View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1312_low_31 (Length: 251)
Name: NF1312_low_31
Description: NF1312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1312_low_31 |
 | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 41)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 26143682 - 26143447
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26143682 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctca |
26143583 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26143582 |
gagcccatgtcaagaagcaatttcacttcttctattcgggactgtaatccaacagggtatttggctacatttaaaaaaacatgattgatattgttggaga |
26143483 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
26143482 |
tgtcttcgactatcttctcaataaacttgtattcat |
26143447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 25580536 - 25580301
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
25580536 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgtggaccacatcctca |
25580437 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
25580436 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctacgtttaaaaaaacatgattgatattgttggaga |
25580337 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
25580336 |
tgtcttcgactatcttctcaataaacttgtattcat |
25580301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 25539357 - 25539122
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25539357 |
ttcaaattgatcagcaacaaaattaaaaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
25539258 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| |||| ||| ||||||||||||||||||||||||| |
|
|
| T |
25539257 |
gagcccaagtcaagaagcaatttcacttgttctattggggactgtaatccaacagggtatttggccacatataaaaaaacatgattgatattgttggaga |
25539158 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
25539157 |
tgtcttcgactatcttctcaataaacttgtattcat |
25539122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 25483873 - 25483638
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25483873 |
ttcaaattgatcagcaagaaaattaaaaactgcttttgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctca |
25483774 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||| ||||||||||||||||||||| |
|
|
| T |
25483773 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctacgtttaaaaaatcatgattgatattgttggaga |
25483674 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
25483673 |
tgtattggactatcttctcaataaacttgtgttcat |
25483638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 26056736 - 26056502
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| |
|
|
| T |
26056736 |
ttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctca |
26056637 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
26056636 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggaga |
26056537 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattca |
239 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26056536 |
tgccttcgactatcttctcaataaacttgcattca |
26056502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 26076706 - 26076472
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| |
|
|
| T |
26076706 |
ttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctca |
26076607 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
26076606 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggaga |
26076507 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattca |
239 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26076506 |
tgccttcgactatcttctcaataaacttgcattca |
26076472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 26656779 - 26656544
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |
|
|
| T |
26656779 |
ttcaaattgatcagcgacaaaattataaattgctttggcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatcctta |
26656680 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| ||||| |||||||||||||||||||||| || ||| |||| ||| |||||||||| |||||| |||| ||| |||||| ||||||| |||| ||||| |
|
|
| T |
26656679 |
gatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggaga |
26656580 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| |
|
|
| T |
26656579 |
tgtctttgactatattctcaataaacttgtattcat |
26656544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 26762750 - 26762515
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |
|
|
| T |
26762750 |
ttcaaattgatcagcgacaaaattataaattgctttggcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatcctta |
26762651 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| ||||| |||||||||||||||||||||| || ||| |||| ||| |||||||||| |||||| |||| ||| |||||| ||||||| |||| ||||| |
|
|
| T |
26762650 |
gatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggaga |
26762551 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| |
|
|
| T |
26762550 |
tgtctttgactatattctcaataaacttgtattcat |
26762515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 26647293 - 26647058
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| | || ||| |
|
|
| T |
26647293 |
ttcaaattgatcagcaacaaaattataaatcgctttggcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatca |
26647194 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| | || ||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||| ||| | ||| ||||||| |||||||||| |
