View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1390-Insertion-26 (Length: 820)

Name: NF1390-Insertion-26
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1390-Insertion-26
NF1390-Insertion-26
[»] chr3 (70 HSPs)
chr3 (25-820)||(48952939-48953742)
chr3 (525-744)||(48508274-48508490)
chr3 (525-773)||(52138810-52139055)
chr3 (525-773)||(5168842-5169087)
chr3 (532-773)||(35033156-35033394)
chr3 (525-773)||(22083-22327)
chr3 (533-773)||(28245447-28245684)
chr3 (533-773)||(54279030-54279267)
chr3 (525-772)||(38850131-38850376)
chr3 (532-773)||(47233630-47233868)
chr3 (525-773)||(54128388-54128634)
chr3 (534-773)||(51447753-51447982)
chr3 (562-773)||(38430858-38431066)
chr3 (525-662)||(12096732-12096867)
chr3 (548-692)||(54425015-54425157)
chr3 (532-767)||(39235154-39235385)
chr3 (525-773)||(50960664-50960905)
chr3 (623-706)||(19162710-19162793)
chr3 (557-699)||(30294180-30294320)
chr3 (613-772)||(33272136-33272293)
chr3 (525-643)||(52156111-52156227)
chr3 (525-772)||(53519603-53519835)
chr3 (577-773)||(3186779-3186971)
chr3 (633-773)||(38060441-38060580)
chr3 (631-773)||(19757910-19758050)
chr3 (525-731)||(19676108-19676310)
chr3 (525-769)||(45289118-45289359)
chr3 (631-773)||(19737007-19737147)
chr3 (536-773)||(25191387-25191621)
chr3 (525-638)||(38060858-38060969)
chr3 (525-703)||(42510043-42510219)
chr3 (617-773)||(43694888-43695037)
chr3 (523-602)||(49042114-49042194)
chr3 (612-772)||(45728158-45728320)
chr3 (567-773)||(52678919-52679118)
chr3 (525-602)||(53262319-53262396)
chr3 (557-773)||(39600740-39600953)
chr3 (532-653)||(54365009-54365128)
chr3 (525-602)||(47555359-47555436)
chr3 (537-597)||(39208791-39208851)
chr3 (537-597)||(40106659-40106719)
chr3 (526-597)||(36304149-36304220)
chr3 (548-602)||(54422893-54422947)
chr3 (525-602)||(311336-311413)
chr3 (525-602)||(2133639-2133716)
chr3 (525-597)||(29601075-29601147)
chr3 (525-605)||(48734174-48734254)
chr3 (624-772)||(48734259-48734406)
chr3 (606-692)||(33755448-33755534)
chr3 (526-592)||(49045023-49045089)
chr3 (527-597)||(49841799-49841869)
chr3 (525-602)||(15296085-15296162)
chr3 (532-648)||(17022706-17022820)
chr3 (532-597)||(40116372-40116437)
chr3 (532-592)||(4472421-4472481)
chr3 (525-593)||(30797849-30797917)
chr3 (525-593)||(32170592-32170660)
chr3 (525-597)||(40991614-40991686)
chr3 (532-698)||(23534604-23534768)
chr3 (537-596)||(48712114-48712173)
chr3 (532-590)||(6780697-6780755)
chr3 (525-587)||(7895907-7895969)
chr3 (525-587)||(24541359-24541421)
chr3 (525-575)||(40122619-40122669)
chr3 (525-591)||(45374504-45374570)
chr3 (525-575)||(46148233-46148283)
chr3 (536-597)||(19758070-19758131)
chr3 (564-597)||(44571610-44571643)
chr3 (525-582)||(45486876-45486933)
chr3 (525-586)||(52927875-52927936)
[»] chr7 (72 HSPs)
chr7 (525-773)||(43491318-43491563)
chr7 (525-773)||(2885749-2885994)
chr7 (525-773)||(12841302-12841547)
chr7 (525-773)||(46355883-46356128)
chr7 (532-773)||(34869430-34869668)
chr7 (525-773)||(44855201-44855444)
chr7 (525-773)||(11593970-11594215)
chr7 (557-773)||(13859067-13859280)
chr7 (525-773)||(35906228-35906473)
chr7 (525-773)||(39906399-39906642)
chr7 (525-773)||(43281684-43281929)
chr7 (525-773)||(49029286-49029531)
chr7 (525-772)||(31682629-31682873)
chr7 (525-773)||(37617954-37618200)
chr7 (525-779)||(15682178-15682429)
chr7 (525-773)||(45836509-45836752)
chr7 (525-773)||(6374878-6375123)
chr7 (525-773)||(22349630-22349875)
chr7 (532-773)||(33349840-33350078)
chr7 (525-701)||(7273181-7273355)
chr7 (525-771)||(36652004-36652247)
chr7 (525-773)||(29650394-29650639)
chr7 (536-772)||(35559031-35559264)
chr7 (525-662)||(40979955-40980090)
chr7 (626-773)||(33072962-33073108)
chr7 (580-773)||(31005233-31005423)
chr7 (540-773)||(36869286-36869516)
chr7 (525-701)||(31681047-31681218)
chr7 (532-706)||(23404493-23404665)
chr7 (562-773)||(36136774-36136982)
chr7 (532-662)||(38900077-38900205)
chr7 (525-735)||(28627960-28628167)
chr7 (525-706)||(1011123-1011301)
chr7 (525-773)||(38607014-38607247)
chr7 (532-698)||(24598221-24598385)
chr7 (536-655)||(45601603-45601720)
chr7 (525-652)||(9210731-9210856)
chr7 (541-773)||(47848684-47848912)
chr7 (525-602)||(27648958-27649035)
chr7 (670-773)||(7273049-7273151)
chr7 (532-665)||(44951271-44951403)
chr7 (525-599)||(34035181-34035255)
chr7 (525-593)||(28208355-28208423)
chr7 (525-647)||(48919247-48919367)
chr7 (557-706)||(1531420-1531567)
chr7 (525-602)||(32631742-32631819)
chr7 (525-602)||(40415185-40415262)
chr7 (628-773)||(7189348-7189498)
chr7 (525-593)||(30814152-30814220)
chr7 (537-597)||(36101816-36101876)
chr7 (535-594)||(36239833-36239892)
chr7 (532-602)||(21078095-21078165)
chr7 (538-600)||(31859055-31859117)
chr7 (535-597)||(37976418-37976480)
chr7 (541-602)||(35922431-35922492)
chr7 (525-602)||(42969876-42969953)
chr7 (525-602)||(47852265-47852342)
chr7 (525-580)||(48515475-48515530)
chr7 (548-649)||(21517430-21517529)
chr7 (634-695)||(32631663-32631724)
chr7 (533-602)||(33073107-33073176)
chr7 (623-773)||(43282418-43282568)
chr7 (525-597)||(33103109-33103181)
chr7 (535-583)||(44401164-44401212)
chr7 (526-597)||(1569199-1569270)
chr7 (533-583)||(26332908-26332958)
chr7 (525-602)||(14057656-14057733)
chr7 (525-602)||(14367684-14367761)
chr7 (532-597)||(27893597-27893662)
chr7 (532-597)||(34341429-34341494)
chr7 (533-594)||(34926557-34926618)
chr7 (525-593)||(42187628-42187696)
[»] chr5 (52 HSPs)
chr5 (525-773)||(38684977-38685222)
chr5 (525-773)||(4496394-4496639)
chr5 (525-774)||(12492411-12492657)
chr5 (525-773)||(1287606-1287851)
chr5 (525-774)||(10639313-10639557)
chr5 (525-773)||(24178520-24178765)
chr5 (525-773)||(28976886-28977131)
chr5 (525-773)||(14665724-14665967)
chr5 (525-773)||(20456783-20457028)
chr5 (525-769)||(2075500-2075742)
chr5 (532-773)||(16347414-16347650)
chr5 (525-698)||(2915523-2915693)
chr5 (525-773)||(1275274-1275519)
chr5 (525-773)||(3301854-3302099)
chr5 (525-706)||(26884716-26884894)
chr5 (525-693)||(13561413-13561579)
chr5 (535-773)||(34273037-34273258)
chr5 (558-701)||(38501478-38501619)
chr5 (525-690)||(14911264-14911427)
chr5 (525-651)||(29816513-29816637)
chr5 (536-703)||(27961-28126)
chr5 (525-602)||(5558319-5558396)
chr5 (532-638)||(16913917-16914021)
chr5 (523-597)||(418059-418133)
chr5 (525-600)||(30213755-30213830)
chr5 (556-773)||(36215508-36215712)
chr5 (525-595)||(43557860-43557930)
chr5 (525-651)||(30588578-30588702)
chr5 (525-597)||(32442152-32442224)
chr5 (629-703)||(8082083-8082157)
chr5 (623-773)||(14749317-14749466)
chr5 (523-597)||(20367076-20367150)
chr5 (525-630)||(28276390-28276493)
chr5 (532-597)||(9235230-9235295)
chr5 (525-597)||(14667954-14668026)
chr5 (525-589)||(18855798-18855862)
chr5 (562-694)||(17340500-17340630)
chr5 (538-597)||(23980127-23980186)
chr5 (548-646)||(42504297-42504393)
chr5 (525-583)||(11675727-11675785)
chr5 (623-692)||(1525734-1525803)
chr5 (525-594)||(15252771-15252840)
chr5 (668-773)||(43475250-43475354)
chr5 (536-653)||(6889122-6889237)
chr5 (533-583)||(7640542-7640592)
chr5 (623-773)||(15489615-15489764)
chr5 (623-773)||(28676605-28676754)
chr5 (623-773)||(31636043-31636192)
chr5 (548-693)||(31906750-31906893)
chr5 (532-597)||(6788250-6788315)
chr5 (641-698)||(11675594-11675651)
chr5 (537-606)||(41808096-41808165)
[»] chr4 (74 HSPs)
chr4 (525-770)||(39708446-39708688)
chr4 (525-773)||(436239-436484)
chr4 (525-773)||(4440863-4441108)
chr4 (525-773)||(31959841-31960086)
chr4 (525-771)||(48622570-48622813)
chr4 (525-773)||(52569542-52569787)
chr4 (525-773)||(48174120-48174365)
chr4 (525-773)||(26037532-26037777)
chr4 (532-773)||(37797862-37798099)
chr4 (532-773)||(53707804-53708042)
chr4 (532-773)||(56375300-56375538)
chr4 (533-773)||(33227219-33227456)
chr4 (533-773)||(1793470-1793709)
chr4 (527-773)||(33190877-33191120)
chr4 (538-772)||(20601692-20601917)
chr4 (525-698)||(39100563-39100734)
chr4 (535-773)||(46582862-46583096)
chr4 (525-773)||(1777044-1777289)
chr4 (532-701)||(47265229-47265396)
chr4 (537-773)||(43433934-43434167)
chr4 (557-773)||(50286972-50287185)
chr4 (532-773)||(37773485-37773723)
chr4 (525-773)||(27450207-27450451)
chr4 (525-773)||(28236193-28236437)
chr4 (525-764)||(32479057-32479293)
chr4 (525-759)||(8286455-8286694)
chr4 (555-772)||(20192044-20192258)
chr4 (525-773)||(23906324-23906567)
chr4 (525-689)||(21236951-21237113)
chr4 (533-654)||(6957726-6957845)
chr4 (525-654)||(12494791-12494918)
chr4 (555-700)||(50679586-50679729)
chr4 (548-772)||(20591356-20591571)
chr4 (563-690)||(20821073-20821197)
chr4 (541-697)||(16003011-16003165)
chr4 (583-744)||(1211476-1211633)
chr4 (525-654)||(7947065-7947192)
chr4 (562-773)||(41009414-41009622)
chr4 (525-696)||(35690357-35690526)
chr4 (535-694)||(51421818-51421975)
chr4 (535-653)||(4548151-4548267)
chr4 (562-694)||(45204903-45205032)
chr4 (532-662)||(51811312-51811440)
chr4 (533-698)||(27983277-27983440)
chr4 (525-602)||(19969359-19969436)
chr4 (525-654)||(21528416-21528543)
chr4 (525-602)||(19154890-19154967)
chr4 (526-586)||(883388-883448)
chr4 (525-698)||(28351643-28351814)
chr4 (540-735)||(53518365-53518554)
chr4 (525-597)||(55007929-55008001)
chr4 (580-661)||(50862764-50862844)
chr4 (535-597)||(22873636-22873698)
chr4 (623-773)||(35555770-35555919)
chr4 (557-599)||(41729509-41729551)
chr4 (668-773)||(10209044-10209148)
chr4 (631-695)||(31459093-31459157)
chr4 (538-597)||(34208309-34208368)
chr4 (629-708)||(55579106-55579185)
chr4 (623-773)||(26356629-26356778)
chr4 (567-773)||(7092290-7092492)
chr4 (536-597)||(28486104-28486165)
chr4 (525-597)||(16875779-16875851)
chr4 (525-597)||(31043255-31043327)
chr4 (525-593)||(56439598-56439666)
chr4 (536-650)||(21107124-21107236)
chr4 (526-597)||(34233052-34233123)
chr4 (523-597)||(5306479-5306553)
chr4 (533-583)||(12443292-12443342)
chr4 (548-598)||(46749729-46749779)
chr4 (523-581)||(54935348-54935406)
chr4 (536-597)||(25575007-25575068)
chr4 (532-597)||(26024884-26024949)
chr4 (562-642)||(41009283-41009361)
[»] chr1 (73 HSPs)
chr1 (532-701)||(39318210-39318377)
chr1 (525-773)||(34792376-34792621)
chr1 (525-773)||(1210755-1211000)
chr1 (525-773)||(49347420-49347665)
chr1 (525-773)||(38807698-38807943)
chr1 (526-773)||(22090106-22090350)
chr1 (525-773)||(30202157-30202402)
chr1 (525-773)||(8671928-8672173)
chr1 (525-773)||(51440792-51441037)
chr1 (525-773)||(51602066-51602311)
chr1 (525-765)||(25979258-25979495)
chr1 (557-773)||(32231013-32231226)
chr1 (525-773)||(4001482-4001727)
chr1 (525-769)||(4029136-4029377)
chr1 (532-773)||(43240413-43240651)
chr1 (525-773)||(696279-696525)
chr1 (525-698)||(37311782-37311953)
chr1 (525-773)||(9592744-9592989)
chr1 (525-773)||(15085944-15086177)
chr1 (525-662)||(52921200-52921335)
chr1 (525-773)||(8391782-8392027)
chr1 (634-773)||(32082879-32083017)
chr1 (536-773)||(9599432-9599666)
chr1 (525-694)||(37462903-37463070)
chr1 (642-768)||(27847947-27848072)
chr1 (525-694)||(52561616-52561783)
chr1 (548-702)||(478758-478909)
chr1 (623-773)||(48431529-48431678)
chr1 (557-706)||(18469141-18469288)
chr1 (525-602)||(24020294-24020371)
chr1 (532-773)||(9509328-9509566)
chr1 (525-644)||(12930338-12930455)
chr1 (525-597)||(41560412-41560484)
chr1 (631-694)||(36624003-36624066)
chr1 (532-675)||(4415455-4415597)
chr1 (525-602)||(4707248-4707324)
chr1 (525-590)||(28090721-28090786)
chr1 (525-597)||(8796392-8796464)
chr1 (525-698)||(32404553-32404724)
chr1 (532-638)||(27520241-27520345)
chr1 (525-599)||(2544774-2544848)
chr1 (623-773)||(5338734-5338883)
chr1 (525-599)||(40568437-40568511)
chr1 (525-587)||(44941803-44941865)
chr1 (613-698)||(34827217-34827302)
chr1 (532-596)||(10200340-10200404)
chr1 (525-597)||(19908062-19908134)
chr1 (523-602)||(32079202-32079279)
chr1 (525-597)||(45510860-45510932)
chr1 (525-597)||(52532643-52532715)
chr1 (535-602)||(52739547-52739615)
chr1 (538-597)||(6084158-6084217)
chr1 (535-597)||(5338896-5338958)
chr1 (525-602)||(32082783-32082861)
chr1 (535-597)||(43375635-43375697)
chr1 (679-777)||(51812531-51812628)
chr1 (532-597)||(19936643-19936708)
chr1 (525-574)||(28533673-28533722)
chr1 (525-602)||(39140693-39140770)
chr1 (526-586)||(1290059-1290119)
chr1 (525-597)||(28511828-28511900)
chr1 (525-597)||(34444539-34444611)
chr1 (525-597)||(48431426-48431498)
chr1 (525-588)||(21769738-21769801)
chr1 (533-580)||(26113474-26113521)
chr1 (532-583)||(27072521-27072572)
chr1 (525-602)||(46423243-46423317)
chr1 (647-773)||(39140530-39140655)
chr1 (539-597)||(39776936-39776994)
chr1 (548-602)||(44905406-44905460)
chr1 (623-664)||(8628148-8628189)
chr1 (532-597)||(25715360-25715425)
chr1 (525-593)||(29128970-29129039)
[»] chr8 (52 HSPs)
chr8 (525-773)||(36545159-36545404)
chr8 (525-773)||(36565268-36565513)
chr8 (525-773)||(12491165-12491410)
chr8 (525-773)||(11523750-11523996)
chr8 (525-773)||(40813334-40813579)
chr8 (525-773)||(8879473-8879712)
chr8 (557-773)||(18125183-18125395)
chr8 (525-768)||(37077768-37078004)
chr8 (532-773)||(42854038-42854276)
chr8 (525-698)||(42469754-42469925)
chr8 (525-701)||(21121227-21121400)
chr8 (558-773)||(36395009-36395222)
chr8 (557-773)||(39946867-39947080)
chr8 (525-773)||(2796567-2796808)
chr8 (555-680)||(2027632-2027755)
chr8 (525-694)||(45419323-45419490)
chr8 (535-735)||(29520698-29520894)
chr8 (532-698)||(26904941-26905104)
chr8 (525-698)||(8932787-8932958)
chr8 (532-735)||(43904699-43904899)
chr8 (525-602)||(44529403-44529480)
chr8 (527-634)||(25300247-25300352)
chr8 (525-596)||(490519-490590)
chr8 (525-657)||(14742109-14742236)
chr8 (525-735)||(42584419-42584613)
chr8 (525-653)||(35914628-35914754)
chr8 (525-602)||(44047559-44047636)
chr8 (525-597)||(23492217-23492289)
chr8 (527-634)||(25288912-25289017)
chr8 (538-703)||(30559772-30559935)
chr8 (560-653)||(35643668-35643759)
chr8 (526-682)||(2216388-2216540)
chr8 (525-599)||(15215439-15215513)
chr8 (536-597)||(21425229-21425290)
chr8 (525-602)||(25473430-25473507)
chr8 (538-673)||(28269720-28269851)
chr8 (555-602)||(12025955-12026002)
chr8 (525-698)||(32931045-32931215)
chr8 (536-593)||(31716007-31716064)
chr8 (557-605)||(3464230-3464277)
chr8 (717-773)||(12796916-12796972)
chr8 (563-717)||(5908711-5908863)
chr8 (686-773)||(6510614-6510700)
chr8 (622-773)||(25985722-25985871)
chr8 (623-698)||(29700360-29700435)
chr8 (533-587)||(8255568-8255622)
chr8 (631-681)||(28255023-28255073)
chr8 (525-575)||(30689940-30689990)
chr8 (532-597)||(17491688-17491753)
chr8 (525-574)||(27556329-27556378)
chr8 (536-597)||(41971828-41971889)
chr8 (525-602)||(45041343-45041419)
[»] chr6 (38 HSPs)
chr6 (532-773)||(30031266-30031504)
chr6 (525-701)||(12890656-12890830)
chr6 (525-773)||(28085386-28085631)
chr6 (533-773)||(32755931-32756168)
chr6 (532-773)||(21351871-21352109)
chr6 (537-702)||(5080920-5081083)
chr6 (536-769)||(35043479-35043709)
chr6 (525-773)||(5258175-5258420)
chr6 (538-773)||(5631832-5632064)
chr6 (557-770)||(9593767-9593975)
chr6 (532-773)||(608167-608409)
chr6 (541-773)||(33496971-33497198)
chr6 (631-772)||(10099990-10100130)
chr6 (532-773)||(20427671-20427908)
chr6 (525-655)||(34143792-34143920)
chr6 (525-655)||(34156408-34156536)
chr6 (613-698)||(7133830-7133915)
chr6 (613-698)||(7136753-7136838)
chr6 (532-773)||(24665820-24666059)
chr6 (525-653)||(34532-34658)
chr6 (635-773)||(14030817-14030954)
chr6 (668-772)||(30679417-30679520)
chr6 (533-689)||(5095927-5096081)
chr6 (525-695)||(9706857-9707025)
chr6 (617-773)||(2689650-2689799)
chr6 (525-602)||(3206486-3206563)
chr6 (525-602)||(31819009-31819086)
chr6 (525-602)||(34934857-34934934)
chr6 (525-597)||(31818714-31818786)
chr6 (567-694)||(28026896-28027021)
chr6 (644-698)||(26291863-26291917)
chr6 (532-596)||(2079465-2079529)
chr6 (525-597)||(12133929-12134001)
chr6 (726-773)||(12890594-12890641)
chr6 (532-602)||(14030973-14031043)
chr6 (532-573)||(1615257-1615298)
chr6 (536-597)||(3210546-3210607)
chr6 (623-692)||(31831982-31832051)
[»] scaffold0018 (1 HSPs)
scaffold0018 (525-773)||(31478-31723)
[»] chr2 (59 HSPs)
chr2 (525-773)||(3866082-3866327)
chr2 (525-773)||(36183461-36183706)
chr2 (525-773)||(38429894-38430139)
chr2 (525-773)||(45367652-45367897)
chr2 (525-773)||(12734709-12734955)
chr2 (525-773)||(2610598-2610843)
chr2 (525-773)||(8180790-8181035)
chr2 (525-773)||(25834691-25834933)
chr2 (525-773)||(11992135-11992380)
chr2 (525-762)||(451675-451909)
chr2 (525-698)||(28508762-28508933)
chr2 (525-773)||(38452713-38452957)
chr2 (525-793)||(24583658-24583924)
chr2 (525-678)||(31959625-31959776)
chr2 (525-773)||(41763070-41763314)
chr2 (525-773)||(3243680-3243925)
chr2 (525-735)||(7326187-7326394)
chr2 (525-773)||(4807606-4807850)
chr2 (538-773)||(18424417-18424649)
chr2 (557-762)||(6237812-6238014)
chr2 (525-662)||(35643068-35643203)
chr2 (524-773)||(41197253-41197500)
chr2 (537-698)||(39029665-39029824)
chr2 (525-640)||(9996653-9996766)
chr2 (525-734)||(18958960-18959166)
chr2 (533-694)||(13149419-13149579)
chr2 (525-655)||(43573157-43573284)
chr2 (525-600)||(3635350-3635425)
chr2 (525-663)||(45543100-45543235)
chr2 (525-767)||(23997630-23997857)
chr2 (525-602)||(227367-227444)
chr2 (525-602)||(9496044-9496121)
chr2 (525-602)||(30306210-30306287)
chr2 (523-605)||(9394655-9394737)
chr2 (525-595)||(39709228-39709298)
chr2 (525-654)||(33287549-33287676)
chr2 (548-638)||(41545549-41545637)
chr2 (535-597)||(19336930-19336992)
chr2 (532-773)||(43751981-43752219)
chr2 (535-602)||(12882082-12882149)
chr2 (543-602)||(30743707-30743766)
chr2 (532-690)||(13443942-13444098)
chr2 (525-586)||(9531627-9531688)
chr2 (525-582)||(12520089-12520146)
chr2 (623-692)||(19235107-19235176)
chr2 (532-597)||(35755279-35755344)
chr2 (525-593)||(3720442-3720510)
chr2 (629-705)||(11744600-11744676)
chr2 (717-773)||(16097202-16097258)
chr2 (525-589)||(38328397-38328461)
chr2 (717-773)||(43238309-43238365)
chr2 (532-655)||(26670895-26671016)
chr2 (533-597)||(11412890-11412957)
chr2 (555-596)||(17581643-17581684)
chr2 (532-597)||(21834737-21834802)
chr2 (527-580)||(23915722-23915775)
chr2 (536-597)||(36650625-36650686)
chr2 (623-692)||(42543325-42543394)
chr2 (525-594)||(45077915-45077984)
[»] scaffold0024 (1 HSPs)
scaffold0024 (525-773)||(82731-82973)
[»] scaffold0570 (1 HSPs)
scaffold0570 (536-773)||(986-1220)
[»] scaffold0045 (1 HSPs)
scaffold0045 (537-769)||(86648-86877)
[»] scaffold0692 (1 HSPs)
scaffold0692 (525-701)||(4717-4891)
[»] scaffold0157 (1 HSPs)
scaffold0157 (525-654)||(25559-25686)
[»] scaffold0113 (2 HSPs)
scaffold0113 (525-739)||(11576-11785)
scaffold0113 (717-773)||(11812-11868)
[»] scaffold0199 (1 HSPs)
scaffold0199 (535-643)||(14722-14828)
[»] scaffold0041 (1 HSPs)
scaffold0041 (525-673)||(16687-16833)
[»] scaffold0036 (1 HSPs)
scaffold0036 (532-773)||(4315-4543)
[»] scaffold0050 (1 HSPs)
scaffold0050 (532-653)||(58260-58379)
[»] scaffold1318 (1 HSPs)
scaffold1318 (525-602)||(509-586)
[»] scaffold0025 (1 HSPs)
scaffold0025 (538-597)||(39502-39561)
[»] scaffold0245 (1 HSPs)
scaffold0245 (526-586)||(16464-16524)
[»] scaffold0067 (1 HSPs)
scaffold0067 (533-597)||(25714-25778)
[»] scaffold0168 (1 HSPs)
scaffold0168 (525-588)||(28916-28979)


Alignment Details
Target: chr3 (Bit Score: 651; Significance: 0; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 651; E-Value: 0
Query Start/End: Original strand, 25 - 820
Target Start/End: Original strand, 48952939 - 48953742
Alignment:
Q  25 gattcttctgggtgtaggtgttgccttgcaagcaatgaacaagtagattttacctacaagattcctcaacttatttatattagaactaattgccttgcat 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48952939 gattcttctgggtgtaagtgttgccttgcaagcaatgaacaagtagattttacctacaagattcctcaacttatttatattagaactaattgccttgcat 48953038  T
Q  125 agcaaattacatttttggaacattaaaaaatatgatacagaatataatggaatatgatccaatgcattttatcccatttcagataatacactttttattg 224  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48953039 agcaaattacatttttggaacattaaaaaatatgatacagaacataatggaatatgatccaatgcattttatcccatttcagatgatacactttttattg 48953138  T
Q  225 tgtcaataatcgtttttgggttcaatatagggttaaactagnnnnnnnnnnnnnnnnnn---aagaggcgttaaaactagttattttcttcgtgccagca 321  Q
    |||||||||||||||||||||||||||||||||||||||||                     ||||||||||||||||||||||||||||||||||||||    
T  48953139 tgtcaataatcgtttttgggttcaatatagggttaaactagttttttattttttttatttttaagaggcgttaaaactagttattttcttcgtgccagca 48953238  T
Q  322 taaaaatatcccaacaatgaagtggttttttggggcagcaaataatggaatcttgattcatctcattccaatgcatccccctctccattagatatctaaa 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48953239 taaaaatatcccaacaatgaagtggttttttggggcagcaaataatggaatcatgattcatctcattccaatgcatccccctctccattagatatctaaa 48953338  T
Q  422 atacacttgatttttctatttcgatggcagtgtatcttttatatctttcaaaggaaataaatttgaatattaggatagc----tgataaagaaaaaatcc 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| |||    
T  48953339 atacacttgatttttctatttcgatggcagtgtatcttttatatctttcaaaggaaataaatttgaatattaggatagctagctgataaagaaaaactcc 48953438  T
Q  518 aaaatccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttct 617  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48953439 aaaatccaagtggcgtcggctacatggattaaattacgtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttttt 48953538  T
Q  618 aatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctt 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  48953539 aatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatctgcgggtctt 48953638  T
Q  718 tctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatagttgtcattcttaatcctatctcatccagtctta-cgctcatcca 816  Q
    ||||| | |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  48953639 tctctttacatgcccaaatcatctaagtttattttctaccaacttttctactataggtgtcattcttaatcctatctcatccaatcttaccgctcatcca 48953738  T
Q  817 acgc 820  Q
    ||||    
T  48953739 acgc 48953742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 525 - 744
Target Start/End: Complemental strand, 48508490 - 48508274
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | ||||||||||||||||||| |||||||| ||||||||||||||||| || |  | |||||||||| ||    
T  48508490 aagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattgacctctaaa--tcctttctaatggtt 48508393  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||    
T  48508392 tctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttacgacaacatctacgggtc-ttctctct 48508294  T
Q  725 tcatgcccaaatcatataag 744  Q
     |||||||||| ||| ||||    
T  48508293 acatgcccaaaccatctaag 48508274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 52139055 - 52138810
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  52139055 aagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 52138958  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| | ||||| ||||||||| ||  ||| | |||||| ||||||||    
T  52138957 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttaatctattcttcttaccacggcatctacaggtc-ttctctct 52138859  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  52138858 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 52138810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 5169087 - 5168842
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||  ||||| | |||||||||| ||    
T  5169087 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacc--tataaatcctttctaatggtt 5168990  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| || |||||| ||||||||||||||| |||||| ||  ||||||||||||| |||||||||||||| || ||  ||| | | |||| ||||||||    
T  5168989 tctctaatggttttcttaggtcttcctctacctcttttaactagactctcctccatttgatctactcttctaacaacggcatctacgggtc-ttctctct 5168891  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||  |||| ||| ||||  |||||||||||||||||||||| ||||    
T  5168890 acatgttcaaaccatctaagcgtattttctaccaacttttctaccatag 5168842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 35033394 - 35033156
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||  | ||| |  ||||||||| ||||||  |    
T  35033394 gtcggctacatggatcaaataacgccatagtgttctatcaaaaaccatatttggatccaactcattgacc--tctaaatcttttctaatggtttctcgaa 35033297  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    | |||||| ||||||||||||||| |||||| ||| ||||||||||||| |||| |||||||||||| |   ||| | | |||| |||||||| |||| |    
T  35033296 tggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatttactcttcttacaatggcatctacgggtc-ttctctctacatgtc 35033198  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||||||||  |||||||||||||||||||||||||||    
T  35033197 caaaccatataagcctattttctaccaacttttctactatag 35033156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 22327 - 22083
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||| || |  | |||||||||| ||    
T  22327 aagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaa--tcctttctaatggtt 22230  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| || |||||| || |||||||||||| |||||| ||||||||||||||||| | ||||||||||||||| ||  ||| | | |||| ||||||||    
T  22229 tctctaatggttttcttaagtcttcctctacctcttttaacccgactctcctccatttaatctactcttcttacaacggcatctacgggtc-ttctctct 22131  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  || ||||||||||||||||||||||||    
T  22130 acatgtccaaaccatctaagccta-tttctaccaacttttctactatag 22083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 533 - 773
Target Start/End: Complemental strand, 28245684 - 28245447
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttat 632  Q
    |||||||||||||| |||| | ||||||||||||||| ||| | || ||||||||||||||||||||||| || |  |  ||||||||  ||||||| ||    
T  28245684 tcggctacatggatcaaatgacgtcatagtgttctattatacaccaaatttggatccaactcattgacctctaaa--tcatttctaatcgtttctctaat 28245587  T
Q  633 agttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccc 732  Q
    ||||||||||||||||| ||||| |||||| ||  ||||||||||||| |||| |||||||||||| ||  ||| | | ||| ||||||||| |||||||    
T  28245586 agttttcctaggtcttcatctacctcttttaacttgactctcctccatttgatatactcttcttaccacggcatctacgggt-tttctctctacatgccc 28245488  T
Q  733 aaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||| ||| ||||  |||||||||||||||||||||||||||    
T  28245487 aaaccatctaagtctattttctaccaacttttctactatag 28245447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 533 - 773
Target Start/End: Complemental strand, 54279267 - 54279030
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttat 632  Q
    |||||||||| ||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||||||| ||    
T  54279267 tcggctacattgatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttctctaat 54279170  T
Q  633 agttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccc 732  Q
    ||||||||||||||||| ||||| |||||| ||  ||||||||||||| |||||||||||| |||| ||  ||| | | |||| |||||||| | |||||    
T  54279169 agttttcctaggtcttcttctacctcttttaacttgactctcctccatttgatctactctttttaccacggcatctacgggtc-ttctctctacgtgccc 54279071  T
Q  733 aaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||| | | ||||  |||||||||||||||||||||||||||    
T  54279070 aaaccgtctaagcctattttctaccaacttttctactatag 54279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 525 - 772
Target Start/End: Complemental strand, 38850376 - 38850131
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||| || ||||| || ||| |||||||| | || |   | ||||||||| ||    
T  38850376 aagtggggtcggctacatggatcaaattacgtcatagtgttctatcataaaccaaatttgaattcaattcattgacttctagatcct-tttctaatggtt 38850278  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    | ||| ||| ||||||||||||||||||||| |||| | ||  |||||||||||||  ||||||||||||||||||| || | | | | || ||||||||    
T  38850277 tatctaataattttcctaggtcttcctctacctcttctaacttgactctcctccattcgatctactcttcttacgacgacctctactgatc-ttctctct 38850179  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactata 772  Q
     |||||||||| ||| ||||  ||||||||||||||||||||||||||    
T  38850178 acatgcccaaaccatctaagtctattttctaccaacttttctactata 38850131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 47233630 - 47233868
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||||||||||| || |||| | | ||||||||||||||| ||| |||||||||||| || |||||||||| ||  | | |||||||||| ||||||| |    
T  47233630 gtcggctacatgaatcaaatgacgccatagtgttctatcaaaaaccatatttggatctaattcattgacctcta--attcctttctaatggtttctctaa 47233727  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||| ||||||||| || || |||||| ||| ||||||||||||| |||||||||||||| || ||  ||| | | |||| |||||||| |||| |    
T  47233728 tagttttcttaggtcttcttcaacatcttttaacctgactctcctccatttgatctactcttctaacaacggcatctacgggtc-ttctctctacatgtc 47233826  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||||||||||||||    
T  47233827 caaaccatctaagcctattttctaccaacttttctactatag 47233868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 54128634 - 54128388
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| |||| |||||||||| |||||| | |||| |||||||||||||| ||||||||| |||||||||||||||| || |   |||||| | ||  |    
T  54128634 aagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattgacctctaaa---tctttccttatagt 54128538  T
Q  624 ttctctta-tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||| ||||||| |||||||||||||||| ||||| || | ||||  ||||||||||||||||||| | |||  || ||| | ||||||||| |||    
T  54128537 ttctcttaatagtttttctaggtcttcctctacctctttcgatctgactaacctccatctgatctactctacgtactgcatcatctacaggtcttt-tct 54128439  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||||||||| ||  ||||  |||||||||||| ||||||||||||||    
T  54128438 ctacatgcccaaaccacctaagcctattttctaccatcttttctactatag 54128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 534 - 773
Target Start/End: Original strand, 51447753 - 51447982
Alignment:
Q  534 cggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttata 633  Q
    |||||||||| || |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||||||| |||    
T  51447753 cggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtttctctaata 51447850  T
Q  634 gttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccca 733  Q
    ||||||||||||||||       |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | | || |||||||| ||||||||    
T  51447851 gttttcctaggtcttc-------tcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacggatc-ttctctctacatgccca 51447942  T
Q  734 aatcatataaggttattttctaccaacttttctactatag 773  Q
    ||  || ||||  |||||||||||||||||||||||||||    
T  51447943 aactatctaagcctattttctaccaacttttctactatag 51447982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 562 - 773
Target Start/End: Complemental strand, 38431066 - 38430858
Alignment:
Q  562 tgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttcttt 661  Q
    |||||||||||||| ||||||||||||||||||||| |||| || |  |||     |||  |||||||| ||||||| ||| |||||||||||| |||||    
T  38431066 tgttctatcataaaccatatttggatccaactcattaacctctaaaccttccac--aatagtttctcttgtagtttttctaagtcttcctctacctcttt 38430969  T
Q  662 tgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaact 761  Q
    |||   ||||||||||||||||||||||||||| ||| ||||||| ||||||||  ||||||| |||||||||   |  ||||  |||||||||||| ||    
T  38430968 tgatttgactctcctccatctgatctactcttcatactacaacatctgcaggtc-gtctctctacatgcccaatcaacctaagcctattttctaccatct 38430870  T
Q  762 tttctactatag 773  Q
    ||||||||||||    
T  38430869 tttctactatag 38430858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 525 - 662
Target Start/End: Original strand, 12096732 - 12096867
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  12096732 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 12096829  T
Q  625 tctcttatagttttcctaggtcttcctctacttctttt 662  Q
    | ||| ||||||||||||||||||||||||| ||||||    
T  12096830 tttctaatagttttcctaggtcttcctctacctctttt 12096867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 548 - 692
Target Start/End: Original strand, 54425015 - 54425157
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtct 647  Q
    |||||| |||||||| |||||| ||||| |||||||||||||||| ||||||||| || |  | |||| ||||| |  ||||||||| |||| |||||||    
T  54425015 aaattatgtcatagttttctataataaaccatatttggatccaacccattgacctctaaa--tcctttttaatggtccctcttatagctttcttaggtct 54425112  T
Q  648 tcctctacttcttttgacccgactctcctccatctgatctactct 692  Q
    |||||||| |||||||||| || ||||||||||||||||||||||    
T  54425113 tcctctacctcttttgacctgaatctcctccatctgatctactct 54425157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 532 - 767
Target Start/End: Complemental strand, 39235385 - 39235154
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| || | | | |||| ||||||||| |||| ||||||| ||||||||||||| ||  || ||| |  || |||||  ||| || ||    
T  39235385 gtcggctacatggatcaa-tcacgacataatgttctatcgtaaaccatatttagatccaactcattaac--ttctaaatctttcctaatagtttatccta 39235289  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||  | ||||||||||||| |||||||| | |||| |||||||||||||||||||||| ||| ||||||| | |||||| |||||||| ||||||    
T  39235288 tagtttttttgggtcttcctctacctcttttgatctgactttcctccatctgatctactcttcgtactacaacatctacaggtc-ttctctctacatgcc 39235190  T
Q  732 caaatcatataaggttattttctaccaacttttcta 767  Q
    |||| ||  ||||  |||||||||||| ||||||||    
T  39235189 caaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 50960664 - 50960905
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || ||||| |||||| ||||||   |||| || ||||| ||| | ||||||||||||||||||||| | || || |  ||  | |||||  ||    
T  50960664 aagtggggttggctaaatggatcaaattacaccataatggtctatgatacaccatatttggatccaactcattaatctctaaacctt--tcctaatagtt 50960761  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||| | |||| |||||||||||||| | ||||| || ||||||||||||||||||||||||||||||| | |||||||    ||||| ||||||||    
T  50960762 tctcttaaattttttctaggtcttcctctccctctttcgatccgactctcctccatctgatctactcttctttctacaacat----aggtc-ttctctct 50960856  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||  ||||  |||||||||||| ||||||||||||||    
T  50960857 acatgcccaaaccacctaagcctattttctaccatcttttctactatag 50960905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 623 - 706
Target Start/End: Original strand, 19162710 - 19162793
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacat 706  Q
    |||||||||||| |||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  19162710 tttctcttatagatttcctaggtcttcctctaactcttttgacctgactctccttcatctgatctactcttcttacgacaacat 19162793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 557 - 699
