View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1381_high_3 (Length: 398)
Name: NF1381_high_3
Description: NF1381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1381_high_3 |
 | |
|
| [»] chr3 (33 HSPs) |
| |
|
| [»] scaffold0648 (1 HSPs) |
| |
|
| [»] scaffold0274 (1 HSPs) |
| |
|
| [»] chr4 (3 HSPs) |
| |
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| [»] scaffold0640 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 366; Significance: 0; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 13 - 398
Target Start/End: Complemental strand, 19399959 - 19399574
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19399959 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
19399860 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19399859 |
aaatttcaccagagaaattattagagccaatagataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
19399760 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19399759 |
aagaccaagatattcaatatgtgctagttgacctatttcatcttgaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
19399660 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19399659 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtcaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
19399574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 348
Target Start/End: Complemental strand, 18147086 - 18146746
Alignment:
| Q |
8 |
tgagatgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaa |
107 |
Q |
| |
|
|||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
18147086 |
tgagttgaaaaggtggaacccaatccaaatcaaattggaatacaaaacttgaattactcatgtctagtgaatctaaactagagaggttggaaaaagttaa |
18146987 |
T |
|
| Q |
108 |
atttgaaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttc |
207 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18146986 |
ttttgaaattgcaccagagaaattattagagccaatccataagtaatttaaggatgagaggtttcctagagttgaaggaatgaaaccacttaacatgttc |
18146887 |
T |
|
| Q |
208 |
caagcaagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaatttt |
307 |
Q |
| |
|
|| | ||||||||| |||| ||||||||| ||||| |||||| ||| |||||||| ||| ||||||||||||| | ||||| ||||||| ||||||||| |
|
|
| T |
18146886 |
catgaaagatcaaggtattgaatatgtgcaagttggcctattccatttggaattgatccgtgtagtttgttattatagagattaaggtgtctcaaatttt |
18146787 |
T |
|
| Q |
308 |
gaagggttagcaagcttgaaggtatctcaccatatatattg |
348 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18146786 |
gaaggtttagcaagcttgaaggtatctcaccatatatattg |
18146746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 348
Target Start/End: Complemental strand, 19381144 - 19380809
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || | |
|
|
| T |
19381144 |
tgaaaaggaggaacccaatccaaatcaaattggaataaaaaatttgaattactcaagtctagcgaatctaaactagagagtttggaaaaagttaatttag |
19381045 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||||| | || |||||||||||||||||||||| ||| |
|
|
| T |
19381044 |
aaatttcaccagagaaattattagagccaatagataacaaatataaggatgagaggtttcctagagttaatggtatgaaaccacttaacatgttcctagc |
19380945 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
19380944 |
aagatccagatattcaatatgtgctagttggcctatttcatctggaattagtccctgtaatttgttactagaaagatcaaggagtttcaaattttgaagg |
19380845 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattg |
348 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
19380844 |
tttagcaagcttgaaggcatctcaccatatatattg |
19380809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 13 - 398
Target Start/End: Complemental strand, 19351644 - 19351260
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatt-t |
111 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| | |
|
|
| T |
19351644 |
tgaaaaggaggaacccaatccaaatcaaattggaatacaaaatttgaattactcaagtctagccattctaaactagagagtttggaaaaaa--aaattgt |
19351547 |
T |
|
| Q |
112 |
gaaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaag |
211 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19351546 |
gaaatttcaccagtgaaatgattagagccaatcgataaggaaattaaggatgagaggtttcctagagttgaaggaatgaaaccacttaacatgttccatg |
19351447 |
T |
|
| Q |
212 |
caagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaag |
311 |
Q |
| |
|
||||||||| |||| ||||| || |||||| | |||| |||||||||||| ||| ||||||| ||||| ||||||||||||| ||| |||||||| |
|
|
| T |
19351446 |
aaagatcaaggtattgaatatttggtagttggcttattccatctggaattgatccttgtagttggttatatttgagatcaaggtgtctcagtttttgaag |
19351347 |
T |
|
| Q |
312 |
ggttagcaagcttgaaggtatctcaccatatatattgttattgt-aaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
| |||| |||||||||||||||| |||||||||||| | |||| |||||| |||| | |||||||||||||||| |||||||||||| |
|
|
| T |
19351346 |
gtttagtaagcttgaaggtatcttaccatatatattact-ttgtgaaaggtgaagataagtgagatctttggtgagattaaaaaaccc |
