View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1317A-Insertion-19 (Length: 651)

Name: NF1317A-Insertion-19
Description: NF1317A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1317A-Insertion-19
NF1317A-Insertion-19
[»] chr6 (104 HSPs)
chr6 (8-447)||(26142791-26143227)
chr6 (8-447)||(25579645-25580081)
chr6 (8-448)||(26055852-26056289)
chr6 (8-448)||(26075822-26076259)
chr6 (8-448)||(25538466-25538903)
chr6 (8-447)||(25481668-25482104)
chr6 (8-321)||(26048771-26049081)
chr6 (8-321)||(26069940-26070250)
chr6 (15-446)||(27337894-27338319)
chr6 (15-446)||(27398634-27399059)
chr6 (15-448)||(26655922-26656349)
chr6 (15-448)||(26761893-26762320)
chr6 (26-447)||(26646423-26646838)
chr6 (26-447)||(26752391-26752806)
chr6 (490-648)||(25538945-25539103)
chr6 (490-648)||(26143270-26143428)
chr6 (15-228)||(27698535-27698748)
chr6 (15-433)||(27718218-27718633)
chr6 (19-448)||(27678883-27679309)
chr6 (15-228)||(27611043-27611256)
chr6 (15-228)||(27724886-27725099)
chr6 (15-197)||(27229165-27229347)
chr6 (494-648)||(25580128-25580282)
chr6 (15-233)||(27531233-27531451)
chr6 (15-272)||(27604702-27604959)
chr6 (19-448)||(27592844-27593270)
chr6 (25-302)||(26622919-26623193)
chr6 (25-302)||(26728897-26729171)
chr6 (19-270)||(27677613-27677864)
chr6 (25-228)||(26884106-26884311)
chr6 (15-423)||(28781072-28781477)
chr6 (15-228)||(26802375-26802588)
chr6 (15-423)||(28786211-28786616)
chr6 (15-423)||(28792332-28792737)
chr6 (19-214)||(31284225-31284420)
chr6 (490-648)||(25483462-25483619)
chr6 (490-645)||(26056325-26056479)
chr6 (490-645)||(26076295-26076449)
chr6 (16-421)||(26823774-26824176)
chr6 (25-228)||(27706443-27706646)
chr6 (127-270)||(27427605-27427748)
chr6 (490-645)||(25511345-25511495)
chr6 (15-216)||(26861549-26861750)
chr6 (64-239)||(28149920-28150094)
chr6 (15-222)||(28181047-28181254)
chr6 (15-210)||(28234497-28234692)
chr6 (49-267)||(28242771-28242989)
chr6 (15-222)||(28185299-28185506)
chr6 (22-401)||(26848600-26848976)
chr6 (49-222)||(28226917-28227090)
chr6 (49-222)||(28297760-28297933)
chr6 (49-222)||(28514140-28514313)
chr6 (163-423)||(27214498-27214758)
chr6 (163-423)||(27234470-27234730)
chr6 (53-217)||(28325452-28325616)
chr6 (98-229)||(26341974-26342105)
chr6 (61-284)||(28139520-28139743)
chr6 (52-227)||(26937064-26937239)
chr6 (103-342)||(28098299-28098535)
chr6 (66-200)||(25506978-25507112)
chr6 (504-648)||(26646894-26647039)
chr6 (504-648)||(26752862-26753007)
chr6 (15-200)||(29825960-29826145)
chr6 (163-211)||(2184369-2184417)
chr6 (164-212)||(26975134-26975182)
chr6 (164-231)||(25071741-25071808)
chr6 (378-448)||(27677438-27677508)
chr6 (378-448)||(27706226-27706296)
chr6 (295-404)||(25506852-25506961)
chr6 (330-415)||(26617867-26617952)
chr6 (330-415)||(26723795-26723880)
chr6 (164-228)||(2184980-2185044)
chr6 (369-448)||(26802726-26802805)
chr6 (19-214)||(26949598-26949793)
chr6 (314-401)||(26959395-26959482)
chr6 (571-621)||(27337728-27337778)
chr6 (571-621)||(27398468-27398518)
chr6 (547-619)||(27427263-27427335)
chr6 (547-624)||(27604348-27604427)
chr6 (558-624)||(27592665-27592731)
chr6 (163-217)||(27665169-27665223)
chr6 (558-624)||(27679422-27679488)
chr6 (378-448)||(27698318-27698388)
chr6 (547-624)||(26802904-26802981)
chr6 (330-415)||(26811754-26811839)
chr6 (547-648)||(27214911-27215012)
chr6 (558-619)||(27706053-27706114)
chr6 (368-408)||(28098221-28098261)
chr6 (326-386)||(28234804-28234864)
chr6 (560-624)||(28781575-28781639)
chr6 (560-624)||(28786712-28786776)
chr6 (560-624)||(28792833-28792897)
chr6 (413-448)||(25511268-25511303)
chr6 (166-217)||(26635774-26635825)
chr6 (314-401)||(26635919-26636006)
chr6 (166-217)||(26741740-26741791)
chr6 (314-401)||(26741885-26741972)
chr6 (310-401)||(26975277-26975368)
chr6 (19-66)||(27427806-27427853)
chr6 (166-212)||(26959250-26959296)
chr6 (558-624)||(27698230-27698296)
chr6 (326-439)||(28185607-28185720)
chr6 (324-401)||(28297584-28297661)
chr6 (324-401)||(28514412-28514489)
[»] chr1 (3 HSPs)
chr1 (26-421)||(268195-268587)
chr1 (26-422)||(28127516-28127910)
chr1 (26-422)||(28164200-28164592)
[»] chr4 (11 HSPs)
chr4 (37-446)||(18731320-18731723)
chr4 (26-423)||(18655313-18655707)
chr4 (15-446)||(18723901-18724326)
chr4 (15-446)||(18679383-18679808)
chr4 (26-420)||(18699239-18699630)
chr4 (127-270)||(18073807-18073950)
chr4 (127-221)||(17989088-17989182)
chr4 (15-272)||(5090951-5091208)
chr4 (547-619)||(18074220-18074292)
chr4 (19-66)||(17989240-17989287)
chr4 (19-62)||(18073702-18073745)
[»] chr8 (1 HSPs)
chr8 (26-421)||(29273621-29274013)
[»] scaffold0349 (4 HSPs)
scaffold0349 (15-228)||(3462-3676)
scaffold0349 (15-228)||(14397-14609)
scaffold0349 (347-433)||(3259-3345)
scaffold0349 (378-433)||(14195-14250)
[»] scaffold0277 (3 HSPs)
scaffold0277 (15-421)||(4522-4925)
scaffold0277 (15-421)||(13483-13886)
scaffold0277 (567-624)||(13319-13376)
[»] scaffold0419 (2 HSPs)
scaffold0419 (15-421)||(7458-7861)
scaffold0419 (567-624)||(7968-8025)
[»] scaffold0003 (3 HSPs)
scaffold0003 (127-270)||(59615-59758)
scaffold0003 (547-619)||(60028-60100)
scaffold0003 (19-62)||(59510-59553)
[»] scaffold1254 (1 HSPs)
scaffold1254 (15-149)||(37-171)
[»] scaffold0038 (5 HSPs)
scaffold0038 (15-222)||(34658-34865)
scaffold0038 (49-267)||(42933-43151)
scaffold0038 (49-222)||(27415-27588)
scaffold0038 (53-217)||(116767-116931)
scaffold0038 (326-386)||(34966-35026)
[»] scaffold0019 (1 HSPs)
scaffold0019 (15-217)||(58334-58536)
[»] chr2 (3 HSPs)
chr2 (64-217)||(3279670-3279823)
chr2 (19-217)||(17993736-17993934)
chr2 (368-408)||(3279986-3280026)
[»] chr5 (1 HSPs)
chr5 (14-210)||(16688943-16689139)
[»] scaffold0012 (1 HSPs)
scaffold0012 (90-122)||(214481-214513)


Alignment Details
Target: chr6 (Bit Score: 378; Significance: 0; HSPs: 104)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 8 - 447
Target Start/End: Original strand, 26142791 - 26143227
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26142791 gcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacc 26142890  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26142891 atcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 26142990  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||| |||||||||||    
T  26142991 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaa---atcagagtgggatttatggtgagc 26143087  T
Q  308 atcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccgg 407  Q
    |||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  26143088 atcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccgg 26143187  T
Q  408 ctatcattatagtcctcatgggtaccccactttacttaaa 447  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26143188 ctatcattatagtcctcatgggtaccccactttacttaaa 26143227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 8 - 447
Target Start/End: Original strand, 25579645 - 25580081
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| |||||    
T  25579645 gcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatgatcttcaaagaggagatgaaatcacacc 25579744  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25579745 atcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 25579844  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||     
T  25579845 attcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacga---catcagagtgggagttatggtgagt 25579941  T
Q  308 atcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccgg 407  Q
    |||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25579942 atcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg 25580041  T
Q  408 ctatcattatagtcctcatgggtaccccactttacttaaa 447  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25580042 ctatcattatagtcctcatgggtaccccactttacttaaa 25580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 8 - 448
Target Start/End: Original strand, 26055852 - 26056289
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||| ||| |    
T  26055852 gcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatc 26055951  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26055952 atcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 26056051  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||    
T  26056052 attcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacga---catcagagtgggagttatggtgagc 26056148  T
Q  308 atcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccgg 407  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26056149 atcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccgg 26056248  T
Q  408 ctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  26056249 ctatcattatagtcctcatgagtaccctactttacttaaat 26056289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 8 - 448
Target Start/End: Original strand, 26075822 - 26076259
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||| ||| |    
T  26075822 gcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatc 26075921  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26075922 atcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 26076021  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||    
T  26076022 attcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacga---catcagagtgggagttatggtgagc 26076118  T
Q  308 atcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccgg 407  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26076119 atcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccgg 26076218  T
Q  408 ctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  26076219 ctatcattatagtcctcatgagtaccctactttacttaaat 26076259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 8 - 448
Target Start/End: Original strand, 25538466 - 25538903
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  25538466 gcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgataatgatcttgaaagaggagatgaaatcacacc 25538565  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25538566 atcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccagatc 25538665  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||   ||||| |||||||||||||||||||    
T  25538666 attcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcagttacga---catcagagtgggagttatggtgagc 25538762  T
Q  308 atcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccgg 407  Q
    || ||||||||||| |||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  25538763 attttactaagcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccgg 25538862  T
Q  408 ctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25538863 ctatcattatagtcctcatgggtaccccactttacttaaat 25538903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 8 - 447
Target Start/End: Original strand, 25481668 - 25482104
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  25481668 gcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatgatcttcaaagaggagatgaaatcacacc 25481767  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25481768 atcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 25481867  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |  | |||  ||||  | ||   |||||||||||      
T  25481868 attcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatcctactgatgttcgacgtcatacatgt---agttatggtgaat 25481964  T
Q  308 atcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccgg 407  Q
    |||| ||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  25481965 atctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaatttgtccgg 25482064  T
Q  408 ctatcattatagtcctcatgggtaccccactttacttaaa 447  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  25482065 ctatcattatagtcctcatgagtaccccactttacttaaa 25482104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 321
Target Start/End: Original strand, 26048771 - 26049081
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26048771 gcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacc 26048870  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26048871 caaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 26048970  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||   ||||| ||||| |||||||||||||    
T  26048971 attcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacga---catcatagtggaagttatggtgagc 26049067  T
Q  308 atcttactaagcat 321  Q
    ||||||||||||||    