Target Start/End: Original strand, 30294180 - 30294320
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||  |||| |  ||| ||||  ||| |||||||||| | ||||||||||||||||     
T  30294180 catagtgttttatcataaatcatacttagatccaactcattgacct--ataaatcttttttaatagtttatcttatagttcttctaggtcttcctctacc 30294277  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacg 699  Q
    ||||||||||||||||||||  |||| || |||||||||||||    
T  30294278 tcttttgacccgactctccttaatctaatttactcttcttacg 30294320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 613 - 772
Target Start/End: Original strand, 33272136 - 33272293
Alignment:
Q  613 tttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcag 712  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| |||| ||| |||||||| ||  ||| | ||     
T  33272136 tttctaatggtttctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatatacacttcttaccacggcatctaca- 33272234  T
Q  713 gtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactata 772  Q
    ||| |||||||| |||||||||| ||| ||||  ||||||||||||||||||||||||||    
T  33272235 gtc-ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactata 33272293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 525 - 643
Target Start/End: Original strand, 52156111 - 52156227
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| | || | | ||||||||||||||||||| |||||||||||||||||||||||||  | ||| | |||||||||||||    
T  52156111 aagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaatgatt 52156208  T
Q  625 tctcttatagttttcctag 643  Q
    ||||| |||||||||||||    
T  52156209 tctctaatagttttcctag 52156227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 525 - 772
Target Start/End: Complemental strand, 53519835 - 53519603
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||| ||| | |||||||||||||||||||||||| || |   |||||             
T  53519835 aagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcattgacctctaaa---tcttt--------- 53519748  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
      | | || |||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||  |||||| |    
T  53519747 --tttaatggttttcttaggtcttcctctacctcttttaacatgactctcctccatttgatctactcttcttacaacggcatctac-ggttcttctctat 53519651  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactata 772  Q
    ||||| ||||| ||| ||||  ||||||||||||||||||||||||||    
T  53519650 tcatgtccaaaacatctaagcctattttctaccaacttttctactata 53519603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 577 - 773
Target Start/End: Complemental strand, 3186971 - 3186779
Alignment:
Q  577 catatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcct 676  Q
    |||||||||||| |||||||||||||||| |  |||||||||||||||| ||||||||||||| ||||| || ||| || |||||||||| |||| | ||    
T  3186971 catatttggatctaactcattgacctttaaa--ttctttctaatgatttttcttatagttttcttaggtatttctccacctcttttgacctgacttttct 3186874  T
Q  677 ccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    | |||||||||| | ||||||| |  |||| | ||  || |||||||| |||||||||||||| | ||  ||||||||||||||||| | |||||||    
T  3186873 caatctgatctatttttcttacaatgacatctacaaatc-ttctctctacatgcccaaatcatct-agcctattttctaccaactttcccactatag 3186779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 633 - 773
Target Start/End: Complemental strand, 38060580 - 38060441
Alignment:
Q  633 agttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccc 732  Q
    ||||||||||||||| ||||||| | |||| ||| ||||||||||||| | ||||||||||||||||||  ||| | |||||| |||||||| |||| ||    
T  38060580 agttttcctaggtctccctctaccttttttaacctgactctcctccatttaatctactcttcttacgacggcatctacaggtc-ttctctctacatgtcc 38060482  T
Q  733 aaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||| ||| ||||  ||||||||||||||||||||| |||||    
T  38060481 aaaccatctaagcctattttctaccaacttttctattatag 38060441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 631 - 773
Target Start/End: Complemental strand, 19758050 - 19757910
Alignment:
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgc 730  Q
    |||||||| |||||||||||||||| | |||||| |  |||||||||||||||||||||||||||||| ||||||| | |||||| |||||||| |||||    
T  19758050 atagtttttctaggtcttcctctacct-ttttgatctaactctcctccatctgatctactcttcttactacaacatctacaggtc-ttctctctgcatgc 19757953  T
Q  731 ccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||  |||   |||||||||||| ||||||||||||||    
T  19757952 tcaaaccacctaaacctattttctaccatcttttctactatag 19757910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 525 - 731
Target Start/End: Original strand, 19676108 - 19676310
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||| | | |||| || ||||||||| | ||||||||||||||||||||| |||  | ||| || || |||||  ||    
T  19676108 aagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcattaacc--tctaaatttttcctaatagtt 19676205  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||| |||||| |||||||||||| ||| |||||||| | |||||||||| ||||||||| |||||  ||| ||| ||| | |||||| ||||||||    
T  19676206 tctcttacagtttttctaggtcttcct-tacctcttttgatctgactctcctctatctgatcttctctttgtactacagcatctacaggtc-ttctctct 19676303  T
Q  725 tcatgcc 731  Q
     ||||||    
T  19676304 acatgcc 19676310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 525 - 769
Target Start/End: Original strand, 45289118 - 45289359
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| || ||| |||||||| |||||| |  ||| |||||||||||||| ||||||||||||||||||||| | || || |   |||||| ||||  |    
T  45289118 aagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcattaatctctaaa---tctttcctaatagt 45289214  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    |||||||||||||||| ||| ||||||||||  |||| | | |  ||| |||||||||||||||||||||||||| |||| || | || ||  |||||||    
T  45289215 ttctcttatagttttcatagatcttcctctatctcttgtaatctaactatcctccatctgatctactcttcttactacaaaatctacaagt-gttctctc 45289313  T
Q  724 ttcatgcccaaatcatataaggttattttctaccaacttttctact 769  Q
    | | |||||||| ||  ||||  ||||||| |||| ||||||||||    
T  45289314 tacgtgcccaaaccacctaagcctattttccaccatcttttctact 45289359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 631 - 773
Target Start/End: Complemental strand, 19737147 - 19737007
Alignment:
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgc 730  Q
    |||||||| ||||||||||||| || | |||||| |  |||||||||||||||||||||||||||||| ||||||| | |||||| |||||||| |||||    
T  19737147 atagtttttctaggtcttcctcaacct-ttttgatctaactctcctccatctgatctactcttcttactacaacatctacaggtc-ttctctctgcatgc 19737050  T
Q  731 ccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||  |||   |||||||||||| ||||||||||||||    
T  19737049 tcaaaccacctaaacctattttctaccatcttttctactatag 19737007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 536 - 773
Target Start/End: Complemental strand, 25191621 - 25191387
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagt 635  Q
    ||||||||||| |||| | | ||||||||||||||| ||| ||||||| |||| || |||||||||| || |  ||  |||||||| ||||||  ||  |    
T  25191621 gctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatctaattcattgacctctaaatctt--ttctaatggtttctcaaatgat 25191524  T
Q  636 tttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaa 735  Q
    |||| ||| ||||||||||| |||||| ||| | ||||||||||| |||||| |||||||||| ||   || | | |||| |||||||| |||| |||||    
T  25191523 tttcttagttcttcctctacctcttttaaccgggctctcctccatttgatcttctcttcttacaacggtatctacgggtc-ttctctctacatgtccaaa 25191425  T
Q  736 tcatataaggttattttctaccaacttttctactatag 773  Q
     ||| ||||  |||||||| |||| |||||||||||||    
T  25191424 ccatctaagtctattttcttccaatttttctactatag 25191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 525 - 638
Target Start/End: Complemental strand, 38060969 - 38060858
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | ||| ||||||||||||||| ||||||||||||||||||||||||  || |||   |||||||||| ||    
T  38060969 aagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcattgac--ttctaaaacctttctaatggtt 38060872  T
Q  625 tctcttatagtttt 638  Q
    ||||| ||||||||    
T  38060871 tctctaatagtttt 38060858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 703
Target Start/End: Original strand, 42510043 - 42510219
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | |||| ||||| |||||||| ||||||| | ||||||||||| |  |||  || |  || |||||| ||    
T  42510043 aagtggggtcggctacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcattta--tttccaaatctttcctaatggtt 42510140  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaa 703  Q
    ||||| |||||||| |||||||||||| | | |||  ||| | |||| |||||||||||||||||||| ||||| ||||    
T  42510141 tctctgatagtttttctaggtcttcctttgcctctagtgatctgactatcctccatctgatctactctccttaccacaa 42510219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 617 - 773
Target Start/End: Original strand, 43694888 - 43695037
Alignment:
Q  617 taatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtct 716  Q
    ||||| ||||||| ||||||||||||| | ||||||||| |||||| ||       |||| ||| ||||||| |||||||||||| |||| | |||||||    
T  43694888 taatggtttctctaatagttttcctagattttcctctacctcttttaact------tccttcatttgatctaatcttcttacgacgacatctacaggtct 43694981  T
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    | |||||| |||||||||| ||| ||||   ||||||||||||||||||||||||||    
T  43694982 t-ctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactatag 43695037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 602
Target Start/End: Complemental strand, 49042194 - 49042114
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcat-aaatcatatttggatccaactcattgacct 602  Q
    |||||||| ||||||||||||||| |||||| | |||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  49042194 ccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcattaacct 49042114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 612 - 772
Target Start/End: Complemental strand, 45728320 - 45728158
Alignment:
Q  612 ctttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctg--atctactcttcttacgacaacatttg 709  Q
    |||||||||| ||||||| ||||||||||||||||||||||||  |||||| ||  ||||||||||||| ||  || |||||||||||| || |||| |     
T  45728320 ctttctaatggtttctctaatagttttcctaggtcttcctctatctcttttaacatgactctcctccatttgatatatactcttcttacaacgacatcta 45728221  T
Q  710 caggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactata 772  Q
      ||| ||||||||| |||| | ||| ||| | |   || |||||||||||||||||||||||    
T  45728220 tgggtttttctctctacatgtcaaaaccatctgatcctactttctaccaacttttctactata 45728158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 567 - 773
Target Start/End: Original strand, 52678919 - 52679118
Alignment:
Q  567 tatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatagttttcctaggtcttcctctacttcttttgac 665  Q
    |||||| ||||||||||| || ||||||||| |||| || |   |||||| ||||  |||||||||  |||||||||||||||| ||||| |||||| ||    
T  52678919 tatcatgaatcatatttgaattcaactcattaacctctaaa---tctttcataatagtttctctta--gttttcctaggtcttcttctacatcttttaac 52679013  T
Q  666 ccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttc 765  Q
    |||||||||||||||| |||||| | |||||||  |||||| | || ||| |||||||| |||| ||||||||    ||  |||||||| ||||||||||    
T  52679014 ccgactctcctccatccgatctatttttcttac--caacatctacaagtc-ttctctctacatgtccaaatcaccagagcctattttcttccaacttttc 52679110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 53262396 - 53262319
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||| ||| |||| | | ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  53262396 aagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacct 53262319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 773
Target Start/End: Original strand, 39600740 - 39600953
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttct-aatgatttctcttatagttttcctaggtcttcctctac 655  Q
    |||| ||||||||| |||| || |||||||||||||||||| |||| || |   ||||||| |||  |||||||||||||||| ||||||||||||||||    
T  39600740 cataatgttctatcgtaaaccagatttggatccaactcattaacctctaaa---tctttcttaatagtttctcttatagtttttctaggtcttcctctac 39600836  T
Q  656 ttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttcta 755  Q
     ||||   | | |||| ||||| |||||||||||||| ||  | |||  || | |||||| |||||| | |||||| ||| ||  |||| || ||||| |    
T  39600837 ctcttgcaatctgactatcctcgatctgatctactctcctcgctacagaatctacaggtc-ttctctttacatgccaaaaccacctaagcttgttttcca 39600935  T
Q  756 ccaacttttctactatag 773  Q
    ||| ||||||||||||||    
T  39600936 ccatcttttctactatag 39600953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 532 - 653
Target Start/End: Original strand, 54365009 - 54365128
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| ||||||| | || ||| |||| |  | |  ||||  || |||||  |||||||||    
T  54365009 gtcggctacatggatcaaattacgtcatagtgttctatcataaaccatattttggtctaacacattaa--tctccaagtctttcctaatagtttctctta 54365106  T
Q  632 tagttttcctaggtcttcctct 653  Q
    ||||||| ||||||||||||||    
T  54365107 tagtttttctaggtcttcctct 54365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 47555359 - 47555436
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| || |||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||||    
T  47555359 aagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacct 47555436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 597
Target Start/End: Complemental strand, 39208851 - 39208791
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||| |||||| |||||| |||||||||||||| ||||||||||||| |||||||    
T  39208851 ctacatggatcaaattacgtcataatgttctatcataaaccatatttggatcctactcatt 39208791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 597
Target Start/End: Original strand, 40106659 - 40106719
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||| |||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  40106659 ctacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcatt 40106719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 597
Target Start/End: Complemental strand, 36304220 - 36304149
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||| ||||||||||||||| |||||| | |||| ||| |||||||||| ||||||| |||||||||||||    
T  36304220 agtggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcatt 36304149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 602
Target Start/End: Original strand, 54422893 - 54422947
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  54422893 aaattatgtcatagttttctataataaaccatatttggatccaactcattgacct 54422947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 311336 - 311413
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| |||||||||||| || |||| | | ||||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  311336 aagtggggtcggctacatgtatcaaatgacgccatagtgttctatcaaaaaccatatctggatccaactaattgacct 311413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 2133639 - 2133716
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||  ||||||||| |||| | | |||||||||||||||||||  |||||||||| ||||||||||||||    
T  2133639 aagtggggtcgagtacatggatcaaatcacgccatagtgttctatcataaactatatttggattcaactcattgacct 2133716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 29601147 - 29601075
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||| ||||||||||| ||||||  ||||| ||||||||||||||  ||||||| ||||||||||||    
T  29601147 aagtggggtcagctacatggatcaaattacatcataatgttctatcataaactatatttgaatccaactcatt 29601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 605
Target Start/End: Original strand, 48734174 - 48734254
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgaccttta 605  Q
    |||||| ||| ||||||||||| || ||| | |||| |||||||||||||| ||| |||||| ||||||| ||||||||||    
T  48734174 aagtggggtcagctacatggatcaacttacgccataatgttctatcataaaccatgtttggacccaactcgttgaccttta 48734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 624 - 772
Target Start/End: Original strand, 48734259 - 48734406
Alignment:
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    |||||| |||||||| | ||| |||||||||| |||||||| |  |||   |||||||||||||||||||| ||| ||| | | | ||| |||| |||||    
T  48734259 ttctctaatagtttttcaaggccttcctctacctcttttgatctaactaatctccatctgatctactcttcgtactacagcctctacagttctt-ctctc 48734357  T
Q  724 ttcatgcccaaatcatataaggttattttctaccaacttttctactata 772  Q
    | |||||||||| ||  ||||  |||||||||||| || ||||||||||    
T  48734358 tacatgcccaaaccacctaagcctattttctaccatctgttctactata 48734406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 692
Target Start/End: Original strand, 33755448 - 33755534
Alignment:
Q  606 taagttctttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactct 692  Q
    |||||| || |||||  |||||||||||||||| |||||| ||||||| | |||  ||| |||||  ||||||||||||||||||||    
T  33755448 taagtttttcctaatagtttctcttatagtttttctaggttttcctctgcctctagtgatccgaccatcctccatctgatctactct 33755534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 592
Target Start/End: Complemental strand, 49045089 - 49045023
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaac 592  Q
    ||||| |||||||||||||||||||||  | |||| |||||| |||||||  |||||||||||||||    
T  49045089 agtggggtcggctacatggattaaattcggccataatgttctgtcataaactatatttggatccaac 49045023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 597
Target Start/End: Complemental strand, 49841869 - 49841799
Alignment:
Q  527 gtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||| ||| ||||||||||| |||||| | |||| |||||||||||| | ||||||| |||||||||||||    
T  49841869 gtggggtcagctacatggatcaaattatgccataatgttctatcatataccatatttcgatccaactcatt 49841799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 15296162 - 15296085
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| |||||| |||||||| ||||||   |||| |||||||||  ||||||||||||||||||| ||||| ||||    
T  15296162 aagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattcattaacct 15296085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 648
Target Start/End: Original strand, 17022706 - 17022820
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||||||||||| ||||||| |   |||| | ||||||||||||  | | ||||||||||||||||||||  | ||| | |||| ||||| ||||||| |    
T  17022706 gtcggctacatgaattaaatgacaccataatattctatcataaactaaaattggatccaactcattgacc--tctaattcctttttaatggtttctctaa 17022803  T
Q  632 tagttttcctaggtctt 648  Q
    ||| |||||||||||||    
T  17022804 tagctttcctaggtctt 17022820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 40116372 - 40116437
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||| ||||| |||||| | |||| |||||||||||||| ||||||| | |||||||||||    
T  40116372 gtcggctacgtggatcaaattacgccataatgttctatcataaaccatatttcggtccaactcatt 40116437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 532 - 592
Target Start/End: Original strand, 4472421 - 4472481
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaac 592  Q
    ||||||||||||||| || |||   ||||||||||||| |||||||||||||| |||||||    
T  4472421 gtcggctacatggatcaagttacaccatagtgttctattataaatcatatttgaatccaac 4472481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 593
Target Start/End: Original strand, 30797849 - 30797917
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||| ||||| ||| |||||| |||||| ||||||||||||||  | ||||||||||||||    
T  30797849 aagtggggtcggttacatagatcaaattacgtcataatgttctatcataaactaaatttggatccaact 30797917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 593
Target Start/End: Complemental strand, 32170660 - 32170592
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||||||||||||| |||||| |||||| |||| ||||||| | |||||||  ||||||||    
T  32170660 aagtggggtcggctacatggatcaaattatgtcataatgttatatcatagaccatatttctatccaact 32170592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 40991686 - 40991614
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||| ||||||||||| ||||||   |||| |||||||||||||| ||||||| | |||||||||||    
T  40991686 aagtggggtcagctacatggatcaaattacaccataatgttctatcataaaccatattttggtccaactcatt 40991614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 698
Target Start/End: Original strand, 23534604 - 23534768
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||| |||||||||| |||||| | |||| |||||||||||||||||||||    ||||||||||| |  | | |||||  || |||||  ||||| |||    
T  23534604 gtcgactacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaa--tctctaagtctttcctaatagtttctgtta 23534701  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    || ||||  | ||||||||||||| |||  ||| |  ||| || ||||||||||||||||| |||||    
T  23534702 taatttttttgggtcttcctctacctctagtgatctaactatcatccatctgatctactctccttac 23534768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 48712114 - 48712173
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcat 596  Q
    |||||||||| |||| | |||||| |||| ||||||||| |||||||| |||||||||||    
T  48712114 ctacatggatgaaataatgtcataatgttatatcataaaccatatttgaatccaactcat 48712173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 590
Target Start/End: Original strand, 6780697 - 6780755
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatcca 590  Q
    |||||||||| |||| |||||| ||||||  ||||||||  ||||||||||||||||||    
T  6780697 gtcggctacagggatcaaattacgtcataacgttctatctgaaatcatatttggatcca 6780755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 587
Target Start/End: Original strand, 7895907 - 7895969
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggat 587  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||    
T  7895907 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggat 7895969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 587
Target Start/End: Original strand, 24541359 - 24541421
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggat 587  Q
    |||||| ||||| ||||||||| |||||| | |||| ||||||||| |||| |||||||||||    
T  24541359 aagtggggtcgggtacatggatcaaattacgccataatgttctatcctaaaccatatttggat 24541421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 40122669 - 40122619
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaa 575  Q
    |||||| ||||||||||||||| || |||||||||| ||||| ||||||||    
T  40122669 aagtggggtcggctacatggatcaagttaagtcataatgttcaatcataaa 40122619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 591
Target Start/End: Original strand, 45374504 - 45374570
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaa 591  Q
    |||||| ||| |||||||||||||||||| | |||| |||||||||  ||| |||| ||||||||||    
T  45374504 aagtggggtcagctacatggattaaattacgccataatgttctatccgaaaccatagttggatccaa 45374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 46148283 - 46148233
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaa 575  Q
    |||||| ||||||||||||||| |||||| | |||| ||||||||||||||    
T  46148283 aagtggggtcggctacatggatcaaattacgccataatgttctatcataaa 46148233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 597
Target Start/End: Complemental strand, 19758131 - 19758070
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||| ||||||   |||| |||||||||||||| ||||||  |||||||||||||    
T  19758131 gctacatggatcaaattataccataatgttctatcataaaccatattgagatccaactcatt 19758070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 597
Target Start/End: Complemental strand, 44571643 - 44571610
Alignment:
Q  564 ttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||| |||||||||||||||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcatt 44571610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 582
Target Start/End: Original strand, 45486876 - 45486933
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatt 582  Q
    |||||| | ||||||||||||| |||||| | |||| |||||||||||||| ||||||    
T  45486876 aagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatatt 45486933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 586
Target Start/End: Original strand, 52927875 - 52927936
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttgga 586  Q
    |||||| ||||||||||||||| |||||| | |||| |||||| || |||| ||||||||||    
T  52927875 aagtggggtcggctacatggatcaaattatgccataatgttctgtcgtaaaccatatttgga 52927936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 3e-69; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 43491563 - 43491318
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||| || |  |||||||||||| ||    
T  43491563 aagtggggtcggctacatggatgaaattacatcatagtgttctatcataaatcatatttggatccaacttattgacctctaaa--ttctttctaatggtt 43491466  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||  ||| | | |||| ||||||||    
T  43491465 tctcttataattttcctaggtcttcctctacctcttttgacctgactctcctccatctgatcaactcttcttacgacggcatctacgggtc-ttctctct 43491367  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  ||||||||||||| |||| ||||||||    
T  43491366 acatgcccaaaccatctaagcctattttctaccaatttttatactatag 43491318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 2885749 - 2885994
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||||   ||||||||||||||||||| ||||||||| |||||||||||||||  || |  |  ||||||||| ||    
T  2885749 aagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcattgaccactaaa--tcatttctaatggtt 2885846  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||| ||  ||| | | | || ||||||||    
T  2885847 tctcttatagttttcctaggtcttcttctacctcttttgacctgactctcctccatctgatctactcttcgtacaacggcatctacggatc-ttctctct 2885945  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  2885946 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 2885994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 12841302 - 12841547
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| || |||||||| |||||||||||||| || |  | |||||||||| ||    
T  12841302 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcattgacctctaaa--tcctttctaatggtt 12841399  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  12841400 tctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 12841498  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  12841499 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 12841547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 46355883 - 46356128
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||||||| |  | |||||||||| ||    
T  46355883 aagtggggtcggctacatggatcaaatgatggcatagtgttctatcatacaccagatttggatccaactcattgacctttaaa--tcctttctaatggtt 46355980  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||| | ||||||||||||||| ||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||||||| | |  ||| ||||||||    
T  46355981 tctttaatagttttcctaggttttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacaacatctacgtgtc-ttctctct 46356079  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| |||   |||||||||||||||||||||||||||    
T  46356080 acatgcccaaaccatctaaacctattttctaccaacttttctactatag 46356128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 34869668 - 34869430
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||||||| |    
T  34869668 gtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttctctaa 34869571  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||||||||||||||| |||||| ||  |||||||| ||||  |||||||||||||||| ||  ||||| | |||| |||||||| ||||||    
T  34869570 tagttttcctaggtcttcctctacctcttttaacttgactctccaccattggatctactcttcttaccacggcatttacgggtc-ttctctctacatgcc 34869472  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||||||||||||||    
T  34869471 caaaccatctaagcctattttctaccaacttttctactatag 34869430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 44855201 - 44855444
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||  |||||| | |||||||||  |||||||| || ||||||||||||||||||||||| || |  ||  |||||||| ||    
T  44855201 aagtggggtcggctacatggaccaaattacgccatagtgtt--atcataaaccaaatttggatccaactcattgacctctaaatctt--ttctaatggtt 44855296  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||| |||  ||| | | |||| ||||||||    
T  44855297 tctctaatagttttcctaggtcttcctctacttcttttaacttgactctcctccatttgatctactcttcttatgacggcatctacgggtc-ttctctct 44855395  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  44855396 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 44855444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 11594215 - 11593970
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  11594215 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 11594118  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| |   ||| | | |||| ||||||||    
T  11594117 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccatggcatctacgggtc-ttctctct 11594019  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| |||   |||||||||||||||||||||||||||    
T  11594018 acatgcccaaaccatctaaccgtattttctaccaacttttctactatag 11593970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 557 - 773
Target Start/End: Original strand, 13859067 - 13859280
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||| || |  | |||||||||| ||||||| |||||||||||||||||||||||||     
T  13859067 catagtgttctatcataaaccaaatttggatccaactcattggcctctaaa--tcctttctaatggtttctctaatagttttcctaggtcttcctctacc 13859164  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    |||| | ||  ||||||||||||| ||||||||||||||||||||| ||| | | |||| |||||||| |||||||||| ||| ||||  ||||||||||    
T  13859165 tcttctaacttgactctcctccatttgatctactcttcttacgacagcatctacgggtc-ttctctctacatgcccaaaccatctaagcctattttctac 13859263  T
Q  757 caacttttctactatag 773  Q
    |||||||||||||||||    
T  13859264 caacttttctactatag 13859280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 35906228 - 35906473
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||||  | |  | |||||||||| ||    
T  35906228 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctcgaaa--tcctttctaatggtt 35906325  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| |||| |||||||||||| ||  ||| | | |||| ||||||||    
T  35906326 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatatgatatactcttcttaccacggcatctacgggtc-ttctctct 35906424  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  35906425 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 35906473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 39906399 - 39906642
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||| |||||||||  | ||| | |||||||||| ||    
T  39906399 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcattgacc--tctaaatcctttctaatggtt 39906496  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||  ||||||||| ||||||||||||||||| || |||| |   |||| ||||||||    
T  39906497 tctctaatagttttcctaggtcttcctctacctcttttaacttga--ctcctccatttgatctactcttcttaccacgacatctatgggtc-ttctctct 39906593  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  39906594 acatgcccaaatcatctaagcctattttctaccaacttttctactatag 39906642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 43281929 - 43281684
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||| || |  ||  |||||||| ||    
T  43281929 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatggtt 43281832  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  43281831 tctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtc-ttctctct 43281733  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  43281732 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 43281684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 49029531 - 49029286
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  49029531 aagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 49029434  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||| || |||||| ||  ||| | | |||| ||||||||    
T  49029433 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctattcgtcttaccacggcatctacgggtc-ttctctct 49029335  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  49029334 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 49029286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 525 - 772
Target Start/End: Original strand, 31682629 - 31682873
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| || || ||||||||| |||||||||| || |  | |||||||||| ||    
T  31682629 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcattgacctctaaa--tcctttctaatggtt 31682726  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||| | ||  ||||||||||||| |||||||||||||||| |||  ||| | | |||| ||||||||    
T  31682727 tctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttgatctactcttcttatgacggcatctacgggtc-ttctctct 31682825  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactata 772  Q
     ||| |||||| ||| ||||  ||||||||||||||||||||||||||    
T  31682826 acatacccaaaccatctaagcctattttctaccaacttttctactata 31682873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 37618200 - 37617954
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| |   ||||||||||||||||| | || |||||||||||||| |||||||| || |  | |||||||||| ||    
T  37618200 aagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttattgacctctaaa--tcctttctaatggtt 37618103  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  37618102 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 37618004  T
Q  725 tcatgcccaaatcatataaggtta-ttttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  || |||||||||||||||||||||||||    
T  37618003 acatgcccaaaccatctaagcctatttttctaccaacttttctactatag 37617954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 525 - 779
Target Start/End: Complemental strand, 15682429 - 15682178
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||| |||||||| || |  | |||||||||||||    
T  15682429 aagtggggttggctacatggatcaaagtacgccatagtgttctatcataaatcatatttggatccaacttattgacctctaaa--tcctttctaatgatt 15682332  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||||||||||||||| || ||| || |||||||||  |||| ||||| || ||||||||||||||||||||  ||| |   | || ||||||||    
T  15682331 tctcttatagttttcctaggtttttctccacctcttttgacttgactttcctcaatttgatctactcttcttacgacggcatctatggatc-ttctctct 15682233  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatagttgtca 779  Q
     | |||| ||| ||| ||||  ||||| ||||||||||||||||||||| |||||    
T  15682232 acctgcctaaaccatctaagcctatttcctaccaacttttctactatagatgtca 15682178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 45836509 - 45836752
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| |||||||||||||||||||||||||  | ||| | |||||||||| ||    
