View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1381_low_2 (Length: 470)

Name: NF1381_low_2
Description: NF1381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1381_low_2
NF1381_low_2
[»] chr4 (52 HSPs)
chr4 (6-90)||(49308045-49308129)
chr4 (1-91)||(19750588-19750678)
chr4 (1-91)||(19789128-19789218)
chr4 (12-91)||(13509383-13509462)
chr4 (1-93)||(26421635-26421727)
chr4 (1-90)||(5526139-5526228)
chr4 (1-93)||(48780243-48780336)
chr4 (1-88)||(31600998-31601086)
chr4 (1-92)||(8757671-8757762)
chr4 (1-90)||(1835115-1835205)
chr4 (1-93)||(25685835-25685928)
chr4 (1-88)||(10471401-10471489)
chr4 (7-90)||(17382991-17383074)
chr4 (7-90)||(17388230-17388313)
chr4 (12-89)||(31599788-31599866)
chr4 (1-85)||(8758850-8758935)
chr4 (1-85)||(12129626-12129711)
chr4 (1-85)||(35935546-35935631)
chr4 (1-89)||(5525359-5525447)
chr4 (13-91)||(1290223-1290302)
chr4 (14-89)||(14868889-14868964)
chr4 (14-89)||(14876970-14877045)
chr4 (7-88)||(1834119-1834201)
chr4 (12-89)||(3927665-3927743)
chr4 (1-85)||(8155741-8155825)
chr4 (1-88)||(25684934-25685022)
chr4 (13-91)||(1963193-1963272)
chr4 (1-89)||(13386545-13386635)
chr4 (12-89)||(3928882-3928960)
chr4 (14-90)||(13386012-13386090)
chr4 (1-91)||(37728578-37728668)
chr4 (9-91)||(49306772-49306854)
chr4 (1-89)||(10470545-10470634)
chr4 (1-88)||(1964454-1964542)
chr4 (1-88)||(10447006-10447095)
chr4 (1-78)||(21539084-21539162)
chr4 (1-93)||(50909685-50909779)
chr4 (12-91)||(10448284-10448364)
chr4 (1-85)||(35934347-35934430)
chr4 (13-85)||(55602379-55602451)
chr4 (7-91)||(55603550-55603634)
chr4 (3-90)||(46637680-46637767)
chr4 (7-89)||(48781065-48781147)
chr4 (12-88)||(33310113-33310187)
chr4 (7-91)||(21177994-21178078)
chr4 (7-90)||(52491626-52491710)
chr4 (13-90)||(50909271-50909348)
chr4 (33-92)||(1961172-1961232)
chr4 (32-92)||(10726192-10726252)
chr4 (32-92)||(10939961-10940021)
chr4 (33-88)||(13394536-13394592)
chr4 (33-88)||(13397675-13397731)
[»] chr7 (32 HSPs)
chr7 (1-93)||(7501865-7501958)
chr7 (1-88)||(47525380-47525468)
chr7 (6-91)||(127334-127419)
chr7 (1-87)||(3227109-3227195)
chr7 (1-90)||(17782566-17782656)
chr7 (1-93)||(3227607-3227700)
chr7 (1-88)||(18371424-18371512)
chr7 (1-91)||(31949319-31949410)
chr7 (15-93)||(34174010-34174088)
chr7 (13-92)||(22630477-22630557)
chr7 (12-90)||(11658377-11658456)
chr7 (1-75)||(18372470-18372544)
chr7 (1-88)||(31659622-31659711)
chr7 (1-89)||(7500454-7500542)
chr7 (1-86)||(17781663-17781749)
chr7 (1-90)||(31949815-31949905)
chr7 (1-89)||(47369780-47369869)
chr7 (12-83)||(14999179-14999249)
chr7 (15-81)||(47524532-47524599)
chr7 (1-85)||(128614-128699)
chr7 (17-89)||(20163585-20163658)
chr7 (1-90)||(21505414-21505502)
chr7 (7-85)||(11662570-11662649)
chr7 (13-90)||(42886311-42886389)
chr7 (7-85)||(43900507-43900585)
chr7 (42-92)||(46483562-46483612)
chr7 (12-88)||(48934927-48935004)
chr7 (1-90)||(22629481-22629574)
chr7 (31-90)||(14998006-14998067)
chr7 (1-70)||(34351511-34351580)
chr7 (33-89)||(42271580-42271637)
chr7 (65-93)||(34153036-34153064)
[»] chr3 (53 HSPs)
chr3 (281-353)||(23034371-23034443)
chr3 (1-89)||(24516459-24516548)
chr3 (7-91)||(12700172-12700255)
chr3 (1-91)||(7267641-7267731)
chr3 (12-90)||(7268851-7268929)
chr3 (1-90)||(29931224-29931314)
chr3 (1-90)||(29980378-29980468)
chr3 (18-91)||(11671371-11671444)
chr3 (1-89)||(29932712-29932800)
chr3 (1-89)||(29981866-29981954)
chr3 (1-88)||(47614185-47614273)
chr3 (1-91)||(5029696-5029786)
chr3 (1-90)||(19984847-19984937)
chr3 (1-90)||(47610593-47610683)
chr3 (164-217)||(23034254-23034307)
chr3 (1-89)||(54540803-54540892)
chr3 (13-91)||(7758399-7758478)
chr3 (7-90)||(28262191-28262274)
chr3 (1-87)||(8456479-8456565)
chr3 (7-89)||(12703519-12703601)
chr3 (1-90)||(22776825-22776915)
chr3 (12-89)||(54539754-54539832)
chr3 (13-89)||(46721245-46721322)
chr3 (31-91)||(47615591-47615652)
chr3 (7-90)||(28263130-28263214)
chr3 (13-88)||(46719941-46720017)
chr3 (1-88)||(51469972-51470060)
chr3 (1-93)||(51470468-51470560)
chr3 (1-88)||(52840617-52840705)
chr3 (1-89)||(55192008-55192096)
chr3 (1-91)||(47609694-47609785)
chr3 (1-90)||(51038803-51038893)
chr3 (14-90)||(5001198-5001275)
chr3 (1-92)||(534495-534587)
chr3 (13-88)||(535807-535883)
chr3 (12-90)||(19986094-19986175)
chr3 (7-92)||(52281566-52281652)
chr3 (7-89)||(18442629-18442713)
chr3 (7-89)||(19487703-19487787)
chr3 (7-91)||(53614816-53614901)
chr3 (7-88)||(18456082-18456165)
chr3 (1-88)||(49216247-49216335)
chr3 (7-90)||(52276302-52276386)
chr3 (1-91)||(8875903-8875994)
chr3 (35-81)||(22775783-22775829)
chr3 (12-85)||(34940211-34940284)
chr3 (12-85)||(54987031-54987103)
chr3 (12-75)||(11670398-11670461)
chr3 (13-88)||(51037536-51037611)
chr3 (7-88)||(53901407-53901487)
chr3 (13-65)||(6249633-6249685)
chr3 (33-88)||(27852753-27852809)
chr3 (36-91)||(39844245-39844301)
[»] chr5 (32 HSPs)
chr5 (1-91)||(25523066-25523157)
chr5 (7-89)||(19752911-19752993)
chr5 (1-90)||(33160299-33160389)
chr5 (1-90)||(5778849-5778939)
chr5 (13-90)||(16650880-16650958)
chr5 (1-93)||(20214191-20214283)
chr5 (1-88)||(25056394-25056482)
chr5 (6-88)||(22940640-22940723)
chr5 (1-91)||(5777898-5777987)
chr5 (12-89)||(18485137-18485215)
chr5 (1-90)||(18486915-18487005)
chr5 (12-89)||(36486512-36486590)
chr5 (12-85)||(28539844-28539917)
chr5 (7-90)||(19754149-19754234)
chr5 (12-90)||(25524151-25524231)
chr5 (1-89)||(33158097-33158186)
chr5 (13-91)||(28538673-28538752)
chr5 (1-90)||(40255685-40255775)
chr5 (12-88)||(1796054-1796131)
chr5 (8-90)||(5730439-5730523)
chr5 (7-91)||(20216782-20216867)
chr5 (1-90)||(25055410-25055500)
chr5 (9-90)||(18154492-18154573)
chr5 (12-85)||(24332916-24332990)
chr5 (12-85)||(42195137-42195209)
chr5 (1-89)||(21835040-21835128)
chr5 (32-85)||(5961438-5961492)
chr5 (13-71)||(7311608-7311666)
chr5 (1-86)||(36485302-36485388)
chr5 (13-89)||(1015483-1015560)
chr5 (15-68)||(34893686-34893739)
chr5 (36-91)||(2373144-2373200)
[»] chr2 (34 HSPs)
chr2 (7-90)||(36449776-36449860)
chr2 (13-90)||(38840518-38840596)
chr2 (13-91)||(18906012-18906091)
chr2 (7-90)||(18797244-18797329)
chr2 (12-92)||(18904363-18904444)
chr2 (13-91)||(7899907-7899986)