19351260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 13 - 398
Target Start/End: Original strand, 14896139 - 14896524
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||| || |||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
14896139 |
tgaaaaggaggaacccaatccaaatcaaattggaatgcaacatttgaattactcatgtctagtgaaactaaactagagtgtttggaaaaagttaaatttg |
14896238 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||| || ||||||| |||||||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
14896239 |
aaatttcagcagagaaattattagagccaatggataaggaaattaaggatgagaggtttcctagagttgaaggaatgaaaccgcttaacatgttcattga |
14896338 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||||||| | || ||||| || |||||| |||||| ||||||||||| ||| ||||| ||||| | | ||||||||||||| | ||| |||||||| |
|
|
| T |
14896339 |
aagatcaaggtgttgaatatttggtagttgccctattctatctggaattgatccttgtaggttgtttttagagagatcaaggtgtcttaaaatttgaagg |
14896438 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| | | | |||||||||| ||||||||| ||| |||| |||||||||||| |
|
|
| T |
14896439 |
tttagcaagcttgaaggtatctcaccatgtatattgctttcatgaaggtaaagataggtgagattttttgtgagattaaaaaaccc |
14896524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 13 - 347
Target Start/End: Complemental strand, 18108690 - 18108356
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||| |
|
|
| T |
18108690 |
tgaaaaggaggaacccaatccaaatcaaactggaatacaaaatttgaattactcaagtctagtgaaaataaagtagagagattggaaaaatgtaaatttg |
18108591 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||||| | |
|
|
| T |
18108590 |
aaatttcgccagagaaattattagagccaataaataagtgctttaaggaagagaggtttcctacagttgaaggaatgagaccactaaacatgttcgcgga |
18108491 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
| |||||| |||| || || || |||||| ||| |||| ||||| ||| ||||||| ||||| ||||||||||||| |||||||||||||| |
|
|
| T |
18108490 |
tatatcaaggtattgaaaatttggtagttgggaaattctatctataattgatccttgtagttggttatttgagagatcaaggtgtctcaaattttgaagg |
18108391 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatatt |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
18108390 |
tttagcaagcttgaaggtatctcaccatatatatt |
18108356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 13 - 398
Target Start/End: Complemental strand, 17950083 - 17949694
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||| |||||||||| | | |||||||||| ||||||||| |
|
|
| T |
17950083 |
tgaaaaggaggaacccaatccaaatcaaattggattacaaaatttgaattactcaagtctagttcatctaaactaaataatttggaaaaatgtaaatttg |
17949984 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||| | |
|
|
| T |
17949983 |
aaattttaccagagaaattattagagccaatagataagtaatataaggatgagaggtttcctagagttgaaggaatgagaccaccaaacatgttcgcgga |
17949884 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtag----tttgttatcaacgagatcaaggtgtttcaaattttg |
308 |
Q |
| |
|
|| |||||| ||||||| || || |||||| || ||| |||| ||||| ||| ||||| |||||||| ||||||||||||| |||||||||| |
|
|
| T |
17949883 |
aatatcaaggtattcaaaatttggtagttggccaattctatctataattgatccttgtagttaatttgttatttgagagatcaaggtgtctcaaattttg |
17949784 |
T |
|
| Q |
309 |
aagggttagcaagcttgaaggtatctcaccatatatatt-gttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||| || ||||| |||| |||||| ||||||||||| ||| |||||||| |
|
|
| T |
17949783 |
aaggtttagcaagcttgaaggtatctcaccatatatattatttagtg-caaggtcaagagaggtgatatctttggtgagattgaaaaaccc |
17949694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 13 - 395
Target Start/End: Complemental strand, 18165407 - 18165025
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||| |
|
|
| T |
18165407 |
tgaaaaggaggaacccaatccaaagcaaattggaatacaaaatttgaattactcaagtctagtgaatctaaattggagagtttggcaaaatgtaaatttg |
18165308 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||| || ||||| ||||||||||||| | |
|
|
| T |
18165307 |
aaatttcaccagagaaattattagagccaatagataagtcatttaaggatgagaggtttcctagagtcgaagggataaaaccgcttaacatgttccctga |
18165208 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||||||| || ||||| | |||||| |||||| |||||||||||| ||| | || || | | | | | || ||||| || |||||||||||| |
|
|
| T |
18165207 |
aagatcaaggcctttaatatttattagttggcctattccatctggaattgatccttttaattgggttttagctagcaaaaggtattgcaaattttgaagt |
18165108 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaa |
395 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||||| |||| || ||| ||||||||||| ||||||||| |
|
|
| T |
18165107 |
tttagcaagcttgaaggtatctcaccatttatattgttccctgaaaggctaagaaagttgatatctttggtgagattaaaaaa |
18165025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 6 - 398
Target Start/End: Complemental strand, 17942212 - 17941820
Alignment:
| Q |
6 |
agtgagatgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagt |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||| | |
|
|
| T |