T  45836509 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaatggtt 45836606  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||| |||||||||| |||||||  ||  | |||  |||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  45836607 tctctaatagttgtcctaggtctccctctac--ctcataacctaactctcctccatttgatctactcttcttacaacggcatctacgggtc-ttctctct 45836703  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  45836704 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 45836752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 6375123 - 6374878
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| |  | |||||||||||||||| |||||| || |  |||||||||||| ||    
T  6375123 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacactaaatttggatccaactcactgacctctaaa--ttctttctaatggtt 6375026  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||| ||||||||||| |||||| ||  || |||||| ||| |||||||| |||||||| ||| ||| | | |||| ||||||||    
T  6375025 tctctaatagttttcctagatcttcctctacctcttttaacttgattctcctacatttgatctacccttcttaccacagcatctactggtc-ttctctct 6374927  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||| |||| ||| ||||  |||||||||||||||||||||||||||    
T  6374926 acatgctcaaaccatctaagcctattttctaccaacttttctactatag 6374878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 22349875 - 22349630
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| |||||||||| |||| | | |||||| |||||||||| | || |||||||||||||| ||||||||||| |  | |||| ||||| ||    
T  22349875 aagtggggtcgactacatggatcaaatgacgccatagtattctatcatataccaaatttggatccaacttattgacctttaaa--tcctttttaatggtt 22349778  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||| ||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| |  ||| || | |||| ||||||||    
T  22349777 tctctaatagttttcctagttcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccatgacaattacgggtc-ttctctct 22349679  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||| ||| ||| ||||  |||||||||||||||||||||||||||    
T  22349678 acatgccaaaaccatctaagcctattttctaccaacttttctactatag 22349630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 33349840 - 33350078
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | |  |||||||||||  ||| | || ||||||||||||||||||||||| || |  |  ||||||||| ||||||| |    
T  33349840 gtcggctacatggatcaaatgacgctatagtgttctactatacaccaaatttggatccaactcattgacctctaaa--tcatttctaatggtttctctaa 33349937  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| |||||||| ||||||    
T  33349938 tagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctctacatgcc 33350036  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  ||||||||| |||||||||||||||||    
T  33350037 caaaccatctaagcctattttctagcaacttttctactatag 33350078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 525 - 701
Target Start/End: Complemental strand, 7273355 - 7273181
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| ||||||||| | ||||||||| |||||||| ||||||||||||||||| |  |  ||  |||||||| ||    
T  7273355 aagtggggtcggctacatggatcaaattacgtcatagtgctatatcataaaccatatttgaatccaactcattgacctctgaatatt--ttctaatggtt 7273258  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||  ||||||||| | ||||||    
T  7273257 tctcttatagttttcataggtcttcctctacctcttttgacctgactctcctccatccaatctactctacatacgac 7273181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 525 - 771
Target Start/End: Complemental strand, 36652247 - 36652004
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||| |||||||||||||| |  |  | |||||||||| ||    
T  36652247 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggattcaactcattgacctctgaa--tcctttctaatggtt 36652150  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  |||| ||||| || ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  36652149 tctctaatagttttcttaggtcttcctctacctcttttaacttgactatcctctatttgatctactcttcttaccacggcatctacgggtc-ttctctct 36652051  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactat 771  Q
     |||||  ||| ||| ||||  |||||||||||||||||||||||||    
T  36652050 acatgctgaaaccatctaagcctattttctaccaacttttctactat 36652004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 29650639 - 29650394
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | | ||||||||||||| ||| |||||||||||| ||||||||||||| || |  ||  |||||||| ||    
T  29650639 aagtggggtcggctacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcattgacctctaaatctt--ttctaatggtt 29650542  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| ||||| ||||| ||| |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  29650541 tctcgaatggttttcttaggttttcctttacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtc-ttctctct 29650443  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  ||||||||||||| |||||||||||||    
T  29650442 acatgtccaaaccatctaagcctattttctaccaatttttctactatag 29650394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 536 - 772
Target Start/End: Original strand, 35559031 - 35559264
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagt 635  Q
    ||||||||||| |||| | |  ||| ||||||| ||||||  | ||||||||||||||||||||||| || |  ||  |||||||| ||||||| |||||    
T  35559031 gctacatggatcaaatgatgctataatgttctaccataaactaaatttggatccaactcattgacctctaaatctt--ttctaatggtttctctaatagt 35559128  T
Q  636 tttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaa 735  Q
    |||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| || |||| |   |||| ||||| ||  ||| |||||    
T  35559129 tttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctaggggtc-ttctcactaaatgtccaaa 35559227  T
Q  736 tcatataaggttattttctaccaacttttctactata 772  Q
    |||| ||||  ||||||||||||||||||||||||||    
T  35559228 tcatctaagcctattttctaccaacttttctactata 35559264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 525 - 662
Target Start/End: Original strand, 40979955 - 40980090
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||  | ||| |  ||||||||  ||    
T  40979955 aagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcttttctaatagtt 40980052  T
Q  625 tctcttatagttttcctaggtcttcctctacttctttt 662  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  40980053 tctcttatagttttcctaggtcttcctctacctctttt 40980090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 626 - 773
Target Start/End: Complemental strand, 33073108 - 33072962
Alignment:
Q  626 ctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctctt 725  Q
    |||| ||||||||||||||||||||||||| |||||| ||  |||||| |||||| ||||||||||||||||| || |||| | | |||| ||||||||     
T  33073108 ctctgatagttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctactcttcttaccacgacatctacgggtc-ttctctcta 33073010  T
Q  726 catgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  33073009 catgcccaaatcatctaagcctattttctaccaacttttctactatag 33072962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 580 - 773
Target Start/End: Complemental strand, 31005423 - 31005233
Alignment:
Q  580 atttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctcca 679  Q
    |||||||||||||||||||| || |  |  | ||||| |||| ||||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||    
T  31005423 atttggatccaactcattgatctctgaa--tcctttcaaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctcca 31005326  T
Q  680 tctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    | ||||||||||||||||| ||  ||| | | |||| |||||||| |||||||||| ||| |||   |||||||||||||||||||||||||||    
T  31005325 tttgatctactcttcttaccacggcatctacgggtc-ttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactatag 31005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 540 - 773
Target Start/End: Original strand, 36869286 - 36869516
Alignment:
Q  540 catggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttc 639  Q
    ||||||| |||| | | |||||||||||||||||||||| ||||| ||| ||||||||||| | || |  | |||||||||| ||||| | |||||||||    
T  36869286 catggatcaaatgacgccatagtgttctatcataaatcaaatttgaatctaactcattgacatctaaa--tcctttctaatggtttctttaatagttttc 36869383  T
Q  640 ctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcat 739  Q
    | |||||||||||||| | || | ||  ||||||||||||| |||||||||||||||  |||| ||| | | |||||| |||||| |||| ||||| |||    
T  36869384 ccaggtcttcctctacctattctaacttgactctcctccatttgatctactcttcttctgacagcatctacgggtctt-ctctctacatgaccaaaccat 36869482  T
Q  740 ataaggttattttctaccaacttttctactatag 773  Q
     |||   |||||||||||||||||||||||||||    
T  36869483 ctaaacctattttctaccaacttttctactatag 36869516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 525 - 701
Target Start/End: Original strand, 31681047 - 31681218
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| |||||||| |||||||||||  ||||||||||||||||||||||||| |  ||| | |||||||||| ||    
T  31681047 aagtggggtcggctacatggatcaaattacgtcatagtattctatcataagccatatttggatccaactcattgaccct--taaatcctttctaatggtt 31681144  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    ||||   || ||||||||||||| ||||||| | |||| | | ||||||| ||||| ||||| ||||||||||||||    
T  31681145 tctc---taattttcctaggtctccctctacctgttttaaactgactctcttccatttgatcaactcttcttacgac 31681218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 532 - 706
Target Start/End: Complemental strand, 23404665 - 23404493
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||||||| | |||| ||||||   |||| |||||||||||| | |||||||||||| |||||||||| ||  |||| ||  || ||||| ||||| |||    
T  23404665 gtcggctatacggataaaattacaccataatgttctatcatacaccatatttggatcaaactcattgatct--ataaattaattgtaatggtttctttta 23404568  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacat 706  Q
    || ||||||||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||| ||| ||||    
T  23404567 taattttcctaggtcttcttctacctcttttgacctgactctcctccatttgatctactcttcttatgacgacat 23404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 562 - 773
Target Start/End: Complemental strand, 36136982 - 36136774
Alignment:
Q  562 tgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatga-tttctcttatagttttcctaggtcttcctctacttctt 660  Q
    |||||||||||||| ||||||||||||||| ||||| || | || |   |||||| ||  | |||||||||||||||| |||||||||||||||||||||    
T  36136982 tgttctatcataaaccatatttggatccaattcattaacatctaaa---tctttccaaatagtttctcttatagtttttctaggtcttcctctacttctt 36136886  T
Q  661 ttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaac 760  Q
     ||| | |||||||||||||||||||| |||||| ||| ||||||| |  ||||  ||||||||  |||||||||  |  ||||  |||||||||||| |    
T  36136885 ctgatctgactctcctccatctgatctgctcttcgtactacaacatctataggt-attctctctatatgcccaaacaacctaagactattttctaccatc 36136787  T
Q  761 ttttctactatag 773  Q
    |||||||||||||    
T  36136786 ttttctactatag 36136774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 532 - 662
Target Start/End: Complemental strand, 38900205 - 38900077
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | |||||||||| |||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||||||| |    
T  38900205 gtcggctacatggatcaaatgacgccatagtgttcaatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttctctaa 38900108  T
Q  632 tagttttcctaggtcttcctctacttctttt 662  Q
    |||||||||||||||||||||||| ||||||    
T  38900107 tagttttcctaggtcttcctctacctctttt 38900077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 525 - 735
Target Start/End: Original strand, 28627960 - 28628167
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttt-ctaatgat 623  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||| || ||||| |||||||||||| | || || |   ||||| |||||  |    
T  28627960 aagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaa---tctttcctaatagt 28628056  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    ||||||||||||||| |||||||||||||||| |||| |||   |||| ||||||||| |||||||||| ||||| |||  || | ||||| |||||||     
T  28628057 ttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactctccttactacataatctacaggt-tttctctt 28628155  T
Q  724 ttcatgcccaaa 735  Q
    | ||||||||||    
T  28628156 tacatgcccaaa 28628167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 525 - 706
Target Start/End: Complemental strand, 1011301 - 1011123
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| ||||||   |||| ||||||||| |||| |||||| |||||||| ||||| ||||||| |  ||  | ||||| |||    
T  1011301 aagtggggtcggctacatagatcaaattacaccataatgttctatcctaaaccatatt-ggatccaaatcattaacctttaaatatt--tcctaataatt 1011205  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacat 706  Q
    ||||| ||| |||| |||||||||||||||| |||||||| | |||||||||  |||||||||||||||| ||| |||||||    
T  1011204 tctctcataatttttctaggtcttcctctacctcttttgatctgactctcctttatctgatctactcttcgtactacaacat 1011123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 38607247 - 38607014
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||  | | ||||||||||||||| ||| |||||||||||||||||||||||||  | ||| | ||||||||||       
T  38607247 aagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacc--tctaaatcctttctaatg--- 38607153  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
             |||||| ||||||||||||| | |||| | ||  ||||||||||||| |||||||||||||| || ||  ||| | | |||| ||||||||    
T  38607152 ---------gttttcttaggtcttcctctccctcttctaacgtgactctcctccatttgatctactcttctaacaacggcatctacgggtc-ttctctct 38607063  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||| ||||||||||||    
T  38607062 acatgtccaaaccatctaagcctattttctaccaacctttctactatag 38607014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 532 - 698
Target Start/End: Original strand, 24598221 - 24598385
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | || | | |||||||| ||||||||||||||| |||||||||||||| || |  ||  |||||||| ||||||  |    
T  24598221 gtcggctacatggatcaaatgatgccaaaatattctatcaaaaatcatatttggattcaactcattgacctctaaatctt--ttctaatggtttctcgaa 24598318  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    |  ||||| ||||||||||||||| |||||| ||| ||||| ||| ||| |||||||||||||||||    
T  24598319 tgattttcttaggtcttcctctacctcttttaacctgactcaccttcatttgatctactcttcttac 24598385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 536 - 655
Target Start/End: Complemental strand, 45601720 - 45601603
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatag 634  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||| | || |   || |||||| ||||| ||||||||||||    
T  45601720 gctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctct---agatctttcttaatggtttctcttatag 45601624  T
Q  635 ttttcctaggtcttcctctac 655  Q
    |||| ||||||||||||||||    
T  45601623 tttttctaggtcttcctctac 45601603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 525 - 652
Target Start/End: Original strand, 9210731 - 9210856
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||||| | |||| |||| ||||||||| ||||||||||||||||||||| |||  | ||| || || ||||   ||    
T  9210731 aagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcattaacc--tctaaatttttcctaaaagtt 9210828  T
Q  625 tctcttatagttttcctaggtcttcctc 652  Q
    ||||||||||||||||||||||||||||    
T  9210829 tctcttatagttttcctaggtcttcctc 9210856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 773
Target Start/End: Complemental strand, 47848912 - 47848684
Alignment:
Q  541 atggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcc 640  Q
    |||||| |||||||  |||| |||||||||||||| |||||||||||||| |||||| | |   | |   |||||| |||  |||||||||||||||| |    
T  47848912 atggatcaaattaaaccataatgttctatcataaaccatatttggatccagctcattaatccccaaa---tctttccaatagtttctcttatagtttttc 47848816  T
Q  641 taggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcata 740  Q
    ||| ||||||||| | |||  ||| | |||| |||||||||||||||||||| ||||  |||  |||| || ||| |||||||  |||||||||| ||      
T  47848815 tagttcttcctctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtc-ttctctcgacatgcccaaaccacc 47848717  T
Q  741 taaggttattttctaccaacttttctactatag 773  Q
    ||||  ||||||| |||| ||||||||||||||    
T  47848716 taagcctattttccaccatcttttctactatag 47848684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 27649035 - 27648958
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||||| | || |||||||||||||||| || |||||||||||||||||||||||    
T  27649035 aagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcattgacct 27648958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 670 - 773
Target Start/End: Complemental strand, 7273151 - 7273049
Alignment:
Q  670 ctctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctact 769  Q
    ||||||||||||||||||||||||| |||| |  ||| | |||||||| |||| | |||||||||| ||| ||||  |||||||||||||||||||||||    
T  7273151 ctctcctccatctgatctactcttcatacggcggcatctacaggtctt-ctctgtacatgcccaaaccatctaagcctattttctaccaacttttctact 7273053  T
Q  770 atag 773  Q
    ||||    
T  7273052 atag 7273049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 532 - 665
Target Start/End: Complemental strand, 44951403 - 44951271
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctc-tt 630  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||| || | ||||||  || ||| |  ||||||| | |||||| ||    
T  44951403 gtcggctacatggatcaaattacgtcatagtgttctatcataaataatatttgaatctaagtaattgac--ttttaaatattttctaaaggtttctcttt 44951306  T
Q  631 atagttttcctaggtcttcctctacttcttttgac 665  Q
     || ||||||||| ||||||||||| |||||||||    
T  44951305 gtaattttcctagatcttcctctacctcttttgac 44951271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 34035181 - 34035255
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattga 599  Q
    |||||| ||||||||||||||| |||| | | |||||||||||||||| || |||||||||||||||||||||||    
T  34035181 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatgaaccatatttggatccaactcattga 34035255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 525 - 593
Target Start/End: Original strand, 28208355 - 28208423
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| |||||||||||||||||    
T  28208355 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaact 28208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 647
Target Start/End: Complemental strand, 48919367 - 48919247
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| |||||||||| |||| | | ||||||| | ||||||||| |||||||||||| ||||||||||||  | ||| |  ||||||||| ||    
T  48919367 aagtggggtcgactacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcattgacc--tctaaatcatttctaatggtt 48919270  T
Q  625 tctcttatagttttcctaggtct 647  Q
    | ||| |||||||||||||||||    
T  48919269 tttctaatagttttcctaggtct 48919247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 557 - 706
Target Start/End: Original strand, 1531420 - 1531567
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    |||| |||||||||  ||| ||||||||| ||||||||||| |||| || |  || || ||||| ||||  |||||||||||  |||||||||||||||     
T  1531420 cataatgttctatcccaaaccatatttgggtccaactcattaacctctaaa--tttttcctaataattttgcttatagtttttttaggtcttcctctacc 1531517  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacat 706  Q
    |||||||| | | |||||||  |||||||||||| ||| ||| |||||||    
T  1531518 tcttttgatctggctctcctttatctgatctactattcgtactacaacat 1531567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 32631819 - 32631742
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||| ||| |||| | | ||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  32631819 aagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcattgacct 32631742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 40415262 - 40415185
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| ||||||||  |||| |||| |||||||| |||||||||||| |||||||| ||||    
T  40415262 aagtggggtcggctacatggatcaaattaagctatagggttcaatcataaaacatatttggatcaaactcattaacct 40415185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 628 - 773
Target Start/End: Original strand, 7189348 - 7189498
Alignment:
Q  628 cttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaac------atttgcaggtctttctc 721  Q
    ||||||||||| |||||||||||||||| |||| | |   ||||||||||||||||||||||||||| ||| |||||      || |   | | ||||||    
T  7189348 cttatagtttttctaggtcttcctctacatcttctaatatgactctcctccatctgatctactcttcatactacaactacaacatctatcgat-tttctc 7189446  T
Q  722 tcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||| |||||||||| ||  |||| ||||||||||||| ||||||||||||||    
T  7189447 tctacatgcccaaaccacctaagcttattttctaccatcttttctactatag 7189498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 593
Target Start/End: Original strand, 30814152 - 30814220
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||||||||||||| |||||| || ||| |||||||||||||| ||||||| |||||||||    
T  30814152 aagtggggtcggctacatggatcaaattacgtgataatgttctatcataaaacatatttcgatccaact 30814220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 597
Target Start/End: Original strand, 36101816 - 36101876
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||| |||||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  36101816 ctacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcatt 36101876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 594
Target Start/End: Original strand, 36239833 - 36239892
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactc 594  Q
    |||||||||||| |||||| | |||| |||||||||||||| ||||||||||||||||||    
T  36239833 ggctacatggatcaaattacgccataatgttctatcataaagcatatttggatccaactc 36239892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 602
Target Start/End: Complemental strand, 21078165 - 21078095
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    ||||||||||||||| |||| | | |||| |||||||||||| | || |||||||||||||||||||||||    
T  21078165 gtcggctacatggatcaaatgacgccataatgttctatcatacaccaaatttggatccaactcattgacct 21078095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 600
Target Start/End: Complemental strand, 31859117 - 31859055
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgac 600  Q
    |||||| || |||||| ||||||||||||||| |||||| | |||||||||||||||||||||    
T  31859117 tacatgaatcaaattatgtcatagtgttctattataaattaaatttggatccaactcattgac 31859055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 37976480 - 37976418
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||  |||| || |||| |||||||||||||| |||||||||||||||||||||    
T  37976480 ggctacatggatctaatttagccataatgttctatcataaaccatatttggatccaactcatt 37976418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 602
Target Start/End: Complemental strand, 35922492 - 35922431
Alignment:
Q  541 atggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| ||||||||| ||||    
T  35922492 atggatcaaattaggtcataatgttctatcataaatcatatttagattcaactcattaacct 35922431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 42969953 - 42969876
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| ||||||    ||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  42969953 aagtggggtcggctacatggatcaaattatacgataatgttcaatcataaaccatatttggatccaactcattaacct 42969876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 47852342 - 47852265
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||| ||| | || |||||||||||||||||| ||||    
T  47852342 aagtggggtcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcattaacct 47852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 525 - 580
Target Start/End: Complemental strand, 48515530 - 48515475
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcata 580  Q
    |||||| |||||||||| |||| |||||| |||||||||| |||||||||||||||    
T  48515530 aagtggggtcggctacacggatcaaattacgtcatagtgtactatcataaatcata 48515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 649
Target Start/End: Original strand, 21517430 - 21517529
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtct 647  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||| ||| |  | | ||| |  ||| ||||  |||||||||||||||| ||||||||    
T  21517430 aaattacgtcataatgttatatcataaatcatatttggatccaacttattaa--tctctaaatattttttaatagtttctcttatagtttttctaggtct 21517527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 695
Target Start/End: Complemental strand, 32631724 - 32631663
Alignment:
Q  634 gttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttct 695  Q
    |||||| ||||||||||||||| |||||| ||| |||| |||||||| ||||| ||||||||    
T  32631724 gttttcttaggtcttcctctacctcttttaacctgactatcctccatttgatccactcttct 32631663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 602
Target Start/End: Complemental strand, 33073176 - 33073107
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||||||||||| |||| | |||||| |||| ||| ||| | || |||||||||||||||||||||||    
T  33073176 tcggctacatggatcaaatgacgtcatattgttttattatacaccaaatttggatccaactcattgacct 33073107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 773
Target Start/End: Complemental strand, 43282568 - 43282418
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctct--acttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttct 720  Q
    |||||||||||||||| ||||||| ||||||  || |||| ||| | |||| |||||||||| ||||||||| ||| | |||  || |||| ||| ||||    
T  43282568 tttctcttatagtttttctaggtcatcctctacacctcttgtgatctgactatcctccatct-atctactctccttcctacagaatctgcaagtc-ttct 43282471  T
Q  721 ctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||||||||| |||  ||||  || |||| ||| |||||||||||||||    
T  43282470 ctctacatgcccaattcacctaagcctagtttccaccgacttttctactatag 43282418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 33103181 - 33103109
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| |||||| |  || ||||||||||||||| ||||||  ||| |||||||||    
T  33103181 aagtggggtcggctacatggatcaaattacgctatggtgttctatcataaaccatattccgattcaactcatt 33103109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 535 - 583
Target Start/End: Original strand, 44401164 - 44401212
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatattt 583  Q
    |||||||||||| |||||| |||||| |||||||||||||| |||||||    
T  44401164 ggctacatggatcaaattacgtcataatgttctatcataaaacatattt 44401212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 597
Target Start/End: Complemental strand, 1569270 - 1569199
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||| |||| |||||| ||| |||||| | | || |||||||||||||| ||||||| |||||||||||||    
T  1569270 agtggggtcgactacatcgatcaaattacgccgtaatgttctatcataaaccatattttgatccaactcatt 1569199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 583
Target Start/End: Original strand, 26332908 - 26332958
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatattt 583  Q
    |||||||||||||| |||||| |||||| | |||||||||||| |||||||    
T  26332908 tcggctacatggatcaaattacgtcataatattctatcataaaccatattt 26332958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 14057733 - 14057656
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| || |||||||||||| ||||||   |||| |||||||||||||| |||||||| ||| ||| |||| ||||    
T  14057733 aagtggggttggctacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacct 14057656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 14367761 - 14367684
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| || |||||||||||| ||||||   |||| |||||||||||||| |||||||| ||| ||| |||| ||||    
T  14367761 aagtggggttggctacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacct 14367684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 27893597 - 27893662
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||| || |||||| | |||| |||||||||||||| ||||||| | |||| ||||||    
T  27893597 gtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcatt 27893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 34341429 - 34341494
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||| | | |||||| | |||| |||||||||||||| |||||||  ||||||||||||    
T  34341429 gtcggctacattggtcaaattacgccataatgttctatcataaaccatatttcaatccaactcatt 34341494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 533 - 594
Target Start/End: Original strand, 34926557 - 34926618
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactc 594  Q
    |||||||||||||| |||||| | |||   ||||||||||||| ||||||| ||||||||||    
T  34926557 tcggctacatggatcaaattacgccattaagttctatcataaaccatatttcgatccaactc 34926618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 593
Target Start/End: Complemental strand, 42187696 - 42187628
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcat-agtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||||||||||||| |||||| | ||| | |||||||||||||| || ||||||||||||||    
T  42187696 aagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaact 42187628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 4e-62; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 38685222 - 38684977
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | |||| |||||||||||||| |||||||||||||||||||||||||| || |  | |||||||||| ||    
T  38685222 aagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctctaaa--tcctttctaatggtt 38685125  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||  ||| | | |||| ||||||||    
T  38685124 tctctaatagttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacgacggcatctacgggtc-ttctctct 38685026  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  38685025 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 38684977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 4496639 - 4496394
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  4496639 aagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 4496542  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  4496541 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 4496443  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||| ||||||||||||||    
T  4496442 acatgcccaaaccatctaagcctattttctaccagcttttctactatag 4496394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 525 - 774
Target Start/End: Original strand, 12492411 - 12492657
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||| || |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  12492411 aagtggggtcggctacatgcatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 12492508  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||  ||  ||| | | |||| ||||||||    
T  12492509 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaacacggcatctacgggtc-ttctctct 12492607  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatagt 774  Q
     |||||||||| ||| ||||  ||||||||||||||||||||||||||||    
T  12492608 acatgcccaaaccatctaagcctattttctaccaacttttctactatagt 12492657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 1287606 - 1287851
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| || | | | |||||||| |||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  1287606 aagtggggtcggctacatggatcaactgacgccatagtgtactatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 1287703  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | |  ||| ||||||||    
T  1287704 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgtgtc-ttctctct 1287802  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  1287803 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 1287851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 525 - 774
Target Start/End: Complemental strand, 10639557 - 10639313
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  10639557 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 10639460  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||  ||||||||| || |||||||||||||| |   ||| | |||||| ||||||||    
T  10639459 tctctaatagttttcctaggtcttcctctacctcttttaacttga--ctcctccatttgttctactcttcttaccatggcatctacaggtc-ttctctct 10639363  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatagt 774  Q
     ||||||||| |||| ||||  ||||||||||||||||||||||||||||    
T  10639362 acatgcccaattcatctaagcctattttctaccaacttttctactatagt 10639313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 24178765 - 24178520
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| |||| | | ||||||||||||||||| |  | |||||||||||||||||||| || || |  | |||||||||| ||    
T  24178765 aagtggggtcggctacatagatcaaatgatgccatagtgttctatcatacactaaatttggatccaactcattgaactctaaa--tcctttctaatggtt 24178668  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| |||||||     
T  24178667 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctcc 24178569  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  24178568 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 24178520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 28976886 - 28977131
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||| || |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||| ||||| ||    
T  28976886 aagtggggtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttataatggtt 28976983  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| |||||||| |||||||| ||  ||| | | |||| ||||||||    
T  28976984 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctacccttcttaccacggcatatacgggtc-ttctctct 28977082  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||| |||| ||| ||||  |||||||||||||||||||||||||||    
T  28977083 acatgcacaaaccatctaagcctattttctaccaacttttctactatag 28977131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 14665967 - 14665724
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| |||||| | || |||  ||||||||||| ||||||||||||||||||||||||  || ||| ||||| |||||| ||    
T  14665967 aagtggggtcggctacatagatcaaattacgccagagt--tctatcataaaccatatttggatccaactcattgac--ttctaaattcttcctaatggtt 14665872  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||| ||||||| |||||| ||| |||||| |||||| ||||||||||||||||||||  ||| | | |||| ||||||||    
T  14665871 tctctaatagttttcctaggtctccctctacctcttttaacctgactctgctccatttgatctactcttcttacgacggcatctacgggtc-ttctctct 14665773  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  ||||||||| |||||| ||||||||||    
T  14665772 acatgtccaaaccatctaagcctattttctatcaacttctctactatag 14665724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 20457028 - 20456783
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | |||| |||||||||||| |||| |||| ||| ||||| |||||||| || |  | |||||||||| ||    
T  20457028 aagtggggtcggctacatggatcaaatgacgccataatgttctatcatacatcaaatttagattcaacttattgacctctaaa--tcctttctaatggtt 20456931  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  20456930 tctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 20456832  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||  |||| ||| ||||  |||||||||||||||||||||||||||    