chr2 (13-92)||(23869560-23869639)
chr2 (1-91)||(38839239-38839330)
chr2 (1-90)||(7898689-7898779)
chr2 (7-88)||(18299373-18299455)
chr2 (12-93)||(18868919-18869001)
chr2 (12-89)||(22848190-22848268)
chr2 (7-89)||(24475224-24475306)
chr2 (12-89)||(802615-802692)
chr2 (14-91)||(36450947-36451024)
chr2 (1-88)||(1034482-1034570)
chr2 (1-88)||(41878092-41878182)
chr2 (36-87)||(1033212-1033263)
chr2 (1-91)||(11938802-11938892)
chr2 (5-88)||(24476861-24476943)
chr2 (13-89)||(11258836-11258913)
chr2 (6-87)||(18300742-18300822)
chr2 (1-89)||(22587967-22588055)
chr2 (13-92)||(41879237-41879317)
chr2 (12-89)||(11257621-11257698)
chr2 (31-89)||(21837298-21837355)
chr2 (6-85)||(28617926-28618005)
chr2 (13-87)||(13030293-13030365)
chr2 (12-85)||(13567975-13568049)
chr2 (12-89)||(13570581-13570659)
chr2 (7-69)||(32739643-32739705)
chr2 (12-91)||(16446151-16446231)
chr2 (33-85)||(13830270-13830322)
chr2 (36-88)||(21837070-21837121)
[»] chr8 (43 HSPs)
chr8 (7-90)||(5513980-5514063)
chr8 (1-89)||(22221377-22221466)
chr8 (1-89)||(22227719-22227808)
chr8 (1-88)||(10006344-10006432)
chr8 (15-85)||(29968364-29968434)
chr8 (1-89)||(8388463-8388550)
chr8 (1-89)||(12353374-12353461)
chr8 (4-87)||(18979136-18979220)
chr8 (12-90)||(10007787-10007866)
chr8 (1-79)||(18978029-18978107)
chr8 (1-88)||(22220388-22220476)
chr8 (1-79)||(18970920-18970998)
chr8 (13-91)||(24122880-24122958)
chr8 (12-93)||(5514294-5514375)
chr8 (13-88)||(30336526-30336602)
chr8 (1-89)||(32207338-32207425)
chr8 (1-83)||(1824091-1824174)
chr8 (1-83)||(1858536-1858619)
chr8 (8-71)||(24488699-24488762)
chr8 (1-85)||(11287779-11287864)
chr8 (1-89)||(12351920-12352009)
chr8 (12-92)||(32968452-32968533)
chr8 (14-89)||(1823551-1823627)
chr8 (14-89)||(1857996-1858072)
chr8 (7-89)||(38980063-38980146)
chr8 (7-89)||(39011160-39011243)
chr8 (32-93)||(24483138-24483200)
chr8 (7-88)||(38974795-38974877)
chr8 (7-88)||(39005893-39005975)
chr8 (13-89)||(30335638-30335715)
chr8 (12-88)||(32973960-32974037)
chr8 (6-89)||(5003115-5003198)
chr8 (33-91)||(11456635-11456694)
chr8 (33-90)||(11282006-11282064)
chr8 (12-88)||(11283233-11283310)
chr8 (42-90)||(11288914-11288963)
chr8 (42-89)||(45114570-45114618)
chr8 (1-92)||(2379937-2380025)
chr8 (29-88)||(23170040-23170098)
chr8 (13-91)||(24123923-24123999)
chr8 (33-93)||(4518864-4518925)
chr8 (1-89)||(43661836-43661925)
chr8 (33-88)||(36249552-36249608)
[»] chr6 (28 HSPs)
chr6 (7-90)||(10784590-10784675)
chr6 (1-91)||(8659262-8659353)
chr6 (1-91)||(8821870-8821961)
chr6 (1-90)||(7316307-7316397)
chr6 (1-85)||(1829616-1829701)
chr6 (1-90)||(27322081-27322170)
chr6 (1-75)||(10785926-10786000)
chr6 (1-88)||(7314880-7314967)
chr6 (12-91)||(16704521-16704601)
chr6 (1-89)||(3721611-3721700)
chr6 (1-89)||(8660217-8660305)
chr6 (8-91)||(3722527-3722611)
chr6 (1-90)||(14823588-14823679)
chr6 (1-91)||(14822357-14822448)
chr6 (1-90)||(27437826-27437916)
chr6 (1-90)||(34834592-34834682)
chr6 (1-88)||(8822806-8822894)
chr6 (1-85)||(26575067-26575150)
chr6 (14-90)||(27318313-27318389)
chr6 (13-91)||(6842308-6842387)
chr6 (12-87)||(12382735-12382811)
chr6 (7-91)||(17496790-17496879)
chr6 (42-93)||(16703565-16703615)
chr6 (37-90)||(27447962-27448016)
chr6 (13-89)||(3333051-3333128)
chr6 (1-85)||(5658759-5658844)
chr6 (33-92)||(14572424-14572484)
chr6 (42-93)||(16415587-16415639)
[»] scaffold0302 (2 HSPs)
scaffold0302 (7-91)||(17467-17552)
scaffold0302 (3-88)||(18791-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (1-93)||(5451-5544)
scaffold0294 (7-90)||(4440-4524)
[»] chr1 (45 HSPs)
chr1 (7-91)||(45149990-45150074)
chr1 (1-88)||(51684366-51684454)
chr1 (12-90)||(14999283-14999361)
chr1 (6-89)||(35594216-35594299)
chr1 (1-88)||(36613917-36614005)
chr1 (6-89)||(41366148-41366232)
chr1 (1-89)||(45157222-45157310)
chr1 (1-91)||(24422797-24422888)
chr1 (1-88)||(39699780-39699867)
chr1 (1-88)||(41364829-41364916)
chr1 (12-90)||(7674526-7674603)
chr1 (12-93)||(23980490-23980572)
chr1 (12-89)||(52274967-52275045)
chr1 (1-90)||(7983048-7983137)
chr1 (1-88)||(45148581-45148668)
chr1 (1-91)||(11437212-11437303)
chr1 (16-88)||(39222501-39222575)
chr1 (1-89)||(11436041-11436130)
chr1 (13-85)||(24426100-24426173)
chr1 (13-90)||(43058784-43058861)
chr1 (13-90)||(50680330-50680407)
chr1 (1-89)||(52827346-52827435)
chr1 (1-91)||(51685778-51685869)
chr1 (1-91)||(52828083-52828174)
chr1 (12-89)||(39698562-39698640)
chr1 (1-91)||(43060019-43060110)
chr1 (7-89)||(44404441-44404524)
chr1 (1-89)||(33088630-33088719)
chr1 (7-90)||(35067021-35067105)
chr1 (6-91)||(35595209-35595297)
chr1 (6-85)||(37526895-37526975)
chr1 (16-89)||(14999983-15000057)
chr1 (12-85)||(39153140-39153214)
chr1 (1-54)||(44411979-44412032)
chr1 (16-88)||(50681632-50681705)
chr1 (42-93)||(11190380-11190432)
chr1 (33-92)||(16972098-16972158)
chr1 (12-91)||(39151928-39152008)
chr1 (13-88)||(46066525-46066599)
chr1 (1-90)||(7675472-7675561)
chr1 (43-89)||(39221357-39221405)
chr1 (12-85)||(43378737-43378810)
chr1 (13-90)||(16290091-16290170)
chr1 (33-89)||(21945707-21945763)
chr1 (42-89)||(36612852-36612900)
[»] scaffold0019 (2 HSPs)
scaffold0019 (7-88)||(60090-60172)
scaffold0019 (7-87)||(61478-61559)
[»] scaffold0045 (1 HSPs)
scaffold0045 (13-93)||(49109-49190)
[»] scaffold0320 (1 HSPs)
scaffold0320 (12-91)||(19485-19565)
[»] scaffold1303 (1 HSPs)
scaffold1303 (1-90)||(1437-1527)
[»] scaffold0059 (2 HSPs)
scaffold0059 (12-92)||(4754-4834)
scaffold0059 (29-69)||(3695-3735)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-90)||(49446-49536)
scaffold0003 (37-90)||(39342-39396)
[»] scaffold0632 (1 HSPs)
scaffold0632 (12-91)||(3332-3411)
[»] scaffold0227 (1 HSPs)
scaffold0227 (7-88)||(138-220)
[»] scaffold0186 (2 HSPs)
scaffold0186 (2-88)||(23081-23166)
scaffold0186 (6-91)||(23908-23994)
[»] scaffold0586 (2 HSPs)
scaffold0586 (1-91)||(6340-6431)
scaffold0586 (6-90)||(9044-9128)
[»] scaffold0112 (1 HSPs)
scaffold0112 (7-88)||(37148-37229)
[»] scaffold2034 (1 HSPs)
scaffold2034 (12-88)||(233-310)
[»] scaffold0093 (2 HSPs)
scaffold0093 (7-87)||(2484-2564)
scaffold0093 (7-87)||(7107-7187)
[»] scaffold0369 (1 HSPs)
scaffold0369 (13-89)||(13192-13267)