17942212 |
agtgagttgaaaaggaggaacccaatccaaatcaaattggaatacaaaacttgaattactcaagtctagtgagtctaaactagagagtttgaaaaaagtt |
17942113 |
T |
|
| Q |
106 |
aaatttgaaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgt |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |||| ||||||| || ||||||||||||||||| | ||||| | || || || |
|
|
| T |
17942112 |
aaatttgaaatttcaccagagaaattattagaaccaataaataaccaatttaatgatgagaggtttcctagagtcgtgggaattgatccttgtagttcgt |
17942013 |
T |
|
| Q |
206 |
tccaagcaagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaatt |
305 |
Q |
| |
|
| || ||||| || |||| ||||| || |||||| |||||| ||| ||||||| |||| ||||||| ||||| | ||||| ||||||| ||||||| |
|
|
| T |
17942012 |
tttcagagagatcgaggtattgaatatttggtagttggcctattccatttggaattagtccttgtagttggttataagagagataaaggtgtctcaaatt |
17941913 |
T |
|
| Q |
306 |
ttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||| | | || ||||| |||| | |||||||||||||||| |||||||||||| |
|
|
| T |
17941912 |
ttgaaggtttagcaagcttgaaggtatctcaccatgtatattgctctcgtgaaggtcaagataagtgagatctttggtgagattaaaaaaccc |
17941820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 340
Target Start/End: Complemental strand, 25463301 - 25462974
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||| |
|
|
| T |
25463301 |
tgaaaaggaggaacccaatccaaatcaaattgtaatacaaaagttgaattactcaagtctagtgaatctaaactaaagagtttggagaaagttaattttg |
25463202 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||| | |||||||| ||||||||||| || ||||| || ||||||| ||||||||||||| |||| |||| || |||||| |||||||||| | |
|
|
| T |
25463201 |
aaattgccccagagaagttattagagccgatagataaggaagttaaggatgagaggtttcctatagttaaagggattaaaccaattaacatgttaatgga |
25463102 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||||||| |||| ||||| || |||||| |||||| ||||||||||||||||||||| || ||||| | |||||||||||| |||||||||||||| |
|
|
| T |
25463101 |
aagatcaaggtattgaatatttggtagttggcctattccatctggaattggtccctgtaattggttatgagatagatcaaggtgtctcaaattttgaagg |
25463002 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccat |
340 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
25463001 |
tttagcaagcttgaaggtatgtcaccat |
25462974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 13 - 347
Target Start/End: Complemental strand, 16677470 - 16677136
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||| |||||||||||||| |||||||| ||||||| || | || | | |||| ||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
16677470 |
tgaaatggaggaacccaatccaaatcaaattggaatacaacacttaatcttctcaggtctagtatatctaaactagagagtttggaaaaagttaaatttg |
16677371 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||| |||||||||||||| |||| |||||| ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16677370 |
aaacttcaccagagaaatcattattgccaatagataaggaatttaaagatgagaggtttcctagagttgaaggaatgaaaccacttaacatgttcatgga |
16677271 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||||||| | || ||||||||||||||||||||||||||||||||||| | ||||||| ||| | | || |||||||||| |||||| ||||||| |
|
|
| T |
16677270 |
aagatcaaggtcttgaatatgtgctagttgacctatttcatctggaattgatagttgtagttggttttgagagacatcaaggtgtctcaaatgttgaagg |
16677171 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatatt |
347 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||| |
|
|
| T |
16677170 |
tttaacaagcttgaaggtatctcaccatgtatatt |
16677136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 13 - 344
Target Start/End: Complemental strand, 19393400 - 19393069
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||| |
|
|
| T |
19393400 |
tgaaaaggaggaacccaattcaaatcaaattggaattcaaaaattgaattactcaagtttagtgaaactaaactatggagtttggaaaaatgtaaatttg |
19393301 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||| ||| || ||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||| | |
|
|
| T |
19393300 |
aaatttcaccagagaaattgttatcgctaatagataagtaatttaaggatgagaggtttcctaaagttgaaggaataaaaccactcaacatgtttttcga |
19393201 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
|| |||||| |||| || |||| | ||||| |||||| ||||| |||||| ||| ||||||| || |||| ||||| ||||| | |||||||||||||| |
|
|
| T |
19393200 |
aacatcaaggtattgaagatgttcaagttggcctattccatcttgaattgatccttgtagttgattttcaaagagattaaggtatctcaaattttgaagg |
19393101 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatat |
344 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |
|
|
| T |
19393100 |
tttagcaaacttgaaggtatctcaccatatat |
19393069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 13 - 398
Target Start/End: Complemental strand, 18116216 - 18115831
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||| |||||||||||||| ||||||| ||||| || ||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
18116216 |
tgaaagggaggaacccaatccaaatcaatctggattacaaaatctgaattacgcaagtctagatgatctaaactagagagtttggaaaaatgtaaatttg |