T  26049068 atcttactaagcat 26049081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 321
Target Start/End: Original strand, 26069940 - 26070250
Alignment:
Q  8 gcaacaattttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacacc 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26069940 gcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacc 26070039  T
Q  108 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 207  Q
       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26070040 caaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 26070139  T
Q  208 attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagc 307  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||   ||||| ||||| |||||||||||||    
T  26070140 attcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacga---catcatagtggaagttatggtgagc 26070236  T
Q  308 atcttactaagcat 321  Q
    ||||||||||||||    
T  26070237 atcttactaagcat 26070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 15 - 446
Target Start/End: Complemental strand, 27338319 - 27337894
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||||||||||||||||    || ||||||||||| || ||||||||||||||||||||||  ||||||||||||    
T  27338319 ttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcactt 27338220  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27338219 gtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcact 27338120  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttac 314  Q
    |||||||||||| | |||| |  || || || |||||||||| || ||| ||||||||| |||||   ||||| | ||||||||||||||||||||||||    
T  27338119 gctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacga---catcagactgggagttatggtgagcatcttac 27338023  T
Q  315 taagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcat 414  Q
    ||||||| |||| ||||||||||||||| |||||||||||||| | |||    |||||||||||||||||||||||||||||||||| |||||| | |||    
T  27338022 taagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccat 27337923  T
Q  415 tatagtcctcatgggtaccccactttacttaa 446  Q
    | |||   ||| ||||||||||||||||||||    
T  27337922 tttag---tcaagggtaccccactttacttaa 27337894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 15 - 446
Target Start/End: Complemental strand, 27399059 - 27398634
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||||||||||||||||    || ||||||||||| || ||||||||||||||||||||||  ||||||||||||    
T  27399059 ttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcactt 27398960  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27398959 gtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcact 27398860  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttac 314  Q
    |||||||||||| | |||| |  || || || |||||||||| || ||| ||||||||| |||||   ||||| | ||||||||||||||||||||||||    
T  27398859 gctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacga---catcagactgggagttatggtgagcatcttac 27398763  T
Q  315 taagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcat 414  Q
    ||||||| |||| ||||||||||||||| |||||||||||||| | |||    |||||||||||||||||||||||||||||||||| |||||| | |||    
T  27398762 taagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccat 27398663  T
Q  415 tatagtcctcatgggtaccccactttacttaa 446  Q
    | |||   ||| ||||||||||||||||||||    
T  27398662 tttag---tcaagggtaccccactttacttaa 27398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 448
Target Start/End: Original strand, 26655922 - 26656349
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||||||| |||||||| | ||||||||||||||| |||||||||   |||||||||||||| |||||||||||     
T  26655922 ttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactc 26656021  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26656022 gttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcatt 26656121  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttac 314  Q
    |||| ||||||||| |||| |  || || || |||||||||| |||||| |||||||||||||||   ||||| | ||| ||||| ||||||||||||||    
T  26656122 gctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga---catcagactggaagttacggtgagcatcttac 26656218  T
Q  315 taagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcat 414  Q
    ||||||| || ||||||||||||||||| ||||||||||| || | |||   ||||||||||||||||| ||| ||||||| |||||||| ||||| |||    
T  26656219 taagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctaccat 26656318  T
Q  415 tatagtcctcatgggtaccccactttacttaaat 448  Q
    | |||   ||| ||||||||||||||||||||||    
T  26656319 tgtag---tcaagggtaccccactttacttaaat 26656349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 448
Target Start/End: Original strand, 26761893 - 26762320
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||||||| |||||||| | ||||||||||||||| |||||||||   |||||||||||||| |||||||||||     
T  26761893 ttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactc 26761992  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26761993 gttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcatt 26762092  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttac 314  Q
    |||| ||||||||| |||| |  || || || |||||||||| |||||| |||||||||||||||   ||||| | ||| ||||| ||||||||||||||    
T  26762093 gctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga---catcagactggaagttacggtgagcatcttac 26762189  T
Q  315 taagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcat 414  Q
    ||||||| || ||||||||||||||||| ||||||||||| || | |||   ||||||||||||||||| ||| ||||||| |||||||| ||||| |||    
T  26762190 taagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctaccat 26762289  T
Q  415 tatagtcctcatgggtaccccactttacttaaat 448  Q
    | |||   ||| ||||||||||||||||||||||    
T  26762290 tgtag---tcaagggtaccccactttacttaaat 26762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 26 - 447
Target Start/End: Original strand, 26646423 - 26646838
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||| |||||||||| ||||||||||||||  || ||||||||||||  ||||||| | |||||||||||||| |||||||||||  ||||||||||    
T  26646423 atctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccat 26646522  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
     |||||||||||||||||||||||  | ||||||  ||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  26646523 tgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagaca 26646622  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||| || |  | || || |||||||||||||  ||||| |||||||| |||||    ||||||||||||||||||||||| ||||| ||||||||  |||    
T  26646623 aagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacg---gcatcaaagtgggagttatggtgaacatctcactaagcacgaag 26646719  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcctca 425  Q
    |||  |||||||||||| || |||||| ||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||       
T  26646720 agagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggataccattatagtcc--- 26646816  T
Q  426 tgggtaccccactttacttaaa 447  Q
    ||||||||||||||||||||||    
T  26646817 tgggtaccccactttacttaaa 26646838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 26 - 447
Target Start/End: Original strand, 26752391 - 26752806
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||| |||||||||| ||||||||||||||  || ||||||||||||  ||||||| | |||||||||||||| |||||||||||  ||||||||||    
T  26752391 atctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccat 26752490  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
     |||||||||||||||||||||||  | ||||||  ||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  26752491 tgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagaca 26752590  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||| || |  | || || |||||||||||||  ||||| |||||||| |||||    ||||||||||||||||||||||| ||||| ||||||||  |||    
T  26752591 aagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacg---gcatcaaagtgggagttatggtgaacatctcactaagcacgaag 26752687  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcctca 425  Q
    |||  |||||||||||| || |||||| ||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||       
T  26752688 agagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggataccattatagtcc--- 26752784  T
Q  426 tgggtaccccactttacttaaa 447  Q
    ||||||||||||||||||||||    
T  26752785 tgggtaccccactttacttaaa 26752806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 490 - 648
Target Start/End: Original strand, 25538945 - 25539103
Alignment:
Q  490 cctaaataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 589  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  25538945 cctaaataatctactcttaaaacttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatttatatgtcaaaaaaattagaattgc 25539044  T
Q  590 ataatatattctcaatacatggatgtgattttgattttagtgtatgttctaacttatct 648  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25539045 ataatatattctcaatacatggatgtgattttgattttagtttatgttctaacttatct 25539103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 490 - 648
Target Start/End: Original strand, 26143270 - 26143428
Alignment:
Q  490 cctaaataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 589  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26143270 cctaaataatctactctcaaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 26143369  T
Q  590 ataatatattctcaatacatggatgtgattttgattttagtgtatgttctaacttatct 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  26143370 ataatatattctcaatacatggatgtgattttgattttagtgtattttctaatttatct 26143428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 27698748 - 27698535
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  27698748 ttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 27698649  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27698648 ctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcact 27698549  T
Q  215 gctacaagacaaag 228  Q
    ||||| ||||||||    
T  27698548 gctacgagacaaag 27698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 15 - 433
Target Start/End: Complemental strand, 27718633 - 27718218
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  27718633 ttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 27718534  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  27718533 ctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcact 27718434  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    |||||||||||||| || || | || || || |||||||  |  |||||||||||| || | |||   ||||| |  || |||||||||| ||||| |      
T  27718433 gctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcga---catcagaaaggtagttatggtgaagcat-tgg 27718338  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    || ||||| || ||| ||| |||||| |  || | ||||||||| | ||||  | ||||||  ||||||| | ||| |||||||||||||||||||| ||    
T  27718337 ctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctacca 27718238  T
Q  414 ttatagtcctcatgggtacc 433  Q
    | ||||||||| ||||||||    
T  27718237 tgatagtcctcctgggtacc 27718218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 19 - 448
Target Start/End: Original strand, 27678883 - 27679309
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtca 118  Q
    ||||| |||||||| |||||||||| ||||||||||||    || ||||||||| | |||| |||| |||||||||||||||| |||||||||||| |||    
T  27678883 accgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctca 27678982  T
Q  119 aggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgcta 218  Q
    ||||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27678983 aggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgcta 27679082  T
Q  219 caagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatcttactaa 317  Q
    |||||||||| || || | ||  | || ||||||| || |||||||||||||    | ||| ||| | ||   || |||||||||| ||||| |  || |    
T  27679083 caagacaaagggtcgcctcgttctgcctgttttctttggtgtggaacctactgttgtgcgacatcgtaaa---ggtagttatggtgaagcat-tggctga 27679178  T
Q  318 gcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattat 417  Q
    |||| || ||| ||| |||||| |   | ||||||||||| | ||||    |||||| | |||||| | ||| |||||||||||||||||||| ||| ||    
T  27679179 gcatgaaaagaggtttcaaaatgatccgaaaaacatggagaggttgcaaggatggaaaaaggctctgagccaggctgctaacttgtccggctaccatgat 27679278  T
Q  418 agtcctcatgggtaccccactttacttaaat 448  Q
    ||||||| ||||||||| |||||||||||||    