Alignment Details
Target: chr4 (Bit Score: 69; Significance: 9e-31; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 49308045 - 49308129
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49308045 agggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagccta 49308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19750588 - 19750678
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| ||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19750588 tcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagtctaa 19750678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19789218 - 19789128
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| ||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19789218 tcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagtctaa 19789128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 13509383 - 13509462
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  13509383 caaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagttaggggggaaaagtacactttagcctaa 13509462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26421635 - 26421727
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaata 93  Q
    |||||||||| |||||||||||||||  |||||||| ||  |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  26421635 tcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagcctaata 26421727  T

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Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5526139 - 5526228
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  5526139 tcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagccta 5526228  T

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Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48780336 - 48780243
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcctaata 93  Q
    ||||| |||||| ||||||| |||||  |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48780336 tcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcctaata 48780243  T

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Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31600998 - 31601086
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    |||||||||| |||||||||||||||  |||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  31600998 tcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

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Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8757762 - 8757671
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    |||||||||  ||||||||||||||   |||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||||||||    
T  8757762 tcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaaggggaaaaagtgcactttagcctaat 8757671  T

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Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1835115 - 1835205
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  1835115 tcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagccta 1835205  T

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Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25685835 - 25685928
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaata 93  Q
    ||||| |||| | ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  25685835 tcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaata 25685928  T

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Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10471401 - 10471489
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  10471401 tcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

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Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 17383074 - 17382991
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||| |||||||||||||||  |||||| ||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  17383074 ggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagccta 17382991  T

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Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17388230 - 17388313
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||| ||||||||||||||   |||||| ||| | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17388230 ggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagccta 17388313  T

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Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 31599866 - 31599788
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagcct 89  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  31599866 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 31599788  T

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Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8758850 - 8758935
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    |||||||||| ||||||||||||||   |||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||||    
T  8758850 tcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

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Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12129711 - 12129626
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    |||||||||| |||||||||||||||  |||||| ||||| |||||||||||||||| |||||| || ||||||||||||||||||    
T  12129711 tcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

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Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35935546 - 35935631
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    ||||| |||| ||||||||||||||   ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  35935546 tcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

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Target: chr4; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5525447 - 5525359
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||| |||||| ||||||| |||||  |||||||||||  |||||||||||||||| ||||||||||||||||| || ||||||||||    
T  5525447 tcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaaatgtactttagcct 5525359  T

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Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 1290223 - 1290302
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||  ||||||| |||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  1290223 aaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcctaa 1290302  T

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Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 14868964 - 14868889
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||||| ||||| |||||||| |||| ||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  14868964 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 14868889  T

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Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 14876970 - 14877045
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||||| ||||| |||||||| |||| ||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  14876970 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 14877045  T

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Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 1834201 - 1834119
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    |||| ||||||||||||||| |||| |||||||  ||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  1834201 ggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcc 1834119  T

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Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 3927743 - 3927665
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    |||||||||||||||||||| | |||||| ||||| ||||  ||||||||||||| |||||||||||||||||||||||    
T  3927743 caaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcct 3927665  T

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Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8155825 - 8155741
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggg-gctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    ||||| |||| |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  8155825 tcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagttag-ggggaaaagtgcacttta 8155741  T

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Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25685022 - 25684934
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    ||||| |||||| ||||||| |||||  ||||||| |||  |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  25685022 tcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

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Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 1963272 - 1963193
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||  ||| |||| ||| |||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  1963272 aaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcctaa 1963193  T

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Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13386545 - 13386635
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg--aaaagtgcactttagcct 89  Q
    ||||| |||||| ||||||| |||||  |||||| ||||  |||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  13386545 tcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcct 13386635  T

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Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 3928882 - 3928960
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    ||||||||| |||||||||| |||||||| ||||| ||||  |||| ||||||| ||||||||||||||||||||||||    
T  3928882 caaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 3928960  T

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Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 13386090 - 13386012
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagt-ttttaaaagttag-gggggaaaagtgcactttagccta 90  Q
    ||||||| |||||  |||||||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  13386090 aaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

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Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37728578 - 37728668
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||||| ||| |||||||||||||||  ||| |||| ||| |||||||||| ||||||||||||||| || |||| ||||||||| |||||    
T  37728578 tcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagttaggaggaaaaaatgcactttaacctaa 37728668  T

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Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 49306854 - 49306772
Alignment:
Q  9 gggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||||||  ||||||   ||| |||||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  49306854 gggcaaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagttgggggaaaaaagtgcactttagcctaa 49306772  T

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Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10470634 - 10470545
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||| |||||| |||||||  ||||  ||||||| |||  |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  10470634 tcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10470545  T

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Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1964454 - 1964542
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    |||||||||  |||||||||||||||  | | |||||||| ||||||| || |||||||||||| |||| |||||||||||||||||||    
T  1964454 tcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

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Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10447095 - 10447006
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttagcc 88  Q
    ||||| ||||| |||||||| |||||  ||| ||||||||||||||||||| ||||| ||| |||   ||||||||||||||||||||||    
T  10447095 tcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

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Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21539084 - 21539162
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtg 78  Q
    ||||| |||| ||||||||||||||| | ||||||| ||| |||||||||||||||||||| || |||| |||||||||    
T  21539084 tcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

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Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50909685 - 50909779
Alignment:
Q  1 tcttaaggggg-caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagcctaata 93  Q
    ||||||||||| ||||||||||||||| |||| ||||| |  ||||| |||| ||||||||| |||||| || ||||||||||||||||| ||||    
T  50909685 tcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgcactttagccaaata 50909779  T

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Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 10448284 - 10448364
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcctaa 91  Q
    |||||||||||||||  ||| |||||||||||||| |||| ||||| ||| ||||||| ||  ||||||||||||||||||    
T  10448284 caaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcctaa 10448364  T

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Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35934430 - 35934347
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||| ||||||| || |||   |||||||||| | |||||| ||||||||| |||||||| ||||||||||||||||||    
T  35934430 tcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagttag-ggggaaaagtgcacttta 35934347  T

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Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||||||| |||  ||| || |||||||||||||||||| |||||||  |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaaaggggaaaaatgcacttta 55602379  T

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Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 55603550 - 55603634
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||| |||||| ||||||||  |||  |||||  ||||||||||||||||| ||||||| |||| |||||||||||||| |||||    
T  55603550 ggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggggaaaaagtgcactttaacctaa 55603634  T

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Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 46637767 - 46637680
Alignment:
Q  3 ttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||||  |||||||||||||||  ||| ||||| ||||||||  |||||||||||||||| || |||   ||||||||||||||||    
T  46637767 ttaagggaccaaaattgtagtttttgtacatagggagctaaaatcacaagtttttaaaagttcggaggggggagtgcactttagccta 46637680  T

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Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 48781065 - 48781147
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    |||||| ||||||| |||||  |||||||||  | |||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  48781065 gggggctaaattgtggttttagtacttagggacc-aaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcct 48781147  T

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Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 33310113 - 33310187
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||||| |||||||  || |||||| ||||||||| |||||||||||||||||  ||  |||||||||||||||||    
T  33310113 caaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta--ggaaaaaagtgcactttagcc 33310187  T

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Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 21178078 - 21177994
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||| |||||||||||||||  | | ||||||   |||||||||| ||| | ||||||||||||| ||||| |||||||||||||    
T  21178078 ggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagttagggggggaaagtacactttagcctaa 21177994  T

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Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 52491626 - 52491710
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    |||| ||||||||||||||   || |||| || | |||||||||||||||| |||||| |||| |||||||| ||||||||||||    
T  52491626 ggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagccta 52491710  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 50909348 - 50909271
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||||||||||| |||  |||| ||  |||||||||| ||||||||| |||||||  |||| | ||||||||||||    
T  50909348 aaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttaggggaaaaaaatacactttagccta 50909271  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 1961172 - 1961232
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggggaaaa-gtgcactttagcctaat 92  Q
    |||||||| |||||||||| ||||  ||| |||||||| |||| |||||||||||||||||    
T  1961172 tagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcctaat 1961232  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 10726192 - 10726252
Alignment:
Q  32 ttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    |||||||||||||||||||| |||| ||||| ||| ||  ||||||||| || ||||||||    
T  10726192 ttagggggctaaaattgcaacttttgaaaagatagtggttaaaagtgcaattaagcctaat 10726252  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 10939961 - 10940021
Alignment:
Q  32 ttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    |||||||||||||||||||| |||| ||||| ||| ||  ||||||||| || ||||||||    
T  10939961 ttagggggctaaaattgcaacttttgaaaagatagtggttaaaagtgcaattaagcctaat 10940021  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 13394592 - 13394536
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcc 88  Q
    |||||||||||||| ||||  ||||||||  ||||||| ||||||||||||||||||    
T  13394592 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13394536  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 13397731 - 13397675
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcc 88  Q
    |||||||||||||| ||||  ||||||||  ||||||| ||||||||||||||||||    
T  13397731 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13397675  T

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Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7501865 - 7501958
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaata 93  Q
    |||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  7501865 tcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaata 7501958  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47525380 - 47525468
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    ||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  47525380 tcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

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Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 127419 - 127334
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||| ||||||| |||||  |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  127419 agggggctaaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctaa 127334  T

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Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3227195 - 3227109
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagc 87  Q
    |||||||||||| ||||||| |||||  |||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||||    
T  3227195 tcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggggggaaagtgcactttagc 3227109  T

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Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 17782566 - 17782656
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagccta 90  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  17782566 tcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 17782656  T

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Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3227607 - 3227700
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcctaata 93  Q
    ||||| ||| || ||||||| |||||  |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3227607 tcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcctaata 3227700  T

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Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18371512 - 18371424
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    ||||| |||| |||||||||||||||  |||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18371512 tcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31949410 - 31949319
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagcctaa 91  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  31949410 tcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcctaa 31949319  T

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Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 34174010 - 34174088
Alignment:
Q  15 aattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaata 93  Q
    |||||| |||||  |||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctaata 34174088  T

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Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 22630477 - 22630557
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcctaat 92  Q
    ||||||||||||||  || ||||||||| |||||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  22630477 aaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcctaat 22630557  T

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Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 11658456 - 11658377
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    |||||||||||||||  ||| |||||||||||||||||| |||||| |||||| |||||||||||||||| |||||||||    
T  11658456 caaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagccta 11658377  T

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Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18372470 - 18372544
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaa 75  Q
    ||||| |||| |||||||||||||||  |||||||||||| |||||||||||||||| ||| |||||||||||||    
T  18372470 tcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaattaggggggaaaa 18372544  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31659711 - 31659622
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg--aaaagtgcactttagcc 88  Q
    ||||| |||| |||||||||||||||  |||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||||||||    
T  31659711 tcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

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Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7500542 - 7500454
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||||| ||||  |||||||| ||   |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  7500542 tcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcct 7500454  T

