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 33238520  T
Q  211 aaa 213  Q
    |||    
T  33238521 aaa 33238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 47994219 - 47994321
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994219 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 47994318  T
Q  211 aaa 213  Q
    |||    
T  47994319 aaa 47994321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 33243598 - 33243700
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33243598 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatgccaaaggctccac 33243697  T
Q  211 aaa 213  Q
    |||    
T  33243698 aaa 33243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 47999394 - 47999496
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47999394 ctactagagtgtgtgatctacccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttatgtttacattccaaaggctccac 47999493  T
Q  211 aaa 213  Q
    |||    
T  47999494 aaa 47999496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 47544828 - 47544794
Alignment:
Q  179 ccatccttgtgtttacattccaaaggctccacaaa 213  Q
    |||||||||||||||||||||||||||||||||||    
T  47544828 ccatccttgtgtttacattccaaaggctccacaaa 47544794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 28292021 - 28291984
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  28292021 gttcacaaaagtgggtaccccaagggcacacccttgga 28291984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 47 - 220
Target Start/End: Complemental strand, 17955345 - 17955172
Alignment:
Q  47 ctgttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacata 146  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17955345 ctgttcacaaaagtgtgtaccccaagggcacacccgtggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacata 17955246  T
Q  147 aaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17955245 aaattttcaattcacacttcacactagtttctccatccttgtgtttacattccaaaggctccacaaaacaacta 17955172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 48 - 220
Target Start/End: Complemental strand, 43998755 - 43998584
Alignment:
Q  48 tgttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataa 147  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43998755 tgttcacaaaagtgtgtaccccaagcacacacc-ttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataa 43998657  T
Q  148 aattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  43998656 aattttcaattcacactttacactagtttctccatccttgtgtttacatttcaaaggctccacaaaccaacta 43998584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 24885262 - 24885433
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885262 gttcacaaaagtgggtaccccaagggtacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 24885361  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||    
T  24885362 attttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaacta 24885433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 42514057 - 42513886
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42514057 gttcacaaaagtgggtaccccaaggacacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctatccaatgtgggacataaa 42513958  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||| | ||||||    
T  42513957 attttcaattcacactttacactattttctacatccttgtgtttacattccaatgtctccacataacaacta 42513886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 21641335 - 21641184
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21641335 gttcacaaaagtggataccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 21641236  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  21641235 attttcaattcacactttacactag-atctacatccttgtatttacattccaa 21641184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 32016119 - 32016222
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32016119 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 32016218  T
Q  211 aaat 214  Q
    ||||    
T  32016219 aaat 32016222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 32010945 - 32011047
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32010945 ctactagagtgtatgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 32011044  T
Q  211 aaa 213  Q
    |||    
T  32011045 aaa 32011047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 2165542 - 2165439
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatt-ccaaaggctcca 209  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  2165542 ctactagagtgtgtgatctacccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattcccaaagactcca 2165443  T
Q  210 caaa 213  Q
    ||||    
T  2165442 caaa 2165439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 13584784 - 13584821
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13584784 gttcacaaaagtgggtaccccaagggcacacccttgga 13584821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 19436089 - 19436126
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19436089 gttcacaaaagtgggtaccccaagggcacacccttgga 19436126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 19572238 - 19572275
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19572238 gttcacaaaagtgggtaccccaagggcacacccttgga 19572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 19430647 - 19430684
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  19430647 gttcacaaaagtgggtatcccaagggcacacccttgga 19430684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 19566796 - 19566833
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  19566796 gttcacaaaagtgggtatcccaagggcacacccttgga 19566833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 31031172 - 31031209
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  31031172 gttcacaaaagtgggtaccccaagggcacatccttgga 31031209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 2817610 - 2817439
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2817610 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacattaa 2817511  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  2817510 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacataacaacta 2817439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 34142719 - 34142890
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34142719 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 34142818  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||    
T  34142819 attttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaacta 34142890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 34155335 - 34155506
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34155335 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 34155434  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||    
T  34155435 attttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaacta 34155506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 34376402 - 34376554