T  27679279 agtcctcctgggtacccaactttacttaaat 27679309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 27611256 - 27611043
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| |||||||||  ||||||||||||||| |||||||||||     
T  27611256 ttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactc 27611157  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  27611156 ctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcact 27611057  T
Q  215 gctacaagacaaag 228  Q
    ||||||||||||||    
T  27611056 gctacaagacaaag 27611043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 27725099 - 27724886
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  27725099 ttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 27725000  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| | |||||| |||||||||||||||||||||||||| |||||||    
T  27724999 ctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcact 27724900  T
Q  215 gctacaagacaaag 228  Q
    ||||||||||||||    
T  27724899 gctacaagacaaag 27724886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 27229165 - 27229347
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||||     
T  27229165 ttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactc 27229264  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 197  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27229265 gtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 494 - 648
Target Start/End: Original strand, 25580128 - 25580282
Alignment:
Q  494 aataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataa 593  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||| ||||    
T  25580128 aataatctaatcttcaagcttaaataggaacagattttctattaatgtttttaaaacaagtgtaagttaattatatttcaaaaaaggtagaattgaataa 25580227  T
Q  594 tatattctcaatacatggatgtgattttgattttagtgtatgttctaacttatct 648  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25580228 tattttctcaatacatggatgtgattttgattttagtgtatgttctaacttatct 25580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 27531451 - 27531233
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||   ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  27531451 ttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcacta 27531352  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
       || ||||| ||| |||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  27531351 aaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcatt 27531252  T
Q  215 gctacaagacaaagagttg 233  Q
    ||||| | |||||| ||||    
T  27531251 gctacgatacaaagggttg 27531233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 27604959 - 27604702
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||||| ||| ||||||||||| |||||||||  ||||||||||||||| |||||| |||||    
T  27604959 ttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcactt 27604860  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| || ||||| ||||||||||||||  | ||||||  ||| ||||| |||||||| ||||||||||| |||||||| ||||||||||| |    
T  27604859 ctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcatt 27604760  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactca 272  Q
    |||||| ||||||| || || | || || || ||||||| || |||||||||| ||||    
T  27604759 gctacacgacaaagggtcgcgtcgttttgcctgttttctttggtgtggaaccttctca 27604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 448
Target Start/End: Complemental strand, 27593270 - 27592844
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtca 118  Q
    ||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| |||| |||| |||||||| ||||||| |||||||||||| |||    
T  27593270 accggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctca 27593171  T
Q  119 aggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgcta 218  Q
    ||||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||    
T  27593170 aggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgcta 27593071  T
Q  219 caagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatcttactaa 317  Q
    |||||||||| || ||   || || || ||||||| || |||||| ||| ||||  | ||| ||||| ||   || |||||||||| ||||| |  || |    
T  27593070 caagacaaagggtcgccctgttttgcctgttttctttggtgtggatccttctcatgtgcgacatcataaa---ggtagttatggtgaagcat-tggctga 27592975  T
Q  318 gcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattat 417  Q
    |||| || ||| ||| |||||| |   | ||||||||||| | ||||    ||||||    ||||| | ||| |||||||||||||||||||| ||| ||    
T  27592974 gcatgaaaagaggtttcaaaatgatccgaaaaacatggagaggttgcagggatggaaagacgctctgagccaggctgctaacttgtccggctaccatgat 27592875  T
Q  418 agtcctcatgggtaccccactttacttaaat 448  Q
    ||||||| ||||||||| |||||||||||||    
T  27592874 agtcctcctgggtacccaactttacttaaat 27592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 25 - 302
Target Start/End: Original strand, 26622919 - 26623193
Alignment:
Q  25 aatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggcca 124  Q
    |||||||| |||||||||| |||||||||||| |  || ||||||||||||  ||| ||| ||||||| || ||||| | ||||||||||| ||| || |    
T  26622919 aatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgcta 26623018  T
Q  125 tcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagac 224  Q
    ||||||| |||||||||||||||||  | |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  26623019 tcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaac 26623118  T
Q  225 aaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatgg 302  Q
    |||| || |  | || || ||||| |||||||  ||||| ||||||||||||||    ||||||| ||||||||||||    
T  26623119 aaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacg---gcatcaaactgggagttatgg 26623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 25 - 302
Target Start/End: Original strand, 26728897 - 26729171
Alignment:
Q  25 aatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggcca 124  Q
    |||||||| |||||||||| |||||||||||| |  || ||||||||||||  ||| ||| ||||||| || ||||| | ||||||||||| ||| || |    
T  26728897 aatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgcta 26728996  T
Q  125 tcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagac 224  Q
    ||||||| |||||||||||||||||  | |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  26728997 tcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaac 26729096  T
Q  225 aaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatgg 302  Q
    |||| || |  | || || ||||| |||||||  ||||| ||||||||||||||    ||||||| ||||||||||||    
T  26729097 aaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacg---gcatcaaactgggagttatgg 26729171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 27677864 - 27677613
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtca 118  Q
    ||||| |||||||| |||||||||  |||||||||||| |  || ||||||||  || |||| ||| ||||||| |||||||| |||||||||||| |||    
T  27677864 accggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctca 27677765  T
Q  119 aggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgcta 218  Q
    ||||||| ||||| ||||||||||||||| |  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27677764 aggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgcta 27677665  T
Q  219 caagacaaagagttgcttagtatttcccgttttctatgatgtggaacctact 270  Q
    |||||||||| || || | ||  | || ||||||| || |||||||||||||    
T  27677664 caagacaaagggtcgcctcgttctgcctgttttctttgctgtggaacctact 27677613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 26884106 - 26884311
Alignment:
Q  25 aatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggcca 124  Q
    |||||||| |||||||||| | |||||||||| |  || ||||||||||||||| |||||  |||||||   ||||| |||||||||||  |||||||||    
T  26884106 aatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggcca 26884205  T
Q  125 tcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccaca--tcattcactgctacaag 222  Q
    | ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  26884206 ttgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgag 26884305  T
Q  223 acaaag 228  Q
    ||||||    
T  26884306 acaaag 26884311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 15 - 423
Target Start/End: Original strand, 28781072 - 28781477
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  28781072 ttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 28781171  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||||||||||||||||||||||||||  | ||||||  |||||||||  ||||   |||||| |||||||||||||| ||||| ||||| |    
T  28781172 ctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcatt 28781271  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    |||||||||||||  || || | || || || ||||||| || |||||| |||||| |  | |||   ||||| |  ||   |||||||| ||||| |      
T  28781272 gctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcga---catcatacaggtccttatggtgaagcat-tgg 28781367  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    ||   ||| || ||| ||| |||||| |  |||| ||||||||| | |||| |||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  28781368 ctggacatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctacca 28781467  T
Q  414 ttatagtcct 423  Q
    || |||||||    
T  28781468 ttctagtcct 28781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 26802375 - 26802588
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| || |||||||| ||||||||||||||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  26802375 ttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 26802474  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| |    
T  26802475 atcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcatt 26802574  T
Q  215 gctacaagacaaag 228  Q
    |||| |||||||||    
T  26802575 gctataagacaaag 26802588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 15 - 423
Target Start/End: Original strand, 28786211 - 28786616
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  28786211 ttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 28786310  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  | ||   |||||| |||||||||||||| ||||| ||||| |    
T  28786311 ctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcatt 28786410  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    |||||||||||||  || || | || || || ||||||| || ||| || |||||| |  | |||   ||||| |  ||  ||||||||| ||||| |      
T  28786411 gctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcctactaatgtgcga---catcatacaggtcgttatggtgaagcat-tgg 28786506  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    ||  |||| || ||| ||| |||||| |  |||| ||||||||| | |||| |||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  28786507 ctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctacca 28786606  T
Q  414 ttatagtcct 423  Q
    || |||||||    
T  28786607 ttctagtcct 28786616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 15 - 423
Target Start/End: Original strand, 28792332 - 28792737
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  28792332 ttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 28792431  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  | ||   |||||| |||||||||||||| ||||| ||||| |    
T  28792432 ctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcatt 28792531  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    |||||||||||||  || || | || || || ||||||| || ||| || |||||| |  | |||   ||||| |  ||  ||||||||| ||||| |      
T  28792532 gctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcctactaatgtgcga---catcatacaggtcgttatggtgaagcat-tgg 28792627  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    ||  |||| || ||| ||| |||||| |  |||| ||||||||| | |||| |||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  28792628 ctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctacca 28792727  T
Q  414 ttatagtcct 423  Q
    || |||||||    
T  28792728 ttctagtcct 28792737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 31284225 - 31284420
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtca 118  Q
    ||||| |||||||| |||||||||| |||||||||||| |  || ||||||||||||| ||| ||| ||||||| |||||||| ||||||||||| | ||    
T  31284225 accggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgaca 31284324  T
Q  119 aggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    | ||||| ||||| |||||||||||||| ||| | ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  31284325 atgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcact 31284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 490 - 648