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Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17781749 - 17781663
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 86  Q
    ||||| |||||  ||||||| |||||  |||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||||    
T  17781749 tcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

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Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31949815 - 31949905
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagccta 90  Q
    ||||| ||| || ||||||| |||||  || ||||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  31949815 tcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagccta 31949905  T

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Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47369869 - 47369780
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    |||||||||| ||||||| |||||||  |||||| | |||||||||||||||||||| |||||||||||   ||||||||| ||||||||    
T  47369869 tcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcct 47369780  T

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Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 14999179 - 14999249
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactt 83  Q
    |||||||||||||||  || ||||||||  ||||||||||||||| |||| |||||||||||||||||||||    
T  14999179 caaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa-ttaggggggaaaagtgcactt 14999249  T

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Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  15 aattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcac 81  Q
    |||||| |||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

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Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 128614 - 128699
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttta 85  Q
    ||||| |||||| ||||||| |||||  |||||||||||  |||||||||| ||||| ||||||| || |||||||||||||||||    
T  128614 tcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

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Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  17 ttgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    ||||||||||  ||| ||||| || |||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

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Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21505502 - 21505414
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||| |||| |||||||||||||||  ||  | |||||| ||||| |||| ||||| |||||||||||| |||||||||||||||||||    
T  21505502 tcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagttaggggg-aaaagtgcactttagccta 21505414  T

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Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 11662570 - 11662649
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    |||| ||||||| |||||||  ||| ||| | ||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  11662570 ggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

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Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 42886311 - 42886389
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagccta 90  Q
    ||||||||||||||  || ||||||||  |||||||||| ||||| ||||||||| || ||||||||||||||| ||||    
T  42886311 aaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcactttaaccta 42886389  T

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Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 43900507 - 43900585
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||| ||||||||| ||| ||||||  | |||||| ||| ||||||||||||||  | |||||||||||||||    
T  43900507 gggggcaaaactgtagtttttatatttagggaaccaaaattacaaatttttaaaagttagaagagaaaagtgcacttta 43900585  T

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Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 46483562 - 46483612
Alignment:
Q  42 aaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    |||||| |||||||||||||||||  |||||||||||||||||| ||||||    
T  46483562 aaaattacaagtttttaaaagttaaaggggaaaagtgcactttaacctaat 46483612  T

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Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 48934927 - 48935004
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcc 88  Q
    ||||||| |||||||  ||||||| |||  |||||| ||||||||| ||||||||||| |||||| ||||||||||||    
T  48934927 caaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22629574 - 22629481
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta----ggggggaaaagtgcactttagccta 90  Q
    ||||| |||| |||||||||||||||  |||||||| ||| |||||| ||||||||| ||| |||     ||||||||| ||||||||||||||    
T  22629574 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagccta 22629481  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 14998067 - 14998006
Alignment:
Q  31 cttagggggctaaaattgcaagtttttaaaagttaggggggaaaa--gtgcactttagccta 90  Q
    |||||||||| ||||||| |||||||| |||||||||||  ||||  |||||||||||||||    
T  14998067 cttagggggccaaaattgtaagtttttgaaagttaggggaaaaaaaggtgcactttagccta 14998006  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34351580 - 34351511
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggg 70  Q
    ||||||||||  |||||||||||||  |||||| | | || |||||||||||||||| ||||| ||||||    
T  34351580 tcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttgaaagtcaggggg 34351511  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 42271580 - 42271637
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcct 89  Q
    |||||||| ||||||||||  ||||||||  ||||||| |||||||||||||||||||    
T  42271580 tagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcct 42271637  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 34153064 - 34153036
Alignment:
Q  65 aggggggaaaagtgcactttagcctaata 93  Q
    |||||||||||||||||||||||||||||    
T  34153064 aggggggaaaagtgcactttagcctaata 34153036  T

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Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 23034371 - 23034443
Alignment:
Q  281 gaaggaacatgaaagtgagagtgcagccgaaggttcagaatctagtttggagagactgttgtggtggttgttg 353  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23034371 gaagcaacatgaaagtgagagtgcaaccgaaggttcagaatctagtttggagagactgttgtggtggttgttg 23034443  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24516548 - 24516459
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagcct 89  Q
    |||||||||| ||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  24516548 tcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

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Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 12700255 - 12700172
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||| |||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12700255 ggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagggggg-aaagtgcactttagcctaa 12700172  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7267731 - 7267641
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| ||||||||||||||   |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  7267731 tcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttaacctaa 7267641  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 7268851 - 7268929
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  7268851 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttaaccta 7268929  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29931314 - 29931224
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagccta 90  Q
    ||||| |||| |||||||||||||||  || ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  29931314 tcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagccta 29931224  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29980468 - 29980378
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagccta 90  Q
    ||||| |||| |||||||||||||||  || ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  29980468 tcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagccta 29980378  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 11671371 - 11671444
Alignment:
Q  18 tgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  11671371 tgtagtttttatatttagggggctaaaattgcaagtttttgaaagttaggcggaaaaagtgcactttagcctaa 11671444  T

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Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29932712 - 29932800
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    |||||||||| |||||||||||||||  |||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  29932712 tcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29932800  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29981866 - 29981954
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    |||||||||| |||||||||||||||  |||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  29981866 tcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29981954  T

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Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47614273 - 47614185
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||    
T  47614273 tcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcc 47614185  T

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Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5029696 - 5029786
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| ||||| |||||||| |||||  |||||||| ||| ||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  5029696 tcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctaa 5029786  T

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Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19984937 - 19984847
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagccta 90  Q
    |||||| ||| |||||||||||||||  ||| |||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  19984937 tcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagccta 19984847  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47610593 - 47610683
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagccta 90  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  47610593 tcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaaccta 47610683  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 23034254 - 23034307
Alignment:
Q  164 attaggaacatataacttaattaaatcacatgattaacaacttgctcttgtaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23034254 attaggaacatataacttaattaaatcacatgattaacaacttgttcttgtaat 23034307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 54540803 - 54540892
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||| |||| |||||||||||||||  |||||| ||||  |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  54540803 tcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 7758478 - 7758399
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||  |||||||||||  |||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  7758478 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaa 7758399  T

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Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 28262274 - 28262191
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||||||||||||||||||||||||||||    
T  28262274 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaagtgcactttagccta 28262191  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8456565 - 8456479
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagc 87  Q
    ||||| |||| |||||||||||||||  || ||||||| | |||||||||||||||| ||| |||||||| ||||||||||||||||    
T  8456565 tcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcactttagc 8456479  T

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Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 12703519 - 12703601
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||| |||||||||||||||  |||||||||||| |||||| ||| ||||| |||||||| ||| ||||||||||||||||||    
T  12703519 ggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgcactttagcct 12703601  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22776825 - 22776915
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagccta 90  Q
    ||||| |||| |||||||||||||||  ||| |||||||| |||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  22776825 tcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagccta 22776915  T

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Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 54539832 - 54539754
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    |||||||||||||||  || |||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  54539832 caaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

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Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 46721245 - 46721322
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcct 89  Q
    ||||||||||||||  ||| ||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  46721245 aaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 47615591 - 47615652
Alignment:
Q  31 cttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaa 47615652  T

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Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 28263130 - 28263214
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagccta 90  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||||||||||| |||||||||||||||||||||||||    
T  28263130 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagccta 28263214  T

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Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 46720017 - 46719941
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    |||||||||||||| |||| |||||||| ||||| |||| |||||||||||| ||||||||||| ||||||||||||    
T  46720017 aaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

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Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51470060 - 51469972
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagcc 88  Q
    ||||| |||||  ||||||| |||||  |||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  51470060 tcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

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Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 51470468 - 51470560
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaata 93  Q
    ||||| ||| || ||||||| |||||  ||||||||||    ||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  51470468 tcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagttaggggggaagagtgcactttagcctaata 51470560  T

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Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 52840617 - 52840705
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||| ||||| ||| |||||| || |||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  52840617 tcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagcc 52840705  T

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Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 55192008 - 55192096
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||| ||||| |||||||||||||||  ||||||| |||| |||||||||||||||| ||||||| ||||| ||| | |||||||||||    
T  55192008 tcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaatacactttagcct 55192096  T

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Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47609785 - 47609694
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcctaa 91  Q
    ||||| |||||  ||||||| |||||  |||||||||||  |||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  47609785 tcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcctaa 47609694  T

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Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 51038803 - 51038893
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    |||||||||  |||||||||||||||  | | |||||||  |||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  51038803 tcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagccta 51038893  T

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Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 5001275 - 5001198
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagccta 90  Q
    ||||||| |||||  |||||||||||| ||||||||||| |||| |||| |||||| |||||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagccta 5001198  T

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Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 534587 - 534495
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaat 92  Q
    ||||| |||| |||||||||||||||  ||| |||| ||  |||||||||||||||| | |||||| |||| |||||||||||||||||||||    
T  534587 tcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcctaat 534495  T

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Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 535807 - 535883
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcc 88  Q
    |||||| ||||||| ||||||| ||| | |||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  535807 aaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

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Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 19986094 - 19986175
Alignment:
Q  12 caaaattgtagttttcatacttagg--gggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagccta 90  Q
    ||||||||||||||| |||| ||||  |||| |||||||||||||||| ||| ||| | |||||||||||||||||||||||    
T  19986094 caaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagccta 19986175  T

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Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 52281566 - 52281652
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcctaat 92  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| |||| |||||| |||||||||||||||||||||||    
T  52281566 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcctaat 52281652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 18442713 - 18442629
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg--ggggaaaagtgcactttagcct 89  Q
    |||| |||||||||||||||||||| | |||||| ||||| ||||  |||| |||||||||  |||| |||||||||||||||||    
T  18442713 ggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcct 18442629  T