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34376402 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgttatctacccaatgtgggacataaa 34376501  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34376502 attttcaattcacactttacactagtttctacatcattgtgtttacattccaa 34376554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 6727986 - 6727834
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6727986 gttcacaaaagtgggtaccccaagggcacacatttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtggaacataaa 6727887  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  6727886 attttcaattcacactttacactagtttctacatcattgtgtttacattccaa 6727834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 24190864 - 24190711
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacat-aa 147  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24190864 gttcccaaaagtgggtaccccaaggggacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 24190765  T
Q  148 aattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  24190764 aattttcaattcacactttacactagtttctacatcattgtgtttacattccaa 24190711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 21402107 - 21402209
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402107 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 21402206  T
Q  211 aaa 213  Q
    |||    
T  21402207 aaa 21402209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 22697919 - 22697817
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697919 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 22697820  T
Q  211 aaa 213  Q
    |||    
T  22697819 aaa 22697817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 22703095 - 22702993
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703095 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 22702996  T
Q  211 aaa 213  Q
    |||    
T  22702995 aaa 22702993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 29490959 - 29490857
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29490959 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaagctccac 29490860  T
Q  211 aaa 213  Q
    |||    
T  29490859 aaa 29490857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 31983470 - 31983565
Alignment:
Q  106 aaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  31983470 aaacactactagagtgtgtgatctacccaatgcgggacataaaattttcaattcacactttacactaatttctacatcattgtgtttacattccaa 31983565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 31982117 - 31982180
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacact 112  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31982117 gttcacaaaagtgggtaccccaagggcacgcccttggaagtgatatcccacatatataaacact 31982180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 19478752 - 19478789
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19478752 gttcacaaaagtgggtaccccaagggcacacccttgga 19478789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 3585239 - 3585410
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585239 gttcacaaaagtgtgtaccccaagggcacaccctcggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 3585338  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3585339 attttcaattcacattttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaacta 3585410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 5730709 - 5730880
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5730709 gttcacaaaagtgtgtaccccaagggcacacccttgggagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 5730808  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  5730809 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggtttcacaaaccaacta 5730880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 48246181 - 48246010
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48246181 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcgcacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 48246082  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    | ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||    
T  48246081 aattttaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccacataacaacta 48246010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 5725360 - 5725474
Alignment:
Q  106 aaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725360 aaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggc 5725459  T
Q  206 tccacaaatcaacta 220  Q
    |||||||| ||||||    
T  5725460 tccacaaaccaacta 5725474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 27711689 - 27711791
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711689 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 27711788  T
Q  211 aaa 213  Q
    |||    
T  27711789 aaa 27711791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 34317961 - 34317859
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317961 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 34317862  T
Q  211 aaa 213  Q
    |||    
T  34317861 aaa 34317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 36684391 - 36684289
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684391 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 36684292  T
Q  211 aaa 213  Q
    |||    
T  36684291 aaa 36684289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 37404147 - 37404045
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404147 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 37404048  T
Q  211 aaa 213  Q
    |||    
T  37404047 aaa 37404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 37409265 - 37409164
Alignment:
Q  112 tactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccaca 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409265 tactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccaca 37409166  T
Q  212 aa 213  Q
    ||    
T  37409165 aa 37409164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 11250852 - 11250750
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11250852 ctactagagtgtgtgatctaaccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagactccac 11250753  T
Q  211 aaa 213  Q
    |||    
T  11250752 aaa 11250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 27716809 - 27716911
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27716809 ctactagagtgtgtgatctacccgatgtgggacataaaaatttcaattcacactttacactagtttctccatccttgtgcttacgttccaaaggctccac 27716908  T
Q  211 aaa 213  Q
    |||    
T  27716909 aaa 27716911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 50959069 - 50959029
Alignment:
Q  173 gtttctccatccttgtgtttacattccaaaggctccacaaa 213  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  50959069 gtttctccattcttgtgtttacattccaaaggctccacaaa 50959029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 10106655 - 10106692