Target Start/End: Original strand, 25483462 - 25483619
Alignment:
Q  490 cctaaataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 589  Q
    |||||||||||||||||||||||||||| | | |   |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25483462 cctaaataatctactcttaaagcttaaacatggagcgattt-ctattaatggttttaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 25483560  T
Q  590 ataatatattctcaatacatggatgtgattttgattttagtgtatgttctaacttatct 648  Q
    || ||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  25483561 atgatatattctcaatgcatggatatgattttggttttagtgtatgttctaacttatct 25483619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 490 - 645
Target Start/End: Original strand, 26056325 - 26056479
Alignment:
Q  490 cctaaataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 589  Q
    |||||||||||||||||||||||||||| | | |   |||| |||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  26056325 cctaaataatctactcttaaagcttaaacatggagggattt-ctatcaatggttttaaaactagtgtaagttatttatatgtcaaaaaagttagaattgc 26056423  T
Q  590 ataatatattctcaatacatggatgtgattttgattttagtgtatgttctaactta 645  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  26056424 ataatatattatcaatacatggatgtgattttgattctagtgtatgttctaactta 26056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 490 - 645
Target Start/End: Original strand, 26076295 - 26076449
Alignment:
Q  490 cctaaataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 589  Q
    |||||||||||||||||||||||||||| | | |   |||| |||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  26076295 cctaaataatctactcttaaagcttaaacatggagggattt-ctatcaatggttttaaaactagtgtaagttatttatatgtcaaaaaagttagaattgc 26076393  T
Q  590 ataatatattctcaatacatggatgtgattttgattttagtgtatgttctaactta 645  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  26076394 ataatatattatcaatacatggatgtgattttgattctagtgtatgttctaactta 26076449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 16 - 421
Target Start/End: Original strand, 26823774 - 26824176
Alignment:
Q  16 tttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttg 115  Q
    |||||||| |||||||| ||||||||||  ||||||||||| |  || ||  ||||||||  ||| ||| ||||||| ||| ||||   || ||||||      
T  26823774 tttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactca 26823873  T
Q  116 tcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 215  Q
      || ||||| ||||| |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |      
T  26823874 ataatgccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgt 26823973  T
Q  216 ctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttact 315  Q
    |||||||  |||| |  || | || || || |||||||||| |||||| |||  | ||||||||   |||||  |||||||||||| |   ||||| |||    
T  26823974 ctacaaggaaaaggggcgcctcgttttgcctgttttctatggtgtggatcctggtgacatacga---catcagcgtgggagttatgctatacatctcact 26824070  T
Q  316 aagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcatt 415  Q
    |||||| || ||| ||||  ||||||| ||||||||||||||  ||||| ||||||||||| |||||| |  ||||||||| ||||||| |||| |||||    
T  26824071 aagcatgaaaagaggttcggaaataacaaggaaaacatggagaaattgcttcaatggaagaaggctctgaaacaagctgctgacttgtctggctttcatt 26824170  T
Q  416 atagtc 421  Q
     |||||    
T  26824171 ttagtc 26824176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 25 - 228
Target Start/End: Complemental strand, 27706646 - 27706443
Alignment:
Q  25 aatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggcca 124  Q
    |||||||| |||||| ||  |||||||||||| |  || ||||||||  || |||| ||| ||||| | |||||||| |||||||||||| |||||||||    
T  27706646 aatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggcca 27706547  T
Q  125 tcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagac 224  Q
    | ||||| |||||||||||||||||  | ||||||  || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27706546 ttgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagac 27706447  T
Q  225 aaag 228  Q
    ||||    
T  27706446 aaag 27706443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 27427748 - 27427605
Alignment:
Q  127 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaa 226  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |    
T  27427748 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaacca 27427649  T
Q  227 agagttgcttagtatttcccgttttctatgatgtggaacctact 270  Q
    || ||||| | || || || ||||||| || |||||||||||||    
T  27427648 agggttgcctcgttttgcctgttttctttggtgtggaacctact 27427605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 490 - 645
Target Start/End: Original strand, 25511345 - 25511495
Alignment:
Q  490 cctaaataatctactcttaaagcttaaataggaacatattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgc 589  Q
    |||||||||||||||||||||||||||| | | |   |||| ||||||||| || |||||||||||||||||||    |||| |||||| ||||||||||    
T  25511345 cctaaataatctactcttaaagcttaaacatggagcgattt-ctattaatggttttaaaacaagtgtaagttat----atgtaaaaaaatttagaattgc 25511439  T
Q  590 ataatatattctcaatacatggatgtgattttgattttagtgtatgttctaactta 645  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  25511440 ataatatattatcaatacatggatgtgattttgattctagtgtatgttctaactta 25511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 26861549 - 26861750
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||||||||||||||| |||||||||| ||||||||||||||  || ||||| ||||||  ||| ||| ||||||| |||||||| | |  ||||||     
T  26861549 ttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactc 26861648  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    | ||| ||||| ||||| ||||| ||||| |||||  | ||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||||| |||    
T  26861649 gacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaact 26861748  T
Q  215 gc 216  Q
    ||    
T  26861749 gc 26861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 28149920 - 28150094
Alignment:
Q  64 ttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgcca 163  Q
    |||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||||||| ||||| || |||||||| ||||| || || |||  ||    
T  28149920 ttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatcttctctatca 28150018  T
Q  164 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagt 239  Q
    ||||| | ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||||    
T  28150019 actatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagt 28150094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 222
Target Start/End: Original strand, 28181047 - 28181254
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| || |||||| |||  ||||||  |||||||||||| || || ||||| ||||| |  || ||| || |||| || ||||| ||| ||||||||    
T  28181047 ttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcactt 28181146  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| ||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  28181147 ttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcact 28181246  T
Q  215 gctacaag 222  Q
    ||| ||||    
T  28181247 gcttcaag 28181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 28234497 - 28234692
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||  ||||||||||  ||||||  | |||||||||| |  || ||||||||||| |  || ||| || ||||||||||||| ||||||||||||    
T  28234497 ttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcactt 28234596  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 210  Q
     |||||||||| ||||| ||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  28234597 ttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 49 - 267
Target Start/End: Original strand, 28242771 - 28242989
Alignment:
Q  49 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattc 148  Q
    ||||||||||| || ||||||||||| |  || |||  | |||| ||  |||| |||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  28242771 aagggaattcgcaccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattc 28242870  T
Q  149 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgt 248  Q
    |  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||  |  || |||| || ||  |    
T  28242871 ctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaat 28242970  T
Q  249 tttctatgatgtggaacct 267  Q
    |||||||||||||||||||    
T  28242971 tttctatgatgtggaacct 28242989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 15 - 222
Target Start/End: Original strand, 28185299 - 28185506
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| || |||||| |||  ||||||  |||||||||||| || || ||||| ||||| |  || ||| || |||| || ||||| ||| ||||||||    
T  28185299 ttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcactt 28185398  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| ||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| |||||||||||||||||||||||| |||    
T  28185399 ttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaact 28185498  T
Q  215 gctacaag 222  Q
    ||| ||||    
T  28185499 gcttcaag 28185506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 401
Target Start/End: Original strand, 26848600 - 26848976
Alignment:
Q  22 ggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaagg 121  Q
    |||||||||||||| ||||||  |||||| ||||| || || ||||||||||| || |||||| | || || ||||| || ||||| || ||  |||||     
T  26848600 ggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgctcctcaaga 26848699  T
Q  122 ccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaa 221  Q
     ||| ||||| || |||||||  ||||   |||| ||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||    
T  26848700 acattgaagactcgaggatttccattcttgtattctctgagaactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaa 26848799  T
Q  222 gacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatcttactaagca 320  Q
    |  |||| || || | ||  |||| ||||||||||   | |||||| ||||  | |||   ||||| | | | |||||||||| |||| ||| |||||||    
T  26848800 ggaaaagggtagcatggttattcctgttttctatggcatagaaccttctcatgtgcga---catcagaatagtagttatggtgaagca-cttgctaagca 26848895  T
Q  321 tcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    | |||||  ||| ||||||||| |||||| ||||||||| |||||| |||||||||  ||||||| ||| |||||||||||    
T  26848896 tgaagaggtgtttcaaaataacaaggaaagcatggagcgtttgcgtaaatggaagaaagctcttaaccatgctgctaactt 26848976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 28226917 - 28227090
Alignment:
Q  49 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattc 148  Q
    ||||||||||  || ||| |||||||||  || ||| || |||| |||||||| ||| |||||||| |||||| ||| ||||||||||||||||| ||||    
T  28226917 aagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattc 28227016  T
Q  149 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 222  Q
    |  | || |||  ||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  28227017 ctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaag 28227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 28297933 - 28297760
Alignment:
Q  49 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattc 148  Q
    ||||||||||| || ||||||||||| |  || ||| || |||| || ||||| |||||||||||| |||||  ||| |||||  |||||||||| ||||    
T  28297933 aagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattc 28297834  T
Q  149 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 222  Q
    |  | || ||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28297833 ctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 28514140 - 28514313
Alignment:
Q  49 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattc 148  Q
    ||||||||||| || ||||||||||| |  || ||| || |||| || ||||| |||||||||||| |||||  ||| |||||  |||||||||| ||||    
T  28514140 aagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattc 28514239  T
Q  149 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 222  Q
    |  | || ||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28514240 ctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 163 - 423
Target Start/End: Original strand, 27214498 - 27214758
Alignment:
Q  163 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtgg 262  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||| |||| ||||  |||  || || | ||  | || ||||||||||  || |    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttg 27214597  T
Q  263 aacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgatt 362  Q