18116117 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| | || || ||| || |
|
|
| T |
18116116 |
aaatttcaccagagaaattattagagccaatagataagtaatttagggaagagagatttcctagagttgaaggaatagatccttgtagttggttttcaga |
18116017 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
|||||||| | || |||||| || ||||| |||||||| |||||||||| | | ||||||| ||||| ||||| ||||| | |||||||||||||| |
|
|
| T |
18116016 |
gagatcaagttgttgaatatgggcaagttggcctatttcttctggaattgattcttgtagttggttataggagagataaaggtctctcaaattttgaagg |
18115917 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | | |||||| |||| | |||||||||||||| | |||||||||||| |
|
|
| T |
18115916 |
tttagcaagcttgaaggtatctcaccatatatattactctgtgaaaggtcaagataagtgagatctttggtaagattaaaaaaccc |
18115831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 19375873 - 19375665
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |
|
|
| T |
19375873 |
tgaaaaggaggaacccaatccaaatcaaattggaatacaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaagttaatttag |
19375774 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | | |
|
|
| T |
19375773 |
aaatttcaccagagaaattattagagccaatagataacaaatttaaggatgagaggtttcctagagttaaaggaatgaaaccacttaacatgttcgatga |
19375674 |
T |
|
| Q |
213 |
aagatcaag |
221 |
Q |
| |
|
||||||||| |
|
|
| T |
19375673 |
aagatcaag |
19375665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 13 - 350
Target Start/End: Complemental strand, 19334260 - 19333923
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||||||||||| |||||| |||||||| ||||||| || |||||||| ||||| |||||| || ||||| || |||||||||||||| ||| |||| |
|
|
| T |
19334260 |
tgaaaaggaggaatccaatccaaatcaaattggaatacaatatttgaataactcatgtctagcaaacctaaagtatagagtttggaaaaagttaattttg |
19334161 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || || ||| || |
|
|
| T |
19334160 |
aaatttcaccagagaaattattagagccaataaataagtaatttaaggaagagaggtttcctagagttgaaggaatagatccttgtagttggttttcaga |
19334061 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
|||||||| | || |||||| | ||||| |||||||| ||||||| || ||| ||||||| ||||| | ||||||||||||| |||||||||||||| |
|
|
| T |
19334060 |
gagatcaagttgttgaatatgggaaagttggcctatttcttctggaactgatccttgtagttggttataagagagatcaaggtgtctcaaattttgaagg |
19333961 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgtt |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19333960 |
tttagcaagcttgaaggtatctcaccatatatattgtt |
19333923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 13 - 398
Target Start/End: Complemental strand, 19414435 - 19414050
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||| | |||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
19414435 |
tgaaaagggggaacccaatccaaatcaaattggaaaacaaaacttgaattactcaagtctagatgatttaaactagagagtttggaaaaatataaattta |
19414336 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
|||| | ||||||||||||||| || ||||| |||||||||||||||| | ||| ||||||||||||||| ||||||| || || ||| || |
|
|
| T |
19414335 |
aaatattaccagagaaattattcgaaccaatagataagtaatttaaggatgggagatttcctagagttgaaagaatgaatccttgtagttggttttcaga |
19414236 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||| || | || ||||||||||| || |||||| ||||||||| || || ||||||| ||||| |||||||||||| |||||||||||||| |
|
|
| T |
19414235 |
gagatcgaggtgttgaatatgtgctaatttgcctattccatctggaactgacccttgtagttggttatttgatagatcaaggtgtctcaaattttgaagg |
19414136 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||| |||||| |||| |||||||||||||||||| |||||||||||| |
|
|
| T |
19414135 |
tttagcaagcttgaaggtatctcaccatgtatattgctatatgaaaggtcaagagaggtgagatctttggtgagattaaaaaaccc |
19414050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 13 - 274
Target Start/End: Complemental strand, 19424938 - 19424677
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |
|
|
| T |
19424938 |
tgaaaaggaggaacccaatccaaatcaaattggaatacaaaagttgaattactcaagtctagttcttctaaactagagagtttggaaaaagttaattttg |
19424839 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||||||||| |||||||||||| |||||||||||||| || | |
|
|
| T |
19424838 |
aaatttcacctgagaatttattagagccaatccataagtgatttaatgatgagaggtttcctaaagttgaaggaattaaaccacttaacatattgtttga |
19424739 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtt |
274 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||| | | ||||||| ||| ||||||| |
|
|
| T |
19424738 |
aagatcaaggctttgaatatgtgctagttggcctattccgtgcggaattgatccttgtagtt |
19424677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 17727286 - 17727461
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17727286 |
tgaaaaggaggaacccaatccaaatcaaattggaatgcaaaatttgaattactcaattgtagtgaatctaaactagagagtttggaaaaagttaaatttg |
17727385 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaat |
188 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| || |||| || |||||||||||||||||||||||||| |
|
|
| T |
17727386 |
aaatttcaccagagaaattattagaaccaatagataagaaaattaaagatgagaggtttcctagagttgaaggaat |
17727461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 19028515 - 19028690
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19028515 |
tgaaaaggaggaacccaatccaaatcaaattggaatgcaaaatttgaattactcaattgtagtgaatctaaactagagagtttggaaaaagttaaatttg |
19028614 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaat |
188 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| || |||| || |||||||||||||||||||||||||| |
|
|
| T |
19028615 |
aaatttcaccagagaaattattagaaccaatagataagaaaattaaagatgagaggtttcctagagttgaaggaat |
19028690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 84 - 398
Target Start/End: Complemental strand, 19461712 - 19461398
Alignment:
| Q |
84 |
actagagagtttggaaaaaagtaaatttgaaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaa |
183 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19461712 |
actagagagtttggaaaaatgtaaatttgaaatttcaccagagaaattattagagccaatagataagtaatttagggaagagaggtttcctagagttgaa |
19461613 |
T |
|
| Q |
184 |
ggaatgaaaccacttaacatgttccaagcaagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaa |
283 |
Q |
| |
|
||||| | || || ||| || |||||||| | || |||||| || ||||| |||||||| | ||||| || | | ||||||| ||||| | |
|
|
| T |
19461612 |
ggaatagatccttgtagttggttttcagagagatcaagttgttgaatatgggcaagttggcctatttcttttggaactgattcttgtagttggttataag |
19461513 |
T |
|
| Q |
284 |
cgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggt |
383 |
Q |
| |
|
||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||| | | |||||| |||| | |||||||||||||| |
|
|
| T |
19461512 |
agagataaaggtctctcaaattttgaaggtttagcaagcttgaaggtatctcaccgtatatattactctgtgaaaggtcaagataagtgagatctttggt |
19461413 |
T |
|
| Q |
384 |
gaaattaaaaaaccc |
398 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
19461412 |
gagattaaaaaaccc |
19461398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 18103597 - 18103422
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||||||||| |||||||| | |||||| ||||||| ||||||||| ||||||||||||||| |||||||||| |||||||||||||| | ||||||| |
|
|
| T |
18103597 |
tgaaaaggaggtacccaatccatatcaaattggaatacaaaatttgagttactcaagtctagttcatctaaactacagagtttggaaaaatgcaaatttg |
18103498 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaat |
188 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
18103497 |
aaattttaccagagaaattattagagccaataaataagtaatttaaggatgagaggtttcctagagttgagggaat |
18103422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 18016273 - 18016098
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| || | || |
|
|
| T |
18016273 |
tgaaaaggaggaacccaatccaaatcaaattggaattcaaaatttgaattactcaagtctaaatgatttaaactagagagtttggaaaaaaaaaattgtg |
18016174 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaat |
188 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| || ||||||| || ||||||||||||||||||||||| |
|
|
| T |
18016173 |
aaatttcaccagagaaattattagagccaatcgataaggaaattaaggatgacaggtttcctagagttgaaggaat |
18016098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 18144440 - 18144267
Alignment:
| Q |
14 |
gaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttga |
113 |
Q |
| |
|
|||||||||||||| |||| |||||||| ||||||| |||| |||||| |||| | |||| | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
18144440 |
gaaaaggaggaacctaatccaaatcaaattggaatacaaaacgtgaattcctcatctatagtacaactaaactagagagtttggaaaaatgtaaatttga |
18144341 |
T |
|
| Q |
114 |
aatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaat |
188 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
18144340 |
aatttcaccagagaaattgttagagccaatagataagtaaattaaggaagagagg-ttcctggagttgaaggaat |
18144267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 19437209 - 19437047
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| | |||||| | ||||| |||||||||||| |||||||| || |||||||||||||||||||||||||| ||| |||| |
|
|
| T |
19437209 |
tgaaaaggaggaacccaatccatatcaaatttgaatacaaaatttgaattgctcaagtcgagccaatctaaactagagagtttggaaaaagttaattttg |
19437110 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttccta |
175 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||| |||| ||||||| ||||||||||||| |
|
|
| T |
19437109 |
aaatttcaccagagaaattattagaaccaatagataggtaacttaaggatgagaggtttccta |
19437047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 19464607 - 19464444
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||| | | ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
19464607 |
tgaaaaggaggaacccaatccaaatcaatttgggagacaaaatttgaattactcaagtctaaataatgtaaactagagagtttggaaaaagttaaatttg |
