View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1317A-Insertion-24 (Length: 198)
Name: NF1317A-Insertion-24
Description: NF1317A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1317A-Insertion-24 |
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Alignment Details
Target: chr1 (Bit Score: 124; Significance: 3e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 3e-64
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 34016601 - 34016790
Alignment:
| Q |
8 |
caaaacaagttgacacggtacaatctcaaaaacttcaactaccaaamccatcttccctttcaccaatccaatttcactgttcttcccaacctcaacttta |
107 |
Q |
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||||||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||||||| ||| |
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| T |
34016601 |
caaaacaagttgacaaggcacaatctcaaaaacttcaactaccaaacccaccttccctttcaccaatccaattgcactattcttcccaacctcaacctta |
34016700 |
T |
|
| Q |
108 |
aaccccaaaacccctcccactaccttcactttttcctctacacattcaatctttgcacttgaagtaaacctcttctccctccatgtatta |
197 |
Q |
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||||||||||| ||||||||| ||||||| |||||| | || |||||| |||||||| |||||||||||||||||||||||||||||| |
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| T |
34016701 |
aaccccaaaactcctcccacttccttcaccttttcccccaccacttcaatgtttgcactagaagtaaacctcttctccctccatgtatta |
34016790 |
T |
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