    ||||| ||||| | ||| |||   | |     |||||||||||    ||| |||||||| |||||| ||| ||||||||| |||||||||||||||| ||    
T  27214598 aaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggtt 27214697  T
Q  363 gcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcct 423  Q
    ||   |||||||||| ||||||| ||||||||||||||| || ||||||||||||||||||    
T  27214698 gcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcattatagtcct 27214758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 163 - 423
Target Start/End: Complemental strand, 27234730 - 27234470
Alignment:
Q  163 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtgg 262  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||| |||| ||||  |||  || || | ||  | || ||||||||||  || |    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttg 27234631  T
Q  263 aacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgatt 362  Q
    ||||| ||||| | ||| |||   | |     |||||||||||    ||| |||||||| |||||| ||| ||||||||| |||||||||||||||| ||    
T  27234630 aaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggtt 27234531  T
Q  363 gcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcct 423  Q
    ||   |||||||||| ||||||| ||||||||||||||| || ||||||||||||||||||    
T  27234530 gcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcattatagtcct 27234470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 53 - 217
Target Start/End: Original strand, 28325452 - 28325616
Alignment:
Q  53 gaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccat 152  Q
    |||||||||| ||||||||||| || || ||| || |||| || ||||| ||||| |||||| |||||||||| ||||| ||||||||||| ||||| ||    
T  28325452 gaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctat 28325551  T
Q  153 attttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
     || |||  ||| ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  28325552 tttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 26342105 - 26341974
Alignment:
Q  98 aaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 197  Q
    |||| |||| |||||||||||| ||||| ||||| || |||||||| ||||| || || ||   ||||||||| |||||||| |||||||||||||||||    
T  26342105 aaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaact 26342006  T
Q  198 tgtccacatcattcactgctacaagacaaaga 229  Q
    ||||||||||||||| |||| |||| ||||||    
T  26342005 tgtccacatcattcattgcttcaaggcaaaga 26341974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 61 - 284
Target Start/End: Original strand, 28139520 - 28139743
Alignment:
Q  61 actttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctg 160  Q
    ||||| ||||||||||  || ||| || |||| || |||||  |||| ||||| || || ||||| ||||||||||||||||| || ||  | |||||      
T  28139520 acttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttcca 28139619  T
Q  161 ccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgt 260  Q
     ||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||| ||| |||||| | || || || || || |||||||||| |||    
T  28139620 tcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgt 28139719  T
Q  261 ggaacctactcacatacgaaatca 284  Q
    ||| ||| ||||||| ||| ||||    
T  28139720 ggatccttctcacattcgacatca 28139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 52 - 227
Target Start/End: Original strand, 26937064 - 26937239
Alignment:
Q  52 ggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattccca 151  Q
    |||||||| || ||||||||||| || || ||  |  ||||||| ||||| |||||||||||||||||||| || ||||| ||  |||||   || ||      
T  26937064 ggaattcgcaccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctg 26937163  T
Q  152 tattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaa 227  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  26937164 tattctctatcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaa 26937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 103 - 342
Target Start/End: Complemental strand, 28098535 - 28098299
Alignment:
Q  103 acaccatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 202  Q
    |||| ||| |||||||||||||||||||| || |||||||| |||||  | || |||   |||||||| |||||||  ||||||||||| ||||||||||    
T  28098535 acacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtcc 28098436  T
Q  203 acatcattcactgctac-aagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatg 301  Q
    ||||||||||| | ||| |||| |||| ||||||| || |||||  |||| | ||| ||||||||| ||||| | |||   ||||| |  ||||||||||    
T  28098435 acatcattcaccgttacgaaga-aaagggttgcttcgtttttcctattttttgtgacgtggaaccttctcacgtgcga---catcagacggggagttatg 28098340  T
Q  302 gtg-agcatcttactaagcatcaagagaagttccaaaataac 342  Q
    ||| ||||| |  |||||||| |||||| |||||||||||||    
T  28098339 gtgaagcat-tagctaagcatgaagagaggttccaaaataac 28098299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 25507112 - 25506978
Alignment:
Q  66 cattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaac 165  Q
    ||||||||||  ||||||  |||||||||||||||| ||||||||| | ||||  ||||| |||||||||||||||||||||||  |  |||||  ||||    
T  25507112 cattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaac 25507013  T
Q  166 tatgcatcttcttcattttgtttggacgaacttgt 200  Q
    ||||| |||||   |||||||||||| ||||||||    
T  25507012 tatgcctcttcaaaattttgtttggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 648
Target Start/End: Original strand, 26646894 - 26647039
Alignment:
Q  504 tcttaaagcttaaataggaa---catattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattc 600  Q
    ||||||||||||||||||||   |||||||| ||||||||||| |||| ||||| ||| ||||||||||||||||| |||||||| || |||||||||||    
T  26646894 tcttaaagcttaaataggaaacacatatttt-tattaatgtttttaaa-caagtataaattatttatatgtcaaaagagttagaactgtataatatattc 26646991  T
Q  601 tcaatacatggatgtgattttgattttagtgtatgttctaacttatct 648  Q
    ||  |||||  ||||  || |||| || ||| |||| |||||||||||    
T  26646992 tcggtacatcaatgtatttgtgatgttggtgcatgtactaacttatct 26647039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 648
Target Start/End: Original strand, 26752862 - 26753007
Alignment:
Q  504 tcttaaagcttaaataggaa---catattttctattaatgtttctaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattc 600  Q
    ||||||||||||||||||||   |||||||| ||||||||||| |||| ||||| ||| ||||||||||||||||| |||||||| || |||||||||||    
T  26752862 tcttaaagcttaaataggaaacacatatttt-tattaatgtttttaaa-caagtataaattatttatatgtcaaaagagttagaactgtataatatattc 26752959  T
Q  601 tcaatacatggatgtgattttgattttagtgtatgttctaacttatct 648  Q
    ||  |||||  ||||  || |||| || ||| |||| |||||||||||    
T  26752960 tcggtacatcaatgtatttgtgatgttggtgcatgtactaacttatct 26753007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 29825960 - 29826145
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| || ||||| | |||||||  |||||| || ||||||||||| || || ||| ||||||| || ||||| ||||| ||||||    
T  29825960 ttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcactt 29826059  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgt 200  Q
    || ||||| ||  |||||||||||||    ||||| || || ||| |||| ||||| |||||||| ||||| || || ||||||||    
T  29826060 gtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaacttgt 29826145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 2184369 - 2184417
Alignment:
Q  163 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 211  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2184369 aactatgcttcttcttcattttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 26975134 - 26975182
Alignment:
Q  164 actatgcatcttcttcattttgtttggacgaacttgtccacatcattca 212  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcattca 26975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 25071741 - 25071808
Alignment:
Q  164 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagt 231  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||  |||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagt 25071808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 27677508 - 27677438
Alignment:
Q  378 ggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||| | ||| |||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||    
T  27677508 ggctctgagccaggctgctaacttgtccggctaccatgatagtcctcctgggtacccaactttacttaaat 27677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 27706296 - 27706226
Alignment:
Q  378 ggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||| | ||| |||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||    
T  27706296 ggctctgagccaggctgctaacttgtccggctaccatgatagtcctcctgggtacccaactttacttaaat 27706226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 25506961 - 25506852
Alignment:
Q  295 agttatggtgagcatcttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctg 394  Q
    |||||||||||  |||| ||||||||| |||||||||| ||||||||  || ||||||||||| ||| || ||||||||| || ||||| || ||| |||    
T  25506961 agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg 25506862  T
Q  395 ctaacttgtc 404  Q
    ||||| ||||    
T  25506861 ctaacctgtc 25506852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 26617867 - 26617952
Alignment:
Q  330 gttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcatt 415  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||| ||||||| |||||||  |||||| || ||||||||||    
T  26617867 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 26617952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 26723795 - 26723880
Alignment:
Q  330 gttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcatt 415  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||| ||||||| |||||||  |||||| || ||||||||||    
T  26723795 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 26723880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 2184980 - 2185044
Alignment:
Q  164 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 228  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||  |||| |||| |||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag 2185044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 448
Target Start/End: Original strand, 26802726 - 26802805
Alignment:
Q  369 atggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    ||||||  ||||||| | ||| |||||||||||||||||||| ||| ||||||||| | ||||||| |||||||||||||    
T  26802726 atggaaagtggctctgagccaggctgctaacttgtccggctaccatgatagtcctcctcggtacccaactttacttaaat 26802805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 26949598 - 26949793
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtca 118  Q
    ||||||||||||||||| |||||   |||||||||||| || || |||||||||||||| || ||| | | ||| || ||||| ||||| |||||  |||    
T  26949598 accggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttcactcctca 26949697  T
Q  119 aggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    ||   || |||||||| || |||   |||  | | ||||||    | ||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  26949698 agagaattgaagaatcgagaattgccattatcgtcttttctaaggaatatgcttcttcttcattttgtttagacgaacttgtccatatcattcact 26949793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 401
Target Start/End: Original strand, 26959395 - 26959482
Alignment:
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    |||||||| ||||| |||| ||||||| | |||||||||||||||| ||||   |||||||||  ||||||| |||||||||||||||    
T  26959395 ctaagcatgaagagcagtttcaaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaactt 26959482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 621
Target Start/End: Complemental strand, 27337778 - 27337728
Alignment:
Q  571 tcaaaaaagttagaattgcataatatattctcaatacatggatgtgatttt 621  Q
    |||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  27337778 tcaaaacagttagaattgtataatatattgtcaatacatggatgtgatttt 27337728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 621
Target Start/End: Complemental strand, 27398518 - 27398468
Alignment:
Q  571 tcaaaaaagttagaattgcataatatattctcaatacatggatgtgatttt 621  Q
    |||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  27398518 tcaaaacagttagaattgtataatatattgtcaatacatggatgtgatttt 27398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 27427335 - 27427263
Alignment:
Q  547 aaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgatt 619  Q
    |||||| ||| ||||||||||||||||||| ||||| || || |||||||||| | | |||||||||||||||    