|
|
| T |
26647193 |
gattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggaga |
26647094 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26647093 |
tgtcttcgactatcttcccaataaacttgtattcat |
26647058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 26753261 - 26753026
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| | || ||| |
|
|
| T |
26753261 |
ttcaaattgatcagcaacaaaattataaatcgctttggcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatca |
26753162 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| | || ||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||| ||| | ||| ||||||| |||||||||| |
|
|
| T |
26753161 |
gattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggaga |
26753062 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26753061 |
tgtcttcgactatcttcccaataaacttgtattcat |
26753026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 27215266 - 27215031
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||| | |
|
|
| T |
27215266 |
ttcaaactgatcagcaatgaaattaaaaattgcttttgcaagtgttgatttacccatgcctccagctccatgaagtcctaccatgtggacctcttcctta |
27215167 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| |||||||||||||||||||| ||||||| |||| ||| ||||| |||||||||| |||||| |||| ||| ||| || |||| | ||||| |||| |
|
|
| T |
27215166 |
gatcccttgtcaagaagcaattttacttgttgtatttgggtatgtaatccaacagggtgtttggcaacatgtaaaaaatcacgattcgtcttgtttgaga |
27215067 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27215066 |
tgtcttcaactatcttctcaataaacttgtattcat |
27215031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 238
Target Start/End: Complemental strand, 26884884 - 26884651
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||| | || | | |
|
|
| T |
26884884 |
ttcaaattgatcagcaacataattataaattgcttttgcaagtgttgatttacccaagcctccagtaccataaattcctaccatgtgtaccccttcgtta |
26884785 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| |||| |||||||||||||| | ||||| || |||| ||||||| |||||||||| ||||||||||| ||| | |||| ||||||| |||| ||||| |
|
|
| T |
26884784 |
gattccttatcaagaagcaattttaattgttgtactcggtactgtaatccaacagggtatttggctacatgtaaaacaacacgattgattttgtcggaga |
26884685 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattc |
238 |
Q |
| |
|
| ||||||||||||||| | ||||||| |||||| |
|
|
| T |
26884684 |
tatcttcgactatcttcccgataaactcgtattc |
26884651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 26862394 - 26862227
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| | || ||| |
|
|
| T |
26862394 |
ttcaaattgatcggcaacaaaattataaattgcttttgcaagtgttgatttccccatgcctccagtaccataaagtcctaccatgtgtaccccttcatca |
26862295 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctac |
172 |
Q |
| |
|
|| || | ||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||| |
|
|
| T |
26862294 |
gattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggtatttggctac |
26862227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 25492687 - 25492914
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| || ||||| | || ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
25492687 |
ttcaaattgatcagcaatgaagttatagattgattttgcaagtgttgatttacctaagcctccagtaccataaagtcctaccatgtggaactcatcctca |
25492786 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| ||| || |||||||||||||| |||| || |||||| ||||| |||||||||| |||||| |||| ||| ||||| ||||||| | | |||| |
|
|
| T |
25492787 |
gatacctcatctagaagcaatttcacgtgttgtactcgggattgtaatccaacagggtatttggcaacatgtaatgaaacacgattgatcctatccgaga |
25492886 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaactt |
232 |
Q |
| |
|
||||||||||||| |||||||||||||| |
|
|
| T |
25492887 |
tgtcttcgactatattctcaataaactt |
25492914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 25511640 - 25511518
Alignment:
| Q |
117 |
agaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggagatgtcttcgacta |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||| ||||||||| || || |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
25511640 |
agaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctacgttcaaaaaaacatgattgatcttgttggagatgtcttcgacta |
25511541 |
T |
|
| Q |
217 |
tcttctcaataaacttgtattca |
239 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
25511540 |
tcttctcaataaacttgtattca |
25511518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 27337463 - 27337686
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||| | || ||| |
|
|
| T |
27337463 |
ttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatca |
27337562 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| ||| |||||||||||||| ||||||| || |||||||||||| |||||||||| |||||| || | || |||||| ||||||| | | ||| | |
|
|
| T |
27337563 |
gattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacagggtatttggcaacgtgtagaaaaacacgattgatcctatcggaaa |
27337662 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataa |
228 |
Q |
| |
|
||| ||||||||| |||||||||| |
|
|
| T |
27337663 |
tgtgttcgactatattctcaataa |
27337686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 27398203 - 27398426
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||| | || ||| |