19464508 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctag |
176 |
Q |
| |
|
|||||||||| |||||||| |||||||| || |||||| |||||| || |||||||||||||| |
|
|
| T |
19464507 |
aaatttcacctgagaaattgttagagccgatagataagtcatttaaagatgagaggtttcctag |
19464444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 244 - 398
Target Start/End: Complemental strand, 19437050 - 19436896
Alignment:
| Q |
244 |
cctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatata |
343 |
Q |
| |
|
|||||| |||||||||||| ||| ||||||| ||||| | ||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||| | |
|
|
| T |
19437050 |
cctattccatctggaattgatccttgtagttggttataagagagatcaaggtgtctcaaattttgaaggtttagcaagctagaaggtatctccccatgaa |
19436951 |
T |
|
| Q |
344 |
tattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
19436950 |
tattgttaaacgaaaggtaaagagaggtgagatctttggtgagattaaaaaaccc |
19436896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 18103426 - 18103306
Alignment:
| Q |
256 |
ggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgt |
355 |
Q |
| |
|
||||||| ||| ||||||| ||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18103426 |
ggaattgatccttgtagttggttataagagagatcaaggtgtctcaaattttgaaggtttagcaagcttgaaggtatctcaccatatatattgttatcgc |
18103327 |
T |
|
| Q |
356 |
aaaggtaaagacaggtgagat |
376 |
Q |
| |
|
||||| |||| ||||||||| |
|
|
| T |
18103326 |
gaaggtgaagataggtgagat |
18103306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 398
Target Start/End: Complemental strand, 19424636 - 19424482
Alignment:
| Q |
244 |
cctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatata |
343 |
Q |
| |
|
|||||| |||||||||||| ||| | ||||| ||| ||| ||||||||||| | |||||||||||||| |||||||||||||||||||| |||||| || |
|
|
| T |
19424636 |
cctattccatctggaattgatccttatagttggttttcagagagatcaaggtatgtcaaattttgaaggtttagcaagcttgaaggtatcccaccatgta |
19424537 |
T |
|
| Q |
344 |
tattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
||||| | | || ||| |||| |||||||||||||||||| |||||||||||| |
|
|
| T |
19424536 |
tattgctctggtgaagtctaagataggtgagatctttggtgagattaaaaaaccc |
19424482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 398
Target Start/End: Complemental strand, 18016090 - 18015960
Alignment:
| Q |
268 |
tgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagac |
367 |
Q |
| |
|
||||||| ||||| | ||||| ||| ||| |||||||||||||| |||||||||| |||||||||||||||| ||||||| ||| |||||| |||| |
|
|
| T |
18016090 |
tgtagttggttattagagagatgaagttgtctcaaattttgaaggtttagcaagctagaaggtatctcaccatgtatattgctatatgaaaggtcaagag |
18015991 |
T |
|
| Q |
368 |
aggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |
|
|
| T |
18015990 |
aggtgagatctttggtgagattaaaaaaccc |
18015960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 19375672 - 19375560
Alignment:
| Q |
286 |
agatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtga |
385 |
Q |
| |
|
|||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||| || | ||||| |||| |||||| ||||||||||| |
|
|
| T |
19375672 |
agatcaagttgtctcaaatttggaaggtttagcaagcttgaaggtatctcaccatatatattattcatcgcaaggtcaagataggtgatatctttggtga |
19375573 |
T |
|
| Q |
386 |
aattaaaaaaccc |
398 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19375572 |
gattaaaaaaccc |
19375560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 17727685 - 17727812
Alignment:
| Q |
268 |
tgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagac |
367 |
Q |
| |
|
||||||| ||| ||| |||| |||||||| | |||||||||||| ||| |||||| |||||||||||||||| ||||||| | | || ||||| || | |
|
|
| T |
17727685 |
tgtagttggttttcagagagaccaaggtgtgttaaattttgaaggtttaccaagctagaaggtatctcaccatgtatattgctctcgtgaaggtcaacat |
17727784 |
T |
|
| Q |
368 |
aggtgagatctttggtgaaattaaaaaa |
395 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
17727785 |
aggtgagatctttggtgagattaaaaaa |
17727812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 19028914 - 19029041
Alignment:
| Q |
268 |
tgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagac |
367 |
Q |
| |
|
||||||| ||| ||| |||| |||||||| | |||||||||||| ||| |||||| |||||||||||||||| ||||||| | | || ||||| || | |
|
|
| T |
19028914 |
tgtagttggttttcagagagaccaaggtgtgttaaattttgaaggtttaccaagctagaaggtatctcaccatgtatattgctctcgtgaaggtcaacat |
19029013 |
T |
|
| Q |
368 |
aggtgagatctttggtgaaattaaaaaa |
395 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
19029014 |
aggtgagatctttggtgagattaaaaaa |
19029041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 347
Target Start/End: Complemental strand, 18144255 - 18144146
Alignment:
| Q |
238 |
agttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcac |
337 |
Q |
| |
|
||||| |||||||| ||||||| || ||| |||| | ||||| || ||||||||||| | || | || |||||| |||||||||||||||||| |||| |
|
|
| T |
18144255 |