T  27427335 aaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatatattatgagtacatggatgtgatt 27427263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 624
Target Start/End: Complemental strand, 27604427 - 27604348
Alignment:
Q  547 aaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctca--atacatggatgtgattttgat 624  Q
    |||||||| | ||||||||||||||||||| |||||||| || |||||||||||| |   ||||||||||||||| ||||    
T  27604427 aaacaagtattagttatttatatgtcaaaatagttagaaatgtataatatattctgagtgtacatggatgtgattatgat 27604348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 558 - 624
Target Start/End: Complemental strand, 27592731 - 27592665
Alignment:
Q  558 agttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    ||||||||||||||| ||| |||||||| || |||||| ||||| | ||||||||||||||| ||||    
T  27592731 agttatttatatgtcgaaatagttagaaatgtataatacattcttagtacatggatgtgattgtgat 27592665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 27665223 - 27665169
Alignment:
Q  163 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||| ||||    
T  27665223 aactatgctacttcttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 558 - 624
Target Start/End: Original strand, 27679422 - 27679488
Alignment:
Q  558 agttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    ||||||||||||||| ||| |||||||| || |||||| ||||| | ||||||||||||||| ||||    
T  27679422 agttatttatatgtcgaaatagttagaaatgtataatacattcttagtacatggatgtgattgtgat 27679488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 27698388 - 27698318
Alignment:
Q  378 ggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||| | ||| |||||||||||||||||||| ||| |||||||||   ||||||| |||||||||||||    
T  27698388 ggctctgagccaggctgctaacttgtccggctaccatgatagtcctcccaggtacccaactttacttaaat 27698318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 624
Target Start/End: Original strand, 26802904 - 26802981
Alignment:
Q  547 aaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    |||||||| | ||||||||||||||  ||| |||||||| || |||||||||| | | ||||||||||||||| ||||    
T  26802904 aaacaagtattagttatttatatgttgaaatagttagaaatgtataatatattatgagtacatggatgtgattgtgat 26802981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 26811754 - 26811839
Alignment:
Q  330 gttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcatt 415  Q
    ||||||||||||| ||||||||||||| || ||||   |||||||||| ||||||| ||||| || |||||| || |||| |||||    
T  26811754 gttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctcttaaccaagttggtaacttatctggctttcatt 26811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 648
Target Start/End: Original strand, 27214911 - 27215012
Alignment:
Q  547 aaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgattttagtgtatgttctaacttat 646  Q
    |||||||| |||||  ||||||||| ||||  |||||||||  |||||| | ||||| ||||||||| |||| ||||| || |||||||  |||||||||    
T  27214911 aaacaagtataagtgttttatatgtgaaaagggttagaattatataatacaatctcagtacatggatctgatattgatgttggtgtatgcactaacttat 27215010  T
Q  647 ct 648  Q
    ||    
T  27215011 ct 27215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 619
Target Start/End: Complemental strand, 27706114 - 27706053
Alignment:
Q  558 agttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgatt 619  Q
    ||||||||||||||| ||| |||||||| || |||||| ||||| | |||||||||||||||    
T  27706114 agttatttatatgtcgaaatagttagaaatgaataatacattcttagtacatggatgtgatt 27706053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 28098261 - 28098221
Alignment:
Q  368 aatggaagatggctcttacccaagctgctaacttgtccggc 408  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  28098261 aatggaagatggctcttaaccaagcagctaacttgtccggc 28098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 28234804 - 28234864
Alignment:
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttac 386  Q
    ||||||||||||||||| |||| ||||||||| | ||||   |||||||||||||||||||    
T  28234804 agaagttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctcttac 28234864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 624
Target Start/End: Original strand, 28781575 - 28781639
Alignment:
Q  560 ttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    |||||| |||||||||| |||||||| || ||| |||||||| | ||||||||||||||| ||||    
T  28781575 ttatttttatgtcaaaatagttagaaatgtatactatattctgagtacatggatgtgattgtgat 28781639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 624
Target Start/End: Original strand, 28786712 - 28786776
Alignment:
Q  560 ttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    |||||| |||||||||| |||||||| || ||| |||||||| | ||||||||||||||| ||||    
T  28786712 ttatttttatgtcaaaatagttagaaatgtatactatattctgagtacatggatgtgattgtgat 28786776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 624
Target Start/End: Original strand, 28792833 - 28792897
Alignment:
Q  560 ttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    |||||| |||||||||| |||||||| || ||| |||||||| | ||||||||||||||| ||||    
T  28792833 ttatttttatgtcaaaatagttagaaatgtatactatattctgagtacatggatgtgattgtgat 28792897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Original strand, 25511268 - 25511303
Alignment:
Q  413 attatagtcctcatgggtaccccactttacttaaat 448  Q
    |||||||||||||||||||||| |||||||||||||    
T  25511268 attatagtcctcatgggtaccctactttacttaaat 25511303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 26635774 - 26635825
Alignment:
Q  166 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||| ||||    
T  26635774 tatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgct 26635825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 401
Target Start/End: Original strand, 26635919 - 26636006
Alignment:
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    |||||||| ||||  |||| ||||||| | |||||||||||||| | ||||   |||||||||  ||||||| |||||||||||||||    
T  26635919 ctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaactt 26636006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 26741740 - 26741791
Alignment:
Q  166 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||| ||||    
T  26741740 tatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgct 26741791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 401
Target Start/End: Original strand, 26741885 - 26741972
Alignment:
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    |||||||| ||||  |||| ||||||| | |||||||||||||| | ||||   |||||||||  ||||||| |||||||||||||||    
T  26741885 ctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaactt 26741972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 401
Target Start/End: Original strand, 26975277 - 26975368
Alignment:
Q  310 cttactaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    ||| |||||||| |||||  ||| ||||||||  | |||||| ||||||| |||| | |||||||||  ||||||| |||||||||||||||    
T  26975277 cttgctaagcatgaagaggggtttcaaaataaaaatgaaaacttggagcggttgcttaaatggaagaaagctcttaaccaagctgctaactt 26975368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 27427853 - 27427806
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttc 66  Q
    ||||| |||||||  ||||||||||||||||||||||||||||| |||    
T  27427853 accggcaatctcttgaaggctcttattgacaagggaattcgtaccttc 27427806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 26959250 - 26959296
Alignment:
Q  166 tatgcatcttcttcattttgtttggacgaacttgtccacatcattca 212  Q
    ||||| |||||||| |||| |||||| ||||||||||||||||||||    
T  26959250 tatgcttcttcttcgttttatttggatgaacttgtccacatcattca 26959296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 624
Target Start/End: Complemental strand, 27698296 - 27698230
Alignment:
Q  558 agttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    ||||||||||||||| ||| |||||||| |  |||||||||||| | ||||| ||||||||| ||||    
T  27698296 agttatttatatgtcgaaatagttagaaatttataatatattctgagtacatagatgtgattgtgat 27698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 439
Target Start/End: Original strand, 28185607 - 28185720
Alignment:
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcctca 425  Q
    ||||||||||||||||| |||| | ||||||| | ||||   |||||||||  |||||||| ||| |||||||||| || ||| | ||||  | ||||      
T  28185607 agaagttccaaaataacaaggatagcatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctgc 28185706  T
Q  426 tgggtaccccactt 439  Q
    ||||||||||||||    
T  28185707 tgggtaccccactt 28185720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 28297661 - 28297584
Alignment:
Q  324 agagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    ||||||||||||||||||| || | ||||||||| | ||||   |||||||||  |||||||| ||| ||||||||||    
T  28297661 agagaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaactt 28297584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 401
Target Start/End: Original strand, 28514412 - 28514489
Alignment:
Q  324 agagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaactt 401  Q
    ||||||||||||||||||| || | ||||||||| | ||||   |||||||||  |||||||| ||| ||||||||||    
T  28514412 agagaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaactt 28514489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 2e-88; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 26 - 421
Target Start/End: Complemental strand, 268587 - 268195
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||| |||||||||| |||||||||||| |  || ||||||||||||  ||| ||| ||||||| |||||||| | ||||||||| | ||| |||||    
T  268587 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccat 268488  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
     ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  268487 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaaa 268388  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||| || |  |  | || ||||| |||||||  ||||| |||||||||||||||   ||||||||||||||||||||||| ||||| ||||||||  |||    
T  268387 aagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacga---catcaaagtgggagttatggtgaacatctcactaagcacgaag 268291  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtc 421  Q
    |||  |||||||||| | || ||||||||||||| |||| |||||||||| ||||||| ||||||||| |||||||||| ||||| |||| |||||    
T  268290 agagtttccaaaatagcaagaaaaacatggagcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattctagtc 268195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 26 - 422
Target Start/End: Complemental strand, 28127910 - 28127516
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaatt-acaccatcacttgtcaaggcca 124  Q
    ||||||| ||||| |||  |||||||||||| |  || ||||||||||||  | ||||||| ||||||||  ||| | ||||| |||||| | |||||||    
T  28127910 atctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggcca 28127811  T
Q  125 tcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagac 224  Q
    | ||||||||||| |||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28127810 ttgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagac 28127711  T
Q  225 aaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaa 324  Q
    |||| || || |||| || || ||||||| ||  ||||| |||||| |  | ||| |||||   |  ||||||||||||||  | ||| ||||||||  |    
T  28127710 aaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcat---acagggagttatggtgaagagcttgctaagcatgga 28127614  T
Q  325 gagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcc 422  Q
    |||| ||||||||||||| || ||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  28127613 gagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccattatagtcc 28127516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 26 - 422
Target Start/End: Complemental strand, 28164592 - 28164200
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||||||||| |||   |||||||||||||  || ||||||||||||  ||||||||| |||||||| ||||| ||||| ||| |  ||||||||||    
T  28164592 atctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccat 28164493  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
     ||| ||||| | |||||||||||  | || |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28164492 tgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 28164393  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||| || || |||| || || ||||||| ||  ||||| |||||| |  | |||   ||||| |  |||||||||||  |  ||||||||||||||   |    
T  28164392 aagggtcgcctagttttgcctgttttct-tggcgtggatcctactgatgtgcga---catcatacagggagttatggcaaagatcttactaagcatggtg 28164297  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcc 422  Q