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10106655 gttcacaaaagtgggtaccccaagggcacacccttgga 10106692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 26650606 - 26650569
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  26650606 gttcacaaaagtgggtaccccaagggcacatccttgga 26650569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 4e-84; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 4163094 - 4162933
Alignment:
Q  59 gtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaatt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4163094 gtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaatt 4162995  T
Q  159 cacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4162994 cacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaacta 4162933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 69 - 220
Target Start/End: Complemental strand, 28751210 - 28751059
Alignment:
Q  69 caagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttac 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751210 caagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttac 28751111  T
Q  169 actagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  28751110 actagtttctccatccttgtgtttacattccaaaggctccacataacaacta 28751059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 42723127 - 42723025
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723127 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 42723028  T
Q  211 aaa 213  Q
    |||    
T  42723027 aaa 42723025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 42728296 - 42728194
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728296 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 42728197  T
Q  211 aaa 213  Q
    |||    
T  42728196 aaa 42728194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 40520003 - 40520106
Alignment:
Q  111 ctactagagtgtgtgatctaccca-atgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 209  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520003 ctactagagtgtgtgatctaccccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 40520102  T
Q  210 caaa 213  Q
    ||||    
T  40520103 caaa 40520106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 40392685 - 40392787
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  40392685 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacattgcaaaggctccac 40392784  T
Q  211 aaa 213  Q
    |||    
T  40392785 aaa 40392787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 44096721 - 44096823
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  44096721 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttttgtttacattccaaatgctccac 44096820  T
Q  211 aaa 213  Q
    |||    
T  44096821 aaa 44096823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 44754282 - 44754180
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44754282 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 44754183  T
Q  211 aaa 213  Q
    |||    
T  44754182 aaa 44754180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 40518197 - 40518094
Alignment:
Q  111 ctactagagtgtgtgatctaccca-atgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 209  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40518197 ctactagagtgtgtgatctaccccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttatattccaaaggctcca 40518098  T
Q  210 caaa 213  Q
    ||||    
T  40518097 caaa 40518094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 44759448 - 44759346
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  44759448 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactaatttctccatccttatgtttacatgccaaaggctccac 44759349  T
Q  211 aaa 213  Q
    |||    
T  44759348 aaa 44759346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 42915177 - 42915214
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  42915177 gttcacaaaagtgggtaccccaagggcacacccttgga 42915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 53798267 - 53798438
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53798267 gttcacaaaagtgtgtaccccaaaggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtaggacataaa 53798366  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  53798367 attttcaattcacactttacactagtttctccattcttgtgtttacattccaaaggctccacaaaccaacta 53798438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 51018914 - 51018744
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51018914 gttcacaaaagtgcgtaccc-aagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 51018816  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||    
T  51018815 attttcaattcacactttacactagtttctacatccttgtgtgtacattccaaagtctccacataacaacta 51018744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 13711308 - 13711460
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13711308 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 13711407  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  13711408 attttcaattcacactttacactagtttctacatcattgtgtttacattccaa 13711460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 41393798 - 41393967
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393798 gttcacaaaagtgggtaccccaagggcacacccttggaagtgat--cacacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 41393895  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||    
T  41393896 attttcaattcacactttacactagtttttccatccttgtgtttacattccaaaggcttcacataacaacta 41393967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 9763482 - 9763311
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9763482 gttcacaaaagtgggtaccccaagggcacacccttggaggtgatatccctcatatataaacactactagagtgtgtgatctactcaatgtgggacataaa 9763383  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||    
T  9763382 attttcaattcatgctttacactagtttctacatccttgtgtttacattccaaagtctccacataacaacta 9763311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 47 - 201
Target Start/End: Original strand, 4206978 - 4207131
Alignment:
Q  47 ctgttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacata 146  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4206978 ctgttcacaaaagtgggtaccccaagggcacacccttgaaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacata 4207077  T
Q  147 aaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  4207078 aaattttcaattcacactttacactagtttctacatcattgtg-ttacattccaa 4207131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 47045828 - 47045680
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47045828 gttcacaaaagtgggtaccc-aagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctatccaatgtgggacataaa 47045730  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattc 198  Q
    ||||||||||||||||||||||||||||||   || ||||||||||||||    
