View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390-INSERTION-1 (Length: 264)
Name: NF1390-INSERTION-1
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1390-INSERTION-1 |
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Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 35725036 - 35724789
Alignment:
Q |
8 |
taggctacagcaatacctctagaatgccctctcaatactcatcaaaacctaacagnnnnnnnnnntctcctctgannnnnnnnnnatttaattctattta |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||| |
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T |
35725036 |
taggctacagcaatacctctagaatgccctctcaatactcatcaaaacctaacagaaaaaaaaaatctcctctgatttttttt--atttaattcttttta |
35724939 |
T |
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Q |
108 |
agtgcatttaaattaacttgacttatgggtatagtaagtatccaccnnnnnnnaatgcatgaatatccaaaaattctccttctagttctagttatgaatc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
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T |
35724938 |
agtgcatttaaattaacttgacttatgggtatagta----tccacctttttttaatgcatgaatatccaaaaattctccttctagttctagttatcaatc |
35724843 |
T |
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Q |
208 |
aaatggtaggcattcacctagactagatgaatttgttgcattgcatgcaccatg |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
35724842 |
aaatggtaggcattcacctagactagatgaatttgttgcattgcatgcaccatg |
35724789 |
T |
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