    ||| ||||||||||||| || ||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  28164296 agaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccattatagtcc 28164200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 6e-79; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 37 - 446
Target Start/End: Complemental strand, 18731723 - 18731320
Alignment:
Q  37 gctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatcta 136  Q
    ||||||| |||||||||||| |  || |||||||||||   ||| ||  ||||||| |||||||| | ||||||||| | ||| ||||| ||||| ||||    
T  18731723 gctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtcta 18731624  T
Q  137 ggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgctt 236  Q
    |||| || |||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  |    
T  18731623 ggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtct 18731524  T
Q  237 agtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaagagaagttccaa 336  Q
     || || || ||||||||||  ||||| |||| ||||||||||   ||||||||||||||||||||||| ||||| ||||||||  || |||  ||||||    
T  18731523 tgttttgcctgttttctatggcgtggatcctagtcacatacga---catcaaagtgggagttatggtgaacatctcactaagcacaaaaagagtttccaa 18731427  T
Q  337 aataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtacccca 436  Q
    |||||| || ||||||||||||| |||| |||||||||| ||||||| ||| |||||||||||||||||||||| |||| |||   |||||||||| ||     
T  18731426 aataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattttag---tcatgggtactcct 18731330  T
Q  437 ctttacttaa 446  Q
    ||||||||||    
T  18731329 ctttacttaa 18731320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 26 - 423
Target Start/End: Complemental strand, 18655707 - 18655313
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||| || ||||||| |||||||||||| |  || |||||||||||   ||| ||  |||| || |||||||| | ||||||||| | ||| |||||    
T  18655707 atctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccat 18655608  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
      |||| |||||||| ||||||||  | ||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18655607 tcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagaca 18655508  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||| || |  | || ||||| ||||||||||  ||||| |||||||||||||||   ||||||| ||| ||||||||||| ||||| ||||||||   |     
T  18655507 aagggtcgtctcgtttttcctgttttctatggcgtggatcctactcacatacga---catcaaactggaagttatggtgaacatctcactaagcacagaa 18655411  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcct 423  Q
    |||| |||||||||||| || ||||||||||||| |||| |||||||||| ||||||| ||| |||||||||||||||||||||| |||| |||||||    
T  18655410 agaatttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattctagtcct 18655313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 15 - 446
Target Start/End: Complemental strand, 18724326 - 18723901
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| ||| ||||||| |||||||||| |||||||||||| |  || |||||||||||   ||| ||  ||||||| |||||||| | |||||||||     
T  18724326 ttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactc 18724227  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    | ||| ||||| ||||| |||||||| || |||||  | ||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  18724226 gacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcact 18724127  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttac 314  Q
    |||||||||||||| || |  | || || || ||||||||||  ||||| |||| ||||||||||   || |||||||||||||||||||| ||||| ||    
T  18724126 gctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacga---caccaaagtgggagttatggtgaacatctcac 18724030  T
Q  315 taagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcat 414  Q
    ||||||  ||  ||  |||||||||||| || ||||||||||||| |||| |||||||||| ||||||| ||| |||||||||||||||||||||| |||    
T  18724029 taagcacaaaatgagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccat 18723930  T
Q  415 tatagtcctcatgggtaccccactttacttaa 446  Q
    | ||||||   ||||||| || ||||||||||    
T  18723929 tttagtcc---tgggtactcctctttacttaa 18723901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 15 - 446
Target Start/End: Complemental strand, 18679808 - 18679383
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| ||| ||||||| |||||||||| |||||| ||||| |  || |||||||||||   ||| ||  ||||||| |||||||| | |||||||||     
T  18679808 ttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactc 18679709  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
    | ||| ||||| ||||| |||||||| || |||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18679708 gacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcact 18679609  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttac 314  Q
    |||||||||||||| || |  | || || || ||||||||||  ||||| |||||||||||| ||   ||||||||||| ||||||||||| ||||| ||    
T  18679608 gctacaagacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcacatatga---catcaaagtggtagttatggtgaacatctcac 18679512  T
Q  315 taagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcat 414  Q
    ||| ||   | |||  |||||||||||| |  ||||||||||||| |||| |||||||||| | ||||| ||| |||||||||||||||||||||| |||    
T  18679511 taatcactgaaagagtttccaaaataacaataaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccat 18679412  T
Q  415 tatagtcctcatgggtaccccactttacttaa 446  Q
    | ||||||   ||||||| || ||||||||||    
T  18679411 tttagtcc---tgggtactcctctttacttaa 18679383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 26 - 420
Target Start/End: Complemental strand, 18699630 - 18699239
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||| || ||||||| |||||||||||| |  || |||||||||||   ||| ||  |||| || |||||||| | ||||||||| | ||| |||||    
T  18699630 atctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccat 18699531  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
     ||||| |||||||| || |||||  | ||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18699530 tgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagaca 18699431  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||  || |  | || || || ||||||||||  || || |||||||||||||||   ||||||||||||||||||||||| ||||| ||||||||   |     
T  18699430 aaaggtcgtctcgttttgcctgttttctatggcgtagatcctactcacatacga---catcaaagtgggagttatggtgaacatctcactaagcacggaa 18699334  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagt 420  Q
    |||  |||||||||||| || ||||||||||||| |||| |||||||||| | ||||| ||| |||||||||||||||||||||| |||| ||||    
T  18699333 agagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattttagt 18699239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 18073807 - 18073950
Alignment:
Q  127 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaa 226  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |    
T  18073807 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaacca 18073906  T
Q  227 agagttgcttagtatttcccgttttctatgatgtggaacctact 270  Q
    || ||||| | || || || ||||||| || |||||||||||||    
T  18073907 agggttgcctcgttttgcctgttttctttggtgtggaacctact 18073950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 17989182 - 17989088
Alignment:
Q  127 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaa 221  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  17989182 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaa 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 5091208 - 5090951
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| || ||||||||| | |||||   || |||||||||||  || ||||||||||| |  || ||| |  |||||||  |||| ||||| ||||||    
T  5091208 ttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttcagcgaggagaccaaataacaccgtcactt 5091109  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||  ||||||||| |||| | |||  | | || |||  | ||||||| |||||||| |||||||| || ||||||||||| || |||||||    
T  5091108 ctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttcgttttgtttagatgaacttgtccatattattcact 5091009  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactca 272  Q
    ||| ||||  |||  ||||| | || || ||  ||||||||| |||||||||| ||||    
T  5091008 gctccaaggaaaatggttgcctggttttgcctattttctatggtgtggaaccttctca 5090951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 18074220 - 18074292
Alignment:
Q  547 aaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgatt 619  Q
    |||||| ||| ||||||||||||||||||| ||||| || || |||||||||| | | |||||||||||||||    
T  18074220 aaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatatattatgagtacatggatgtgatt 18074292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 17989287 - 17989240
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttc 66  Q
    ||||| |||||||  ||||||||||||||||||||||||||||| |||    
T  17989287 accggcaatctcttgaaggctcttattgacaagggaattcgtaccttc 17989240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 18073702 - 18073745
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtac 62  Q
    ||||| |||||||  |||||||||||||||||||||||||||||    
T  18073702 accggcaatctcttgaaggctcttattgacaagggaattcgtac 18073745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 3e-74; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 26 - 421
Target Start/End: Complemental strand, 29274013 - 29273621
Alignment:
Q  26 atctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccat 125  Q
    ||||||| ||| |||||| |||||||||||| |  || ||||||||||||  ||| ||| ||||||| |||||||| | | ||||||| | ||| | |||    
T  29274013 atctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcat 29273914  T
Q  126 cgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 225  Q
     ||||| ||||| |||||||||||  | ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29273913 tgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 29273814  T
Q  226 aagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtgagcatcttactaagcatcaag 325  Q
    ||| || |  |  | || || || |||||||  ||||| |||||||||||||||   ||||||||||||||||||||||| ||||| |||||| |  |||    
T  29273813 aagggtcgtctcattttgcctgtcttctatggcgtggatcctactcacatacga---catcaaagtgggagttatggtgaacatctcactaagtacgaag 29273717  T
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtc 421  Q
    |||  |||||||||| | || |||||||||| || |||| |||||||||| ||||||| ||||||||| |||||||||| ||||| |||| |||||    
T  29273716 agagtttccaaaatagcaagaaaaacatggatcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattctagtc 29273621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 131; Significance: 1e-67; HSPs: 4)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 3676 - 3462
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  3676 ttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 3577  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaa-ctatgcatcttcttcattttgtttggacgaacttgtccacatcattcac 213  Q
     |||||||||| || ||||||||||||||||||||  | ||||||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3576 ctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcac 3477  T
Q  214 tgctacaagacaaag 228  Q
    |||||||||||||||    
T  3476 tgctacaagacaaag 3462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 14609 - 14397
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| |||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  14609 ttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 14510  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| | |||||| |||||||||||||||||||||||||| |||||||    
T  14509 ctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcact 14411  T
Q  215 gctacaagacaaag 228  Q
    ||||||||||||||    
T  14410 gctacaagacaaag 14397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 433
Target Start/End: Complemental strand, 3345 - 3259
Alignment:
Q  347 aaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtacc 433  Q
    ||||||||||| | ||||  | ||||||  ||||||| | ||| |||||||||||||||||||| ||| ||||||||| ||||||||    
T  3345 aaaacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccatgatagtcctcctgggtacc 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 14250 - 14195
Alignment:
Q  378 ggctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtacc 433  Q
    |||||| | ||| |||||||||||||||||||| ||| ||||||||| ||||||||    