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Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 19487787 - 19487703
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg--ggggaaaagtgcactttagcct 89  Q
    |||| |||||||||||||||||||| | |||||| ||||| ||||  |||| |||||||||  |||| |||||||||||||||||    
T  19487787 ggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagcct 19487703  T

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Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 53614901 - 53614816
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||| ||||||||||||||| |||  ||| || ||||||||| |||||||| |||||| |||| |||||| |||||||||||||||    
T  53614901 ggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcctaa 53614816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 18456082 - 18456165
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttagcc 88  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| |||||||  |||||||||||||||||||||||    
T  18456082 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagcc 18456165  T

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Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 49216335 - 49216247
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    |||||||||| || ||||||||||||  ||| |||||||  |||||||||| ||||| ||| ||||| | |||||||||||||||||||    
T  49216335 tcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

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Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 52276386 - 52276302
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagccta 90  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| |||| |||||||| |||||||||||||||||||    
T  52276386 ggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagccta 52276302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8875994 - 8875903
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  ||| || |||||||||||||||  |||||  || || ||||| |||||||||||||||||||||    
T  8875994 tcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcctaa 8875903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 22775829 - 22775783
Alignment:
Q  35 gggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcac 81  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||    
T  22775829 gggggccaaaattgcaactttttgaaagttaggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 34940211 - 34940284
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||| |||| |||| || | |  ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  34940211 caaaattgtaatttttatacataagagattaaaattgcaagtttttaaaaattagagggaaaaagtgcacttta 34940284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 54987031 - 54987103
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    ||||||| ||||||| |||| |||||| ||||||| |||| ||||| ||| ||||||| |||||||||||||||    
T  54987031 caaaattatagtttttatacataggggactaaaatcgcaactttttgaaacttagggg-gaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 11670461 - 11670398
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaa 75  Q
    ||||||| ||||||| ||||||||||| |||||||||||| ||||| ||| ||| | |||||||    
T  11670461 caaaattatagtttttatacttaggggactaaaattgcaaatttttgaaaattaagcgggaaaa 11670398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 51037611 - 51037536
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||||||||||||  | | ||| |||  |||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  51037611 aaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaagggagaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 53901407 - 53901487
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    |||| ||| |||||||||||  |||||| || |  |||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  53901407 ggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaacttagggg-gaaaagtgcactttagcc 53901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 6249685 - 6249633
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta 65  Q
    ||||||||||||||  |||||| |||  ||||||||||||||||| |||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 27852809 - 27852753
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcc 88  Q
    |||||||||||||||||||  |||| |||  ||||||| ||||||||||||||||||    
T  27852809 tagggggctaaaattgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27852753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 39844245 - 39844301
Alignment:
Q  36 ggggctaaaattgcaagtttttaaaagttaggggggaaaa-gtgcactttagcctaa 91  Q
    |||| ||||||||||| ||||||||| ||| ||||||||| |||||||||| |||||    
T  39844245 ggggttaaaattgcaactttttaaaacttaagggggaaaaggtgcactttaacctaa 39844301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25523157 - 25523066
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  25523157 tcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaa 25523066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 19752993 - 19752911
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||| |||||||||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  19752993 ggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcct 19752911  T

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Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33160299 - 33160389
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  33160299 tcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagccta 33160389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5778849 - 5778939
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagccta 90  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5778849 tcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 5778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 16650880 - 16650958
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  16650880 aaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20214283 - 20214191
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaata 93  Q
    |||| ||||| |||||||||||||||  ||| ||| | ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  20214283 tcttgaggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagccaaata 20214191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25056394 - 25056482
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||| | |||||||||||||||||||    
T  25056394 tcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

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Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 22940640 - 22940723
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    ||||| |||||||||| ||||  |||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  22940640 aggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

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Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5777987 - 5777898
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||||| ||||||| |||||  |||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5777987 tcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggg-aaagtgcactttagcctaa 5777898  T

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Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 18485215 - 18485137
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  18485215 caaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcct 18485137  T

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Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18486915 - 18487005
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||| ||||  ||||||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  18486915 tcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagccta 18487005  T

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Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 36486512 - 36486590
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagcct 89  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36486512 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 36486590  T

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Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 28539844 - 28539917
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||||||||  ||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||    
T  28539844 caaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaggggggaaaaatgcacttta 28539917  T

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Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 19754149 - 19754234
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg--aaaagtgcactttagccta 90  Q
    |||| |||||||||||||||  || ||||||||| |||||||||||||||| |||||||||||||  |||| ||||||||||||||    
T  19754149 ggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagccta 19754234  T

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Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 25524151 - 25524231
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttagccta 90  Q
    |||||||||||||||  |||||||||||| |||||| ||| ||||||||| |||  |||||||||||||||||||||||||    
T  25524151 caaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagccta 25524231  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33158186 - 33158097
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcct 89  Q
    |||||||||| |||||||||||||||  ||||||||| |  |||||||||||||||| ||||||||||||  |||| |||||||||||||    
T  33158186 tcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

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Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 28538752 - 28538673
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||  |||||| ||||  |||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  28538752 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcctaa 28538673  T

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Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40255685 - 40255775
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||   || ||||||||  |||||||||||||||||||| || || |||||||||||||||||||||||    
T  40255685 tcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagccta 40255775  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 1796131 - 1796054
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcc 88  Q
    |||||||||||||||  |||||||| ||| ||| |||||||||||| ||||||||||| |||||| ||||||||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 5730523 - 5730439
Alignment:
Q  8 ggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttagccta 90  Q
    ||||| ||||||| |||||  ||||||||  || |||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  5730523 ggggctaaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 20216782 - 20216867
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||| |||||||||||||||  ||  ||||| ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||    
T  20216782 ggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaacctaa 20216867  T

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Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25055500 - 25055410
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||| |||| ||||||   |||||||||||   || |||||||| ||||||||||||||||||||||||    
T  25055500 tcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagccta 25055410  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 18154573 - 18154492
Alignment:
Q  9 gggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||||||||||||||||  |||||||||| | ||||||| |||||||| |||||| |||||  |||||| ||||||||||||    
T  18154573 gggcaaaattgtagtttttgtacttaggggtc-aaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagccta 18154492  T

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Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 24332990 - 24332916
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    |||||||||||||||  ||| || ||||| |||||||||||||||| ||| || |||||| ||||||||||||||    
T  24332990 caaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 42195209 - 42195137
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    ||||||||||| |||  ||| |||||||| ||||| |||| |||||||| |||| |||||||||||||||||||    
T  42195209 caaaattgtagattttgtacatagggggccaaaatcgcaactttttaaa-gttaagggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21835128 - 21835040
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||| |||| |||||||||||||||  ||| |||||||  |||||  ||| ||||| ||| |||| |||| |||||||||||||||||    
T  21835128 tcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagagggggaaagtgcactttagcct 21835040  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 5961492 - 5961438
Alignment:
Q  32 ttagggggctaaaattgcaagtttttaaaagttaggggggaaaa-gtgcacttta 85  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||| ||||||||||    
T  5961492 ttagggggctaaaattgcaaatttttgaaaattaggggagaaaaggtgcacttta 5961438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 7311666 - 7311608
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg 71  Q
    ||||||||||||||  ||||| || ||| || ||||||||||||| |||||||||||||    
T  7311666 aaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttagggggg 7311608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36485388 - 36485302
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 86  Q
    ||||| |||| ||||||| |||||||  |||||| | ||  ||||||| |||||||| ||||||||||| |||||| ||||||||||    
T  36485388 tcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 1015560 - 1015483
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    |||||||||| |||  |||  ||||||| ||||||| || ||||||||||||||||| ||||||||||| ||| ||||    
T  1015560 aaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgcatttttgcct 1015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 34893739 - 34893686
Alignment:
Q  15 aattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg 68  Q
    ||||||||||||  ||| ||||| || |||||||||||||||| ||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggg 34893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 2373200 - 2373144
Alignment:
Q  36 ggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaa 91  Q
    ||||||||||| |||| ||||||||| ||| |||| |||||||||||||||| ||||    
T  2373200 ggggctaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagtctaa 2373144  T

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Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36449860 - 36449776
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36449860 gggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 36449776  T

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Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 38840518 - 38840596
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  38840518 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 38840596  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 18906012 - 18906091
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  18906012 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcctaa 18906091  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 18797329 - 18797244
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg--ggaaaagtgcactttagccta 90  Q
    |||| ||||||||||||||| ||||||| ||||  |||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  18797329 ggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagccta 18797244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 18904444 - 18904363
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaat 92  Q
    |||||||||||||||  |||||| ||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  18904444 caaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagcctaat 18904363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 7899907 - 7899986
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||||||||||||   |||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7899907 aaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaa 7899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 23869560 - 23869639
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    ||||||||||||||  || ||||||||| |||||||||||||||||||  | |||| |||||||||||||||||||||||    
T  23869560 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttaaagttaagggtggaaaagtgcactttagcctaat 23869639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38839330 - 38839239
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  || |||||||||||||||||||||||||| |||| | |||||| |||| |||||||||||||||    
T  38839330 tcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcctaa 38839239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7898779 - 7898689
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||  ||||||||| ||| |||||||||||||||| |||||| ||||| ||||||||||||||| ||||    
T  7898779 tcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaaccta 7898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 18299455 - 18299373
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcc 88  Q
    |||| ||||||||||||||| ||||||||| ||| ||||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  18299455 ggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagcc 18299373  T

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Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 18869001 - 18868919
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcctaata 93  Q
    |||||||||||||||  || ||||| ||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcctaata 18868919  T