T  47045729 attttcaattcacactttacactagtttctatttcattgtgtttacattc 47045680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 201
Target Start/End: Original strand, 13695719 - 13695847
Alignment:
Q  73 ggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacacta 172  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13695719 ggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacacta 13695818  T
Q  173 gtttctccatccttgtgtttacattccaa 201  Q
    |||||| |||| |||||||||||||||||    
T  13695819 gtttctacatcattgtgtttacattccaa 13695847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 8985134 - 8985032
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985134 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 8985035  T
Q  211 aaa 213  Q
    |||    
T  8985034 aaa 8985032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 13700876 - 13700978
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700876 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 13700975  T
Q  211 aaa 213  Q
    |||    
T  13700976 aaa 13700978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 21304682 - 21304580
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304682 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 21304583  T
Q  211 aaa 213  Q
    |||    
T  21304582 aaa 21304580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 36354561 - 36354664
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36354561 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacattccaaaggctccac 36354660  T
Q  211 aaat 214  Q
    ||||    
T  36354661 aaat 36354664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 8980014 - 8979912
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980014 ctactagagtgtgtgatctacccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 8979915  T
Q  211 aaa 213  Q
    |||    
T  8979914 aaa 8979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 21299562 - 21299460
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21299562 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccac 21299463  T
Q  211 aaa 213  Q
    |||    
T  21299462 aaa 21299460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 54991842 - 54991944
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991842 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 54991941  T
Q  211 aaa 213  Q
    |||    
T  54991942 aaa 54991944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 36359747 - 36359849
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  36359747 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacatttcaaaggctccac 36359846  T
Q  211 aaa 213  Q
    |||    
T  36359847 aaa 36359849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 39999488 - 39999590
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  39999488 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 39999587  T
Q  211 aaa 213  Q
    |||    
T  39999588 aaa 39999590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 40004446 - 40004548
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  40004446 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 40004545  T
Q  211 aaa 213  Q
    |||    
T  40004546 aaa 40004548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 54343622 - 54343724
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  54343622 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 54343721  T
Q  211 aaa 213  Q
    |||    
T  54343722 aaa 54343724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 54348776 - 54348878
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  54348776 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccac 54348875  T
Q  211 aaa 213  Q
    |||    
T  54348876 aaa 54348878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 54990539 - 54990437
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54990539 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacattccaaaggctccac 54990440  T
Q  211 aaa 213  Q
    |||    
T  54990439 aaa 54990437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 653602 - 653639
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  653602 gttcacaaaagtgggtaccccaagggcacacccttgga 653639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 10119985 - 10119948
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  10119985 gttcacaaaagtgggtaccccaagggtacacccttgga 10119948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 8743 - 8572
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8743 gttcacaaaagtgggtaccccaagggcacacccttgaaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 8644  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8643 attttaaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacataacaacta 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 36254455 - 36254626
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36254455 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtggaacataaa 36254554  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| | ||||||    
T  36254555 attttcaattcacactttacactagtttctacatccttgtgtttacattccaatgtctccacataacaacta 36254626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 1413284 - 1413111
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcaca--cccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacata 146  Q
    ||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1413284 gttcacaaaagtgggtaccccaagggcgcaagcccttggaagtgatatcccacatatataaacactactagagtgtgtgatctactcaatgtgggacata 1413185  T
Q  147 aaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  1413184 aaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccacataacaacta 1413111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 53 - 201
Target Start/End: Complemental strand, 24770810 - 24770662
Alignment:
Q  53 acaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattt 152  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24770810 acaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattt 24770711  T
Q  153 tcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  24770710 tcaattcacactttacactagtttctacatcattgtgtttacattccaa 24770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 24776268 - 24776116
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776268 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 24776169  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  24776168 attttcaattcacactttatactagtttctacatcattgtgtttacattccaa 24776116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 26709656 - 26709797
Alignment:
Q  79 cccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttct 178  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26709656 cccttggaagtgatatctcacatatataaacactactacaatgtgtaatctactcaatgtgggacataaaattttcaattcacactttacactagtttct 26709755  T