T  20456831 acatgttcaaaccatctaagcctattttctaccaacttttctactatag 20456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 525 - 769
Target Start/End: Original strand, 2075500 - 2075742
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || ||||||||| || |||| | | |||||| |||||||||| | || ||||||||||||||||||||||| || |   | ||||||||| ||    
T  2075500 aagtggggttggctacatgaatcaaatgacgccatagtattctatcatacaccaaatttggatccaactcattgacctctaaatcct-tttctaatggtt 2075598  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||| |||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  2075599 tctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 2075697  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctact 769  Q
     |||||||||| ||| ||||  |||| ||||||||||||||||||    
T  2075698 acatgcccaaaccatctaagcctattgtctaccaacttttctact 2075742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 16347414 - 16347650
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | ||  ||||||||||||||| |||||||| |||||| |||||||||| || |  ||  |||||||| ||||| | |    
T  16347414 gtcggctacatggatcaaatgacgcca--gtgttctatcataaaccatatttgtatccaaatcattgacctctaaatctt--ttctaatggtttctttaa 16347509  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||| | |   ||| | | |||| |||||||| |||| |    
T  16347510 tagttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttgcaaaggcatctacgggtc-ttctctctacatgtc 16347608  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||||||||||||||    
T  16347609 caaaccatctaagcctattttctaccaacttttctactatag 16347650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 525 - 698
Target Start/End: Original strand, 2915523 - 2915693
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||  || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  2915523 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataac-caaatttggatccaactcattgacctctaaa--tcctttctaatggtt 2915619  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||| |||||| |||||||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||    
T  2915620 tctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttac 2915693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 1275519 - 1275274
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | |||||| |||||||||| | | || |||||||| ||||| ||| |||| || |  | |||| ||||| ||    
T  1275519 aagtggggtcggctacatggatcaaatgacgtcataatgttctatcaaacaccaaatttggattcaactgattaacctctaaa--tcctttataatggtt 1275422  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||||| ||||||||||||||||  || || ||  ||||||||||||| ||||||||||||||||| ||  ||||| | | |||| ||||||    
T  1275421 tctctaatagtttttctaggtcttcctctacccctgttaacttgactctcctccatttgatctactcttcttaccacggcatttacggatctt-ctctct 1275323  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  1275322 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 1275274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 3302099 - 3301854
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | | ||||||||||||| ||| |||||||||||||||||||||||||| || |  ||  || ||||| ||    
T  3302099 aagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttataatggtt 3302002  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| || |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||  | |||||| || ||  ||| | | |||| ||||||||    
T  3302001 tctctaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgattcattcttctaacaacggcatctacgggtc-ttctctct 3301903  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  3301902 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 3301854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 525 - 706
Target Start/End: Original strand, 26884716 - 26884894
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatattt-ggatccaactcattgacctttataagttctttc-taatga 622  Q
    |||||| ||||||||||||||| |||||  ||| ||||||||||||||||||||||||| |||||| || |||| |||| || |   |||||| ||||      
T  26884716 aagtggggtcggctacatggatcaaattgcgtcgtagtgttctatcataaatcatattttggatccgacccattaacctctaaa---tctttcctaatag 26884812  T
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacat 706  Q
    ||| |||||  |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26884813 tttttctta--gttttcctagctcatcctctacctcttttgacccgactctcctccatctgatctactcttcttacgacaacat 26884894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 525 - 693
Target Start/End: Original strand, 13561413 - 13561579
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| |||| ||||||||||||||||||||  | ||| |  ||||||||| ||    
T  13561413 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcattgacc--tctaaatcttttctaatggtt 13561510  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactctt 693  Q
    ||||  || |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||    
T  13561511 tctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactctt 13561579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 535 - 773
Target Start/End: Complemental strand, 34273258 - 34273037
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatag 634  Q
    ||||||||||||  ||| | ||||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||||||| ||||    
T  34273258 ggctacatggatcgaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttctctaatag 34273161  T
Q  635 ttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaa 734  Q
    ||||||||||||||||||||| |||||| ||  |||||||              |||||||||| || |||| |||||||| |||||||| |||||||||    
T  34273160 ttttcctaggtcttcctctacctcttttaacttgactctc--------------ctcttcttaccacgacatctgcaggtc-ttctctctacatgcccaa 34273076  T
Q  735 atcatataaggttattttctaccaacttttctactatag 773  Q
    | ||| ||||  ||||||||||||||||||||| |||||    
T  34273075 accatctaagcctattttctaccaacttttctattatag 34273037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 558 - 701
Target Start/End: Original strand, 38501478 - 38501619
Alignment:
Q  558 atagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctactt 657  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| || |  | |||||||||  ||||| |||||||| |||||||||||| || |  |    
T  38501478 atagttttctatcataaatcatatttggatccaacttattgacctctaaa--tactttctaatagtttcttttatagttctcctaggtcttcatccatct 38501575  T
Q  658 cttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  38501576 cttttgatccgactctcctccatctaatctactcttcttacgac 38501619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 525 - 690
Target Start/End: Complemental strand, 14911427 - 14911264
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | |||||| |||||||| ||||||||||||||||||||||||| |||  | ||| |  ||||||||| ||    
T  14911427 aagtggggtcggctacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaactcattaacc--tctaaatcttttctaatggtt 14911330  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctact 690  Q
    ||||  || |||||| ||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  14911329 tctcgaatggttttcttaggtcttcctctacctcttttaacccgactctccttcatttgatctact 14911264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 525 - 651
Target Start/End: Complemental strand, 29816637 - 29816513
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  29816637 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 29816540  T
Q  625 tctcttatagttttcctaggtcttcct 651  Q
    ||||| |||||||||||||||||||||    
T  29816539 tctctaatagttttcctaggtcttcct 29816513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 536 - 703
Target Start/End: Complemental strand, 28126 - 27961
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatag 634  Q
    |||||||| || |||||| | ||||||||||||||| ||||||||||||||||||||| ||| |||| || |   |||||| ||||  ||||||||||||    
T  28126 gctacatgtatcaaattatgccatagtgttctatcagaaatcatatttggatccaacttattaacctctaaa---tctttcctaatagtttctcttatag 28030  T
Q  635 ttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaa 703  Q
    |||| ||||||||||||| || |||||||| | |||||||   ||||||||||||||||| ||| ||||    
T  28029 tttttctaggtcttcctcaacctcttttgatctgactctcacgcatctgatctactcttcgtactacaa 27961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 5558396 - 5558319
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  5558396 aagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactcattgacct 5558319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 16913917 - 16914021
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | ||| |||||||||| |||| |||||||||||||||||||||||||  | ||| | |||||||||| ||||||| |    
T  16913917 gtcggctacatggatcaaatgacgccatggtgttctatcgtaaaccatatttggatccaactcattgacc--tctaaatcctttctaatggtttctctaa 16914014  T
Q  632 tagtttt 638  Q
    |||||||    
T  16914015 tagtttt 16914021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 597
Target Start/End: Original strand, 418059 - 418133
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||| ||||||||||||||| |||||| | |||| |||||||||||||| || ||||||||||||||||||    
T  418059 ccaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcatt 418133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 600
Target Start/End: Complemental strand, 30213830 - 30213755
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgac 600  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||    
T  30213830 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgac 30213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 773
Target Start/End: Complemental strand, 36215712 - 36215508
Alignment:
Q  556 tcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctac 655  Q
    ||||||||||||||||||| |||| ||||||| ||| | |||||||| || |  || |||  |||| |||||||||||||||||||          ||||    
T  36215712 tcatagtgttctatcataagtcatgtttggattcaattaattgacctctaaatctttttt--aatggtttctcttatagttttcct----------ctac 36215625  T
Q  656 ttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttcta 755  Q
     |||||||||| |||||||||||||| |||||||||||||| | || |||| | |  || ||||| ||| | |||| ||| ||| ||||  ||||| |||    
T  36215624 ctcttttgacctgactctcctccatccgatctactcttctttcaacgacatatacgagt-tttctttctacgtgccgaaaccatctaagcatatttccta 36215526  T
Q  756 ccaacttttctactatag 773  Q
    ||||||||||||||||||    
T  36215525 ccaacttttctactatag 36215508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 525 - 595
Target Start/End: Original strand, 43557860 - 43557930
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactca 595  Q
    |||||| ||||||||||| ||| || |||||||||| |||||||||||||| ||||||| |||||||||||    
T  43557860 aagtggggtcggctacatagatcaacttaagtcataatgttctatcataaaccatatttcgatccaactca 43557930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 651
Target Start/End: Complemental strand, 30588702 - 30588578
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| ||||||||||||||| | || | |||||| |||||||| ||||| ||||||| ||||||||||||| | || |   || |||||| |||  ||    
T  30588702 aagtggagtcggctacatggatcatatcacgtcataatgttctattataaaccatatttcgatccaactcattcatctct---agatctttcttaacaat 30588606  T
Q  624 ttctcttatagttttcctaggtcttcct 651  Q
    ||||||||||||||| ||||||||||||    
T  30588605 ttctcttatagtttttctaggtcttcct 30588578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 32442152 - 32442224
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||  ||| |||||||||||||||||||||    
T  32442152 aagtggagtcggctacatggatcaaattacgccataatgttctatccaaaaccatatttggatccaactcatt 32442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 703
Target Start/End: Original strand, 8082083 - 8082157
Alignment:
Q  629 ttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaa 703  Q
    |||||||||| |||||||||||||||| |||||||| | |||| || | ||||||||||||||| ||||| ||||    
T  8082083 ttatagtttttctaggtcttcctctacctcttttgatctgactatcgttcatctgatctactctccttactacaa 8082157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 773
Target Start/End: Complemental strand, 14749466 - 14749317
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||||||||||| |||||||||||||| | | |  |||   ||||| ||||||||||||| ||||| ||||| |||  ||   |||||||| ||||    
T  14749466 tttctcttatagtttttctaggtcttcctctgcctttagtgatttgactcccctccatctgatcgactctccttacaacagaatccacaggtctt-ctct 14749368  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||| ||||| ||| ||||  || |||||||||| |||||||||||||    
T  14749367 ctacatgtccaaaccatctaagtctagtttctaccaatttttctactatag 14749317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 597
Target Start/End: Complemental strand, 20367150 - 20367076
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||| || ||||| |||||| |||||| |||||| |||| | ||||||| |||||||||||||||||||||    
T  20367150 ccaagtggggttggctatatggatcaaattacgtcataatgttatgtcataaaccatatttggatccaactcatt 20367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 630
Target Start/End: Complemental strand, 28276493 - 28276390
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| ||||||   |||||| ||||||||||||  ||||||| |||||||| |||||||  | ||| |||||||||||| ||    
T  28276493 aagtggagttggctacatggatcaaattacaccatagttttctatcataaacaatatttgaatccaacttattgacc--tctaaattctttctaatggtt 28276396  T
Q  625 tctctt 630  Q
    ||||||    
T  28276395 tctctt 28276390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 597
Target Start/End: Complemental strand, 9235295 - 9235230
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||| |||||| | |||| |||||||||||||| ||||||| |||||| ||||||    
T  9235295 gtcggctacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctcatt 9235230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 14668026 - 14667954
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||| ||||||||| ||||||   |||| |||||||||||||| |||| ||||||||||||||||    
T  14668026 aagtggggtcggttacatggatcaaattacaccataatgttctatcataaaccatacttggatccaactcatt 14667954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 589
Target Start/End: Complemental strand, 18855862 - 18855798
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatcc 589  Q
    |||||| ||||||||||||||| |||||| |  ||| |||||||||||||| |||||||||||||    
T  18855862 aagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatatttggatcc 18855798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 694
Target Start/End: Original strand, 17340500 - 17340630
Alignment:
Q  562 tgttctatcataaatcatatttggatccaactcattgacctttataagttctttct-aatgatttctcttatagttttcctaggtcttcctctacttctt 660  Q
    |||| ||||||||| |||||||||||| |||||||| |||| || |   ||||||| |||  || |  ||||| |||| ||| |||||| |||||   ||    
T  17340500 tgttatatcataaaccatatttggatcaaactcattaacctctaaa---tctttcttaatagttacaattataatttttctaagtcttcatctacccttt 17340596  T
Q  661 ttgacccgactctcctccatctgatctactcttc 694  Q
    |||||| |||||||||||||||||||||||||||    
T  17340597 ttgacctgactctcctccatctgatctactcttc 17340630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 538 - 597
Target Start/End: Complemental strand, 23980186 - 23980127
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||| || || |||||| |||||||||||||| ||||||| |||||||||||||    
T  23980186 tacatggattgaaatatgtcatattgttctatcataaaccatatttagatccaactcatt 23980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 548 - 646
Target Start/End: Original strand, 42504297 - 42504393
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtc 646  Q
    |||||| |||||| |||||||||||||| |||||||||||  |||||||||||   | ||| | |||| || ||| ||||||||||||||| |||||||    
T  42504297 aaattacgtcataatgttctatcataaaccatatttggatataactcattgac--atctaaatcctttttattgacttctcttatagtttttctaggtc 42504393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 583
Target Start/End: Complemental strand, 11675785 - 11675727
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatattt 583  Q
    |||||| ||||||||||||||||||| || | |||| |||||||||||||| |||||||    
T  11675785 aagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatattt 11675727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 692
Target Start/End: Complemental strand, 1525803 - 1525734
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactct 692  Q
    |||||||| ||||||| |||||||| || |||| |||  ||| | |||||||||||||||||||||||||    
T  1525803 tttctcttgtagtttttctaggtctacccctacctctagtgatctgactctcctccatctgatctactct 1525734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 594
Target Start/End: Original strand, 15252771 - 15252840
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactc 594  Q
    |||||| |||||||||||| |||||| ||  ||||| |||||||||||||| | ||||| ||||||||||    
T  15252771 aagtggggtcggctacatgaattaaactacatcataatgttctatcataaaccctatttcgatccaactc 15252840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 668 - 773
Target Start/End: Complemental strand, 43475354 - 43475250
Alignment:
Q  668 gactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttcta 767  Q
    |||| |||||||||||||||||||| ||||| ||||||| | |||||| ||||||||  || |||||| ||  ||||  || |||| |||| ||||||||    
T  43475354 gactatcctccatctgatctactctccttactacaacatctacaggtc-ttctctctgaatacccaaaccacctaagcctagtttccaccatcttttcta 43475256  T
Q  768 ctatag 773  Q
    ||||||    
T  43475255 ctatag 43475250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 536 - 653
Target Start/End: Complemental strand, 6889237 - 6889122
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttt-ctaatgatttctcttatag 634  Q
    |||||||||||||||||| | |||| |||||||||||||| ||||||| |  |||||| ||| | || || |   ||||| |||||  ||||||||||||    
T  6889237 gctacatggattaaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaa---tctttcctaatagtttctcttatag 6889141  T
Q  635 ttttcctaggtcttcctct 653  Q
    |||| ||||| ||||||||    
T  6889140 tttttctaggccttcctct 6889122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 583
Target Start/End: Original strand, 7640542 - 7640592
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatattt 583  Q
    |||||||||||||| |||||| | | ||||||||||||||||| |||||||    
T  7640542 tcggctacatggatcaaattacgccgtagtgttctatcataaaccatattt 7640592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 773
Target Start/End: Original strand, 15489615 - 15489764
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||||| ||||| |||||||||||||| | |||  |||  | ||| |||||||||| ||||||||| ||||  |||| || | ||  || ||||||    
T  15489615 tttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctccttaatacaaaatctacaaatc-ttctct 15489713  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||||||||| ||| |||| | | |||| |||| ||||||||| ||||    
T  15489714 ctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaatag 15489764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 773
Target Start/End: Complemental strand, 28676754 - 28676605
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    ||||||||||||||||  ||||||||| ||||| |||| | | | |||  |||||||||| || || | | |||||||||  ||||  ||||| ||||||    
T  28676754 tttctcttatagtttttataggtcttcttctacctcttgtaatctgacaatcctccatctaatatattatccttacgacataatttaaaggtc-ttctct 28676656  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||||| ||| ||  ||||  ||||||| |||| ||||||||||||||    
T  28676655 ctacatgccgaaaccacctaagactattttccaccatcttttctactatag 28676605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 773
Target Start/End: Original strand, 31636043 - 31636192
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    ||||||| |||||||| |||| |||||| |||  |||  |||   ||||| || |||||| ||||||||| ||||| |||||||   | |||||| ||||    
T  31636043 tttctctaatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatctactctccttactacaacatccacgggtctt-ctct 31636141  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||||||||| ||  ||||  || ||||||||| ||||||||||||||    
T  31636142 ctacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 31636192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 693
Target Start/End: Complemental strand, 31906893 - 31906750
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtct 647  Q
    |||||| |||||||||||| || |||| | |||||||| ||||| | |||||| | ||||  |  ||||||||| ||| || |||| ||||| ||||| |    
T  31906893 aaattatgtcatagtgttcaattataatttatatttgggtccaattaattgacttatata--tcatttctaatggtttttcgtataattttcttaggttt 31906796  T
Q  648 tcctctacttcttttgacccgactctcctccatctgatctactctt 693  Q
    |  ||||||| ||||||| ||| |||| | ||||||||||| ||||    
T  31906795 tattctactttttttgactcgattctcattcatctgatctattctt 31906750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Complemental strand, 6788315 - 6788250
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||| || |||||| |  ||| ||||||||||||||||||||||   |||||||||||    
T  6788315 gtcggctacatgaatcaaattacgctataatgttctatcataaatcatatttcagtccaactcatt 6788250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 698
Target Start/End: Complemental strand, 11675651 - 11675594
Alignment:
Q  641 taggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||||||||||||| |||||||| | |||| |||||| | ||||||||||| |||||    
T  11675651 taggtcttcctctacatcttttgatctgactatcctccctatgatctactctccttac 11675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 606
Target Start/End: Complemental strand, 41808165 - 41808096
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttat 606  Q
    |||||||||| |||  | |||||| |||||||||||| |||||||||  |||||||||||| | ||||||    
T  41808165 ctacatggatcaaacgatgtcataatgttctatcatacatcatatttatatccaactcattaatctttat 41808096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 525 - 770
Target Start/End: Complemental strand, 39708688 - 39708446
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| |||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||| || |  | |||||||||| ||    
T  39708688 aagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctctaaa--tcctttctaatggtt 39708591  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||| |    ||| |||||| |    
T  39708590 tctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttacgacggcatctatgtgtc-ttctctat 39708492  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctacta 770  Q
     ||||| |||| ||| ||||  |||||||||||||||||| |||||    
T  39708491 acatgctcaaaccatctaagcctattttctaccaacttttatacta 39708446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 436484 - 436239
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||| |||||||||||||| || |  | ||||||| || ||    
T  436484 aagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggattcaactcattgacctctaaa--tcctttctagtggtt 436387  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | |||||| ||||||||    
T  436386 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacaggtc-ttctctct 436288  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  436287 acatgcccaaatcatctaagcctattttctaccaacttttctactatag 436239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 4441108 - 4440863
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  4441108 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 4441011  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||| ||| | | |||| ||||||||    
T  4441010 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacagcatctacgggtc-ttctctct 4440912  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
      ||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  4440911 agatgcccaaaccatctaagcctattttctaccaacttttctactatag 4440863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 31959841 - 31960086
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||  ||    
T  31959841 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatagtt 31959938  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  31959939 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 31960037  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  31960038 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 31960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 525 - 771
Target Start/End: Original strand, 48622570 - 48622813
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||||||||||| | | ||||||||||||||||| | || ||||||||| ||||||||||||| || |  ||  |||||||||||    
T  48622570 aagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcattgacctctaaatctt--ttctaatgatt 48622667  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| |||||| || ||||||| ||  ||||| | |||| ||||||||    
T  48622668 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatcttcttttcttaccacggcatttacgggtc-ttctctct 48622766  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactat 771  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||    
T  48622767 acatgcccaaaccatctaagcctattttctaccaacttttctactat 48622813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 52569542 - 52569787
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  52569542 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 52569639  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||| | ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  52569640 tctttaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 52569738  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  52569739 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 52569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 48174120 - 48174365
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||| | | |||| |||| ||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  48174120 aagtggggtctgctacatggatcaaatgacgccataatgttttatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 48174217  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  48174218 tctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 48174316  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  48174317 acatgcccaaatcatctaagcctattttctaccaacttttctactatag 48174365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 26037532 - 26037777
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| |||||||||||||||  ||||| | ||||||||||||||||||| ||||||||||||||||||||| |||| || |   |||||| ||||  |    
T  26037532 aagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattcacctctaaa---tctttcctaatagt 26037628  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    ||||||||| |||||||||||| ||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||  ||||| |||||| |||||||    
T  26037629 ttctcttatggttttcctaggttttcctctgcctcttttaacctgactctcctccatctgatctactcttcttacgacggcatttacaggtc-ttctctc 26037727  T
Q  724 ttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |  |    |||| ||| ||||  |||||||||||||||||||||||||||    
T  26037728 tataatatcaaaccatctaagcctattttctaccaacttttctactatag 26037777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 37798099 - 37797862
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||| ||| |||| | |||||| |||||||||||||| ||||||||||| ||||||||||||  || ||| | |||||||||||||||||| |    
T  37798099 gtcggctacattgatcaaatgacgtcatattgttctatcataaaccatatttggattcaactcattgac--ttctaaatcctttctaatgatttctctaa 37798002  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||| ||||||||||  |||||| ||| ||||||| ||||| ||||||||||||||||||||  ||| | |   || |||||||| |||| |    
T  37798001 tagttttcctagatcttcctcta-atcttttaacctgactctcatccatttgatctactcttcttacgacggcatctacgaatc-ttctctctacatgtc 37797904  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||||||||||||||    
T  37797903 caaaccatctaagcctattttctaccaacttttctactatag 37797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 53708042 - 53707804
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||| ||| |||||| |||| | ||||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||||||| |    
T  53708042 gtcgactaaatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttctctaa 53707945  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||| ||||||||||||| |||||| ||  |||| |||||||| |||| |||||||||||| ||  ||| | | |||| |||||||| ||||||    
T  53707944 tagttttcctcggtcttcctctacctcttttaacttgactatcctccatttgatatactcttcttaccacggcatctacgggtc-ttctctctacatgcc 53707846  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||||||||||||||    
T  53707845 caaaccatctaagcctattttctaccaacttttctactatag 53707804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 56375538 - 56375300
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | ||||||||||||||||||| | || |||||||||||||||||| |||| || |  | |||||||||| ||||||| |    
T  56375538 gtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattcacctctaaa--tcctttctaatggtttctctaa 56375441  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||| ||||||||||||||| |||||| ||  ||||||||||||| | ||||||||||||||| ||  ||| | | |||| |||||||| ||||||    
T  56375440 tagttttcttaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacggcatctacgggtc-ttctctctacatgcc 56375342  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  | ||||||||||||||||||| |||||    
T  56375341 caaaccatctaagcctgttttctaccaacttttctattatag 56375300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 533 - 773
Target Start/End: Complemental strand, 33227456 - 33227219
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttat 632  Q
    |||||||||||||| |||| | ||||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||| ||| ||    
T  33227456 tcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttttctaat 33227359  T
Q  633 agttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccc 732  Q
    ||||||||||||||||| ||||| |||||| ||  ||||||| ||||| ||||||||||||||||  ||  ||| | | |||| |||||||| |||||||    
T  33227358 agttttcctaggtcttcatctacctcttttaacttgactctcttccatttgatctactcttcttaacacggcatctacgggtc-ttctctctacatgccc 33227260  T
Q  733 aaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||  || ||||  |||||||||||||||||||||||||||    
T  33227259 aaacaatctaagcctattttctaccaacttttctactatag 33227219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 533 - 773
Target Start/End: Complemental strand, 1793709 - 1793470
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc--taatgatttctctt 630  Q
    ||||||||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || |  || | |   ||||| ||||||||    
T  1793709 tcggctacatgaatcaaattacgtcatagtgctctatcataaatcatatttggatccaactcattgacctctaaatcttttctaattaatggtttctctt 1793610  T
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgc 730  Q
    |||||||| | ||||||| |||||| ||||||||  ||||||  |||||||||||||||| |||||||||| ||||   || ||||| |||||| ||||     
T  1793609 atagtttttcgaggtctttctctacctcttttgatacgactc--ctccatctgatctactattcttacgacgacatcaacaagtctt-ctctctacatgt 1793513  T
Q  731 ccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||||| ||| |||| ||||||||||||||||||| ||||||||    
T  1793512 ccaaaccatctaagcttattttctaccaacttttttactatag 1793470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 527 - 773
Target Start/End: Original strand, 33190877 - 33191120
Alignment:
Q  527 gtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttc 626  Q
    |||| ||||||||||||| | |||| | ||||||||||||||||||| | || |||||||| |||||||||||||| || |  | |||||||||| ||||    
T  33190877 gtggggtcggctacatgggtcaaatgacgtcatagtgttctatcatacaccaaatttggattcaactcattgacctctaaa--tcctttctaatggtttc 33190974  T
Q  627 tcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttc 726  Q
    ||| ||||||||||||||||||||||||| |||||| ||  |||||| |||||| |||||||| |||||||  ||  ||| | | |||| |||||||| |    
T  33190975 tctaatagttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctacccttcttaacacggcatctacgggtc-ttctctctac 33191073  T
Q  727 atgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||||  || ||||  |||||||||||||||||||||||||||    
T  33191074 atgcccaaacaatctaagtctattttctaccaacttttctactatag 33191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 538 - 772
Target Start/End: Original strand, 20601692 - 20601917
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttt 637  Q
    |||||| || |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||         |||||||||| |||||||||||||||    
T  20601692 tacatgaatcaaattacgtcataatgttctatcataaatcatatttgaatccaactcattgacctga-------ctttctaatggtttctcttatagttt 20601784  T
Q  638 tcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatc 737  Q
    ||  |||||||| ||||| |||||||||| ||||||||||||||| || |||||||||||| ||  ||| | |||||| |||||||| ||||| |||| |    
T  20601785 tca-aggtcttcttctacctcttttgacctgactctcctccatcttatatactcttcttacaacggcatctacaggtc-ttctctctacatgcacaaacc 20601882  T
Q  738 atataaggttattttctaccaacttttctactata 772  Q
    || |||   ||||||||||||||||||||||||||    
T  20601883 atctaatcctattttctaccaacttttctactata 20601917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 525 - 698
Target Start/End: Original strand, 39100563 - 39100734
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||||| |||| | |||| |||||||| |||||  |||||||||||||||||||||||||  | |  | |||||||||| ||    
T  39100563 aagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcattgacctccaaa--tcctttctaatggtt 39100660  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||| ||||||||||||||||||||||||| |||||| ||| |||| || |||||||||||||||||||||||    
T  39100661 tctctaatagttttcctaggtcttcctctacctcttttaacctgactatcttccatctgatctactcttcttac 39100734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 535 - 773
Target Start/End: Original strand, 46582862 - 46583096
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatag 634  Q
    |||||||||||| |||| | | ||||| ||||||||||| | || |||||||||||||||||||||||||| |  | ||||| |||| ||||||| ||||    
T  46582862 ggctacatggatcaaatgacgccatagggttctatcatacaccaaatttggatccaactcattgacctttaaa--tcctttccaatggtttctctaatag 46582959  T
Q  635 ttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgc-aggtctttctctcttcatgccca 733  Q
    ||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| || |||| | |  |||||   ||||| ||||||||    
T  46582960 ttttcataggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctacggggtct---tctctacatgccca 46583056  T
Q  734 aatcatataaggttattttctaccaacttttctactatag 773  Q
    |  ||| ||||  |||||||||||||||||||||||||||    
T  46583057 acccatctaagcctattttctaccaacttttctactatag 46583096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 1777044 - 1777289
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | |||| |||||||||||| | || ||||||||||||||||||||||| || |  ||  |||||||| ||    
T  1777044 aagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcattgacctctaaatctt--ttctaatggtt 1777141  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| |    ||| ||||||||    