T  14250 ggctctgagccaggctgctaacttgtccggctaccatgatagtcctcctgggtacc 14195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 117; Significance: 3e-59; HSPs: 3)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 15 - 421
Target Start/End: Complemental strand, 4925 - 4522
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||| ||     
T  4925 ttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctc 4826  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
      ||||||||| || ||||||||||||||||||||  | ||||||  |  |||||| | |||||| |||||||||||||||||||||||||| |||||||    
T  4825 cgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcact 4726  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    |||||||||||||| || || | || || || |||||||  |  |||||||||||| || | ||| ||| | |||  || |||||||||| ||||| |      
T  4725 gctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatc-tgaaa--ggtagttatggtgaagcat-tgg 4630  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    || ||||| || ||| ||| |||||| |  || | ||||||||| | |||| |||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  4629 ctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctacca 4530  T
Q  414 ttatagtc 421  Q
    || |||||    
T  4529 ttctagtc 4522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 421
Target Start/End: Complemental strand, 13886 - 13483
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  13886 ttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 13787  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  ||||   |||||| |||||||||||||| ||||| ||||| |    
T  13786 ctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcatt 13687  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    |||||||||||||  || || | || || || ||||||| || |||||| |||||| |  | |||   ||||| |  ||  ||||||||| ||||| |      
T  13686 gctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcga---catcatacaggtcgttatggtgaagcat-tgg 13591  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    ||   ||| || ||| ||| |||||| |  || | |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  13590 ctggacatgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctacca 13491  T
Q  414 ttatagtc 421  Q
    || |||||    
T  13490 ttctagtc 13483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 624
Target Start/End: Complemental strand, 13376 - 13319
Alignment:
Q  567 tatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    |||||||||| |||||||| || ||| |||||||| | ||||||||||||||| ||||    
T  13376 tatgtcaaaatagttagaaatgtatactatattctgagtacatggatgtgattgtgat 13319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 15 - 421
Target Start/End: Original strand, 7458 - 7861
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  7458 ttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 7557  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  ||||   |||||| |||||||||||||| ||||| ||||| |    
T  7558 ctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcatt 7657  T
Q  215 gctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcatcaaagtgggagttatggtg-agcatctta 313  Q
    ||||||||||| |  || || | || || || ||||||| || |||||| |||||| |  | |||   ||||| |  ||  ||||||||| ||||| |      
T  7658 gctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcga---catcatacaggtcgttatggtgaagcat-tgg 7753  T
Q  314 ctaagcatcaagagaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttacccaagctgctaacttgtccggctatca 413  Q
    ||   ||| || ||| ||| |||||| |  || | |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  7754 ctggacatgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctacca 7853  T
Q  414 ttatagtc 421  Q
    || |||||    
T  7854 ttctagtc 7861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 624
Target Start/End: Original strand, 7968 - 8025
Alignment:
Q  567 tatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgattttgat 624  Q
    |||||||||| |||||||| || ||| |||||||| | ||||||||||||||| ||||    
T  7968 tatgtcaaaatagttagaaatgtatactatattctgagtacatggatgtgattgtgat 8025  T

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Target: scaffold0003 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 59615 - 59758
Alignment:
Q  127 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaa 226  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |    
T  59615 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaacca 59714  T
Q  227 agagttgcttagtatttcccgttttctatgatgtggaacctact 270  Q
    || ||||| | || || || ||||||| || |||||||||||||    
T  59715 agggttgcctcgttttgcctgttttctttggtgtggaacctact 59758  T

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Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 60028 - 60100
Alignment:
Q  547 aaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctcaatacatggatgtgatt 619  Q
    |||||| ||| ||||||||||||||||||| ||||| || || |||||||||| | | |||||||||||||||    
T  60028 aaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatatattatgagtacatggatgtgatt 60100  T

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Target: scaffold0003; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 59510 - 59553
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtac 62  Q
    ||||| |||||||  |||||||||||||||||||||||||||||    
T  59510 accggcaatctcttgaaggctcttattgacaagggaattcgtac 59553  T

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Target: scaffold1254 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 171 - 37
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    || ||||||||||| ||||||||| |||||||||||||||| |||||||||||     
T  171 ttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 72  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcc 149  Q
     ||||||||||||||||||||||||||||||||||    
T  71 ctcaaggccatcgaagaatctaggatttttattcc 37  T

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Target: scaffold0038 (Bit Score: 80; Significance: 3e-37; HSPs: 5)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 222
Target Start/End: Original strand, 34658 - 34865
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    ||||||||  ||||||||||  ||||||  | |||||||||| |  || ||||||||||| |  || ||| || ||||||||||||| ||||||||||||    
T  34658 ttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcactt 34757  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     |||||||||| ||||| ||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  34758 ttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcact 34857  T
Q  215 gctacaag 222  Q
    ||| ||||    
T  34858 gcttcaag 34865  T

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Target: scaffold0038; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 49 - 267
Target Start/End: Original strand, 42933 - 43151
Alignment:
Q  49 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattc 148  Q
    ||||||||||| || ||||||||||| |  || |||  | |||| ||  |||| |||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  42933 aagggaattcgcaccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattc 43032  T
Q  149 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgt 248  Q
    |  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||  |  || |||| || ||  |    
T  43033 ctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaat 43132  T
Q  249 tttctatgatgtggaacct 267  Q
    |||||||||||||||||||    
T  43133 tttctatgatgtggaacct 43151  T

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Target: scaffold0038; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 27415 - 27588
Alignment:
Q  49 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattc 148  Q
    ||||||||||  || ||| |||||||||  || ||| || |||| |||||||| ||| |||||||| |||||| ||| ||||||||||||||||| ||||    
T  27415 aagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattc 27514  T
Q  149 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 222  Q
    |  | || |||  ||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  27515 ctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaag 27588  T

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Target: scaffold0038; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 53 - 217
Target Start/End: Original strand, 116767 - 116931
Alignment:
Q  53 gaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccat 152  Q
    |||||||||| ||||||||||| || || ||| || |||| || ||||| ||||| |||||| |||||||||| ||||| ||||||||||| ||||| ||    
T  116767 gaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctat 116866  T
Q  153 attttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
     || |||  ||| ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  116867 tttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

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Target: scaffold0038; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 34966 - 35026
Alignment:
Q  326 agaagttccaaaataacgaggaaaacatggagcgattgcgtcaatggaagatggctcttac 386  Q
    ||||||||||||||||| |||| ||||||||| | ||||   |||||||||||||||||||    
T  34966 agaagttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctcttac 35026  T

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Target: scaffold0019 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 58536 - 58334
Alignment:
Q  15 ttttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcactt 114  Q
    |||||| || |||||||| |  ||||||  |||||||||||| || || ||||| ||||| |  || ||| || |||| || ||||| ||||||||||||    
T  58536 ttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcactt 58437  T
Q  115 gtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 214  Q
     ||||||||||  |||| ||||||||||| |||||| | || |||  ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  58436 ttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcact 58337  T
Q  215 gct 217  Q
    |||    
T  58336 gct 58334  T

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Target: chr2 (Bit Score: 66; Significance: 8e-29; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 3279670 - 3279823
Alignment:
Q  64 ttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgcca 163  Q
    |||||||||||||  || ||| |  |||| |||||||| |||| |||||||||||||||||||||||| || | ||||||||||||  | || |||  ||    
T  3279670 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 3279769  T
Q  164 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||    
T  3279770 actatgcttcttctatattttgtttggacgaacttgtccacatcattcattgct 3279823  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 17993934 - 17993736
Alignment:
Q  19 accggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcacttgtca 118  Q
    ||||||||||||||||| ||||||  ||||||||||||||| || ||||| ||||| || || ||| | ||||| |||||||| ||||| || ||  |||    
T  17993934 accggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctca 17993835  T
Q  119 aggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 217  Q
    ||  ||| ||||| || || |||   |||  | | || ||     ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  17993834 agagcattgaagactcaagaattgcgattatcgtcttctcaaaggactatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgct 17993736  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 3279986 - 3280026
Alignment:
Q  368 aatggaagatggctcttacccaagctgctaacttgtccggc 408  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  3279986 aatggaagatggctcttaaccaagcagctaacttgtccggc 3280026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 16688943 - 16689139
Alignment:
Q  14 attttaccggtaatctctataaggctcttattgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaattacaccatcact 113  Q
    ||||||| |||||||| || || |||||   |||||||||||| |||   ||||||||||| || || ||| | ||||| ||  |||| |||||||||||    
T  16688943 attttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcact 16689042  T
Q  114 tgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 210  Q
    | ||||||| || ||||| || ||||||   || ||| | ||||||   |||||||||| ||| || ||||||||||| ||||||||| ||||||||    
T  16689043 tatcaaggcaattgaagactcaaggattgcaatccccgtgttttctaagaactatgcattttcctcgttttgtttggatgaacttgtcaacatcatt 16689139  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 214513 - 214481
Alignment:
Q  90 aggagatgaaattacaccatcacttgtcaaggc 122  Q
    ||||||||||||||||||||||||| |||||||    
T  214513 aggagatgaaattacaccatcacttttcaaggc 214481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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