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Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 22848268 - 22848190
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagcct 89  Q
    |||||||||||||||  || ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  22848268 caaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 22848190  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 24475306 - 24475224
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||| ||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||| |  ||| ||||||||||||    
T  24475306 ggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagttaggggagggaagcgcactttagcct 24475224  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 802615 - 802692
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||||||||||||||  |||  ||||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  802615 caaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacactttagcct 802692  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 36450947 - 36451024
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||   |||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  36450947 aaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttaacctaa 36451024  T

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Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1034482 - 1034570
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcc 88  Q
    ||||| |||||| ||||||| |||||  ||| |||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  1034482 tcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

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Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41878182 - 41878092
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgca---agtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    |||||||||| ||||||||||||||   |||||||||||| |||||||||   ||||||| ||||||| ||||| ||||||||||||||||    
T  41878182 tcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggggggaaagtgcactttagcc 41878092  T

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Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 1033263 - 1033212
Alignment:
Q  36 ggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagc 87  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1033263 ggggccaaaattgcaagtttttaaaagttaggggggaaaagtacactttagc 1033212  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11938802 - 11938892
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcctaa 91  Q
    ||||| |||||||||||| || ||||  |||||||| | | |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  11938802 tcttaggggggcaaaattatatttttg-tacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctaa 11938892  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 24476861 - 24476943
Alignment:
Q  5 aagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    |||||| |||||||||||||||  |||||||||| | |||||| |||||||||||||||| ||||| ||||||||||| |||||    
T  24476861 aaggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt-gggggaaaaagtgcactctagcc 24476943  T

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Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 11258836 - 11258913
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    ||||||||||||||  |||||||||||| |||||||||||||||| |||||||| | ||| ||| |||||||||||||    
T  11258836 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcactttagcct 11258913  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 18300742 - 18300822
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagc 87  Q
    ||||| |||||||||||||||  |||||||||||  |||||||||||||| | ||||||| |||||||||||||| ||||||    
T  18300742 aggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta-gggggaaaagtgcaatttagc 18300822  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22587967 - 22588055
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    |||||||||| |||||||||||||||  ||| || ||||| |||||||||||||||| ||||||| | |||||||| |||||||||||||    
T  22587967 tcttaaggggccaaaattgtagtttttgtacata-ggggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcct 22588055  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 41879237 - 41879317
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagcctaat 92  Q
    |||||||||||||   |||||||||||| |||||||||||||||| |||| | |||||| ||||||| |||||||||||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcctaat 41879317  T

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Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 11257698 - 11257621
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||| |||||||| || | ||||||||||||||||||    
T  11257698 caaaattgtagtttttatacttagggtt-taaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcct 11257621  T

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Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 21837298 - 21837355
Alignment:
Q  31 cttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta-ggggaaaaagtgcactttagcct 21837355  T

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Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 28618005 - 28617926
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||||||| ||||||  ||||| |||||| ||||||||||| |||| |||||||||| | |||| || ||||||    
T  28618005 agggggcaaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagttagggagaaaaaatgtacttta 28617926  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 13030365 - 13030293
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagc 87  Q
    ||||||||| ||||  |||||||||| | |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  13030365 aaaattgtaatttttgtacttaggggcc-aaaattacaagtttttgaaagttag-ggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 13568049 - 13567975
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcacttta 85  Q
    |||||||||||||||  || ||||||||| |||||||||||||||| ||| ||||  |||||||||| |||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 13570581 - 13570659
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    ||||||| |||||||  |||||| ||| |||||||||||||||||| ||||||| |||  ||||| |||||||||||||    
T  13570581 caaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 32739705 - 32739643
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg 69  Q
    |||| |||||||||||||||  ||| || ||||| |||||||||||||||| |||||||||||    
T  32739705 ggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttagggg 32739643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 16446231 - 16446151
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||||||||||||||  || ||| | || ||||||||||||||||| |||||| ||||  ||||| |||||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcctaa 16446151  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 13830322 - 13830270
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||  ||||| |||| ||||| ||| |||||||||||||||||||||||    
T  13830322 tagggggtcaaaatcgcaactttttcaaacttaggggggaaaagtgcacttta 13830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 21837121 - 21837070
Alignment:
Q  36 ggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||| |||||||||||||||| ||||||| | || |||||||||||||||||    
T  21837121 ggggccaaaattgcaagtttttgaaagtta-gaggaaaaagtgcactttagcc 21837070  T

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Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 5514063 - 5513980
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  5514063 gggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagttagggggtaaaagtgcactttagccta 5513980  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22221377 - 22221466
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22221377 tcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22221466  T

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Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22227719 - 22227808
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22227719 tcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22227808  T

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Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10006432 - 10006344
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  10006432 tcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 10006344  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 29968364 - 29968434
Alignment:
Q  15 aattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  29968364 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8388550 - 8388463
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||| |||||||  ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  8388550 tcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagttagggggg-aaagtgcactttagcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12353374 - 12353461
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||| |||||||  |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  12353374 tcttagggggccaaaattatagttttg-tacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcct 12353461  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 18979136 - 18979220
Alignment:
Q  4 taagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagc 87  Q
    ||||||| ||||||||||||||| ||| ||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||    
T  18979136 taaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

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Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 10007787 - 10007866
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||||||| ||||  ||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  10007787 caaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 10007866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18978107 - 18978029
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgc 79  Q
    |||||||||| |||||||||||||||  |||||||||||| ||||||| ||| |||| |||||||||||||||||||||    
T  18978107 tcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22220476 - 22220388
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||||||||| |||| |||||||  |||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  22220476 tcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18970998 - 18970920
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgc 79  Q
    |||| ||||| |||||||||||||||  |||||||||||| ||||||| ||| |||| |||||||||||||||||||||    
T  18970998 tcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18970920  T

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Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 24122958 - 24122880
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||||| |||||||  |||||||||||  |||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  24122958 aaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagttaggggggaaaaatgcactttagcctaa 24122880  T

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Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 5514294 - 5514375
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaata 93  Q
    |||||||||||||||  || ||||  |||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgcactttagcctaata 5514375  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 30336526 - 30336602
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaa-aagtgcactttagcc 88  Q
    ||||||||||||||  |||||||| ||||||||||  |||||||| ||||||||||||||| |||||||||||||||    
T  30336526 aaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

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Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32207338 - 32207425
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||||| || |||||||||||||||  ||||||||| |  |||||||||||||||| || |||||||||| |||||||||||||||||    
T  32207338 tcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggttagggggg-aaagtgcactttagcct 32207425  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1824091 - 1824174
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactt 83  Q
    ||||| |||| |||||||||||||||  |||||||||| | |||||||||||||||| |||||||| ||||||||| |||||||    
T  1824091 tcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1858536 - 1858619
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactt 83  Q
    ||||| |||| |||||||||||||||  |||||||||| | |||||||||||||||| |||||||| ||||||||| |||||||    
T  1858536 tcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 24488699 - 24488762
Alignment:
Q  8 ggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg 71  Q
    ||||||||||||| ||||| ||| ||||||||| |||||||||||||||| |||||||||||||    
T  24488699 ggggcaaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttagggggg 24488762  T

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Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11287864 - 11287779
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcacttta 85  Q
    ||||| |||| ||||||||||||||   ||||||| |||| |||||||||||||||| ||||||||||| | ||||||||||||||    
T  11287864 tcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

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Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12352009 - 12351920
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||| |||| |||||||||||||||  |||||||||||  |||||||||| ||||| |||||| ||||||| ||| |||||||||||||    
T  12352009 tcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcct 12351920  T

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Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 32968533 - 32968452
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcctaat 92  Q
    ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||||| |||||||||||||||||||||||||    
T  32968533 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctaat 32968452  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 1823627 - 1823551
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    |||||||||||||  ||||||| |||  ||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  1823627 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1823551  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 1858072 - 1857996
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    |||||||||||||  ||||||| |||  ||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  1858072 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1857996  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 38980063 - 38980146
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||| ||||||||||||||||||||||||    
T  38980063 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 38980146  T

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Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 39011160 - 39011243
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||| ||||||||||||||||||||||||    
T  39011160 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 39011243  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 24483200 - 24483138
Alignment:
Q  32 ttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcctaata 93  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagccaaata 24483138  T

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Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 38974877 - 38974795
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||||| |||||||||||||||||||||    
T  38974877 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38974795  T

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Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 39005975 - 39005893
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||||| |||||||||||||||||||||    
T  39005975 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39005893  T

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Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 30335715 - 30335638
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||||||| ||||  ||||||| | || ||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  30335715 aaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcct 30335638  T

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Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 32973960 - 32974037
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagcc 88  Q
    ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||||||||| |||||||||||||||||    
T  32973960 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagcc 32974037  T

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Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 5003115 - 5003198
Alignment:
Q  6 agggggcaaaattgtagttttca-tacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||| ||||||||| ||||| | ||||||||||  |||||||||||| |||| ||||||||||||| ||||||| |||||||||    
T  5003115 aggggacaaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagttagggggg-aaagtgcgctttagcct 5003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 11456694 - 11456635
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaa 91  Q
    |||||||| |||||||||| ||||| ||| |||||||| |||||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcctaa 11456635  T

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Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 11282064 - 11282006
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    |||||||| |||||||||| |||||||||||| |||||| |||||||||||||| ||||    
T  11282064 tagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 11283233 - 11283310
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    |||||||||  |||| |||| ||||||||||||||| ||| ||||| |||||| ||||||| ||| ||||||||||||    
T  11283233 caaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