T  1777142 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctatgagtc-ttctctct 1777240  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
      ||| ||||| ||| ||||  |||||||||||||||||| ||||||||    
T  1777241 agatgtccaaaccatctaagcctattttctaccaacttttttactatag 1777289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 532 - 701
Target Start/End: Original strand, 47265229 - 47265396
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| ||||||    |||||||||||||||| |||| ||||||||||||||||||||||| || |  |||||||||||| ||||||| |    
T  47265229 gtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcattgacctctaaa--ttctttctaatggtttctctaa 47265326  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    |||||||||||||||||||||||| |||||| ||  || |||||||||| |  |||||||||||||||||    
T  47265327 tagttttcctaggtcttcctctacctcttttaactagaatctcctccatttagtctactcttcttacgac 47265396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 537 - 773
Target Start/End: Complemental strand, 43434167 - 43433934
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagtt 636  Q
    |||||||||| |||| | | | |||||||||||| || |||| |||||||||| |||||||||||| || |  |  |||  |||| ||||||| ||||||    
T  43434167 ctacatggatcaaatgacgccgtagtgttctatcctacatcaaatttggatccgactcattgacctctaaa--tcattttcaatggtttctctaatagtt 43434070  T
Q  637 ttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaat 736  Q
    ||||||||||||||||||| |||||| ||  ||||||||||||| |||| |||||||||||| ||  ||| | | |||| |||||||| ||||||||||     
T  43434069 ttcctaggtcttcctctacctcttttaacttgactctcctccatttgatttactcttcttaccacggcatctacgggtc-ttctctctacatgcccaaac 43433971  T
Q  737 catataaggttattttctaccaacttttctactatag 773  Q
    ||| ||||  |||||||||||||||||||||||||||    
T  43433970 catctaagcctattttctaccaacttttctactatag 43433934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 557 - 773
Target Start/End: Complemental strand, 50287185 - 50286972
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||| || |  | |||| |||||||| |||| ||||||||| ||||||||| |||||     
T  50287185 catagtgttctatcatacatcaaatttagatccaactcattgacctctaaa--tcctttataatgattactctaatagttttcataggtcttcttctacc 50287088  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    |||||| ||  |||||||||||||  |||||||||||||||| ||  ||| | | |||| |||||||| |||||||||| |||  |||  ||||||||||    
T  50287087 tcttttaacttgactctcctccattcgatctactcttcttaccacggcatctacgggtc-ttctctctacatgcccaaaccatccaagtctattttctac 50286989  T
Q  757 caacttttctactatag 773  Q
    |||||||||||||||||    
T  50286988 caacttttctactatag 50286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 37773485 - 37773723
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||||||| || ||| |||||| ||||||||||||||||||||| || || ||||||||||||||||||||  | |  | |||||||||| ||||||| |    
T  37773485 gtcggctatatagatcaaattatgtcatagtgttctatcataaaccaaatctggatccaactcattgacctccaaa--tcctttctaatggtttctctaa 37773582  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||||| ||| ||||| |||||| |   ||||||| ||||| ||||||||||| ||||| || | |||| | ||||  ||| ||| ||||||    
T  37773583 tagttttcctaggtattcatctacctcttttaaattgactctcatccatttgatctactctacttacaacgatatttacgggtc-gtctatctacatgcc 37773681  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  ||||||||||| |||||||||||||||    
T  37773682 caaaccatctaagcctattttctaccgacttttctactatag 37773723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 27450207 - 27450451
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| |||||||||||||||||||||||||||||  | ||| |  |||| |||| ||    
T  27450207 aagtggggtcggctacatggatcaaatgacgccatagtgttctatca-aaatcatatttggatccaactcattgacc--tctaaatcttttccaatggtt 27450303  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  ||  ||||| ||||||||||| ||| |||||| ||| || ||| |||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  27450304 tctcgaatgattttcttaggtcttcctttacctcttttaacctgattctactccatttgatctactcttcttacaacggcatctacgggtc-ttctctct 27450402  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| | ||| ||| ||||  |||||||||||||||||||||||||||    
T  27450403 acatgtcaaaaccatctaagcctattttctaccaacttttctactatag 27450451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 28236437 - 28236193
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| ||||||   |||| | |||||||||||| || ||||||||||||||||||||||| || |  |  ||| ||| ||||    
T  28236437 aagtggggtcggctacatagatcaaattacaccataatattctatcataaaccaaatttggatccaactcattgacctctaaa--tcatttataaagatt 28236340  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||||||||||||||||||||||   |||| ||  || ||||| |||| ||||| |||||||||||||| |||| | || ||||| ||||||    
T  28236339 tctctaatagttttcctaggtcttcctctacca-ttttaacttgattctccgccatttgatcaactcttcttacgacgacatctacaagtctt-ctctct 28236242  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  ||||||| |||||||||||||||||||    
T  28236241 acatgcccaaaccatctaagcctattttccaccaacttttctactatag 28236193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 525 - 764
Target Start/End: Complemental strand, 32479293 - 32479057
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| ||||||| |||||||||||||||||  | ||| |  ||||||||| ||    
T  32479293 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcattgacc--tctaaatcttttctaatggtt 32479196  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| ||||||||||||||| |||||  ||| | ||||||||||| ||||||||||||||||| ||  | | | |||||| | ||||||    
T  32479195 tctcgaatggttttcttaggtcttcctctacctctttcaacctgtctctcctccatttgatctactcttcttacaacggcctctacaggtc-tcctctct 32479097  T
Q  725 tcatgcccaaatcatataaggttattttctaccaactttt 764  Q
     |||| ||||| ||| ||||  ||||||||||||||||||    
T  32479096 acatgtccaaaccatctaagcctattttctaccaactttt 32479057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 525 - 759
Target Start/End: Complemental strand, 8286694 - 8286455
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| | ||||||||||||| |||| | ||||||||||||||||||||| || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  8286694 aagtgggggcggctacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 8286597  T
Q  625 tctcttatagttttcctaggtcttcctcta--------cttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtct 716  Q
    ||||| ||||||||||||||||||||||||        | |||| | ||  ||||||||||||| | ||||||||||||||||||  ||| | | ||||     
T  8286596 tctctaatagttttcctaggtcttcctctacctcttgtcctcttctaacttgactctcctccatttcatctactcttcttacgacggcatctacgggtc- 8286498  T
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaa 759  Q
    |||||||| |||||| ||| ||| ||||  |||||||||||||    
T  8286497 ttctctctacatgcctaaaccatctaagcctattttctaccaa 8286455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 555 - 772
Target Start/End: Complemental strand, 20192258 - 20192044
Alignment:
Q  555 gtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctcta 654  Q
    |||||| |||||||||||| |||| ||||||||||||| || |||||| || |  | |||||||||| ||||||| ||||||||   ||||||||| |||    
T  20192258 gtcataatgttctatcatacatcaaatttggatccaacccactgacctctaaa--tcctttctaatggtttctctaatagttttttcaggtcttccacta 20192161  T
Q  655 cttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttct 754  Q
    | |||||| ||  ||||||||||||| |||| |||||||||||| ||| ||| | | |||| |||||||| ||||||||||  || |||| |||||||||    
T  20192160 cctcttttaacttgactctcctccatttgatatactcttcttaccacagcatctacgggtc-ttctctctacatgcccaaactatctaagcttattttct 20192062  T
Q  755 accaacttttctactata 772  Q
    | ||||||||||||||||    
T  20192061 atcaacttttctactata 20192044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 23906324 - 23906567
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  23906324 aagtggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 23906421  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||||| |||||||||| | ||| | |||| ||  ||||||||||||| | ||||||||||||||| ||  ||| |  | ||| ||||||||    
T  23906422 tctctaatagtttttctaggtcttcatttaccttttttaacttgactctcctccatttaatctactcttcttaccacggcatct--acgtc-ttctctct 23906518  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||| |||| ||| ||||  |||||||||| ||||||||||||||||    
T  23906519 acatgctcaaaccatctaagcctattttctacaaacttttctactatag 23906567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 525 - 689
Target Start/End: Complemental strand, 21237113 - 21236951
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || ||||||||| || |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  21237113 aagtggggttggctacatgtatcaaatgacgccatagtgttctatcatataccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 21237016  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctac 689  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||    
T  21237015 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctac 21236951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 533 - 654
Target Start/End: Complemental strand, 6957845 - 6957726
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttat 632  Q
    |||||||||||||| |||| | ||||||||||||||||||| |||| ||||||||||||||||||||||  | ||| | |||||||||| ||||||| ||    
T  6957845 tcggctacatggatcaaatgacgtcatagtgttctatcatacatcaaatttggatccaactcattgacc--tctaaatcctttctaatggtttctctaat 6957748  T
Q  633 agttttcctaggtcttcctcta 654  Q
    ||||||||||||||||||||||    
T  6957747 agttttcctaggtcttcctcta 6957726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 525 - 654
Target Start/End: Complemental strand, 12494918 - 12494791
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  12494918 aagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 12494821  T
Q  625 tctcttatagttttcctaggtcttcctcta 654  Q
    ||||| ||||||||||||||||||||||||    
T  12494820 tctctaatagttttcctaggtcttcctcta 12494791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 50679729 - 50679586
Alignment:
Q  555 gtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctcta 654  Q
    |||||||| || ||||||||| || ||||||||||||||||||||||| || |  | |||||||||| ||||||| ||||||||||||||||||||||||    
T  50679729 gtcatagtattttatcataaaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtttctctaatagttttcctaggtcttcctcta 50679632  T
Q  655 cttcttttgacccgactctcctccatctgatctactcttcttacga 700  Q
    | |||| | ||  ||||||||||||| | |||||||||||||||||    
T  50679631 cctcttctaacttgactctcctccatttaatctactcttcttacga 50679586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 548 - 772
Target Start/End: Original strand, 20591356 - 20591571
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtct 647  Q
    |||||| ||||| ||||||||||||||  |||||||| ||||||||||||||||| || |  | ||||||||||   ||||||||||||||| |||||||    
T  20591356 aaattacgtcattgtgttctatcataac-catatttgaatccaactcattgacctctaaa--tcctttctaatggggtctcttatagttttcttaggtct 20591452  T
Q  648 tcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggtt 747  Q
    |||||||| |||    ||  |||||||||||||||||| |||||||||||| || |||| |    ||| |||||||| |||||||||| ||| |||  ||    
T  20591453 tcctctacctct----acttgactctcctccatctgatatactcttcttac-acgacatctatgagtc-ttctctctacatgcccaaaccatctaatctt 20591546  T
Q  748 attttctaccaacttttctactata 772  Q
    |||||||||||||||||||||||||    
T  20591547 attttctaccaacttttctactata 20591571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 563 - 690
Target Start/End: Original strand, 20821073 - 20821197
Alignment:
Q  563 gttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttctttt 662  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  | |||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  20821073 gttctatcataaatcatatttgaatccaactcattgacctttaaa--tcctttctaatg-tttctcttatagttttcctaggtcttcatctacctctttt 20821169  T
Q  663 gacccgactctcctccatctgatctact 690  Q
    || | || ||| |||||||| |||||||    
T  20821170 gatctgattctgctccatctaatctact 20821197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 541 - 697
Target Start/End: Complemental strand, 16003165 - 16003011
Alignment:
Q  541 atggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcc 640  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||  | ||| || ||||||||| ||||||||||||||||      
T  16003165 atggattaaattacgtcatagtgttttatcataaatcatatttagatccaactcattgacc--tctaaattttttctaatggtttctcttatagtttttt 16003068  T
Q  641 taggtcttcctctacttcttttgacccgactctcctccatctgatctactcttctta 697  Q
      ||| |||||||| ||||||||||   ||| || |||||||||| ||| |||||||    
T  16003067 acggtattcctctatttcttttgacataactttcatccatctgatttacccttctta 16003011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 583 - 744
Target Start/End: Original strand, 1211476 - 1211633
Alignment:
Q  583 tggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatct 682  Q
    |||||||||||||||||||| ||    || |||||||| |||| |||||||||| ||||| |||||||||||  |||||||| |||||||| ||||||||    
T  1211476 tggatccaactcattgacctctaa---ttttttctaataatttatcttatagttctcctatgtcttcctctatctcttttgatccgactctactccatct 1211572  T
Q  683 gatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataag 744  Q
    ||||||||||||||||||||| || |  ||||| |||||||| ||| |||||| ||| ||||    
T  1211573 gatctactcttcttacgacaatatctataggtc-ttctctctacattcccaaaccatttaag 1211633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 525 - 654
Target Start/End: Complemental strand, 7947192 - 7947065
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||||  | ||||||||||||||||||||| |||||||||||||| |||||||  | ||| | ||||| |||| ||    
T  7947192 aagtggggtcggctacatggatcaaattacatgatagtgttctatcataaatcaaatttggatccaactgattgacc--tctaaatcctttcaaatggtt 7947095  T
Q  625 tctcttatagttttcctaggtcttcctcta 654  Q
    ||||| ||||||||| ||||||||||||||    
T  7947094 tctctaatagttttcttaggtcttcctcta 7947065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 562 - 773
Target Start/End: Original strand, 41009414 - 41009622
Alignment:
Q  562 tgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttcttt 661  Q
    |||| ||||||||| |||||||| ||||| |||||||||  || ||| |  ||||||||  |||||||||||||||||| ||||||||||||||  ||||    
T  41009414 tgttatatcataaaccatatttgaatccatctcattgac--ttctaaatcatttctaatagtttctcttatagttttcc-aggtcttcctctaccacttt 41009510  T
Q  662 tgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggtta-ttttctaccaac 760  Q
    ||||| ||||||||||||||||||||| | ||||||||||  |||   || ||| |||| ||| ||||| |||| ||| ||||  || |||| |||||||    
T  41009511 tgacctgactctcctccatctgatctatttttcttacgactgcatcaacatgtc-ttctttctacatgcacaaaccatctaagtctatttttttaccaac 41009609  T
Q  761 ttttctactatag 773  Q
    |||||||||||||    
T  41009610 ttttctactatag 41009622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 525 - 696
Target Start/End: Complemental strand, 35690526 - 35690357
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||| | |  ||||||| |||||||| |||| || |  || ||  ||||  ||    
T  35690526 aagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactcattaacctctaaa--tttttcgtaatagtt 35690429  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttctt 696  Q
    |||||||||||||| |||||||||||||||| |||||||| | |||| |||||||||| ||| |||||||||    
T  35690428 tctcttatagtttttctaggtcttcctctacctcttttgatctgactttcctccatctaatccactcttctt 35690357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 535 - 694
Target Start/End: Complemental strand, 51421975 - 51421818
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttt-ctaatgatttctcttata 633  Q
    |||||||||||| |||||| |||||| |||||||||||||| ||| ||||||||||| ||||| |||| || |   ||||| |||||  |||||||||||    
T  51421975 ggctacatggatcaaattacgtcataatgttctatcataaaccatttttggatccaattcattaacctctaaa---tctttcctaatagtttctcttata 51421879  T
Q  634 gttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttc 694  Q
    ||||| |||  ||||||||||| |||||||| | |||   ||||||| |||||||||||||    
T  51421878 gtttttctaaatcttcctctacctcttttgatctgacaaacctccatttgatctactcttc 51421818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 535 - 653
Target Start/End: Complemental strand, 4548267 - 4548151
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatag 634  Q
    |||||||||||| |||||| | | ||||||||||||||||| || |||| ||||||||| |||||||| || ||  | ||||||||||||||||| ||||    
T  4548267 ggctacatggatcaaattacgccttagtgttctatcataaaccaaatttagatccaacttattgacctctaaaa--tatttctaatgatttctctaatag 4548170  T
Q  635 ttttcctaggtcttcctct 653  Q
    ||||| |||||| ||||||    
T  4548169 ttttcgtaggtcctcctct 4548151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 562 - 694
Target Start/End: Original strand, 45204903 - 45205032
Alignment:
Q  562 tgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatagttttcctaggtcttcctctacttctt 660  Q
    |||||||||||||| ||||||||||||||||| ||| | || || |   |||||| ||||  |||||||||||||||| ||||||||||||| || ||||    
T  45204903 tgttctatcataaaccatatttggatccaacttattaaactctaaa---tctttcctaatagtttctcttatagtttttctaggtcttcctccacctctt 45204999  T
Q  661 ttgacccgactctcctccatctgatctactcttc 694  Q
    |||| | | |||||||||||||||||||||||||    
T  45205000 ttgatctg-ctctcctccatctgatctactcttc 45205032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 532 - 662
Target Start/End: Original strand, 51811312 - 51811440
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||| |||||||||||| |||||||||| ||  | || || ||||||||||||||||  |    
T  51811312 gtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccatatttggatcaaactcattgagctcga-aactt-tttctaatgatttctcgga 51811409  T
Q  632 tagttttcctaggtcttcctctacttctttt 662  Q
    |  ||||| ||||||||| ||||||||||||    
T  51811410 tgattttcttaggtcttcatctacttctttt 51811440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 698
Target Start/End: Complemental strand, 27983440 - 27983277
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttat 632  Q
    |||||||||||||| |||| | ||||||||||||||| | ||  ||||||| ||||||| ||||||| || || |  ||  |||||| | ||| ||  ||    
T  27983440 tcggctacatggatcaaatgacgtcatagtgttctataaaaatccatattttgatccaattcattgaactctaaatctt--ttctaaaggtttatcgaat 27983343  T
Q  633 agttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
     |||||| || |||||||||||| |||||| ||| ||||||||||||| |||| ||||||||||||    
T  27983342 ggttttcttatgtcttcctctacctcttttaacctgactctcctccatttgatatactcttcttac 27983277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 19969436 - 19969359
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||| ||||||||||||| || |||||||||||||||||||||||    
T  19969436 aagtggggtcggctacatggatcaaatgacgccatagcgttctatcataaaccaaatttggatccaactcattgacct 19969359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 525 - 654
Target Start/End: Complemental strand, 21528543 - 21528416
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||     ||||||||||||||| ||| |||||||| ||||||||||||||||  | ||| |  ||||||||| ||    
T  21528543 aagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcattgacc--tctaaatcttttctaatggtt 21528446  T
Q  625 tctcttatagttttcctaggtcttcctcta 654  Q
    ||||  || |||||| ||||||||||||||    
T  21528445 tctcgaatggttttcttaggtcttcctcta 21528416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 19154890 - 19154967
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||| ||| ||||||| |||| | | ||||||||||||||||||| || |||||||||||||||||||||||    
T  19154890 aagtggggtcagctgcatggatcaaataacgccatagtgttctatcataaaccaaatttggatccaactcattgacct 19154967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 526 - 586
Target Start/End: Original strand, 883388 - 883448
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttgga 586  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||| |||| |||||||||    
T  883388 agtggggtcggctacatggattaaatgatgtcatagtgttctatcaaaaattatatttgga 883448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 698
Target Start/End: Complemental strand, 28351814 - 28351643
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| ||||||||||||||| |||| |   ||||  ||||||  |||||  |||||||||||||||||| | | || || |   |||||| ||||  |    
T  28351814 aagtggggtcggctacatggatcaaataattccataaggttctactataaactatatttggatccaactcaataatctctaaa---tctttcgtaatagt 28351718  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||||||||||||| ||||||||| |||||| |||| | | | |||| |||||||||||||||||||| |||||    
T  28351717 ttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctccatctgatctactctccttac 28351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 540 - 735
Target Start/End: Original strand, 53518365 - 53518554
Alignment:
Q  540 catggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttt-ctaatgatttctcttatagtttt 638  Q
    ||||||| |||||| | ||||||||||||||||||| ||||||| ||||||||||||| |||| || |   ||||| ||| |  ||| ||| ||||||||    
T  53518365 catggatcaaattacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaa---tctttcctattagtttttctcatagtttt 53518461  T
Q  639 cctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaa 735  Q
     ||||| |||||||||| |||| |||   ||||   |||||||||||||||||||| ||| ||| |||   |||||| |||||||| ||| ||||||    
T  53518462 tctaggccttcctctacctcttctgatttgact---ctccatctgatctactcttcgtactacagcatccacaggtc-ttctctctacatacccaaa 53518554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 55008001 - 55007929
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| |||||| |||||| || ||||||||||| ||||||| | |||||||||||    
T  55008001 aagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcatt 55007929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 661
Target Start/End: Complemental strand, 50862844 - 50862764
Alignment:
Q  580 atttggatccaactcattgacctttataagttctttctaatgatttctctta-tagttttcctaggtcttcctctacttcttt 661  Q
    ||||||||||||||||||||||| || |  | |||||||||| ||||| ||| |||||||||||||||||||||||| |||||    
T  50862844 atttggatccaactcattgacctctaaa--tcctttctaatggtttcttttaatagttttcctaggtcttcctctacctcttt 50862764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Original strand, 22873636 - 22873698
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||||||| || ||| |||||||||||||  |||||||||| ||||||||||    
T  22873636 ggctacatggattaaattacgttataatgttctatcataacccatatttggaaccaactcatt 22873698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 773
Target Start/End: Original strand, 35555770 - 35555919
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||||||||||| |||||||| || |||| |||  |||||| ||||||||| |||| ||||||||| || || |||  ||   |||||| ||||||    
T  35555770 tttctcttatagtttttctaggtctacccctacctctagtgacccaactctcctctatctaatctactctcctaactacagaatccacaggtc-ttctct 35555868  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||  ||||||||| ||  ||||  || ||||||||| ||||||||||||||    
T  35555869 ctaaatgcccaaaccacctaagtctagtttctaccatcttttctactatag 35555919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 599
Target Start/End: Original strand, 41729509 - 41729551
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattga 599  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  41729509 catagtgttctatcataaaccatatttggatccaactcattga 41729551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 668 - 773
Target Start/End: Complemental strand, 10209148 - 10209044
Alignment:
Q  668 gactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttcta 767  Q
    ||||||||||||||||||||||||| ||||| | || |||  |||||| ||||| || |||||||||| ||  |||| ||| ||||| ||| ||||||||    
T  10209148 gactctcctccatctgatctactctccttactaaaaaattcacaggtc-ttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttcta 10209050  T
Q  768 ctatag 773  Q
    ||||||    
T  10209049 ctatag 10209044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 631 - 695
Target Start/End: Complemental strand, 31459157 - 31459093
Alignment:
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttct 695  Q
    |||||||| |||||||||||| ||| |||||||| | ||||||||| ||| ||||||||||||||    
T  31459157 atagtttttctaggtcttcctttacctcttttgatctgactctcctacatatgatctactcttct 31459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 538 - 597
Target Start/End: Original strand, 34208309 - 34208368
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||| |||||  | |||| |||||||||||||| |||||||||||||||||||||    
T  34208309 tacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcatt 34208368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 629 - 708
Target Start/End: Complemental strand, 55579185 - 55579106
Alignment:
Q  629 ttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacattt 708  Q
    |||||||||| |||||||||| ||||| ||||||||   ||||||||||||||  || |||||||| ||| |||||||||    
T  55579185 ttatagtttttctaggtcttcttctacctcttttgatttgactctcctccatcaaatttactcttcatactacaacattt 55579106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 773
Target Start/End: Complemental strand, 26356778 - 26356629
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||||||||||| ||||||||||| |||| |||  |||   ||||| |||||||| |||||||||| ||||| |||| |    || ||| ||||||    
T  26356778 tttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatccgatctactctccttactacaatacccacatgtc-ttctct 26356680  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||   |||||||| ||  ||||  |||||||||||| ||||||||||||||    
T  26356679 ctaagtgcccaaaccacctaagtctattttctaccatcttttctactatag 26356629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 773
Target Start/End: Original strand, 7092290 - 7092492
Alignment:
Q  567 tatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatagttttcctaggtcttcctctacttcttttgac 665  Q
    ||||||||||||||||| |||| ||| |||| |||| || |   |||||| |||| ||||| |||||| |||  ||||||||||||| || |||| ||      
T  7092290 tatcataaatcatatttagatctaacgcattaacctctaaa---tctttcataataatttcacttata-tttctctaggtcttcctccacctcttatgtt 7092385  T
Q  666 ccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttc 765  Q
    | ||||||| ||||||||||||||||||| ||| | ||||| | || ||| ||||||||  ||||||||| ||  |||   ||||||||| ||  |||||    
T  7092386 ctgactctcatccatctgatctactcttcatactataacatctacatgtc-ttctctctatatgcccaaaccacttaaacctattttctatcatattttc 7092484  T
Q  766 tactatag 773  Q
    ||||||||    
T  7092485 tactatag 7092492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 597
Target Start/End: Complemental strand, 28486165 - 28486104
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||| |||||| | |||| ||||| ||  ||||||||||||||||||||||||||    
T  28486165 gctacatggatcaaattacgccatattgttcaattgtaaatcatatttggatccaactcatt 28486104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 16875779 - 16875851
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||| ||||||||||| || |||  | ||| |||||||||||||||||||||||| |||||| ||||    
T  16875779 aagtggggtctgctacatggatcaagttacataataatgttctatcataaatcatatttgggtccaacacatt 16875851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 31043327 - 31043255
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||| ||| || |||| |||||| |  |||||||||||||| ||| |||||||||||||||||||||    
T  31043327 aagtggggtcagctgcaaggatcaaattatgcaatagtgttctatcacaaaccatatttggatccaactcatt 31043255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 593
Target Start/End: Original strand, 56439598 - 56439666
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| || ||||| ||||||||||||| |  ||| |||||||||||||| ||||||| |||||||||    
T  56439598 aagtggggttggctatatggattaaattacgctataatgttctatcataaaccatatttcgatccaact 56439666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 650
Target Start/End: Complemental strand, 21107236 - 21107124
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagt 635  Q
    ||||||| ||| ||| |||| ||||  ||||||||||||| ||||||||||||||||| ||| | |  || || |  || |||||  |||||||||||||    
T  21107236 gctacatagatcaaactaagccataaagttctatcataaaccatatttggatccaactaattaatcactaaaact--ttcctaatagtttctcttatagt 21107139  T
Q  636 tttcctaggtcttcc 650  Q
    ||| |||||||||||    
T  21107138 ttttctaggtcttcc 21107124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 597
Target Start/End: Original strand, 34233052 - 34233123
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||||||||| |||||| |  | | |||||||||||||| | ||||| |||| ||||||||    
T  34233052 agtggcgtcggctacatggatcaaattacgctacaatgttctatcataaaccttattttgatctaactcatt 34233123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 597
Target Start/End: Complemental strand, 5306553 - 5306479
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||| ||  |||| |||||| |||||| | |||| |||| | ||||||| |||||||||||||||||||||    
T  5306553 ccaagtggggttagctatatggatcaaattacgccataatgttatgtcataaaccatatttggatccaactcatt 5306479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 583
Target Start/End: Complemental strand, 12443342 - 12443292
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatattt 583  Q
    |||||||||||||| |||||| | |||| |||||||||||||| |||||||    
T  12443342 tcggctacatggatcaaattatgccataatgttctatcataaaccatattt 12443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 598
Target Start/End: Complemental strand, 46749779 - 46749729
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattg 598  Q
    |||||| |||||| | || |||||||||||||||||| |||||||||||||    
T  46749779 aaattacgtcataatattttatcataaatcatatttgaatccaactcattg 46749729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 54935406 - 54935348
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatat 581  Q
    |||||||| || |||||||||||| |||||| || ||| |||||||||||||| |||||    
T  54935406 ccaagtggggtaggctacatggatcaaattatgttataatgttctatcataaaccatat 54935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 597
Target Start/End: Complemental strand, 25575068 - 25575007
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||| ||||||   || | |||||||||||||| ||||||| |||||||||||||    
T  25575068 gctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcatt 25575007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 26024884 - 26024949
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||| ||||||   |||| |||||||||||||| ||| | | |||||||||||||    
T  26024884 gtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcatt 26024949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 642
Target Start/End: Original strand, 41009283 - 41009361
Alignment:
Q  562 tgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttccta 642  Q
    |||| ||||||||| |||||||| |||||||||||||||  || ||| |  ||||||||  ||||||||||||||| ||||    
T  41009283 tgttatatcataaaacatatttgaatccaactcattgac--ttctaaatcatttctaattgtttctcttatagtttaccta 41009361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 532 - 701
Target Start/End: Complemental strand, 39318377 - 39318210
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||| || |  | |||||||||| |||||||||    
T  39318377 gtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaa--tcctttctaatggtttctctta 39318280  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  39318279 tagttttcctaggtcttcctctacctcttttgacccgactctcctccatctgatctgctcttcttacgac 39318210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 34792376 - 34792621
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| || |||||||||||||||||||||||||| |  | |||||||||| ||    
T  34792376 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctttaaa--tcctttctaatggtt 34792473  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  34792474 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 34792572  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  || ||||||||||||||||||||||||    
T  34792573 acatgcccaaaccatctaagcctactttctaccaacttttctactatag 34792621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 1211000 - 1210755
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  1211000 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 1210903  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  1210902 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 1210804  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  1210803 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 1210755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 49347420 - 49347665
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  49347420 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 49347517  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  49347518 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 49347616  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  49347617 gcatgaccaaaccatctaagcctattttctaccaacttttctactatag 49347665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 38807698 - 38807943
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||  |||||| | ||||||||||||||||||| |||||||||||||||||| ||||||| || |  | |||||||||| ||    
T  38807698 aagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaactcgttgacctctaaa--tcctttctaatggtt 38807795  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||||||||| |||||||||| |||  |||||||| | |||||||||||||||| |||||||||||||||||  ||| |   |||| |||||| |    
T  38807796 tctcttatagttttcttaggtcttcccctagctcttttgatctgactctcctccatctggtctactcttcttacgacggcatctaagggtc-ttctcttt 38807894  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||| ||| ||| ||||  |||||||||||||||||||||||||||    
T  38807895 acatgcctaaaccatctaagtctattttctaccaacttttctactatag 38807943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 526 - 773
Target Start/End: Complemental strand, 22090350 - 22090106
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgattt 625  Q
    ||||| ||||||||||||||| |||| | ||||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| |||    
T  22090350 agtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggttt 22090253  T
Q  626 ctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctctt 725  Q
    |||| |||||||||||||||||||||||||  ||||| ||  ||||||||||||| ||||||||| ||||||| ||  ||| | | |||| ||||| ||     
T  22090252 ctctaatagttttcctaggtcttcctctaccccttttaacttgactctcctccatttgatctacttttcttaccacggcatctacgggtc-ttctcccta 22090154  T
Q  726 catgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  22090153 catgcccaaaccatctaagcctattttctaccaacttttctactatag 22090106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 30202157 - 30202402
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  30202157 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 30202254  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||| ||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  30202255 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcgtccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 30202353  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||| ||||||||||||    