|
|
| T |
27398203 |
ttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatca |
27398302 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| ||| |||||||||||||| ||||||| || |||||||||||| |||||||||| |||||| || | || |||||| ||||||| | | ||| | |
|
|
| T |
27398303 |
gattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacagggtatttggcaacgtgtagaaaaacacgattgatcctatcggaaa |
27398402 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataa |
228 |
Q |
| |
|
||| ||||||||| |||||||||| |
|
|
| T |
27398403 |
tgtgttcgactatattctcaataa |
27398426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27530669 - 27530904
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
27530669 |
ttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacctatgcctccagtaccataaagtcctaccatgtggacctcatcatca |
27530768 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| | |||||| || |||||| |||| || |||||||||||| |||||||| | |||||| |||| |||| || || | || ||||||| | |
|
|
| T |
27530769 |
gatttttcatcaagatgccctttcacatgttgtactcgggactgtaatccaacaggatatttggcaacatctaagggctcacgactaatcctgttggaaa |
27530868 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||| |
|
|
| T |
27530869 |
tgtcttcgactatctttccaataaactcgtattcat |
27530904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 28787052 - 28786817
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
28787052 |
ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatca |
28786953 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| |||||||||||| || ||| ||||| || |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
28786952 |
gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggaga |
28786853 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||| | |||||||||||||||||| |
|
|
| T |
28786852 |
tgtatttgactatatctccaataaacttgtattcat |
28786817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 28793173 - 28792938
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
28793173 |
ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatca |
28793074 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| |||||||||||| || ||| ||||| || |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
28793073 |
gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggaga |
28792974 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||| | |||||||||||||||||| |
|
|
| T |
28792973 |
tgtatttgactatatctccaataaacttgtattcat |
28792938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27717867 - 27718102
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
27717867 |
ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca |
27717966 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| | | ||||||||| |||||||||||| || ||| ||||| || |||||||||| ||||| |||| |||| | || || | |||||||||| |
|
|
| T |
27717967 |
gatctttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggaga |
27718066 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| ||||||||| |||||||| |
|
|
| T |
27718067 |
tgtatttgactatctctccaataaactcgtattcat |
27718102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 28781915 - 28781680
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||| ||| |
|
|
| T |
28781915 |
ttcaaattgatcagcaattaagttataaactgcttttacaagtgttgatttacccaagcctccagtaccataaagtcctaccatcctgactccattatca |
28781816 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| || | |||||||| |||||||||||| || |||||||||||| |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
28781815 |
tatccttcaccaagaagcgatttcacttgttgtactcgggactgtaatccaacagggtaattggcaacatgtaagtgctgacgactgatcttgttggaga |
28781716 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||| | |||||||||||||||||| |
|
|
| T |
28781715 |
tgtatttgactatatcgccaataaacttgtattcat |
28781680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 26624085 - 26623861
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||| ||||| | |||| |||||||||||||||| |||| ||||||| | ||||| | ||| ||||| ||||| |||| ||| |
|
|
| T |
26624085 |
ttcaaattgatcagcaacaaagttatagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatca |
26623986 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || |||||||| |||||||||||| || | | |||||||| |||||||||| ||| || |||| |||| ||| ||||||| |||||||||| |
|
|
| T |
26623985 |
gatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggaga |
26623886 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaa |
229 |
Q |
| |
|
||| || ||||||||| |||||||| |
|
|
| T |
26623885 |
tgtatttgactatcttttcaataaa |
26623861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 26730062 - 26729838
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||| ||||| | |||| |||||||||||||||| |||| ||||||| | ||||| | ||| ||||| ||||| |||| ||| |
|
|
| T |
26730062 |
ttcaaattgatcagcaacaaagttatagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatca |
26729963 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || |||||||| |||||||||||| || | | |||||||| |||||||||| ||| || |||| |||| ||| ||||||| |||||||||| |
|
|
| T |
26729962 |
gatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggaga |
26729863 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaa |
229 |
Q |