agttggcctatttcttctggaactgatccttgtaactggttatgaaagagatcaaggtatctcgatttctgaaggtttagcaagcttgaaggtaagtcac |
18144156 |
T |
|
| Q |
338 |
catatatatt |
347 |
Q |
| |
|
|||||||||| |
|
|
| T |
18144155 |
catatatatt |
18144146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 14 - 398
Target Start/End: Original strand, 3853 - 4237
Alignment:
| Q |
14 |
gaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttga |
113 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3853 |
gaaaaggaggaacccaatccaaatcaaatcggaatacaatatttgaattactcaagtatagttcatctaaactagagagtttggaaaaagttaaatttga |
3952 |
T |
|
| Q |
114 |
aatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||| | | |
|
|
| T |
3953 |
aatttcaccagagaaattattagagccaatagataaggaatgtaaggatgagaggtttcctagagttacaggaatgaaaccacttaacatgttgatggaa |
4052 |
T |
|
| Q |
214 |
agatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaaggg |
313 |
Q |
| |
|
|||||||| | || ||||| |||||||||||||||| ||| || || || ||| ||||||| ||| ||| ||||||||| ||| |||||||||||||| |
|
|
| T |
4053 |
agatcaaggtgttgaatatttgctagttgacctattccatgtgaaactgatccttgtagttggttttcagagagatcaagatgtctcaaattttgaaggt |
4152 |
T |
|
| Q |
314 |
ttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| || | ||||| |||| |||||| ||||||||||| |||||||||||| |
|
|
| T |
4153 |
ttagcaagctacgaggtatctcaccatatatattattttgcgcaaggtcaagagaggtgatatctttggtgagattaaaaaaccc |
4237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 14 - 398
Target Start/End: Original strand, 3323 - 3707
Alignment:
| Q |
14 |
gaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttga |
113 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3323 |
gaaaaggaggaacccaatccaaatcaaatcggaatacaatatttgaattactcaagtatagttcatctaaactagagagtttggaaaaagttaaatttga |
3422 |
T |
|
| Q |
114 |
aatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||| | | |
|
|
| T |
3423 |
aatttcaccagagaaattattagagccaatagataaggaatgtaaggatgagaggtttcctagagttacaggaatgaaaccacttaacatgttgatggaa |
3522 |
T |
|
| Q |
214 |
agatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaaggg |
313 |
Q |
| |
|
|||||||| | || ||||| |||||||||||||||| ||| || || || ||| ||||||| ||| ||| ||||||||| ||| |||||||||||||| |
|
|
| T |
3523 |
agatcaaggtgttgaatatttgctagttgacctattccatgtgaaactgatccttgtagttggttttcagagagatcaagatgtctcaaattttgaaggt |
3622 |
T |
|
| Q |
314 |
ttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| || | ||||| |||| |||||| ||||||||||| |||||||||||| |
|
|
| T |
3623 |
ttagcaagctacgaggtatctcaccatatatattattttgcgcaaggtcaagagaggtgatatctttggtgagattaaaaaaccc |
3707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 13 - 398
Target Start/End: Original strand, 2710325 - 2710710
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||| | || ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2710325 |
tgaaaaggaggaacccaattcaaatcaaattggaatacacaagttgaactactcacgtctagtgaatctaaactagagagtttggaaaaagttaaatttg |
2710424 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| |||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
2710425 |
aaatttcaccagaaaaatgattagtgccaataagtaaggactttaaggatgagaggtttcctagagttgaaggaatgaaaccgcttaacatgttcatgga |
2710524 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||||||| |||| ||||| ||||||||| |||||||||||| |||||||||| ||||||| ||||| | |||| ||| ||| |||||||| |||| |
|
|
| T |
2710525 |
aagatcaaggtattgaatatatgctagttggcctatttcatcttgaattggtccttgtagttggttattagaaagataaagttgtctcaaatttcgaagc |
2710624 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
||| |||||| |||||||||||||||| ||||||| ||| |||||| |||| || ||| | |||||||| |||||||||||| |
|
|
| T |
2710625 |
tttaacaagctagaaggtatctcaccatgtatattgctatatgaaaggtcaagatagttgatgtgtttggtgagattaaaaaaccc |
2710710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 15535784 - 15535547
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
|||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| |
|
|
| T |
15535784 |
tgaaaaggaggaacccaatccaaataaaattggaatacaaaatttgaattactcaagtctagtgaatctaaaccagagagtttggaaaaagttaattttg |
15535685 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
|| || ||||||| ||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
15535684 |
aatttgcaccagataaattattagatccaatagataaggaatttaaggatgagaggtttcctagagttgaaggaatgaaagaacttaacatgttcctaga |
15535585 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctattt |
250 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
15535584 |
aagatcaagatattgaatatgtgctagttggcctattt |
15535547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 398
Target Start/End: Complemental strand, 15532369 - 15532217
Alignment:
| Q |
246 |
tatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatata |
345 |
Q |
| |
|