T  30202354 acatgaccaaaccatctaagcctattttctaccaacctttctactatag 30202402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 8672173 - 8671928
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || ||||| |||||| |||| | |  |||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  8672173 aagtggggttggctatatggatcaaatgacgctatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 8672076  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | | || ||||||||    
T  8672075 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacggatc-ttctctct 8671977  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  8671976 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 8671928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 51440792 - 51441037
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||| |||||| || |||| | | | ||||||||||||||| | || |||||||||||||||||||||||  |||| | |||||||||| ||    
T  51440792 aagtggggtcggttacatgaatcaaatgacgccgtagtgttctatcatacaccaaatttggatccaactcattgacct--ataaatcctttctaatggtt 51440889  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| || ||| ||  ||||||||||||| || |||||||||||||| ||  ||| | | |||| ||||||||    
T  51440890 tctctaatagttttcctaggtcttcctctacctcctttaacttgactctcctccatttgctctactcttcttaccacggcatctccgggtc-ttctctct 51440988  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  51440989 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 51441037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 51602311 - 51602066
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | | |||  |||||||||||| | || ||||||||||||||||||||||| || |  | | |||||||| ||    
T  51602311 aagtggggttggctacatggatcaaatgacgccatgatgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcccttctaatggtt 51602214  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    | ||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| || |||| | | |||| ||||||||    
T  51602213 tttctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctacgggtc-ttctctct 51602115  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  51602114 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 51602066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 525 - 765
Target Start/End: Original strand, 25979258 - 25979495
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| |||||||||||||||||||||||||  | ||| | |||||||||| ||    
T  25979258 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaatggtt 25979355  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| | ||||||||||||| |||||| ||| |||||||||||||  |||||||||| ||||| ||| ||| | | |||| ||||||||    
T  25979356 tctctaatagttttcatgggtcttcctctacctcttttaacctgactctcctccattcgatctactctccttacaacagcatctacgggtc-ttctctct 25979454  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttc 765  Q
     |||| ||||| ||| ||||  || ||||||| ||||||||    
T  25979455 acatgtccaaaccatctaagcctagtttctactaacttttc 25979495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 557 - 773
Target Start/End: Original strand, 32231013 - 32231226
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    ||||||||||||||||| | ||  |||||||||||||||||||||| || |  | |||||||||| ||||||| |||||||||||||||||||||||||     
T  32231013 catagtgttctatcatagaccaactttggatccaactcattgacctctaaa--tcctttctaatggtttctctaatagttttcctaggtcttcctctacc 32231110  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    |||||| ||  ||||||||||||| |||||||||||||||| |||  ||| | || ||| |||||||| |||||||||| ||| ||||  ||||||||||    
T  32231111 tcttttaacttgactctcctccatttgatctactcttcttatgacggcatctacaagtc-ttctctctacatgcccaaaccatctaagcctattttctac 32231209  T
Q  757 caacttttctactatag 773  Q
    ||| |||||||||||||    
T  32231210 caatttttctactatag 32231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 4001482 - 4001727
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | ||||||| ||||||||| ||| |||||||||||||||||||||||||  | ||| |  ||| ||||| ||    
T  4001482 aagtggggttggctacatggatcaaatgatgtcatagggttctatcaaaaaccatatttggatccaactcattgacc--tctaaatcttttttaatggtt 4001579  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| | ||||||    
T  4001580 tctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtc-tcctctct 4001678  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  4001679 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 4001727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 525 - 769
Target Start/End: Complemental strand, 4029377 - 4029136
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||   | ||||||||| ||||||| | || |||||||||||||||||||||||||| |  | |||||||||| ||    
T  4029377 aagtggggtcggctacatggatcaaatgtcgccatagtgttatatcatacaccaaatttggatccaactcattgacctttaaa--tcctttctaatggtt 4029280  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||| ||||||||| ||  ||| | | |||| ||||||||    
T  4029279 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctattcttcttaccacggcatctacgggtc-ttctctct 4029181  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctact 769  Q
     |||| ||||| | | ||||  |||||||||||||||| ||||||    
T  4029180 acatgtccaaaccttctaagcctattttctaccaacttgtctact 4029136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 43240413 - 43240651
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||||||||||| || |||| | | ||||||||||||||||| | || ||||||||||||||||||||| |  |||| |  ||||||||| ||||||| |    
T  43240413 gtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacat--ataaatcatttctaatggtttctctaa 43240510  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||||||||||||||| | |||| ||   |||||||||||| ||||||||||||||||| ||||||| | | |||| |||||||| |||||     
T  43240511 tagttttcctaggtcttcctctaccttttttaacttaactctcctccatttgatctactcttcttaccacaacatctacgggtc-ttctctctacatgct 43240609  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||||  || ||||  ||||||||| ||| |||||||||||||    
T  43240610 caaactatctaagcctattttctatcaatttttctactatag 43240651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 696525 - 696279
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtca-tagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgat 623  Q
    |||||| ||||||||||| ||| |||| | | || ||||||||||||| ||| |||||||||||| ||||||||||||| || |  ||  |||||||| |    
T  696525 aagtggggtcggctacattgatcaaatgacgccaatagtgttctatcaaaaaccatatttggatcaaactcattgacctctaaatctt--ttctaatggt 696428  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    |||||  || |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| |||||||    
T  696427 ttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatatgatctactcttcttacaacggcatctacgggtc-ttctctc 696329  T
Q  724 ttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    | |||| ||||  ||| ||||  |||||||||||||||||||||||||||    
T  696328 tacatgtccaagccatctaagcctattttctaccaacttttctactatag 696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 525 - 698
Target Start/End: Original strand, 37311782 - 37311953
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||  | ||| |  ||||||||| ||    
T  37311782 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacc--tctaaatcttttctaatggtt 37311879  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||  || |||||||||||||| ||||||| |||||| ||| ||||||||||||| |||||||||||||||||    
T  37311880 tctcaaatggttttcctaggtctacctctacctcttttaacctgactctcctccatttgatctactcttcttac 37311953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 9592989 - 9592744
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | |  |||||||||||||||| | || ||||  ||| ||||||||||||| || |  |  ||||||||| ||    
T  9592989 aagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttaaatctaactcattgacctctaaa--tcatttctaatggtt 9592892  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||| |||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  9592891 tctctaataggtttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 9592793  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||  ||| ||||  |||||||||| ||||||||||||||||    
T  9592792 acatgcccaacccatctaagcctattttctacaaacttttctactatag 9592744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 15086177 - 15085944
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||||||||| || |  | || |||||||       
T  15086177 aagtggggttggctacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcattgacctctaaa--tcctatctaatg--- 15086083  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
             |||||| ||||||||||||||| |||||| | | ||||||||||||| |||||||||||||| || ||  ||| | | |||| ||||||||    
T  15086082 ---------gttttcttaggtcttcctctacctcttttaatctgactctcctccatttgatctactcttctaacaacggcatctacgggtc-ttctctct 15085993  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  15085992 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 15085944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 525 - 662
Target Start/End: Complemental strand, 52921335 - 52921200
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | |  |||||||||||||||||| ||||||||||||||| |||||||||  | ||| | |||||||||| ||    
T  52921335 aagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcattgacc--tctaaatcctttctaatggtt 52921238  T
Q  625 tctcttatagttttcctaggtcttcctctacttctttt 662  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  52921237 tctctaatagttttcctaggtcttcctctacctctttt 52921200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 8392027 - 8391782
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | | |||||| |||||||| ||||||||||||||||||||| |||||||  | ||| |  ||||||||||||    
T  8392027 aagtggggttggctacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaacttattgacc--tctaaatcttttctaatgatt 8391930  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| ||||||||| | ||| || ||| ||  ||||||||| ||| ||||||||||||||||| ||  ||| | | |||| | ||||||    
T  8391929 tctcgaatggttttcttaggtcttcatatacctcctttaacatgactctccttcatttgatctactcttcttacaacggcatctacgggtc-tcctctct 8391831  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| |||||  || |||   |||||||||||||||||||||||||||    
T  8391830 acatgtccaaacaatctaaacctattttctaccaacttttctactatag 8391782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 634 - 773
Target Start/End: Original strand, 32082879 - 32083017
Alignment:
Q  634 gttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccca 733  Q
    |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| | |||||| |||| |||    
T  32082879 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtc-tcctctctgcatgtcca 32082977  T
Q  734 aatcatataaggttattttctaccaacttttctactatag 773  Q
    || ||| ||||  |||||||||||||||||||||||||||    
T  32082978 aaccatctaagcctattttctaccaacttttctactatag 32083017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 536 - 773
Target Start/End: Original strand, 9599432 - 9599666
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagt 635  Q
    ||||||||||| |||||| | ||||  ||||||||||||| ||||| |||||| |||||||| | || || |  ||  | |||||  |||||||| ||||    
T  9599432 gctacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatt--tcctaatagtttctcttgtagt 9599529  T
Q  636 tttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaa 735  Q
    ||| |||||||||||||||| |||| ||| | ||||||||||||||||||||||||||  ||| | ||||| ||||||||  ||| | |  |||||| ||    
T  9599530 ttttctaggtcttcctctacctcttatgatctgactctcctccatctgatctactctttgtactataacatctgcaggtc-atctatttatatgcccgaa 9599628  T
Q  736 tcatataaggttattttctaccaacttttctactatag 773  Q
     ||  ||||  |||||||||||| ||||||||||||||    
T  9599629 ccacctaagcctattttctaccatcttttctactatag 9599666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 525 - 694
Target Start/End: Original strand, 37462903 - 37463070
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||| ||||| |||||||| ||| |||||||| |||| || |  |  || || ||  ||    
T  37462903 aagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccatatttg-atcaaactcattaacctctaaa--tcattcctgatcgtt 37462999  T
Q  625 tctcttatagttttcctaggtcttcctctacttctttt-gacccgactctcctccatctgatctactcttc 694  Q
    |||||||||||||| ||||||  |||||||| |||||| || |||||||||||||||||||||||||||||    
T  37463000 tctcttatagtttttctaggtaatcctctacctctttttgatccgactctcctccatctgatctactcttc 37463070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 642 - 768
Target Start/End: Original strand, 27847947 - 27848072
Alignment:
Q  642 aggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatat 741  Q
    |||||||||||||| |||| ||| | |||||||||||||||||| |||||||| ||| ||| ||| | |||||| |||||||| |||||||||| ||  |    
T  27847947 aggtcttcctctacctcttctgagctgactctcctccatctgatatactcttcatactacagcatctacaggtc-ttctctctgcatgcccaaaccacct 27848045  T
Q  742 aaggttattttctaccaacttttctac 768  Q
    ||| ||||||||||||| |||||||||    
T  27848046 aagcttattttctaccatcttttctac 27848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 525 - 694
Target Start/End: Original strand, 52561616 - 52561783
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| ||||||||||||||| |||||  | |||| ||||||| |  ||| ||||||||||||||||||||| |||| || |   |||||| |||   |    
T  52561616 aagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactcattaacctctaaa---tctttcctaacagt 52561712  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttc 694  Q
    ||||||||||||||| ||| |||||||||||| |||| | | |  ||||||||||||||||||||||||||    
T  52561713 ttctcttatagtttttctaagtcttcctctacctcttctaatctaactctcctccatctgatctactcttc 52561783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 548 - 702
Target Start/End: Complemental strand, 478909 - 478758
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtct 647  Q
    |||||| |||||||| |||||||||||  |||| ||  |||||||||||| |||| || || ||  | |||||  |||||||||||| |||  |||||||    
T  478909 aaattatgtcatagtattctatcataac-catacttccatccaactcattaacctctaaaactt--tcctaatagtttctcttatagattttgtaggtct 478813  T
Q  648 tcctctacttcttttgacccgactctcctccatctgatctactcttcttacgaca 702  Q
    |||||||  ||||||||||  |||||| | |||||||||||||||||||||||||    
T  478812 tcctctaactcttttgacctaactctctttcatctgatctactcttcttacgaca 478758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 773
Target Start/End: Original strand, 48431529 - 48431678
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    ||||||||||||||||  | ||||||||||||| |||| | | |||||| |||||||||||||| |||||  |||| |||| || | || ||| ||||||    
T  48431529 tttctcttatagtttttttgggtcttcctctacctcttgtaatccgactatcctccatctgatcaactctctttactacaaaatctacaagtc-ttctct 48431627  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||||||||| ||  ||||  ||||||| |||| ||||||||||||||    
T  48431628 ctacatgcccaaaccacctaagcctattttccaccatcttttctactatag 48431678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 557 - 706
Target Start/End: Original strand, 18469141 - 18469288
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    |||| ||||| ||||||||  ||||||| ||||||||||||||||| | |||  | || ||||   ||||||||||| |||| ||| |||||| |||||     
T  18469141 cataatgttcgatcataaactatatttgtatccaactcattgacctct-taatat-ttcctaaaagtttctcttataatttttctaagtcttcatctacc 18469238  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacat 706  Q
    |||||||| |||||||| ||||||||||| |||||||| ||| |||||||    
T  18469239 tcttttgatccgactcttctccatctgatttactcttcgtactacaacat 18469288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 24020294 - 24020371
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| || |||| ||||||| |||| | | |||||||||||||||||||||| |||||||||||||||||||||||    
T  24020294 aagtggggttggctgcatggatcaaatgacgccatagtgttctatcataaatcaaatttggatccaactcattgacct 24020371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 9509566 - 9509328
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctctt 630  Q
    |||||||||||||||  ||||| | |||| ||||| |||||||| ||||||||| || ||||||||   || || |   |||||| ||||  ||| ||||    
T  9509566 gtcggctacatggatcgaattacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaa---tctttcctaatagtttatctt 9509470  T
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgc 730  Q
    |||||||| |||||||||||||||| |||| | |   |||||||||||||||||||||||||   ||| | | ||| | | |||| |||||||| |||||    
T  9509469 atagtttttctaggtcttcctctacctcttctaatatgactctcctccatctgatctactctaagtactaaagcatataccggtc-ttctctctacatgc 9509371  T
Q  731 ccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||  |  ||||  |||||| ||||| ||||||||||||||    
T  9509370 ccaaactacctaagcctattttttaccatcttttctactatag 9509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 525 - 644
Target Start/End: Original strand, 12930338 - 12930455
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || ||||||| |||| |||||| |||||| | |||||||||||||||||||||||||||||||| | | |||  ||| || ||  |||| |||    
T  12930338 aagtggggttggctacacggatcaaattacgtcataatcttctatcataaatcatatttggatccaactcactaatctt--taaatttttcataataatt 12930435  T
Q  625 tctcttatagttttcctagg 644  Q
    ||||||||| ||||||||||    
T  12930436 tctcttataattttcctagg 12930455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 41560484 - 41560412
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||  |||||||||||||||||||||    
T  41560484 aagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcatt 41560412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 631 - 694
Target Start/End: Original strand, 36624003 - 36624066
Alignment:
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttc 694  Q
    |||||||  |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  36624003 atagtttctctaggtcttcctctacctcttctgatccgactctcctccatctgatctactcttc 36624066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 675
Target Start/End: Complemental strand, 4415597 - 4415455
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | |||| |||||||| | ||||||||||| |||||||||||||||||  | ||| |  ||||||||| ||||||  |    
T  4415597 gtcggctacatggatcaaatgatgccataatgttctataaaaaatcatatttagatccaactcattgacc--tctaaatcttttctaatggtttctcgaa 4415500  T
Q  632 tagttttcctaggtcttcctcta-cttcttttgacccgactctcc 675  Q
    | |||||| ||||| |||||||| ||| |||| ||| ||||||||    
T  4415499 tggttttcttaggttttcctctacctttttttaacctgactctcc 4415455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 4707248 - 4707324
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| |||||||||||| || |||||| | ||||||||||||||||||| || |||||||||||||||||| ||||    
T  4707248 aagtggggtcggctacatg-atcaaattacgccatagtgttctatcataaaccaaatttggatccaactcattaacct 4707324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 590
Target Start/End: Original strand, 28090721 - 28090786
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatcca 590  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||| ||||||||||||||    
T  28090721 aagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 8796464 - 8796392
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| |||||||||||||||||||||| | |||| |||||||||||||| |||||||  |||||| |||||    
T  8796464 aagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcatt 8796392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 698
Target Start/End: Original strand, 32404553 - 32404724
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| ||||||||||||||| |||||| | |||  |||| ||||||||| ||| |||||||  |||||||| | || || |   |||||| ||||  |    
T  32404553 aagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaaa---tctttcctaatagt 32404649  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    |||||||||||||||  ||||||||||||||| |||| |||   |||| ||||||||||  |||||||| |||||    
T  32404650 ttctcttatagtttttgtaggtcttcctctacctcttgtgatatgactatcctccatcttctctactctccttac 32404724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 27520241 - 27520345
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||| ||||||| || ||||||  ||||| ||||||||||||||||||||||||||||| |||||| |  | | ||| || ||||||||  |||||||||    
T  27520241 gtcgactacatgaatcaaattacatcataatgttctatcataaatcatatttggatccagctcattaa--tctctaaattttttctaatagtttctctta 27520338  T
Q  632 tagtttt 638  Q
    |||||||    
T  27520339 tagtttt 27520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 2544848 - 2544774
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattga 599  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||| ||||| ||||||| | |||||||||||||    
T  2544848 aagtggggtcggctacatggatcaaattatgccataatgttctattataaaccatatttcgctccaactcattga 2544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 773
Target Start/End: Complemental strand, 5338883 - 5338734
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||||||||||| |||||||| | ||| | |||  ||| | || | |||||||||||||||||||| ||||| | | ||| | |||||| ||||||    
T  5338883 tttctcttatagtttttctaggtctacttctgcctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtc-ttctct 5338785  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||||||||| ||  |||| | | |||| |||| ||||||||||||||    
T  5338784 ctgcatgcccaaaccacctaagctcagtttccaccatcttttctactatag 5338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 40568437 - 40568511
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattga 599  Q
    |||||| || |||||||||||| |||||| | |||||| |||||||||||| ||||||| | |||||||||||||    
T  40568437 aagtggggttggctacatggatcaaattacgccatagttttctatcataaaccatattttggtccaactcattga 40568511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 587
Target Start/End: Original strand, 44941803 - 44941865
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggat 587  Q
    |||||| ||||||||||||||| |||||| | ||||||||||||||||||| || ||||||||    
T  44941803 aagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccaaatttggat 44941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 613 - 698
Target Start/End: Original strand, 34827217 - 34827302
Alignment:
Q  613 tttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||||||  |||||||||||||||| |||||||||||| || || || | |||  |||||||||||||| ||||||| |||||||    
T  34827217 tttctaatagtttctcttatagtttttctaggtcttcctttattttttctaaccttactctcctccatctaatctacttttcttac 34827302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 596
Target Start/End: Original strand, 10200340 - 10200404
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcat 596  Q
    ||||||||||||||| ||||||   |||  |||||||||||||| ||||||||||||||||||||    
T  10200340 gtcggctacatggatcaaattacaccatgatgttctatcataaaccatatttggatccaactcat 10200404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 19908062 - 19908134
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| |||||| |  ||| ||||| |||||||| |||||||| ||||||||||||    
T  19908062 aagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcatt 19908134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 602
Target Start/End: Original strand, 32079202 - 32079279
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||||| ||||||||||| ||| |||| | | ||  ||||||||||||||| || |||||||||||||||||||||||    
T  32079202 ccaagtggggtcggctacatcgatcaaatgacgcca--gtgttctatcataaaccagatttggatccaactcattgacct 32079279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 45510860 - 45510932
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| |||||||||||||||||||||| |  || ||||||||||||||| ||||||  ||| |||||||||    
T  45510860 aagtggggtcggctacatggattaaattacgctatggtgttctatcataaaccatattccgattcaactcatt 45510932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 52532643 - 52532715
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| |||||||||||| || |||||| | |||| |||||||||||||| ||||||| | |||||||||||    
T  52532643 aagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcatt 52532715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 602
Target Start/End: Original strand, 52739547 - 52739615
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctat-cataaatcatatttggatccaactcattgacct 602  Q
    ||||||||| || ||||||||||||| |||||||| ||||||| |||||||||| ||||||||| ||||    
T  52739547 ggctacatgaatcaaattaagtcataatgttctatccataaattatatttggattcaactcattaacct 52739615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 538 - 597
Target Start/End: Complemental strand, 6084217 - 6084158
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||| |||||| | |||| |||||||||||||| ||||||| |||||||||||||    
T  6084217 tacatggatcaaattacgccatattgttctatcataaaccatattttgatccaactcatt 6084158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 535 - 597
Target Start/End: Complemental strand, 5338958 - 5338896
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||| |||||| | |||| |||||||| |||||||| |||| |||||||||||||    
T  5338958 ggctacatggatcaaattacgccataatgttctataataaatcacatttcgatccaactcatt 5338896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 32082783 - 32082861
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaa-gtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| |  | | ||||||||||||| ||| |||||||| |||||||||||||||||    
T  32082783 aagtggggtcggctacatggatcaaatgactgccgtagtgttctatcaaaaaccatatttgaatccaactcattgacct 32082861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 535 - 597
Target Start/End: Original strand, 43375635 - 43375697
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||| |||||| |||||| ||||||||||| || ||||||| | |||||||||||    
T  43375635 ggctacatggatcaaattatgtcataatgttctatcatgaaccatatttcggtccaactcatt 43375697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 679 - 777
Target Start/End: Complemental strand, 51812628 - 51812531
Alignment:
Q  679 atctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatagttgt 777  Q
    |||||||||||| ||||||| |||| || | ||  | ||||||||| ||||||||||||| |||||  || |||| |||| ||||||||||||||||||    
T  51812628 atctgatctacttttcttactacaaaatctacaatt-tttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgt 51812531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 597
Target Start/End: Complemental strand, 19936708 - 19936643
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||| |||||| | | || ||||||||||| || |||||||||||| ||||||||    
T  19936708 gtcggctacatggatcaaattacgccgtaatgttctatcattaaccatatttggatctaactcatt 19936643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 574
Target Start/End: Complemental strand, 28533722 - 28533673
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataa 574  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||||||    
T  28533722 aagtggggtcggctacatggatcaaatgacgtcatagtgttctatcataa 28533673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 39140770 - 39140693
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| |||||||||||| || |||||| | |||| |||||||||  ||| ||||||||||||||||| ||| ||||    
T  39140770 aagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaattaacct 39140693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 586
Target Start/End: Original strand, 1290059 - 1290119
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttgga 586  Q
    ||||| |||||| |||||||| |||||| | |||| |||||||||||||| ||||||||||    
T  1290059 agtggggtcggccacatggatcaaattatgccataatgttctatcataaaccatatttgga 1290119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 28511828 - 28511900
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||| ||| |||||| | |||| |||||||||||||| ||| ||| | |||||||||||    
T  28511828 aagtggggtcggctacattgatcaaattacgccataatgttctatcataaaccatgttttggtccaactcatt 28511900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 34444611 - 34444539
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||| ||| ||||||   |||| |||| ||| ||||| |||||||||||||||||||||    
T  34444611 aagtggggtcggctacatagatcaaattacaccataatgttttattataaaccatatttggatccaactcatt 34444539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 48431426 - 48431498
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||| |||||| |||| |||||||| |||  |||| ||||| ||| |||||||||||||||||||||    
T  48431426 aagtggggtcagctacaaggatcaaattaagccatgatgttttatcacaaaccatatttggatccaactcatt 48431498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 588
Target Start/End: Original strand, 21769738 - 21769801
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatc 588  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||| ||| ||||||| ||||    
T  21769738 aagtggggtcggctacatggatcaaattacgccataatgttctatcacaaaccatatttagatc 21769801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 580
Target Start/End: Original strand, 26113474 - 26113521
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcata 580  Q
    |||||||||||||| |||||||| |||| |||||||||||||| ||||    
T  26113474 tcggctacatggatcaaattaagccataatgttctatcataaaccata 26113521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 583
Target Start/End: Original strand, 27072521 - 27072572
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatattt 583  Q
    ||||||||||||||| |||||| | |||| |||||||||||||| |||||||    
T  27072521 gtcggctacatggatcaaattacgccataatgttctatcataaaccatattt 27072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 46423243 - 46423317
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||   ||||| |||| ||| ||||||||||||||||||||||||||    
T  46423243 aagtggggtcggctacatggatcaaatgacgcca---tgttcaatcaaaaaccatatttggatccaactcattgacct 46423317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 773
Target Start/End: Complemental strand, 39140655 - 39140530
Alignment:
Q  647 ttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggt 746  Q
    ||||||||| |||| | | | ||||||| ||||||||||||||||||| ||| ||||||| |   |||| |||||||| |||||||||| ||  ||||      
T  39140655 ttcctctacctcttctaatctgactctcatccatctgatctactcttcgtactacaacatgtatcggtc-ttctctctacatgcccaaaccacctaagcc 39140557  T
Q  747 tattttctaccaacttttctactatag 773  Q
     ||||| | ||| ||||||||||||||    
T  39140556 aattttttgccatcttttctactatag 39140530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 539 - 597
Target Start/End: Original strand, 39776936 - 39776994
Alignment:
Q  539 acatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||| ||| |||||| | ||| ||||||||||||||| ||||||| |||||||||||||    
T  39776936 acattgatcaaattacgccattgtgttctatcataaaccatatttcgatccaactcatt 39776994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 602
Target Start/End: Original strand, 44905406 - 44905460
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| | ||||||||||||| ||||| |||||||||||| |||||||| ||||    
T  44905406 aaattatgccatagtgttctatgataaaccatatttggatcaaactcattaacct 44905460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 664
Target Start/End: Complemental strand, 8628189 - 8628148
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttga 664  Q
    ||||| |||||||||| |||||||||||||||| ||||||||    
T  8628189 tttctgttatagtttttctaggtcttcctctacctcttttga 8628148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 25715360 - 25715425
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||| |||||| | |||| | |||||||||||| ||||||| | | |||||||||    
T  25715360 gtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcatt 25715425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 593
Target Start/End: Complemental strand, 29129039 - 29128970
Alignment:
Q  525 aagtggcgtcggctacatgg-attaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||||||||||| || | ||||   |||| |||||||||||||| |||||||||||||||||    
T  29129039 aagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaact 29128970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 2e-57; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 36545404 - 36545159
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  36545404 aagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 36545307  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  |||| |||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  36545306 tctctaatagttttcctaggtcttcctctacgtcttttaacttgactatcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 36545208  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  36545207 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 36545159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 36565268 - 36565513
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  36565268 aagtggggtcggctacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 36565365  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| |||||||| |||||||| ||  ||| | | |||  ||||||||    
T  36565366 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctacccttcttaccacggcatctacgggt-attctctct 36565464  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  36565465 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 36565513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 12491165 - 12491410
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  12491165 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 12491262  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||| ||||| |||||| ||  ||||||||| ||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  12491263 tctctaatagttttcataggtcttcatctacctcttttaacttgactctccttcatttgatctactcttcttaccacggcatctacgggtc-ttctctct 12491361  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  12491362 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 12491410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 11523750 - 11523996
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  11523750 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 11523847  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||||    
T  11523848 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctct 11523946  T
Q  725 tcatgcccaaatcatat-aaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| | |||  ||||  |||||||||||||||||||||    
T  11523947 acatgcccaaaccatctaaagcctattaactaccaacttttctactatag 11523996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 40813579 - 40813334
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | ||||||||||||||||| | | || |||||||||||||||| |||||| || |  | |||||||||| ||    
T  40813579 aagtggggttggctacatggatcaaatgatgtcatagtgttctatcacacaccaaatttggatccaactcactgacctctaaa--tcctttctaatggtt 40813482  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | ||| || ||||||||    