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Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 11288914 - 11288963
Alignment:
Q  42 aaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagccta 90  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagccta 11288963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 45114570 - 45114618
Alignment:
Q  42 aaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  45114570 aaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2379937 - 2380025
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    |||||||||| ||||||||||| |||| ||| || ||||| |||||| ||| ||||| ||||||| |||||||||||  |||||||||||||    
T  2379937 tcttaaggggccaaaattgtag-tttcgtacata-ggggccaaaattacaactttttgaaagtta-gggggaaaagtaaactttagcctaat 2380025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 23170040 - 23170098
Alignment:
Q  29 tacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||||||||   |||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  23170040 tacttaggggatcaaaattgcaagtttttgaaaattaggggggaaaa-tgcactttagcc 23170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 24123923 - 24123999
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||||| ||||  |||||| | ||| |||||||||||||||| ||||||| |||||  ||||| ||||||||||||    
T  24123923 aaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg--aagtgtactttagcctaa 24123999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 4518925 - 4518864
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaata 93  Q
    |||||||| ||||| ||||  ||||||||  ||||||| |||||||||||||||||||||||    
T  4518925 tagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcctaata 4518864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43661836 - 43661925
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||| |||||||  ||| ||| ||  ||||||||||| ||||| |||||| |||| |||||||||||||| |||||    
T  43661836 tcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 36249608 - 36249552
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcc 88  Q
    |||| ||| |||||||||| ||||| ||| ||| |||||||||||||||||||||||    
T  36249608 taggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

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Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 10784675 - 10784590
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttagccta 90  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  10784675 ggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagccta 10784590  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8659353 - 8659262
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8659353 tcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 8659262  T

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Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8821961 - 8821870
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8821961 tcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 8821870  T

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Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7316307 - 7316397
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    |||||||||| ||||||||| ||||  ||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  7316307 tcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 7316397  T

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Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1829616 - 1829701
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcacttta 85  Q
    ||||| |||| ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||    
T  1829616 tcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

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Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27322081 - 27322170
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||| ||||| |||||||| |||||  |||||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  27322081 tcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccta 27322170  T

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Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10785926 - 10786000
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaa 75  Q
    ||||||||||  ||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  10785926 tcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagttaggggggaaaa 10786000  T

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Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7314967 - 7314880
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||| ||||| ||||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  7314967 tcttagggggtcaaaattgttgttttgatacttaggggcc-aaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7314880  T

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Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 16704521 - 16704601
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||||||||||||||  |||||||||||  |||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  16704521 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcctaa 16704601  T

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Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3721700 - 3721611
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    |||||||||| | ||||| | |||||  |||||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  3721700 tcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 3721611  T

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Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8660217 - 8660305
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcct 89  Q
    ||||| |||||| ||||||| |||||  |||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  8660217 tcttaggggggctaaattgtggttttggtacttaggggtc-aaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcct 8660305  T

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Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 3722527 - 3722611
Alignment:
Q  8 ggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagcctaa 91  Q
    ||||| ||||||| |||||  ||||||| |||  |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3722527 ggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcctaa 3722611  T

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Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14823588 - 14823679
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg--aaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||   |||||| |||||||||||||||||||||| ||| ||| |||||  |||||||||||||||||||    
T  14823588 tcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagccta 14823679  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14822448 - 14822357
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| ||||||||||||||  ||||||| ||||| |||||||||||||||| |||| | ||||| |||||||||||| ||||||||    
T  14822448 tcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcctaa 14822357  T

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Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27437916 - 27437826
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||| ||   |||||||| |||||||||| ||||| |||||| ||||| ||||||||||||||||||||    
T  27437916 tcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagccta 27437826  T

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Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34834592 - 34834682
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagccta 90  Q
    ||||| |||||| ||||||| ||||| ||||||||| |   |||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  34834592 tcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttaaccta 34834682  T

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Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8822806 - 8822894
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    ||||| |||||| ||||||| |||||  |||||||||||  |||||||||||||||| |||||| | | ||||||||||||||||||||    
T  8822806 tcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26575067 - 26575150
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    ||||| |||| |||||||||||||||  |||||| |||| ||||||||||||||||| |||||||| | || |||||||||||||    
T  26575067 tcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagttagagagg-aaagtgcacttta 26575150  T

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Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 27318389 - 27318313
Alignment:
Q  14 aaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||||| |||||  |||||||||||| ||||||||||| |||| |||| ||||||| ||| |||||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggaaaaggtgcactttagccta 27318313  T

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Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 6842308 - 6842387
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||   || |||||||| |||||||||| ||||| ||| |||| |||||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcctaa 6842387  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 12382735 - 12382811
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagc 87  Q
    ||||||| ||||||| ||||||||||||  |||||| ||| ||||||||| |||| || ||||||||||||||||||    
T  12382735 caaaattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 17496879 - 17496790
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-----gggggaaaagtgcactttagcctaa 91  Q
    |||| |||||||| ||||||  ||||||| ||| |||||||| |||||||| ||||||||     ||||||||| |||||||||||||||    
T  17496879 ggggccaaaattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagttagggggagggggaaaaatgcactttagcctaa 17496790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 16703615 - 16703565
Alignment:
Q  42 aaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaata 93  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  16703615 aaaattgcaagtttttgaaagataggggg-aaaagtgcactttagccaaata 16703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 27447962 - 27448016
Alignment:
Q  37 gggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagccta 90  Q
    |||| ||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  27447962 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagccta 27448016  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 3333051 - 3333128
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    ||||||||||||||  ||| |||||||| ||||| |||| ||||| ||| ||||  ||||||||||||| ||||||||    
T  3333051 aaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcct 3333128  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5658844 - 5658759
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    |||||||||  |||||||||||||||  ||| |||||  ||||||||  || ||||||||| || ||||||||||| |||||||||    
T  5658844 tcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 14572424 - 14572484
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaat 92  Q
    |||||||| ||||||||||  |||||||| |||| ||| |||||||| |||||||||||||    
T  14572424 tagggggccaaaattgcaatattttaaaacttagagggcgaaaagtggactttagcctaat 14572484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 16415587 - 16415639
Alignment:
Q  42 aaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaata 93  Q
    ||||| |||| ||||||||| ||| |||| |||||||||||||||||||||||    
T  16415587 aaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagcctaata 16415639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 17552 - 17467
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  17552 ggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcctaa 17467  T

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Target: scaffold0302; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 18791 - 18877
Alignment:
Q  3 ttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcc 88  Q
    |||||||| ||||||| |||||||  ||| |||||| | |||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  18791 ttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

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Target: scaffold0294 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5451 - 5544
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcctaata 93  Q
    ||||||||||||||||||||||||||  |||||| ||||  |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  5451 tcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcctaata 5544  T

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Target: scaffold0294; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 4524 - 4440
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaa-gtgcactttagccta 90  Q
    ||||| ||||||||| ||||  |||||| ||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||    
T  4524 gggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagccta 4440  T

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Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 45149990 - 45150074
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    |||||||||||||| |||||  |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  45149990 gggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttaacctaa 45150074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51684454 - 51684366
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||||||||| |||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  51684454 tcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

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Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 14999361 - 14999283
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||||||||||||  |||||||||||  |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttagccta 14999283  T

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Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 35594299 - 35594216
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcct 89  Q
    ||||| ||||||||||||||| ||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  35594299 aggggtcaaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36613917 - 36614005
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagcc 88  Q
    ||||| |||| |||||||||||||||  |||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  36613917 tcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 41366148 - 41366232
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcct 89  Q
    ||||||| ||||||| ||||| ||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  41366148 agggggctaaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcct 41366232  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 45157222 - 45157310
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||||| ||| |||||||||||||||  ||| |||||||| |||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  45157222 tcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaagtgcactttagcct 45157310  T

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Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24422888 - 24422797
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  |||||||||||  |||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  24422888 tcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcctaa 24422797  T

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Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39699780 - 39699867
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||| |||| ||||||||||||||   |||||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||    
T  39699780 tcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagttaggggggaaaagtgcactttagcc 39699867  T

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Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41364916 - 41364829
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||| |||||| ||||||| |||||  || ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  41364916 tcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagcc 41364829  T

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Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 7674603 - 7674526
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||||||||||||  |||||||||  | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7674603 caaaattgtagtttttgtacttagggccc-aaaattgcaagtttttaaaagttaggggggaaaagggcactttagccta 7674526  T

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Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 23980490 - 23980572
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaata 93  Q
    ||||||| |||||||  ||||||||| || |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  23980490 caaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagcctaata 23980572  T

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Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 52275045 - 52274967
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttagcct 89  Q
    |||||||||||||||  |||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  52275045 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7983137 - 7983048
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||| |||||||||||||| ||||| |||| |||||||| ||||||||||||| || ||||||| ||| ||||||||||||||| ||||    
T  7983137 tcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagttacgggagaaaagtgcactttaaccta 7983048  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45148668 - 45148581
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcc 88  Q
    ||||| ||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||| || ||| |||||||||||||||||    
T  45148668 tcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcc 45148581  T

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Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11437212 - 11437303
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  |||||| ||| | |||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  11437212 tcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaa 11437303  T

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Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 39222501 - 39222575
Alignment:
Q  16 attgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt--aggggggaaaagtgcactttagcc 88  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||  |||||| |||||||||||||||||    
T  39222501 attgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

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Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11436130 - 11436041
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||| |||| ||||||||||||||| |||||||   ||| |||||||||||||||| |||||| | |||||||||||||||||||||||    
T  11436130 tcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcct 11436041  T

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Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 24426100 - 24426173
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcacttta 85  Q
    ||||||||||||||  |||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||    
T  24426100 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 43058861 - 43058784
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||||||||||||  |||||||||||  |||||||||||||||| |||||||||||| ||||||| |||||| ||||    
T  43058861 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagttagggggaaaaagtgtactttaaccta 43058784  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 50680407 - 50680330
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||  |||||| ||||||||| ||||||||| ||||    
T  50680407 aaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaagggggaaaaatgcactttaaccta 50680330  T