Q  179 ccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  26709756 ccattcttgtgtttacattccataggctccacaaaccaacta 26709797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 26979390 - 26979531
Alignment:
Q  79 cccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttct 178  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26979390 cccttggaagtgatatctcacatatataaacactactacaatgtgtaatctactcaatgtgggacataaaattttcaattcacactttacactagtttct 26979489  T
Q  179 ccatccttgtgtttacattccaaaggctccacaaatcaacta 220  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  26979490 ccattcttgtgtttacattccataggctccacaaaccaacta 26979531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 17510424 - 17510526
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510424 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 17510523  T
Q  211 aaa 213  Q
    |||    
T  17510524 aaa 17510526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 43580026 - 43580128
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580026 ctactagagtatgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 43580125  T
Q  211 aaa 213  Q
    |||    
T  43580126 aaa 43580128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 17505319 - 17505421
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  17505319 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacaatagtttttccatccttgtgtttacattccaaaggctccac 17505418  T
Q  211 aaa 213  Q
    |||    
T  17505419 aaa 17505421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 42019939 - 42020041
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42019939 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacattttacattagtttctccatccttgtgtttacattccaaaggctccac 42020038  T
Q  211 aaa 213  Q
    |||    
T  42020039 aaa 42020041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 42024719 - 42024821
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  42024719 ctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacattttacactagtttctccatccttatgtttacattccaaaggctccac 42024818  T
Q  211 aaa 213  Q
    |||    
T  42024819 aaa 42024821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 41853846 - 41853937
Alignment:
Q  122 tgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaa 213  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41853846 tgtgatctacccgatgtgggacatagaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaa 41853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 41858960 - 41859052
Alignment:
Q  121 gtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaa 213  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  41858960 gtgtgatctacccgatgtgggacatagaattttcaattcacactttacactaatttttccatccttgtgtttacattccaaaggctccacaaa 41859052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 7805687 - 7805724
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  7805687 gttcacaaaagtgggtaccccaagggcacacccttgga 7805724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 13582161 - 13582124
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13582161 gttcacaaaagtgggtaccccaagggcacacccttgga 13582124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 14374738 - 14374775
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  14374738 gttcacaaaagtgggtaccccaagggcacacccttgga 14374775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 13195 - 13043
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13195 gttcacaaaagtgggtaccccaagggcacacccttggaagtgatttcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 13096  T
Q  149 attttcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  13095 attttcaattcacactttacactagtttctacatcattgtgtttacattccaa 13043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 53 - 201
Target Start/End: Complemental strand, 18648 - 18500
Alignment:
Q  53 acaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattt 152  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18648 acaaaagtgggtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaaattt 18549  T
Q  153 tcaattcacactttacactagtttctccatccttgtgtttacattccaa 201  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  18548 tcaattcacactttatactagtttctacatcattgtgtttacattccaa 18500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 3929 - 4031
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3929 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 4028  T
Q  211 aaa 213  Q
    |||    
T  4029 aaa 4031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 31964 - 32066
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 32063  T
Q  211 aaa 213  Q
    |||    
T  32064 aaa 32066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 26792 - 26894
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26792 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttttgtttacattccaaaggctccac 26891  T
Q  211 aaa 213  Q
    |||    
T  26892 aaa 26894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 3443 - 3545
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3443 ctactagagtgtgtgatctaccggatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 3542  T
Q  211 aaa 213  Q
    |||    
T  3543 aaa 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 81092 - 80990
Alignment:
Q  111 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 210  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  81092 ctactagagtgtgtgatctaccggatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 80993  T
Q  211 aaa 213  Q
    |||    
T  80992 aaa 80990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 37593 - 37712
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttggaagtgatatcccacatatataaacactactagagtgtgtgatctacccaatgtgggacataaa 148  Q
    ||||||||||||| |||||||||||||||||  ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37593 gttcacaaaagtgggtaccccaagggcacacttttg-aggtgatatcccacatatataaacactactggagtgtgtgatctacccaatgtgggacataaa 37691  T
Q  149 attttcaattcacactttaca 169  Q
    |||||||||||||||||||||    
T  37692 attttcaattcacactttaca 37712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 2600 - 2563
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2600 gttcacaaaagtgggtaccccaagggcacacccttgga 2563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 10560 - 10523
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10560 gttcacaaaagtgggtaccccaagggcacacccttgga 10523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 2240 - 2277
Alignment:
Q  49 gttcacaaaagtgtgtaccccaagggcacacccttgga 86  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2240 gttcacaaaagtgggtaccccaagggcacacccttgga 2277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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