T  40813481 tctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacagatc-ttctctct 40813383  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| |||   |||||||||||||||||||||||||||    
T  40813382 acatgcccaaaccatctaaacctattttctaccaacttttctactatag 40813334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 8879473 - 8879712
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||||||||||||| ||||  ||||| ||||||||| ||||||||||| ||||| ||||||  || ||| |  ||| ||||| ||    
T  8879473 aagtggagtcggctacatggattaaattacgtca--gtgttatatcataaaccatatttggattcaacttattgac--ttctaaatcatttttaatggtt 8879568  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    |||||||||||||||||| |||| |||| |  ||||| |||||||| ||||||||||||||| ||||||||||||||  ||    | |||| ||||||||    
T  8879569 tctcttatagttttcctacgtctccctcaagctctttggacccgaccctcctccatctgatcaactcttcttacgacggca----cgggtc-ttctctct 8879663  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||| |||||||||| ||||  |||||||||||||||||||||||||||    
T  8879664 acatacccaaatcatctaagtctattttctaccaacttttctactatag 8879712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 557 - 773
Target Start/End: Complemental strand, 18125395 - 18125183
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    |||||| |||||||||||||||||||||||||||||||||||||  || ||| |  ||||||||| ||||||| |||||||| |||||||| |||||||     
T  18125395 catagtattctatcataaatcatatttggatccaactcattgac--ttttaaatcttttctaatggtttctctaatagtttttctaggtctccctctacc 18125298  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    || ||| ||||||||||||||||| ||||||||| ||||||||||  ||| | | |||| |||||||| ||||  |||| ||| ||||  ||||||||||    
T  18125297 tc-tttaacccgactctcctccatttgatctactattcttacgacggcatctacgggtc-ttctctctacatgttcaaaccatctaagcctattttctac 18125200  T
Q  757 caacttttctactatag 773  Q
    |||||||||||||||||    
T  18125199 caacttttctactatag 18125183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 525 - 768
Target Start/End: Complemental strand, 37078004 - 37077768
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||| ||||||| |||||| ||||  |||||||||| |  |   |||||||||||||||||||||||| || |  | |||||||||| ||    
T  37078004 aagtggggtcggctgcatggatcaaattacgtca--gtgttctatcttccaaagtatttggatccaactcattgacctctaaa--tcctttctaatggtt 37077909  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||||||||||||||  ||| |   ||||   ||||||    
T  37077908 tctcttataattttcctaggtcttcatctacctattttgacccgactctcctccatttgatctactcttcttacgacggcatctatgggtc---ctctct 37077812  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctac 768  Q
     |||||||||| ||| ||||  ||||||||||||||||||||||    
T  37077811 acatgcccaaaccatctaagtctattttctaccaacttttctac 37077768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 42854038 - 42854276
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | | ||||||||| ||||| ||| |||||||||||||||||||||||||| || |  ||  |||||||| ||||||  |    
T  42854038 gtcggctacatggatcaaatgacgccatagtgttatatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatggtttctcgaa 42854135  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    | |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| |||||||| |||| |    
T  42854136 tggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtc-ttctctctacatgtc 42854234  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||| ||| ||||||    
T  42854235 caaaccatctaagcctattttctaccaacttctctgctatag 42854276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 525 - 698
Target Start/End: Original strand, 42469754 - 42469925
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||| || |  ||  |||||||| ||    
T  42469754 aagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatggtt 42469851  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||  || |||||| ||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||    
T  42469852 tctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttac 42469925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 701
Target Start/End: Complemental strand, 21121400 - 21121227
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||| || |||||| | ||||||||||||||||||| |||||| |||||||||||||||||  || ||| | |||||||||| ||    
T  21121400 aagtggggtcggctacatg-atcaaattacgccatagtgttctatcataaaccatattaggatccaactcattgac--ttctaaatcctttctaatggtt 21121304  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    ||||| |||| |||| ||||||| ||||||| |||||| |||  |||||| ||||| ||||||||||||||||||||    
T  21121303 tctctaatagatttcttaggtctccctctacctcttttaacctaactctcgtccatttgatctactcttcttacgac 21121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 558 - 773
Target Start/End: Original strand, 36395009 - 36395222
Alignment:
Q  558 atagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctactt 657  Q
    |||||||||||||||| | || ||||||||| ||||||||||||| || |  | |||||||| | ||||||  ||||||||||||||||||||| ||| |    
T  36395009 atagtgttctatcatacaccaaatttggatctaactcattgacctctaaa--tcctttctaacggtttctcaaatagttttcctaggtcttcctatacct 36395106  T
Q  658 cttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatat-aaggttattttctac 756  Q
    ||||| ||  |||| |||||||| ||||||||||||||||| ||  ||| | |||||| |||||||| |||||||||| ||| | |||  ||||||||||    
T  36395107 cttttaacttgactttcctccatttgatctactcttcttaccacggcatctacaggtc-ttctctctacatgcccaaaccatctaaagcctattttctac 36395205  T
Q  757 caacttttctactatag 773  Q
    |||||||||||||||||    
T  36395206 caacttttctactatag 36395222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 557 - 773
Target Start/End: Complemental strand, 39947080 - 39946867
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    ||||| ||||||||||||| || |||||||| |||||||||||||| || |  ||  |||||||| ||||||| |||||||| ||||||| ||||||||     
T  39947080 catagcgttctatcataaaccaaatttggattcaactcattgacctctaaatctt--ttctaatggtttctctaatagtttttctaggtcgtcctctacc 39946983  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    |||| | ||  || |||||||||| ||||||||||||||||||||  ||| | |||||| |||| ||| |||| ||||| ||| ||||  ||||||||||    
T  39946982 tcttctaacttgagtctcctccatttgatctactcttcttacgacggcatctacaggtc-ttctttctacatgtccaaaccatctaagcctattttctac 39946884  T
Q  757 caacttttctactatag 773  Q
    |||||||||||||||||    
T  39946883 caacttttctactatag 39946867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 2796808 - 2796567
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| ||||||| || |||||| | |||| |||||||||| ||| || |||||  | ||||| |||||||| || |  | |||||||||| ||    
T  2796808 aagtggggtcgtctacatgaatcaaattacgccatactgttctatcaaaaaccaaatttgagttcaactaattgacctctaaa--tcctttctaatggtt 2796711  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  ||||||||||||| |||| |||||||||||| |   ||| | |||     |||||||    
T  2796710 tctctaatagttttcttaggtcttcctctacctcttttaacatgactctcctccatttgatttactcttcttacaatggcatctacag-----tctctct 2796616  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  2796615 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 2796567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 555 - 680
Target Start/End: Complemental strand, 2027755 - 2027632
Alignment:
Q  555 gtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctcta 654  Q
    ||||||||||||||||||||| |||||||| ||  ||||||||||||| || |  |  ||||||||| ||||||| ||||||||||||||||||||||||    
T  2027755 gtcatagtgttctatcataaaccatatttgaatataactcattgacctctaaa--tcatttctaatggtttctctaatagttttcctaggtcttcctcta 2027658  T
Q  655 cttcttttgacccgactctcctccat 680  Q
    | |||||| ||| |||||||||||||    
T  2027657 cctcttttaacctgactctcctccat 2027632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 525 - 694
Target Start/End: Complemental strand, 45419490 - 45419323
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||||   |||| |||||||||||||| || ||||||||| ||||||||    |||| |  ||  | |||||  ||    
T  45419490 aagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggatcaaactcattatgatttaaacctt--tcctaatagtt 45419393  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttc 694  Q
    |||||||||||||| |||||||||||||||| ||||  || | |||||||||||||||||||||||||||    
T  45419392 tctcttatagtttttctaggtcttcctctacctcttcagatctgactctcctccatctgatctactcttc 45419323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 535 - 735
Target Start/End: Complemental strand, 29520894 - 29520698
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatag 634  Q
    |||||||||||| |||||| | |||| |||||||||||||| ||||||||||||||||||||| |  | | ||| |  || ||||   ||||||||||||    
T  29520894 ggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaa--tctctaaatcgttcctaacagtttctcttatag 29520797  T
Q  635 ttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaa 734  Q
    |||| ||||| |||||||||| |||| |||   |||| |||||||||||||||||||| ||||| |||| || | || ||| |||||||| |||||||||    
T  29520796 tttttctagg-cttcctctacctcttgtgatttgactatcctccatctgatctactctccttactacaaaatctacaagtc-ttctctctacatgcccaa 29520699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 532 - 698
Target Start/End: Original strand, 26904941 - 26905104
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||| ||| |||||| |||||| | ||||||||| ||| |||||  |||||||| ||||||| |||||||| || |  ||  |||||||| ||||||| |    
T  26904941 gtcgactatatggatcaaattacgacatagtgttttattataaactatatttgg-tccaacttattgacctctaaatctt--ttctaatggtttctctaa 26905037  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    |||||||||||||||| ||||||| |||||| | | ||||||| ||||| |||||||||||||||||    
T  26905038 tagttttcctaggtctccctctacctctttttatctgactctcttccatttgatctactcttcttac 26905104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 525 - 698
Target Start/End: Complemental strand, 8932958 - 8932787
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||| | | ||||||||| ||||| ||  ||||||| ||||||||||||| ||||||| |  ||  |||||||| ||    
T  8932958 aagtggggtcagctacatggatcaaatgacgccatagtgttttatcaaaagccatattttgatccaactcattaacctttaaatctt--ttctaatggtt 8932861  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||  || |||||| ||||||||||||||| |||||| ||  ||||||| ||||| |||| ||||||||||||    
T  8932860 tctcgaatggttttcttaggtcttcctctacctcttttaacttgactctcttccatttgatttactcttcttac 8932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 532 - 735
Target Start/End: Original strand, 43904699 - 43904899
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctctt 630  Q
    ||||||||||||||| |||||| | |||| |||||||||||||| ||||||| ||||||||||||| | || || |   ||| || |||   ||||||||    
T  43904699 gtcggctacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaa---tctctcataaccgtttctctt 43904795  T
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgc 730  Q
    ||||| || |||||||||||| ||| |||| | |   |||| |||||||||||||||| ||||||||| ||||||| |  ||||| |||||||| ||||     
T  43904796 atagtatttctaggtcttcctgtacctcttgtaatttgactatcctccatctgatctattcttcttactacaacatctataggtc-ttctctctacatgt 43904894  T
Q  731 ccaaa 735  Q
    |||||    
T  43904895 ccaaa 43904899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 44529480 - 44529403
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| || |||||||||||||||||||||||    
T  44529480 aagtggggtcggctacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactcattgacct 44529403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 634
Target Start/End: Complemental strand, 25300352 - 25300247
Alignment:
Q  527 gtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttc 626  Q
    |||| ||| ||||||| ||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||  | ||| | |||||||| | ||||    
T  25300352 gtggggtcagctacatagatcaaattatgtcatagtgttatatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaaaggtttc 25300255  T
Q  627 tcttatag 634  Q
    ||||||||    
T  25300254 tcttatag 25300247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 525 - 596
Target Start/End: Complemental strand, 490590 - 490519
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcat 596  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||| ||||||||||||||||||||    
T  490590 aagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcat 490519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 525 - 657
Target Start/End: Original strand, 14742109 - 14742236
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||   |||||||||||||||||||||||  || ||| |  ||||||||| ||    
T  14742109 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaa---atatttggatccaactcattgac--ttctaaatcttttctaatggtt 14742203  T
Q  625 tctcttatagttttcctaggtcttcctctactt 657  Q
    ||||  || |||||| |||||||||||||||||    
T  14742204 tctcgaatggttttcttaggtcttcctctactt 14742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 525 - 735
Target Start/End: Complemental strand, 42584613 - 42584419
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||| | || |||||| |||||| |||||||||||||| ||||||||||||||| ||||| |||| || |   ||||||            
T  42584613 aagtggggtcggctacaag-atcaaattacgtcataatgttctatcataaaccatatttggatccaaatcattaacctataga---tctttc-------- 42584526  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
       ||||||||||| |||||||||  ||||| |||||||| | |||   ||| ||||||||||||||||| ||| ||||||| | ||||| |||||||||    
T  42584525 ---cttatagtttttctaggtctttatctacctcttttgatctgacaaaccttcatctgatctactcttcgtactacaacatctacaggt-tttctctct 42584430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 653
Target Start/End: Original strand, 35914628 - 35914754
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||||| | |||| |||||||||||||| ||||||| | ||||||||||| | |||   ||||  || |||||  ||    
T  35914628 aagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcattaatctt--caagtctttcctaatagtt 35914725  T
Q  625 tctcttatagttttcctaggtcttcctct 653  Q
    |||||||||||||| ||| ||||||||||    
T  35914726 tctcttatagtttttctatgtcttcctct 35914754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 44047559 - 44047636
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||| ||||||||||| |||| | | ||| ||||||||||||||| || |||||||||||||||||||||||    
T  44047559 aagtggggtcagctacatggatcaaatgacgccatggtgttctatcataaaccaaatttggatccaactcattgacct 44047636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 23492289 - 23492217
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| |||||||||||||||||||| |   ||||||||||||||||| |||||||||  ||||||||||||    
T  23492289 aagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcatt 23492217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 527 - 634
Target Start/End: Complemental strand, 25289017 - 25288912
Alignment:
Q  527 gtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttc 626  Q
    |||| ||| |||| || ||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||  | ||| | |||||||| | ||||    
T  25289017 gtggggtcagctaaatagatcaaattatgtcatagagttatatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaaaggtttc 25288920  T
Q  627 tcttatag 634  Q
    ||||||||    
T  25288919 tcttatag 25288912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 538 - 703
Target Start/End: Complemental strand, 30559935 - 30559772
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttt-ctaatgatttctcttatagtt 636  Q
    ||||||||| |||||| |||||| |||||||||||||| ||||| ||||||||||||||| | || || |   ||||| || ||  ||||||||||||||    
T  30559935 tacatggatcaaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaa---tctttcctgatagtttctcttatagtt 30559839  T
Q  637 ttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaa 703  Q
    ||  || |||||| ||||  |||  ||| |||||| |||||||||||||| ||| | ||||| ||||    
T  30559838 tttttaagtcttcatctatctctagtgatccgactatcctccatctgatccactgtccttactacaa 30559772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 560 - 653
Target Start/End: Original strand, 35643668 - 35643759
Alignment:
Q  560 agtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatagttttcctaggtcttcctct 653  Q
    |||||||||||||||| ||||||| ||||||||||||| | || |   || |||||| |||| ||||||||||||||||| ||||||||||||||    
T  35643668 agtgttctatcataaaccatatttcgatccaactcattaatctct---agatctttcttaataatttctcttatagtttttctaggtcttcctct 35643759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 682
Target Start/End: Complemental strand, 2216540 - 2216388
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgattt 625  Q
    ||||| ||||||||||||||| ||||||    ||| |||||||||||||| |||||| |||||||||||||||| || || |   ||||  ||||  |||    
T  2216540 agtggggtcggctacatggatcaaattacactataatgttctatcataaa-catattaggatccaactcattgatctctaaa---tcttcttaatagttt 2216445  T
Q  626 ctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatct 682  Q
    |||||||  |||| |||||||||||||||| |||  ||| | |||| ||||||||||    
T  2216444 ctcttatgttttttctaggtcttcctctacctctagtgatctgactatcctccatct 2216388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 15215439 - 15215513
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattga 599  Q
    |||||| ||||||||||||||| | || | ||||||||||||||| | ||| |||||||||||| ||||||||||    
T  15215439 aagtggggtcggctacatggatcatatgacgtcatagtgttctattaaaaaccatatttggatcaaactcattga 15215513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 536 - 597
Target Start/End: Complemental strand, 21425290 - 21425229
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||| |||||| | |||| || ||||||||||||||||||| |||||||||||||    
T  21425290 gctacatggatcaaattatgccataatggtctatcataaatcatatttcgatccaactcatt 21425229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 25473430 - 25473507
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | |  |||||||||||||||| | || ||||||||| |||||||||||||    
T  25473430 aagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttggatcaaactcattgacct 25473507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 538 - 673
Target Start/End: Original strand, 28269720 - 28269851
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttt 637  Q
    ||||||||| |||||| ||||||  ||| |||||||| | | |||||||||||||||||| |||| || |   |||| |||||  ||||||||||| |||    
T  28269720 tacatggatcaaattatgtcataacgttatatcataattaa-atttggatccaactcattaacctctaaa---tcttgctaatagtttctcttataattt 28269815  T
Q  638 tcctaggtcttcctctacttcttttgacccgactct 673  Q
    | |||||||||| | ||| |||||||| ||||||||    
T  28269816 ttctaggtcttcatatacctcttttgatccgactct 28269851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 555 - 602
Target Start/End: Complemental strand, 12026002 - 12025955
Alignment:
Q  555 gtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  12026002 gtcatagtgttctatcaaaaaccatatttggatccaacttattgacct 12025955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 698
Target Start/End: Complemental strand, 32931215 - 32931045
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||| | ||||||| | ||||||||||| |  |||  || |  || |||||  ||    
T  32931215 aagtggggtcggctacatggatcaaattatgccataatgttctatcatacaccatatttcg-tccaactcattaa--tttcaaaatctttcctaatagtt 32931119  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||| ||||||||  ||||||||||||| | |||  |||   |||| |||||||||||||||| ||| |||||    
T  32931118 tctctgatagtttttttaggtcttcctctgcctctagtgatatgactatcctccatctgatctagtctccttac 32931045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 593
Target Start/End: Complemental strand, 31716064 - 31716007
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    ||||||||||| |||||| | |||| ||||||||| |||| |||||||||||||||||    
T  31716064 gctacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaact 31716007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 3464230 - 3464277
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgaccttta 605  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  3464230 cataatgttctatcataaattatatttgg-tccaactcattgaccttta 3464277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 12796916 - 12796972
Alignment:
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||| |||||| ||||||| ||||  |||||||||||||||||||| ||||||    
T  12796916 ttctctctgcatgcctaaatcatctaagcctattttctaccaacttttcttctatag 12796972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 717
Target Start/End: Complemental strand, 5908863 - 5908711
Alignment:
Q  563 gttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctacttctttt 662  Q
    ||||||||||||||||||||| ||||||||||||| | | ||  |  |  ||| ||||  |||||||||||||||| |||||||||||| |   |||  |    
T  5908863 gttctatcataaatcatattttgatccaactcattaatccttgga--tcttttttaatagtttctcttatagtttttctaggtcttcctatgtctctagt 5908766  T
Q  663 gacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctt 717  Q
    || | |||  ||||||| |||||||||||| ||||| |||| || | ||||||||    
T  5908765 gatctgaccatcctccacctgatctactctccttactacaaaatctacaggtctt 5908711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 773
Target Start/End: Original strand, 6510614 - 6510700
Alignment:
Q  686 ctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||||||||||||||||  ||| | ||| |||| |||||| |||||||||| ||| |||  || ||||||||||||||||||| |||||    
T  6510614 ctactcttcttacgacggcatctacagatctt-ctctctacatgcccaaaccatctaaatttgttttctaccaacttttctattatag 6510700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 773
Target Start/End: Original strand, 25985722 - 25985871
Alignment:
Q  622 atttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctc 721  Q
    |||||||||||| |||| |||| ||| || |||| |||   || | ||||| | ||||||||||||||||| ||||| |||| |||  |||||| |||||    
T  25985722 atttctcttatattttttctagatctacccctacctctagcgatctgactcccttccatctgatctactctccttactacaaaattcacaggtc-ttctc 25985820  T
Q  722 tcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||  |||| |||| || |||||  || ||||||| ||||||||||||||||    
T  25985821 tctaaatgcacaaacca-ataagtctagtttctacaaacttttctactatag 25985871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 698
Target Start/End: Complemental strand, 29700435 - 29700360
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    |||||||| ||||||| |||||||||||||||| |||  |||   |||| |||||||||| ||||||||| |||||    
T  29700435 tttctcttttagtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactctccttac 29700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 587
Target Start/End: Original strand, 8255568 - 8255622
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggat 587  Q
    |||||||||||||| |||||| | |||| || ||||||||||| |||||||||||    
T  8255568 tcggctacatggatcaaattacgccatattggtctatcataaaccatatttggat 8255622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 28255023 - 28255073
Alignment:
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatc 681  Q
    |||||||| |||||||||||||||| |||||| | |||||||| |||||||    
T  28255023 atagtttttctaggtcttcctctacctctttttatccgactctactccatc 28255073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 30689990 - 30689940
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaa 575  Q
    |||||| ||||||||||||||| |||||| |||||| |||| |||||||||    
T  30689990 aagtggggtcggctacatggatcaaattacgtcataatgttatatcataaa 30689940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 17491688 - 17491753
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||||||| ||  || | |||| |||||||||||||| ||||||| | |||||||||||    
T  17491688 gtcggctacatggatcaacatacgccataatgttctatcataaaccatattttggtccaactcatt 17491753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 27556329 - 27556378
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataa 574  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||    
T  27556329 aagtggggtcggctacatggatcaaattatgccataatgttctatcataa 27556378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 597
Target Start/End: Original strand, 41971828 - 41971889
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||| |||| ||||||||||| ||||||||||||||  ||||||   |||||||||||    
T  41971828 gctacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcatt 41971889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 45041343 - 45041419
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||| ||||||||||| |||||| | |||| ||  |||||||||| |||| |||||||||||||||| ||||    
T  45041343 aagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccata-ttggatccaactcattaacct 45041419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 3e-53; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 30031504 - 30031266
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||||| | ||||||||||||||||||| |||||||  ||||||||||||||||| || |  | |||||||||  ||||||| |    
T  30031504 gtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgacctctaaa--tcctttctaattgtttctctaa 30031407  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||||||| ||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||  ||| |   |||| |||||||| |||| |    
T  30031406 tagttttcctaggtctccctctacctcttttaacctgactctcctccatttgatctactcttcttacgacggcatctatgggtc-ttctctctacatgtc 30031308  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||| |||| ||||  |||||||||||||||||||||||||||    
T  30031307 caactcatctaagcctattttctaccaacttttctactatag 30031266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 701
Target Start/End: Complemental strand, 12890830 - 12890656
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | ||||||||||||||||||| |||||||||||| ||||||||||| | || |  | |||||||||| ||    
T  12890830 aagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcattgacgtctaaa--tcctttctaatggtt 12890733  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    ||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  12890732 tctcttatagttttcctaggtcttcatctacctcttttgaccttactctcctccatctgatctactcttcttacgac 12890656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 28085631 - 28085386
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| |   ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  28085631 aagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 28085534  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  |||||| |||||| ||||||||||||||||| ||   |||| | |||| ||||||||    
T  28085533 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctactccatttgatctactcttcttaccactttatttacgggtc-ttctctct 28085435  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  28085434 acatggccaaaccatctaagcctattttctaccaacttttctactatag 28085386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 533 - 773
Target Start/End: Complemental strand, 32756168 - 32755931
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttat 632  Q
    |||||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  ||  |||||||| ||||||| ||    
T  32756168 tcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatctt--ttctaatggtttctctaat 32756071  T
Q  633 agttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgccc 732  Q
    |||||||||||||||| |||||| |||||| ||  ||||||||||||| ||||||||||||||||  || |||| | | |||| ||| |||| |||| ||    
T  32756070 agttttcctaggtctttctctacctcttttaacttgactctcctccatttgatctactcttcttattacgacatcttcgggtc-ttccctctacatgacc 32755972  T
Q  733 aaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||| ||| ||||  |||||||||||||||||||||||||||    
T  32755971 aaaccatctaagcctattttctaccaacttttctactatag 32755931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 21351871 - 21352109
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| || | | ||||||||||||||||| |||||||||||||||||| ||||||||||  | ||| |  ||||||||| |||||||      
T  21351871 gtcggctacatggatcaattaacgtcatagtgttctatcaaaaatcatatttggatccagctcattgacc--tctaaatcttttctaatggtttctctat 21351968  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    | |||||| ||||||||||||||| |||||| ||| |||||| |||||| || |||| |||||| || |   |||   |||||| |||||||| |||| |    
T  21351969 tggttttcttaggtcttcctctacctcttttaacctgactcttctccatttgttctattcttctaacaatggcatcgacaggtc-ttctctctacatgtc 21352067  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||| ||||  ||||||||||||| |||||||||||||    
T  21352068 caaatcatctaagcctattttctaccaatttttctactatag 21352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 537 - 702
Target Start/End: Complemental strand, 5081083 - 5080920
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagtt 636  Q
    |||||||||| |||| | || ||||||||||||||||||||||||||| ||||||||||||||||| || |  |  |||  |||||||||||| ||||||    
T  5081083 ctacatggatcaaatgacgttatagtgttctatcataaatcatatttgtatccaactcattgacctctaaa--taattttgaatgatttctctaatagtt 5080986  T
Q  637 ttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgaca 702  Q
    ||||||||||||| ||||  |||||| ||  ||||||||||||| |||| ||||||||||||||||    
T  5080985 ttcctaggtcttcatctatctcttttaacgagactctcctccatttgatttactcttcttacgaca 5080920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 536 - 769
Target Start/End: Original strand, 35043479 - 35043709
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagt 635  Q
    ||||||| ||| |||| | ||||||||||||||||| ||| |||||||||||||||| ||||||||| || |  | |||||||||| ||||||| || ||    
T  35043479 gctacattgatcaaatgacgtcatagtgttctatcaaaaaccatatttggatccaacacattgacctctaaa--tcctttctaatggtttctctaatggt 35043576  T
Q  636 tttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaa 735  Q
    |||| ||||||||| |||||||||||| ||| ||||||| ||||| ||||||||| ||||||| ||  ||| | | |||  |||||||| |||| |||||    
T  35043577 tttcttaggtcttcatctacttcttttaacctgactctcgtccatttgatctacttttcttacaacggcatctacgggt-attctctctacatgtccaaa 35043675  T
Q  736 tcatataaggttattttctaccaacttttctact 769  Q
      || ||||  ||||||| |||||||||||||||    
T  35043676 caatctaagcctattttcaaccaacttttctact 35043709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 5258175 - 5258420
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctt-tctaatgat 623  Q
    |||||| ||||||||| ||||| |||| | | |||||||||  |||| ||| |||||||||||| | ||||||||||| || |   |||| |||||||||    
T  5258175 aagtggggtcggctacgtggatcaaatgacgccatagtgtttaatcaaaaaccatatttggatctagctcattgacctctaaa---tcttgtctaatgat 5258271  T
Q  624 ttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    |||||  || |||||| |||||||| |||||| |||||| ||  ||||||||||||| ||||||||||||||||| ||   || | | |||| |||||||    
T  5258272 ttctcgaatggttttcttaggtctttctctacctcttttaacatgactctcctccatttgatctactcttcttacaacggaatctacgggtc-ttctctc 5258370  T
Q  724 ttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    | |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  5258371 tacatgtccaaaccatctaagcctattttctaccaacttttctactatag 5258420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 538 - 773
Target Start/End: Complemental strand, 5632064 - 5631832
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttt 637  Q
    ||||||||| |||| | ||||||||||| ||||| ||| |||||||||||||||||||||||||| || |  ||  |||||||| ||||||  || ||||    
T  5632064 tacatggatcaaatgacgtcatagtgttatatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatggtttctcgaatggttt 5631967  T
Q  638 tcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatc 737  Q
    || || |||||||| |   |||||| | | ||||||||||||| ||||||||| |||||||||   ||| | | |||| |||||||| |||| ||||| |    
T  5631966 tcttaagtcttcctttgtctcttttaatctgactctcctccatttgatctactattcttacgaaggcatctacgggtc-ttctctctacatgtccaaacc 5631868  T
Q  738 atataaggttattttctaccaacttttctactatag 773  Q
    || ||||  |||||||||||||||||||||||||||    
T  5631867 atctaagcatattttctaccaacttttctactatag 5631832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 557 - 770
Target Start/End: Original strand, 9593767 - 9593975
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    |||| |||||||||||||| |||||| |||||||||||||| | || ||  |||  || |||||  ||||||||||| |||| ||||||||||||||||     
T  9593767 cataatgttctatcataaaccatattgggatccaactcattaatctcta--agtctttcctaatagtttctcttataatttttctaggtcttcctctacc 9593864  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    ||||  ||   ||||||||||||||||||||||||||||||| ||| ||| | || ||| |||||||| |||||||||| ||  ||||  ||||||||||    
T  9593865 tctt--gatttgactctcctccatctgatctactcttcttactacagcatctacatgtc-ttctctctacatgcccaaaccacctaagcctattttctac 9593961  T
Q  757 caacttttctacta 770  Q
    || |||||||||||    
T  9593962 catcttttctacta 9593975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 608409 - 608167
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||| | |||||||| |||||||| ||| ||||||||||||||||||||||| |  | ||| |  ||||||||| ||||||  |    
T  608409 gtcggctacatggatcaaatgacgtcatagtattctatcaaaaaccatatttggatccaactcattgaac--tctaaatcttttctaatggtttctcgaa 608312  T
Q  632 tagttttc----ctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttca 727  Q
    ||||||||     ||||||||| || || |||||| | | ||||||||||||| ||||| ||||||||||| |   ||| | |||||| |||||||| ||    
T  608311 tagttttcttaattaggtcttcatcaacctcttttaatctgactctcctccatttgatccactcttcttacaaaggcatctacaggtc-ttctctctaca 608213  T
Q  728 tgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || ||||| ||| ||||  ||||||||| |||||||||||||||||    
T  608212 tgtccaaaccatctaagcctattttctatcaacttttctactatag 608167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 541 - 773
Target Start/End: Complemental strand, 33497198 - 33496971
Alignment:
Q  541 atggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcc 640  Q
    |||||| |||||| |  |||||||| |||||||||||||||||||||||||||||||||||||  ||| | |||||||| | ||||||| |||||||| |    
T  33497198 atggatcaaattacgctatagtgttatatcataaatcatatttggatccaactcattgacctt--taaatcctttctaaaggtttctctaatagtttttc 33497101  T
Q  641 taggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcata 740  Q
    ||| ||| ||||||| |||||| ||  ||  ||||| ||| |||||| |||||||||||||| | ||| | |||| |||||||| |||| ||||| |||     
T  33497100 tagatctccctctacctcttttaacttga--ctccttcatttgatcttctcttcttacgacagcgtttac-ggtc-ttctctctacatgtccaaaccatc 33497005  T
Q  741 taaggtta-ttttctaccaacttttctactatag 773  Q
    ||||  || |||||||| ||||||||||| ||||    
T  33497004 taagcctatttttctactaacttttctaccatag 33496971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 631 - 772
Target Start/End: Original strand, 10099990 - 10100130
Alignment:
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgc 730  Q
    ||||||||||||||||||||||||| |||||| | | ||||||||| ||| ||||||||||||||||| ||  ||| | |  ||| |||||||| ||||     
T  10099990 atagttttcctaggtcttcctctacctcttttaaactgactctccttcatttgatctactcttcttacaacggcatctacgagtc-ttctctctacatgt 10100088  T
Q  731 ccaaatcatataaggttattttctaccaacttttctactata 772  Q
    ||||| ||| |||| |||||||||||||||||||||||||||    