| |
|
||| || ||||||||| |||||||| |
|
|
| T |
26729862 |
tgtatttgactatcttttcaataaa |
26729838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27610488 - 27610723
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
27610488 |
ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca |
27610587 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| | | ||||||||| ||||||||| || || | | ||||| || |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
27610588 |
gatctttcatcaagaagcgatttcacttcttgtacttgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactgatcttgttggaga |
27610687 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| || |||||| |||||||| |
|
|
| T |
27610688 |
tgtatttgactatctctccagtaaactcgtattcat |
27610723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 27604072 - 27604215
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
27604072 |
ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca |
27604171 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactg |
148 |
Q |
| |
|
|| | | |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
27604172 |
gatctttcatcaagaagagatttcacttgttgtactcgagactg |
27604215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27705772 - 27706007
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| | ||| ||| ||| ||||| ||||| |||| ||| |
|
|
| T |
27705772 |
ttcaaattgatcagcaacaaaattataaattgctcttgcaagtgttgatttacccaagcctccaatgccaaaaattccaaccatatggaccccatcatca |
27705871 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| |||| |||||||| |||||||||||| || ||| ||||| || |||||||||| |||| |||| |||| | || |||| |||||||||| |
|
|
| T |
27705872 |
ggtccctcatcaagaagtgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggatgtcgactgatcttgttggaga |
27705971 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||| |||||| ||||||||||| |
|
|
| T |
27705972 |
tgtatttgactatctttccaataagcttgtattcat |
27706007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 26803260 - 26803025
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| ||||||| | ||||||| ||| ||||| ||||| |||| ||| |
|
|
| T |
26803260 |
ttcaaattgatcagcaacaaaattatagattgctcttgcaagtgctgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatca |
26803161 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| |||| ||||||||| ||||||||| || || ||| || || || |||||||||| || || |||| |||| | ||||||| |||||||||| |
|
|
| T |
26803160 |
ggtccctcatcaagaagcgatttcacttcttgtactcgagagtgcaatccaacagggtaattagcaacatgtaagggctgacgattgatcttgttggaga |
26803061 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| |||| ||||||||||||| |
|
|
| T |
26803060 |
tgtatttgactatctctccaatcaacttgtattcat |
26803025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27426980 - 27427215
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| | ||||||| ||| ||||| ||||| |||| ||| |
|
|
| T |
27426980 |
ttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatca |
27427079 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| |||| ||||||||| |||||||||||| || ||| ||||| || |||||||||| |||| |||| |||| | || |||| |||||||||| |
|
|
| T |
27427080 |
ggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggaga |
27427179 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||| |||||| || |||||||| |
|
|
| T |
27427180 |
tgtatttgactatctttccaataagctcgtattcat |
27427215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27592389 - 27592624
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||| |||||||||||||| |||| ||||||| | ||||||| ||| ||||| ||||| ||| ||| |
|
|
| T |
27592389 |
ttcaaattgatcagcaataaagttataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatca |
27592488 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| |||||||||||| || ||| ||||| || |||||||||| |||| ||||||||| || |||| |||||||||| |
|
|
| T |
27592489 |
gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatttaagggctgtcgactgatcttgttggaga |
27592588 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||| |||||| ||||||||||| |
|
|
| T |
27592589 |
tgtatttgactatctttccaataagcttgtattcat |
27592624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27676988 - 27677223
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||| ||||||| | ||||||| ||| ||||| ||||| ||| ||| |
|
|
| T |
27676988 |
ttcaaattgatcagcaataaaattataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatca |
27677087 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| |||||| ||||| || ||| ||||| || |||||||||| |||| |||| |||| ||| |||| |||||||||| |
|
|
| T |
27677088 |
gatccttcatcaagaagcgatttcatttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggttgttgactgatcttgttggaga |
27677187 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||| |||||| ||||||||||| |
|
|
| T |
27677188 |
tgtatttgactatctttccaataagcttgtattcat |
27677223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 217
Target Start/End: Complemental strand, 31285372 - 31285161
Alignment:
| Q |
6 |
tcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctcag |
105 |
Q |
| |
|
|||||||||||| ||| ||||||||| | |||| ||||||||||||||||||||| |||||| | |||||||||||||||||| | ||| | | | || |
|
|
| T |
31285372 |
tcaaattgatcaccaataaaattatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtgtacccctttattag |
31285273 |
T |
|
| Q |
106 |
agcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggagat |
205 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||| ||| || |||||||||| ||||| |||| |||| ||| ||||||| ||||||||||| |
|
|
| T |
31285272 |
tttccttatcaagaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatgtaagggcacacgattgatcttgttggagat |
31285173 |
T |
|
| Q |
206 |
gtcttcgactat |
217 |
Q |
| |
|
|| || |||||| |
|
|
| T |
31285172 |
gtatttgactat |
31285161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 26824633 - 26824464
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||| |||||||| | ||||| || |||||||||||||||||||||||| | |||||| |||| |||||||||||||| ||||| |||| ||| |
|
|
| T |
26824633 |
ttcaaatttatcagcaatagaattaaaagttgcttttgcaagtgttgatttacctaaacctccaataccgtaaagtcctaccatatggaccacatcatca |
26824534 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacat |
174 |
Q |
| |
|
|| | || |||||||| |||||||||||| || |||||||||||| ||||| |||| |||||| |||| |
|
|
| T |
26824533 |
gattcgttatcaagaagagatttcacttgttgtactcgggactgtaatccaaccgggtatttggcaacat |
26824464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 27697954 - 27698189
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||||||||| |||||||| | |||| |||||||||||||||| |||| ||||||| | ||| ||| ||| ||||| ||||| |||| ||| |
|
|
| T |
27697954 |
ttcaaattgatcagcaaccaaattatagattgctcttgcaagtgttgattttcccaagcctccaatcccaaaaattccaaccatatggaccccatcatca |
27698053 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || ||||||| |||||||| || || | | |||||||| |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
27698054 |
gatccattatcaagaattgatttcactctttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggaga |
27698153 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| ||||||||||||||||||| |
|
|
| T |
27698154 |
tgtatttgactatctcttcaataaacttgtattcat |
27698189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25511710 - 25511640
Alignment:
| Q |
1 |
cactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagta |
71 |
Q |
| |
|
||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25511710 |
cactttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctctagta |
25511640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 27679760 - 27679529
Alignment:
| Q |
9 |
aattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctcagagc |
108 |
Q |
| |
|
|||||||| |||||||||||||| | | | |||||||||||||||| |||| |||||| | ||||||| ||| ||||| ||||| |||| || || | |
|
|
| T |
27679760 |
aattgatctgcaacaaaattatagatttgtcttgcaagtgttgatttccccaaacctccaatgccataaattccaaccatatggaccccatcatcggatc |
27679661 |
T |
|
| Q |
109 |
ccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggagatgtc |
208 |
Q |
| |
|
||| ||||||||| |||||||||||| || ||| ||||| || |||||||||| |||| |||| |||| || |||| ||||||||||||| |
|
|
| T |
27679660 |
cctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggctgtcgactgatcttgttggagatgta |
27679561 |
T |
|
| Q |
209 |
ttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|| ||||||||| |||||| ||||||||||| |
|
|
| T |
27679560 |
tttgactatctttccaataagcttgtattcat |
27679529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 28140349 - 28140295
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
59 |
Q |
| |
|
|||||||||||| |||| ||||||||||| ||||| ||||||||||| ||||||| |
|
|
| T |
28140349 |
ttcaaattgatcggcaataaaattataaattgcttgtgcaagtgttgttttaccc |
28140295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 26849526 - 26849461
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagt |
70 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||| |||||||| |
|
|
| T |
26849526 |
ttcaaattgatcagcaatcgaattataaactgcttgagcaagtgttgtttttcccattcctccagt |
26849461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 26937846 - 26937790
Alignment:
| Q |
2 |
actttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacc |
58 |
Q |
| |
|
|||||||||||||||| ||| |||||||||| |||| |||||||||||||||||| |
|
|
| T |
26937846 |
actttcaaattgatcaccaatcaaattataaattgctcgtgcaagtgttgatttacc |
26937790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 28097811 - 28097857
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg |
51 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
28097811 |
ttcaaattgaccagcaatgaaattataaaccgcttttgcaagtgttg |
28097857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 26975765 - 26975700
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagt |
70 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||| |||||||||| |||||||| || ||||| |
|
|
| T |
26975765 |
ttcaaattgattagcaatcaaattataaactgcttgagcaagtgttgtcttacccattcccccagt |
26975700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 28127043 - 28127278
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||| |
|
|
| T |
28127043 |
ttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacccaagcctccaataccataaagtcctaccatgtggacctcatcatca |
28127142 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| ||||| || |||||||| |||||||||| || | || |||||| |||||||| | |||||| |||| |||||||||| ||||||| ||| ||| | |
|
|
| T |
28127143 |