||||| ||||||||||| ||| ||||||| ||||| | |||||||||| | ||||||||||||| ||||||| ||||||||||||||| || |||| |
|
|
| T |
15532369 |
tattttatctggaattgatccttgtagttggttattagagagatcaaggattctcaaattttgaagatttagcaaacttgaaggtatctcatcaagtata |
15532270 |
T |
|
| Q |
346 |
ttgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|| || || |||||| |||| | |||||| ||||| | |||||||||||| |
|
|
| T |
15532269 |
ttattttttgaaaggtcaagataattgagatatttggaaagattaaaaaaccc |
15532217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 14 - 398
Target Start/End: Complemental strand, 5653 - 5269
Alignment:
| Q |
14 |
gaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttga |
113 |
Q |
| |
|
||||||||||||||||||| |||||||| | |||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5653 |
gaaaaggaggaacccaatccaaatcaaatcgaaatacaatatttgaattactcaagtatagttcatctaaactagagagtttggaaaaagttaaatttga |
5554 |
T |
|
| Q |
114 |
aatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||| ||| |||||| |||||||||||||||||| |||||||||||||| ||||||||| | | |
|
|
| T |
5553 |
aatttcaccagagaaattattagagccagtagataaggaatgtaaggatgagaggtttcctagagttacaggaatgaaaccacctaacatgttgatggaa |
5454 |
T |
|
| Q |
214 |
agatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaaggg |
313 |
Q |
| |
|
|||||||| | || ||||| |||||||||||||||| ||| || || || ||| ||||||| ||| ||| ||||||||| ||| |||||||||||||| |
|
|
| T |
5453 |
agatcaaggtgttgaatatttgctagttgacctattccatgtgaaactgatccttgtagttggttttcagagagatcaagatgtctcaaattttgaaggt |
5354 |
T |
|
| Q |
314 |
ttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||||| || | ||||| |||| |||||| ||||||||| | |||||||||||| |
|
|
| T |
5353 |
ttagcatgctagaaggtatctcgccatatatattattttgcgcaaggtcaagagaggtgatatctttggttagattaaaaaaccc |
5269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 13666701 - 13666874
Alignment:
| Q |
15 |
aaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttgaa |
114 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
13666701 |
aaaaggaggaacccaatccaaatcaaattggaatacaagctttgaattactcaagcatagtgtgtctaaactagagagtttagaaaaagttaaatttgaa |
13666800 |
T |
|
| Q |
115 |
atttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaat |
188 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13666801 |
atttcaccagagaaattattagagctaatagataagtaatttaaggatgagaggtttcctagagttgaaggaat |
13666874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 13666870 - 13666960
Alignment:
| Q |
256 |
ggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagggttagcaagcttgaaggtatctcaccatatatat |
346 |
Q |
| |
|
||||||| ||| ||||| ||||| |||| |||||||| | | ||||| |||||| | |||||||| |||||||||| | ||||||||||| |
|
|
| T |
13666870 |
ggaattgatccttgtaggttgttttcaaagagatcaatatatctcaaagtttgaatgtttagcaaggttgaaggtattttaccatatatat |
13666960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 8459799 - 8459550
Alignment:
| Q |
13 |
tgaaaaggaggaacccaatctaaatcaaactggaatagaaaatttgaattactcaagtctagtgaatctaaactagagagtttggaaaaaagtaaatttg |
112 |
Q |
| |
|
||||| |||||||||||||| ||||| || || |||| || |||| || |||| |||||||| || ||| |||| ||||||||||||| | |||| |
|
|
| T |
8459799 |
tgaaatggaggaacccaatccaaatcgaattgaaatacaatatttaaactacttaagtctagaaaacctagactatagagtttggaaaaggttctgtttg |
8459700 |
T |
|
| Q |
113 |
aaatttcaccagagaaattattagagccaatccataagtaatttaaggaagagaggtttcctagagttgaaggaatgaaaccacttaacatgttccaagc |
212 |
Q |
| |
|
||||||||| |||||| ||||| |||||||| ||||| ||| |||||| ||||||||||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
8459699 |
aaatttcactagagaagttatttgagccaatagataaggaatataaggatgagaggtttccaagagtagaaggaatgaaaccacttaacatgtttttgga |
8459600 |
T |
|
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattg |
262 |
Q |
| |
|
||||||||| |||| ||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
8459599 |
aagatcaaggtattgaatatgtgctagttggcctattccatacggaattg |
8459550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 398
Target Start/End: Complemental strand, 8459527 - 8459342
Alignment:
| Q |
213 |
aagatcaagatattcaatatgtgctagttgacctatttcatctggaattggtccctgtagtttgttatcaacgagatcaaggtgtttcaaattttgaagg |
312 |
Q |
| |
|
||||||||| |||| ||||||| ||||||| | ||| ||| |||||||| ||| ||||||| ||||| | ||||||||||||| |||||||| ||||| |
|
|
| T |
8459527 |
aagatcaaggtatttaatatgttctagttggcggattccatttggaattgatccttgtagttggttataagagagatcaaggtgtctcaaatttggaagg |
8459428 |
T |
|
| Q |
313 |
gttagcaagcttgaaggtatctcaccatatatattgttattgtaaaggtaaagacaggtgagatctttggtgaaattaaaaaaccc |
398 |
Q |
| |
|
|| |||||||||||| ||||| |||||||||| | | |||||| |||| |||||| ||||||||| | |||||||||||| |
|
|
| T |
8459427 |
tataacaagcttgaaggcatctcgccatatatatggcaaaccgaaaggtcaagataggtgatatctttggtcagattaaaaaaccc |
8459342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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