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Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52827435 - 52827346
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttagcct 89  Q
    ||||| |||||  ||||||| |||||  |||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  52827435 tcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcct 52827346  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 51685778 - 51685869
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  ||| ||| |||| ||||| |||| ||||| |||||||| |||||||||||||||||||||||||    
T  51685778 tcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcctaa 51685869  T

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Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 52828083 - 52828174
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||| |||||| ||||||| |||||  ||||||||| || |||||||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  52828083 tcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaacctaa 52828174  T

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Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 39698640 - 39698562
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcct 89  Q
    ||||||| ||||||   |||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  39698640 caaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

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Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43060019 - 43060110
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    |||||||||| |||||||||||||||  |||||| ||||  |||||| ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  43060019 tcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcctaa 43060110  T

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Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 44404524 - 44404441
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    |||| ||||||| |||||||  ||||||||||||||||||||| ||||||| ||||||| | ||| ||||||||| ||||||||    
T  44404524 ggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcct 44404441  T

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Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33088630 - 33088719
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcct 89  Q
    ||||| || |||||||||||||||||  ||||||  |||  |||||||||||||||| || ||||| | |||||||||||||||||||||    
T  33088630 tcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcct 33088719  T

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Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35067021 - 35067105
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagccta 90  Q
    |||| |||||||||||||||  | | |||||||| ||||| |||| ||||| ||| ||| |||||||||||||||||||||||||    
T  35067021 ggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagccta 35067105  T

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Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 35595209 - 35595297
Alignment:
Q  6 agggggcaaaattgt-agttttcatacttagggggctaaaattgc-aagtttttaaaagttag-gggggaaaagtgcactttagcctaa 91  Q
    ||||| ||||||||| |||||| |||| |||||||  |||||||| |||||||| |||||||| ||||||||||| |||||||||||||    
T  35595209 aggggccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcctaa 35595297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 37526895 - 37526975
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    ||||| ||||||||| ||||  ||| |||||| || |||||||||||||||| |||||| ||||||||||||| |||||||    
T  37526895 aggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 14999983 - 15000057
Alignment:
Q  16 attgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagcct 89  Q
    ||||||| |||  ||||||||||   ||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcct 15000057  T

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Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 39153140 - 39153214
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 85  Q
    |||||||||||||||  ||| || ||||| |||||||||||||||| ||| || |||||| ||||||||||||||    
T  39153140 caaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44411979 - 44412032
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtt 54  Q
    |||||| |||| ||||||||||||||  |||||||||| |||||||||||||||    
T  44411979 tcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 50681632 - 50681705
Alignment:
Q  16 attgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||||||||| ||| |||| | || |||||||||||||||| |||| | || |||||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 11190432 - 11190380
Alignment:
Q  42 aaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaata 93  Q
    |||||||||| ||||||||| ||| |||| |||||||||||||||||||||||    
T  11190432 aaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcctaata 11190380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 16972098 - 16972158
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttagcctaat 92  Q
    |||||||||||||| ||||  |||||||| |||||||| |||||||||| |||||||||||    
T  16972098 tagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcctaat 16972158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 39152008 - 39151928
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    |||||||||||||||  ||| |||||||| |||||| ||||||||| ||| || |||||| |||| ||||||||| |||||    
T  39152008 caaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcactttaacctaa 39151928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 46066599 - 46066525
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    ||||||||||||||  ||| || ||||||||||| |||| ||||| ||||||| || |||||||||||||| ||||    
T  46066599 aaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta-ggaggaaaagtgcacttaagcc 46066525  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7675472 - 7675561
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||| || ||||  |||||||| ||  |||||||||||||||| |||||||  || | ||||| ||||||||||||    
T  7675472 tcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaagtacactttagccta 7675561  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 39221405 - 39221357
Alignment:
Q  43 aaattgcaagtttttaaaagttag--gggggaaaagtgcactttagcct 89  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcct 39221357  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 43378737 - 43378810
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 85  Q
    |||||||||| ||||  ||||||||||   ||||||| |||||||| ||||||| | | |||||||||||||||    
T  43378737 caaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagagagaaaagtgcacttta 43378810  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 16290170 - 16290091
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag--gggggaaaagtgcactttagccta 90  Q
    |||||||||||||| |||| || ||| | |||||||||| ||||| || |||||  |||| |||| ||||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagccta 16290091  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 21945763 - 21945707
Alignment:
Q  33 tagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    |||| ||| |||||||||| ||||||||| |||  |||||||||| |||||||||||    
T  21945763 taggaggccaaaattgcaactttttaaaacttaaaggggaaaagtacactttagcct 21945707  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 36612900 - 36612852
Alignment:
Q  42 aaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcct 89  Q
    |||||||||| ||||| ||||||| |||||||||| |||||||||||||    
T  36612900 aaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcct 36612852  T

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Target: scaffold0019 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 60172 - 60090
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagcc 88  Q
    |||| ||||||||||||||| |||| |||||||  ||||||||||||||||||||||||| || |||||||||||||||||||    
T  60172 ggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagcc 60090  T

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Target: scaffold0019; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 61478 - 61559
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttagc 87  Q
    |||| ||||||| |||||||  ||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||    
T  61478 ggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

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Target: scaffold0045 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 49109 - 49190
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaata 93  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagccaaata 49190  T

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Target: scaffold0320 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 19565 - 19485
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaa-gtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||| |||| | ||||||||||| |||||||||||||||    
T  19565 caaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcctaa 19485  T

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Target: scaffold1303 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1527 - 1437
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||| ||||||| |||| |||||||  |||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  1527 tcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagccta 1437  T

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Target: scaffold0059 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 4754 - 4834
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaat 92  Q
    ||||||||||||||   || ||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  4754 caaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagttagggagggaaagtgcactttagcttaat 4834  T

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Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 3735 - 3695
Alignment:
Q  29 tacttagggggctaaaattgcaagtttttaaaagttagggg 69  Q
    |||| ||||||| |||||||||||||||| |||||||||||    
T  3735 tactcagggggccaaaattgcaagtttttgaaagttagggg 3695  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 49446 - 49536
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagccta 90  Q
    ||||| |||| ||||||||||||||| ||   |||||||| |||||||||| ||||| |||||| ||||| ||||||||||||||||||||    
T  49446 tcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagccta 49536  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 39396 - 39342
Alignment:
Q  37 gggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagccta 90  Q
    |||| ||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  39396 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagccta 39342  T

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Target: scaffold0632 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 3332 - 3411
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcctaa 91  Q
    ||||||| |||||||  ||| || ||||  ||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  3332 caaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaagtaaggggggaaaagtgcactttagcctaa 3411  T

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Target: scaffold0227 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 138 - 220
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcc 88  Q
    |||| ||||||||| |||||||||| | |||||| ||||| ||||  |||| ||||||| |||||||||||||||||||||||    
T  138 ggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

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Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23166 - 23081
Alignment:
Q  2 cttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    |||| ||| |||| ||||| |||||  ||||||| |||  |||||||||||||||| |||||||| |||||||||||||||||||||    
T  23166 cttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 23081  T

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Target: scaffold0186; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 23908 - 23994
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttagcctaa 91  Q
    |||||| ||| |||| ||||| ||| |||||| || |||||||||||||||| |||||||||| |  ||||||||||||||||||||    
T  23908 agggggaaaagttgttgttttgatatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagcctaa 23994  T

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Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6431 - 6340
Alignment:
Q  1 tcttaagggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttagcctaa 91  Q
    ||||| |||| |||||||||||||||  ||| |||||||||||||| | || ||||| ||| || |||| |||||||||||||||| |||||    
T  6431 tcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcactttaacctaa 6340  T

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Target: scaffold0586; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 9044 - 9128
Alignment:
Q  6 agggggcaaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagccta 90  Q
    ||||| |||||||||||||||  ||| |||| ||| |||||  ||| ||||| ||| | ||| || |||||||||||||||||||    
T  9044 aggggccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaattaaggaggaaaaagtgcactttagccta 9128  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 37229 - 37148
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgc-aagtttttaaaagttaggggggaaaagtgcactttagcc 88  Q
    |||| ||||||||| |||||  |||||||||||  |||||||| || |||||||||| || ||||||||||||||||||||||    
T  37229 ggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata-gggggaaaagtgcactttagcc 37148  T

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Target: scaffold2034 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 310 - 233
Alignment:
Q  12 caaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttagcc 88  Q
    ||||||| |||||||  ||| |||||| | |||||||||| ||||| ||||||| |||||| ||||||||||||||||    
T  310 caaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

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Target: scaffold0093 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 2484 - 2564
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaag-tttttaaaagttaggggggaaaagtgcactttagc 87  Q
    |||| |||||| || |||||  |||||||||||  ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  2484 ggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta-gggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 7107 - 7187
Alignment:
Q  7 gggggcaaaattgtagttttcatacttagggggctaaaattgcaag-tttttaaaagttaggggggaaaagtgcactttagc 87  Q
    |||| |||||| || |||||  |||||||||||  ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  7107 ggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta-gggggaaaagtgcactttagc 7187  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 13267 - 13192
Alignment:
Q  13 aaaattgtagttttcatacttagggggctaaaattgcaagtttttaaaagttaggggggaaaagtgcactttagcct 89  Q
    ||||||||||||||| ||| |||| ||  |||||  ||| ||||| |||||||||||| ||||||||||||||||||    
T  13267 aaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagttaggggg-aaaagtgcactttagcct 13192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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