tatcccttatcgagaagcaaattcacttgttgtacttggtcctgtaatccaacaggatatttggcaacatgtaagaaaacacgattgatcctgtcggata |
28127242 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|||||| || |||||||| ||||||||||||||||| |
|
|
| T |
28127243 |
tgtctttgattatcttctgaataaacttgtattcat |
28127278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 28163743 - 28163978
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||| |
|
|
| T |
28163743 |
ttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacccaagcctccagtatcataaagtcctaccatgtggacctcatcatca |
28163842 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| ||||| || ||||||||||||||||||| || | | || ||||| |||||||| | ||| || |||| ||| |||||| ||||||| ||| |||| |
|
|
| T |
28163843 |
tatcccttatcgagaagcaatttcacttgttgtacttgagattgtaatccaacaggatattttgcaacatgtaaaaaaacacgattgatcctgtcggagg |
28163942 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|| ||| || ||||| || ||||||||||||||||| |
|
|
| T |
28163943 |
tgcctttgattatctcctgaataaacttgtattcat |
28163978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 267708 - 267943
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||| ||||||| ||||||||||||| ||||||| | ||||||| ||| ||||| ||||| |||| ||| |
|
|
| T |
267708 |
ttcaaattgatcagcaataaaattatagattgctcttgcaagggttgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatca |
267807 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || |||||||||||||||||||||| || | | ||| ||| |||||||||| ||||| |||| |||| || || |||| |||||||||| |
|
|
| T |
267808 |
gatccattatcaagaagcaatttcacttgttgtacttgagaccataatccaacagggtaattggcaacatgtaagggctcacgactgatcttgttggaga |
267907 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| |||||||||||||||||| |
|
|
| T |
267908 |
tgtatttgactatctctccaataaacttgtattcat |
267943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 8301 - 8066
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
8301 |
ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatca |
8202 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| ||||||| |||| || ||| |||||||| |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
8201 |
gatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggaga |
8102 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||| | |||||||||||||||||| |
|
|
| T |
8101 |
tgtatttgactatatcgccaataaacttgtattcat |
8066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 13043 - 13278
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
13043 |
ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatca |
13142 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| ||||||| |||| || ||| |||||||| |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
13143 |
gatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggaga |
13242 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||| | |||||||||||||||||| |
|
|
| T |
13243 |
tgtatttgactatatcgccaataaacttgtattcat |
13278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 4080 - 4315
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || | ||| ||| |
|
|
| T |
4080 |
ttcaaattcatcagcaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtgggctccatgatca |
4179 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || | ||||||||| ||||||| |||| || ||| |||||||| |||||||||| ||||| |||| |||| |||| |||| |||||||||| |
|
|
| T |
4180 |
gatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgatgactgatcttgttggaga |
4279 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| | |||||||| |||||||||||||||||| |
|
|
| T |
4280 |
tgttcttgactatctctccaataaacttgtattcat |
4315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 18698764 - 18698999
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |||| ||| |
|
|
| T |
18698764 |
ttcaaattgatcagcaataaaattataaattgctttcgcaagtgttgatttacccatgcctccaatgccataaagtcctaacatgcggactccatcatca |
18698863 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || ||||||||| ||||||||||| || ||| ||||| || |||||||||| ||||| |||| |||| | || |||| |||||||||| |
|
|
| T |
18698864 |
gatcctttatcaagaagcgctttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggaga |
18698963 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
|| || |||||| | |||||||||||||||||| |
|
|
| T |
18698964 |
cgtatttgactatatctccaataaacttgtattcat |
18698999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 18730868 - 18731103
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| | |||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||| || | | | |
|
|
| T |
18730868 |
ttcaaattgatcagcaataaaattataaattactttagcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccataa |
18730967 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || ||||||||| |||||||||||| || ||| ||||| ||||||||||||| |||| |||| |||| | || |||| |||||||||| |
|
|
| T |
18730968 |
gatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggtaaatggcaacatgtaagggctgacgactgatcttgttggaga |
18731067 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
| || ||||||||| ||||||||||||||||||| |
|
|
| T |
18731068 |
catatttgactatcttttcaataaacttgtattcat |
18731103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 18723449 - 18723606
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| || | | | |
|
|
| T |
18723449 |
ttcaaattgatcagcaataaaattataaattccttttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatta |
18723548 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggt |
162 |
Q |
| |
|
|| || || ||||||||| |||||||||||| || ||| ||||| ||||||||||||| |
|
|
| T |
18723549 |
gatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggt |
18723606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 18678924 - 18679098
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||| | | |
|
|
| T |
18678924 |
ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttaatttacccatgcctccaatgccataaagtcctaccatgcggactccatcataa |
18679023 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaag |
179 |
Q |
| |
|
|| | | ||||||||| |||||||||||| || ||| ||||| || |||||||||| ||||| |||| |||| |
|
|
| T |
18679024 |
gatcattcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaag |
18679098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 18654841 - 18654998
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| | |||||| || || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| || | ||| |
|
|
| T |
18654841 |
ttcaaattgatcagcaatacaattattaattgattttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatca |
18654940 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggt |
162 |
Q |
| |
|
|| || || ||||||||| |||||||||||| || ||| ||||| ||||||||||||| |
|
|
| T |
18654941 |
gatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggt |
18654998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 18074575 - 18074340
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| | ||||||| ||| ||||| ||||| |||| ||| |
|
|
| T |
18074575 |
ttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatca |
18074476 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| |||| ||||||||| |||||||||||| || ||| ||||| || |||||||||| |||| |||| |||| | || |||| |||||||||| |
|
|
| T |
18074475 |
ggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggaga |
18074376 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||| |||||| || |||||||| |
|
|
| T |
18074375 |
tgtatttgactatctttccaataagctcgtattcat |
18074340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 5090321 - 5090392
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata |
76 |
Q |
| |
|
||||||||||| ||||| ||||| |||| ||||||| ||||||| | ||||||||| |||||||| ||||| |
|
|
| T |
5090321 |
ttcaaattgatgagcaatgaaattgtaaattgcttttccaagtgtggttttacccattcctccagtcccata |
5090392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 2907 - 3142
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
2907 |
ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca |
3006 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| | | ||||||||| |||||||||||| || ||| |||| | |||||||||| ||||| |||| |||| | || || | |||||||||| |
|
|
| T |
3007 |
gatctttcatcaagaagcgatttcacttgttgtactcgagacttcattccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggaga |
3106 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| ||||||||| |||||||| |
|
|
| T |
3107 |
tgtatttgactatctctccaataaactcgtattcat |
3142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 60383 - 60148
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| | ||||||| ||| ||||| ||||| |||| ||| |
|
|
| T |
60383 |
ttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatca |
60284 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
| |||| ||||||||| |||||||||||| || ||| ||||| || |||||||||| |||| |||| |||| | || |||| |||||||||| |
|
|
| T |
60283 |
ggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggaga |
60184 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || ||||||||| |||||| || |||||||| |
|
|
| T |
60183 |
tgtatttgactatctttccaataagctcgtattcat |
60148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 29273206 - 29273441
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
104 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||| ||||||| ||||||||||||| ||| ||| | ||||||| ||| ||||| ||| | |||| ||| |
|
|
| T |
29273206 |
ttcaaattgatcagcaaaaaaattatagattgctcttgcaagggttgatttacccaagccaccaatcccataaattccaaccatatggatcccatcatca |
29273305 |
T |
|
| Q |
105 |
gagcccttgtcaagaagcaatttcacttgttctattcgggactgtaacccaacagggtctttggctacatttaagaaaacatgattgatattgttggaga |
204 |
Q |
| |
|
|| || || ||||||||| |||| ||||||| || | | |||||||| |||||||||| |||||| |||| |||| || | |||| |||||||||| |
|
|
| T |
29273306 |
gatccattatcaagaagcgatttgacttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggaga |
29273405 |
T |
|
| Q |
205 |
tgtcttcgactatcttctcaataaacttgtattcat |
240 |
Q |
| |
|
||| || |||||||| | |||||||||||||||| |
|
|
| T |
29273406 |
tgtatttgactatctctccgataaacttgtattcat |
29273441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 3280473 - 3280410
Alignment:
| Q |
5 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
68 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| ||||||| |||| |||||||| |||||| |
|
|
| T |
3280473 |
ttcaaattgattagcaatgaaattataaactgctcttgcaagagttgtcttacccattcctcca |
3280410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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