T  10100089 ccaaaccatctaagcttattttctaccaacttttctactata 10100130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 20427671 - 20427908
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||| ||||||||   | |||||| |||||| | ||| ||||||||||||||||||||| |||| || |   | ||||||||| ||||||| |    
T  20427671 gtcggctacattgattaaatgtcgccatagtattctattaaaaaccatatttggatccaactcattaacctctaaa---tttttctaatggtttctctaa 20427767  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||| |||||||||||| || |||| | ||| ||||| |||| || |||| |||||||||||| ||  ||| | | |||| |||||| | || |      
T  20427768 tagttttcttaggtcttcctcaacctcttgtaacctgactcccctctatttgatttactcttcttacaacggcatctacgggtc-ttctctatacacgtt 20427866  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| ||||  |||||||||||||||||||||||||||    
T  20427867 caaaccatctaagcctattttctaccaacttttctactatag 20427908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 525 - 655
Target Start/End: Original strand, 34143792 - 34143920
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| |||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||| ||||| ||    
T  34143792 aagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttgtaatggtt 34143889  T
Q  625 tctcttatagttttcctaggtcttcctctac 655  Q
    ||||| |||||||||||||||||||||||||    
T  34143890 tctctaatagttttcctaggtcttcctctac 34143920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 525 - 655
Target Start/End: Original strand, 34156408 - 34156536
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| |||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||| ||||| ||    
T  34156408 aagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttgtaatggtt 34156505  T
Q  625 tctcttatagttttcctaggtcttcctctac 655  Q
    ||||| |||||||||||||||||||||||||    
T  34156506 tctctaatagttttcctaggtcttcctctac 34156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 613 - 698
Target Start/End: Complemental strand, 7133915 - 7133830
Alignment:
Q  613 tttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||    
T  7133915 tttctaatggtttctctaatagtttttctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttac 7133830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 613 - 698
Target Start/End: Complemental strand, 7136838 - 7136753
Alignment:
Q  613 tttctaatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||    
T  7136838 tttctaatggtttctctaatagtttttctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttac 7136753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 532 - 773
Target Start/End: Complemental strand, 24666059 - 24665820
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttata-agttctttctaatgatttctctt 630  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || | | ||||   ||||  ||||||||    
T  24666059 gtcggctacacagatcaaattaagtcataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttct---taatagtttctctt 24665963  T
Q  631 atagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac-aacatttgcaggtctttctctcttcatg 729  Q
     ||||| | ||| | |||||||| | |||  ||| |||||| | || ||||||||||||||| ||||| || || || | |||||| |||||||| ||||    
T  24665962 gtagttattctatgacttcctctgcctctggtgatccgactatgcttcatctgatctactctccttactacaaaaatctacaggtc-ttctctctacatg 24665864  T
Q  730 cccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||| ||  ||||  ||||||||||||  |||||||||||||    
T  24665863 tccaaaccacctaagcctattttctaccatattttctactatag 24665820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 653
Target Start/End: Original strand, 34532 - 34658
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| ||| ||||||||||| |||||| | |||| |||||||||||||| |||||||  |||||||||||| | ||||   || |||||| ||||| |    
T  34532 aagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaatcttt---agatctttcttaatggt 34628  T
Q  624 ttctcttatagttttcctaggtcttcctct 653  Q
    ||||||||||||||| ||||||||||||||    
T  34629 ttctcttatagtttttctaggtcttcctct 34658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 635 - 773
Target Start/End: Complemental strand, 14030954 - 14030817
Alignment:
Q  635 ttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaa 734  Q
    ||||| ||||||||||||||| |||||| | |||||||||| | || ||||||||||||||||| ||  ||||| || ||| |||||| | |||| ||||    
T  14030954 ttttcttaggtcttcctctacctcttttaatccgactctccactatttgatctactcttcttacaacggcatttacatgtc-ttctctatacatgtccaa 14030856  T
Q  735 atcatataaggttattttctaccaacttttctactatag 773  Q
    | ||| ||||  |||| ||||||||||||||||||||||    
T  14030855 accatttaagcctattatctaccaacttttctactatag 14030817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 668 - 772
Target Start/End: Complemental strand, 30679520 - 30679417
Alignment:
Q  668 gactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctaccaacttttcta 767  Q
    |||||| |||||| ||||||||| |||||||||| |||| | | |||||  |||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  30679520 gactctactccatttgatctactattcttacgacgacatctacgggtctc-ctctctacatgcccaaatcatctaagcctattttctaccaacttttcta 30679422  T
Q  768 ctata 772  Q
    |||||    
T  30679421 ctata 30679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 533 - 689
Target Start/End: Complemental strand, 5096081 - 5095927
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttcttt-ctaatgatttctctta 631  Q
    |||||||||| ||| |||||| | |||| |||||||||||||| ||||||| ||||||||||||| |||  || |   ||||| ||||   ||||||||     
T  5096081 tcggctacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcattaaccactaaa---tctttcctaagagtttctcttc 5095985  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctac 689  Q
    ||||||| |||||||||||||||| |||| ||| |  |||||| ||||||||||||||    
T  5095984 tagtttttctaggtcttcctctacctcttctgatctaactctcttccatctgatctac 5095927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 525 - 695
Target Start/End: Complemental strand, 9707025 - 9706857
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| ||||||||||||||||||||| |||  | ||| | ||| |||| | ||    
T  9707025 aagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcattaacc--tctaaatccttcctaacggtt 9706928  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttct 695  Q
    | ||| || |||| | |||  |||||  ||| |||||| ||| |||||| |||||| ||||||||||||||    
T  9706927 tatctaatggtttacttagcccttcccgtacctcttttaacctgactcttctccatttgatctactcttct 9706857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 617 - 773
Target Start/End: Complemental strand, 2689799 - 2689650
Alignment:
Q  617 taatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtct 716  Q
    ||||| |||||||||||||||| |||||||| |||||      ||||||  |||||| ||| ||||||||||||||||||| |||  ||| | || |||     
T  2689799 taatggtttctcttatagtttttctaggtctacctct------tttgacatgactctactctatctgatctactcttcttatgacggcatctacatgtc- 2689707  T
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||| ||||| |||||||| ||||  |||||||||| |||||||| |||||||    
T  2689706 ttctctctacatgctcaaatcatctaagcctattttctacaaacttttcaactatag 2689650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 3206486 - 3206563
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  3206486 aagtggggtcggctacatggatcaaatgacgccatagtgttctattaaaaaccatatttggatccaactcattgacct 3206563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 31819086 - 31819009
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||||    
T  31819086 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacct 31819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 34934857 - 34934934
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||||    
T  34934857 aagtggggtcggctacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactcattgacct 34934934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 597
Target Start/End: Complemental strand, 31818786 - 31818714
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| |||||| | |||| |||||||||||||| |||| || |||||||||||||    
T  31818786 aagtggggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcatt 31818714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 694
Target Start/End: Original strand, 28026896 - 28027021
Alignment:
Q  567 tatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctcttatagttttcctaggtcttcctctacttcttttgac 665  Q
    ||||||||| |||||||| || ||| ||||| |||| || |   |||||| ||||| ||| ||||||||||||  ||||||||||||||| |||| | |     
T  28026896 tatcataaaccatatttgaatacaaatcattaacctgtaaa---tctttcataatggtttttcttatagtttttttaggtcttcctctacctcttctaat 28026992  T
Q  666 ccgactctcctccatctgatctactcttc 694  Q
    | |||||||||||||||||| ||||||||    
T  28026993 ctgactctcctccatctgatatactcttc 28027021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 644 - 698
Target Start/End: Complemental strand, 26291917 - 26291863
Alignment:
Q  644 gtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||| ||||||    
T  26291917 gtcttcctctacgtcttttgatcacactctcctccatctgatctactcatcttac 26291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 532 - 596
Target Start/End: Complemental strand, 2079529 - 2079465
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcat 596  Q
    |||||||||||||||||||||| |  ||| || ||||||||||||||||||| | || |||||||    
T  2079529 gtcggctacatggattaaattacgctataatgctctatcataaatcatatttcggtcaaactcat 2079465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 597
Target Start/End: Original strand, 12133929 - 12134001
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| ||||||||||||||| | |||| | |||| |||||||| || ||||| |||| |||||||||||||    
T  12133929 aagtggggtcggctacatggatcagattatgccataatgttctattatgaatcacatttcgatccaactcatt 12134001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 773
Target Start/End: Complemental strand, 12890641 - 12890594
Alignment:
Q  726 catgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  12890641 catgcccaaaccatgtaagcctattttctaccaacttttctactatag 12890594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 602
Target Start/End: Complemental strand, 14031043 - 14030973
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    ||||| || |||||| |||| | || ||||| |||||||| |||||||||||||||| ||| |||||||||    
T  14031043 gtcggttatatggatcaaatgacgttatagtattctatcaaaaatcatatttggatctaacccattgacct 14030973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 573
Target Start/End: Original strand, 1615257 - 1615298
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcata 573  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  1615257 gtcggctacatggatcaaatgacgtcatagtgttctatcata 1615298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 597
Target Start/End: Original strand, 3210546 - 3210607
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||||||| ||||||   |||| ||||||||||||| ||||||||  ||||||||||||    
T  3210546 gctacatggatcaaattacaccataatgttctatcataactcatatttccatccaactcatt 3210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 692
Target Start/End: Original strand, 31831982 - 31832051
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactct 692  Q
    ||||||| |||||||| |||||  |||||||| ||||  ||| | |||| ||||||||||||||||||||    
T  31831982 tttctctgatagtttttctaggctttcctctatttctgatgatctgactatcctccatctgatctactct 31832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 31723 - 31478
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| |  ||| |||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  31723 aagtggggtcggctacatggatcaaatgacttcacagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 31626  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||| ||||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| |   ||| | | |||| ||||||||    
T  31625 tctctaatagttttcctgggtcttcctctacatcttttaacttgactctcctccatttgatctactcttcttaccatggcatctacgggtc-ttctctct 31527  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  31526 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 31478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 3866327 - 3866082
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  3866327 aagtggggtcggctacatggatcaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 3866230  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||| ||||||||| |||||| |   | ||||||||||| ||||||||||||||||| || |||| | | |||| ||||||||    
T  3866229 tctctaatagttttcctaggttttcctctacctcttttaatttgtctctcctccatttgatctactcttcttaccacgacatctacgggtc-ttctctct 3866131  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||||| |||| ||| ||||  |||||||||||||||||| ||||||||    
T  3866130 acatgcacaaaccatctaagcctattttctaccaacttttttactatag 3866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 36183706 - 36183461
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| ||||     ||||||||||||||||| |||| |||||||||||||||||||||  || ||| | |||||||||| ||    
T  36183706 aagtggggtcggctacatggatcaaatggcaccatagtgttctatcatacatcaaatttggatccaactcattgac--ttctaaatcctttctaatggtt 36183609  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| | ||||||||||||||| ||  ||| | | |||| ||||||||    
T  36183608 tctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacggcatctacgggtc-ttctctct 36183510  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||| ||| ||  |||| ||||||||||||||||||||||||||||    
T  36183509 acatgccgaaaccaactaagattattttctaccaacttttctactatag 36183461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 38430139 - 38429894
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||| || |  ||  |||||||| ||    
T  38430139 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatggtt 38430042  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| |||||| |    
T  38430041 tctcgaatggttttcttaggtcttcctctacttcttttaacctgactctcctccatttgatctactcttcttacaacggcatatacgggtc-ttctcttt 38429943  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  38429942 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 38429894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 45367652 - 45367897
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||| |||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||| |||  | ||| | |||||||||||||    
T  45367652 aagtggggtcggcgacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcatttacc--tctaaatcctttctaatgatt 45367749  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| || |||||| |  |||||||||||| |||||| ||  ||||||||||||| |||||||| ||||| || ||  ||| | | |||| ||||||||    
T  45367750 tctctaatggttttcttgagtcttcctctacctcttttaactagactctcctccatttgatctacccttctaacaacggcatctacgggtc-ttctctct 45367848  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  45367849 acatgtccaaaccatctaaggttattttctaccaacttttctactatag 45367897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 12734955 - 12734709
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||| |||||||||| ||||||   ||||||||||||||||||| |||||||||||||||||||||||||  | ||| | |||||||||| ||    
T  12734955 aagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaatggtt 12734858  T
Q  625 tctcttatagttttcctaggtcttcctcta-cttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctc 723  Q
    ||||| ||||||||||||||||| |||||| | |||||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | |||| ||||||     
T  12734857 tctctaatagttttcctaggtctccctctaccctcttttaacctgactctcctccatttgatctactcttcttaccacggcatctacgggtc-ttctctt 12734759  T
Q  724 ttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    | |||| ||||| ||| ||||  ||||||||||||| |||||||||||||    
T  12734758 tacatgtccaaaccatctaagcctattttctaccaatttttctactatag 12734709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 2610843 - 2610598
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||| ||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  2610843 aagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 2610746  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  ||||||| ||||| ||||||||||||||||| || |||| | |  ||| ||||||||    
T  2610745 tctctaatagttttcataggtcttcctctacctcttttaacttgactctcatccatttgatctactcttcttaccacgacatctacgtgtc-ttctctct 2610647  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  ||||||||||||||||||| |||||||    
T  2610646 acatgcccaaaccatctaagcctattttctaccaacttttccactatag 2610598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 8181035 - 8180790
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| |    |||||||||||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  8181035 aagtggggtcggctacatggatcaaatgacactatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 8180938  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    | ||| |||||||||||| ||||||||||||  ||||| ||  ||||||||||||| ||||||||||||||||| ||  |||   |||||| ||||||||    
T  8180937 tatctaatagttttcctatgtcttcctctaccgcttttaacttgactctcctccatttgatctactcttcttaccacggcatccacaggtc-ttctctct 8180839  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  8180838 acatgcccaaaccatctaagcttattttctaccaacttttctactatag 8180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 25834933 - 25834691
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | || |||||||||||||||| |||||||||||||||||||||||||  | ||| | |||||||||| ||    
T  25834933 aagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaatggtt 25834836  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||| ||| ||||||||||||||||||||||| |||||| |||  |  ||||||||| ||||||||||||||||| ||  |||   |||||| ||||||||    
T  25834835 tct-ttaaagttttcctaggtcttcctctacctcttttaacctaa--ctcctccatttgatctactcttcttacaacggcatccacaggtc-ttctctct 25834740  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  25834739 acatgtccaaaccatctaagcctattttctaccaacttttctactatag 25834691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 11992135 - 11992380
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||| | | |||| |||||||||| |||||||||||||||| ||||||||||||| || |  | |||||||||||||    
T  11992135 aagtggggtcagctacatggatcaaataacgccataatgttctatcaaaaatcatatttggatctaactcattgacctctaaa--tcctttctaatgatt 11992232  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    || || || |||||| ||||||||||| ||| |||||| ||||||||||||||||| ||||| |||||||| || ||  ||| | | |||| ||||||||    
T  11992233 tccctaatggttttcttaggtcttcctttacctcttttaacccgactctcctccatttgatccactcttctaacaacggcatctacgggtc-ttctctct 11992331  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
      ||| ||||| ||| |||| ||||||||||||||||||||||||||||    
T  11992332 atatgtccaaaccatctaagcttattttctaccaacttttctactatag 11992380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 525 - 762
Target Start/End: Original strand, 451675 - 451909
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| |  | |||||||||||||||| |||||| || |  | |||||||||| ||    
T  451675 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacactaaatttggatccaactcactgacctctaaa--tcctttctaatggtt 451772  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| | |||| ||  ||||||||||||| ||||||||||||||||| ||  ||| | | ||||||| |||||    
T  451773 tctctaatagttttcctaggtcttcctctaccttttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttt-tctct 451871  T
Q  725 tcatgcccaaatcatataaggttattttctaccaactt 762  Q
     |||||||||| ||| ||||  ||||||||||||||||    
T  451872 acatgcccaaaccatctaagcctattttctaccaactt 451909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 525 - 698
Target Start/End: Complemental strand, 28508933 - 28508762
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  28508933 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 28508836  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  ||||||||||||| |||||||||||| ||||    
T  28508835 tctctaatagttttcctaggtcttcctctacatcttttaacttgactctcctccatttgatctactcttattac 28508762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 38452713 - 38452957
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||||||  ||| |   ||||||||| ||||||| | || ||||||||||||||||||||||| || |  | |||||||||| ||    
T  38452713 aagtggggtcggctacatggatcgaatgacaccatagtgttttatcatacaccaaatttggatccaactcattgacctctaaa--tcctttctaatggtt 38452810  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||||| |||||| ||  |||| |||||||| ||||||| ||||||||| ||  ||| | | |||| ||||||||    
T  38452811 tctctaatagttttcctaggtcttcctctacctcttttaacttgactttcctccatttgatcta-tcttcttaccacggcatctacgggtc-ttctctct 38452908  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  38452909 acatgcccaaaccatctaagcctattttctaccaacttttctactatag 38452957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 525 - 793
Target Start/End: Original strand, 24583658 - 24583924
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaa--tcatatttggatccaactcattgacctttataagttctttctaatga 622  Q
    |||||| |||||| |||| |||||||||| |||||||||| |||||| |||  ||| ||||| ||||||||||||||||| || |  | ||||||||||     
T  24583658 aagtggggtcggcaacattgattaaattacgtcatagtgtgctatcacaaaactcaaatttg-atccaactcattgacctctaaa--tcctttctaatgg 24583754  T
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||||  |||||||  |  |||||| ||||  |||||| ||  ||||||||||||| ||||||||||||||||||||| ||| | | |||||| ||||    
T  24583755 tttctctattagtttttttttgtcttcatctatctcttttaacttgactctcctccatttgatctactcttcttacgacagcatctacgggtctt-ctct 24583853  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatagttgtcattcttaatcctatc 793  Q
    || |||||||||| ||| ||||  ||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  24583854 ctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgtcattcttaatcatatc 24583924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 525 - 678
Target Start/End: Complemental strand, 31959776 - 31959625
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||  | ||| | |||||||||| ||    
T  31959776 aagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcattgacc--tctaaatcctttctaatggtt 31959679  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctcc 678  Q
    |||||||||||||||||||||||||  |||  |||||||||| |||||||||||    
T  31959678 tctcttatagttttcctaggtcttcgcctaactcttttgacctgactctcctcc 31959625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 41763070 - 41763314
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | |   ||||||||||| ||| ||||||||||||||||| |||||||||   || || ||||||||| ||    
T  41763070 aagtggggtcggctacatggatcaaatgacgcccgggtgttctatcaaaaaacatatttggatccaactaattgacctt---aaattttttctaatggtt 41763166  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||  || |||||| ||||||||||||||| | |||| ||| ||||||||||||| ||||||||| ||||||| ||  ||| | |||||| ||||||||    
T  41763167 tctcgaatggttttcttaggtcttcctctaccttttttaacctgactctcctccatttgatctacttttcttacaacggcatctacaggtc-ttctctct 41763265  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     |||| ||||| ||  ||||  |||||||||||||||||||||||||||    
T  41763266 gcatgtccaaaccacctaagcctattttctaccaacttttctactatag 41763314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 525 - 773
Target Start/End: Original strand, 3243680 - 3243925
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||| ||||| |||| | | ||||||||||||||||| | || | ||||||||||||||||||||| || |  | |||||||||| ||    
T  3243680 aagtggggtcggctacctggatcaaatgacgccatagtgttctatcatacaccaaacttggatccaactcattgacctctaaa--tcctttctaatggtt 3243777  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||||||| | |||||| ||  ||||||||||||| ||||||| ||||||||| ||  ||| | | |||| ||||||||    
T  3243778 tctctaatagttttcctaggtcttcctctgcctcttttaacttgactctcctccatttgatctattcttcttaccacggcatctacgggtc-ttctctct 3243876  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
     ||| |||||| ||| ||||  ||||||| | |||||||| ||||||||    
T  3243877 acattcccaaaccatctaagcctattttccatcaacttttttactatag 3243925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 525 - 735
Target Start/End: Original strand, 7326187 - 7326394
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| || |||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  |  ||||||||| ||    
T  7326187 aagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaa--tcatttctaatggtt 7326284  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| |||||||||||| |||||||||||| |||||| ||  ||||||||| ||| ||||||||||||||||| ||  ||| | |||||| ||||||||    
T  7326285 tctctaatagttttcctatgtcttcctctacctcttttaacttgactctccttcatttgatctactcttcttaccacggcatctacaggtc-ttctctct 7326383  T
Q  725 tcatgcccaaa 735  Q
     ||||||||||    
T  7326384 acatgcccaaa 7326394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 4807850 - 4807606
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | | |||||||||||||| || | |  ||||||||||||||||||||||| || |  | |||||||||| ||    
T  4807850 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcgtacaccgaatttggatccaactcattgacctctaaa--tactttctaatggtt 4807753  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||||||| ||||| |||||| ||  ||||||||| ||| ||||||||||||||||| || |||| | |  ||| ||||||||    
T  4807752 tctctaatagttttcctaggtcttcatctacctcttttaacttgactctccttcatttgatctactcttcttaccacgacatctacgagtc-ttctctct 4807654  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
      ||||| |||  || ||||  || ||||||||||||||||||||||||    
T  4807653 atatgccgaaactatctaagccta-tttctaccaacttttctactatag 4807606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 538 - 773
Target Start/End: Original strand, 18424417 - 18424649
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttt 637  Q
    ||||||||| |||| | ||||||||||||||||||||| |||||| ||||| |||| ||||| || || |  | |||| ||||| ||||||| |||||||    
T  18424417 tacatggatcaaatgacgtcatagtgttctatcataaaccatattcggatcaaacttattgatctctaaa--tcctttataatggtttctctaatagttt 18424514  T
Q  638 tcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatc 737  Q
    ||||| |||||||||||| |||||| ||| ||||||| ||||  ||||||| |||||||||| |  ||| | | ||||  ||||||| |||| ||||| |    
T  18424515 tcctatgtcttcctctacctcttttaacctgactctcatccaattgatctaatcttcttacgtcggcatctacgggtc-gtctctctacatgtccaaacc 18424613  T
Q  738 atataaggttattttctaccaacttttctactatag 773  Q
    || ||||  |||||||||||||||||||||||||||    
T  18424614 atctaagcctattttctaccaacttttctactatag 18424649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 557 - 762
Target Start/End: Original strand, 6237812 - 6238014
Alignment:
Q  557 catagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagttttcctaggtcttcctctact 656  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||| || |  |  ||||||||| ||| |||| ||||||| ||||||||| ||||||     
T  6237812 catagtgttctatcataaactatatttgaatccaactgattgacctctaaa--tcatttctaatggtttatcttctagtttttctaggtcttactctacc 6237909  T
Q  657 tcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaatcatataaggttattttctac 756  Q
    |||||||||  | |||||||||||||||||||||||||||||||| || ||| | |||| | |||||| |||| ||||| ||| ||||  | ||||||||    
T  6237910 tcttttgacatgtctctcctccatctgatctactcttcttacgacgacgtttacgggtc-tactctctacatgtccaaaccatctaagcatgttttctac 6238008  T
Q  757 caactt 762  Q
    ||||||    
T  6238009 caactt 6238014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 525 - 662
Target Start/End: Complemental strand, 35643203 - 35643068
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||||| ||||||| | ||||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  35643203 aagtggggtcggctacatgtattaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 35643106  T
Q  625 tctcttatagttttcctaggtcttcctctacttctttt 662  Q
    ||||| |||||||||||||||||| |||||| ||||||    
T  35643105 tctctaatagttttcctaggtctttctctacctctttt 35643068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 524 - 773
Target Start/End: Original strand, 41197253 - 41197500
Alignment:
Q  524 caagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgat 623  Q
    ||||||| |||| |||||||||| |||| | | |||| |||||||||| ||| |||||| ||||||||||| ||||||  | ||| |  ||| ||||| |    
T  41197253 caagtggggtcgactacatggatcaaatgacgccataatgttctatcaaaaaccatattgggatccaactcgttgacc--tctaaatcttttataatggt 41197350  T
Q  624 ttctcttatagttttcctaggtcttcctcta-cttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctct 722  Q
    |||||  || |||||| |||||||| ||||| ||| |||| ||| ||||||||||||| ||||||||||||||||| ||  ||| | | | || ||||||    
T  41197351 ttctcaaatggttttcttaggtctttctctacctttttttaacctgactctcctccatttgatctactcttcttacaacggcatctacggatc-ttctct 41197449  T
Q  723 cttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    || |||| ||||| ||| ||||  ||||||||||||||||||||| |||||    
T  41197450 ctacatgtccaaaccatctaagcctattttctaccaacttttctattatag 41197500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 537 - 698
Target Start/End: Complemental strand, 39029824 - 39029665
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagtt 636  Q
    |||||||||| |||| | | |||| |||||||||| ||| |||||||||||||||||||||||||| || |  ||  |||||||| ||||||  ||  ||    
T  39029824 ctacatggatcaaatgacgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatggtttctcgaatgttt 39029727  T
Q  637 ttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 698  Q
    ||| ||||||||||||||| |||||| ||| |||| |||||||  |||||||||||||||||    
T  39029726 ttcttaggtcttcctctacctctttttacctgactttcctccaattgatctactcttcttac 39029665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 525 - 640
Target Start/End: Original strand, 9996653 - 9996766
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | |||||||||  |||||||| |||||||||||||||||| ||||||  | ||| | |||||||||| ||    
T  9996653 aagtggggtcggctacatggatcaaattatgccatagtgtttaatcataaaccatatttggatccaactcgttgacc--tctaaatcctttctaatggtt 9996750  T
Q  625 tctcttatagttttcc 640  Q
    ||||||||||||||||    
T  9996751 tctcttatagttttcc 9996766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 525 - 734
Target Start/End: Complemental strand, 18959166 - 18958960
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| ||||||||||| |||||| | |||| |||||||||||| | ||||||| ||||||||||||| | ||  |  |||  || || ||  ||    
T  18959166 aagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcattaatctcca--agtctttccttatagtt 18959069  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    |||||| ||||||| |||||||||||||| | |||  ||| | |||| |||||||||||||||||||| ||||| |||| |  |||||||| ||||||||    
T  18959068 tctcttgtagtttttctaggtcttcctctgcctctgatgatctgactatcctccatctgatctactctccttactacaaaagctgcaggtc-ttctctct 18958970  T
Q  725 tcatgcccaa 734  Q
     |||||||||    
T  18958969 gcatgcccaa 18958960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 694
Target Start/End: Complemental strand, 13149579 - 13149419
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctctta 631  Q
    ||||||| |||||| |||||| |||||| ||||||||||| ||  |||||||||| | ||||||| |||| || |   |||||| ||||  |||||||||    
T  13149579 tcggctatatggatcaaattatgtcataatgttctatcatcaacgatatttggattctactcattaacctctaaa---tctttcataatagtttctctta 13149483  T
Q  632 tagttttcctaggtcttcctct-acttcttttgacccgactctcctccatctgatctactcttc 694  Q
    ||||||||||| |||||||||| || |||| ||| | |||| |||||||||| |||||||||||    
T  13149482 tagttttcctaagtcttcctctaacatcttctgatctgactttcctccatcttatctactcttc 13149419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 525 - 655
Target Start/End: Original strand, 43573157 - 43573284
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||||| | ||||  |||| |||||||||||||||||||||||||||||| ||||   ||| |  || ||| |  ||    
T  43573157 aagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcattaacct---taaatctttcctagttgtt 43573253  T
Q  625 tctcttatagttttcctaggtcttcctctac 655  Q
    | |||||||||||| ||||||||||||||||    
T  43573254 tttcttatagtttttctaggtcttcctctac 43573284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 525 - 600
Target Start/End: Original strand, 3635350 - 3635425
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgac 600  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||| ||| ||||||||||||||||||||||||    
T  3635350 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgac 3635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 525 - 663
Target Start/End: Original strand, 45543100 - 45543235
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| ||| || | |||| |||||||||||||| |||||||||||| |||||||| |||  | ||| |  ||||||||  ||    
T  45543100 aagtggggtcggctacatagatcaaagtacgccataatgttctatcataaaccatatttggatcgaactcatt-acc--tctaaatcttttctaatagtt 45543196  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttg 663  Q
    |||||||||||||| | |||||||||||||| |||||||    
T  45543197 tctcttatagtttttccaggtcttcctctacctcttttg 45543235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 767
Target Start/End: Complemental strand, 23997857 - 23997630
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||| |||||| || |||| | | ||||||||| ||||| ||| |||||||||||||||||||||||||| || |  ||  ||||||||       
T  23997857 aagtggggtcggatacatgaatcaaataacgccatagtgttttatcaaaaaccatatttggatccaactcattgacctctaaatctt--ttctaatg--- 23997763  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
             |||||| ||||||||| || || |||||| ||| ||||||||||||| ||||||||||||||||| || |||| | | |||| |||| |||    
T  23997762 ---------gttttcttaggtcttcttccacctcttttaacctgactctcctccatttgatctactcttcttacaacgacatctacgggtc-ttctttct 23997673  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttcta 767  Q
     |||| | ||| ||| ||||| ||||||||||||| |||||||    
T  23997672 acatgtcaaaaccatctaaggctattttctaccaaattttcta 23997630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 227444 - 227367
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||||||||||||||||    
T  227444 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacct 227367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 9496121 - 9496044
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| || |||||||||||| |||||| | |||| |||||||||||||| ||||||||||||||||||||| ||||    
T  9496121 aagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaacct 9496044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 30306287 - 30306210
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||||| || |||||||||||||||| ||||||    
T  30306287 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcaatgacct 30306210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 605
Target Start/End: Original strand, 9394655 - 9394737
Alignment:
Q  523 ccaagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgaccttta 605  Q
    |||||||| || |||||||||||| |||||||| |||| || ||||| ||||| |||||| |||||||||||||| |||||||    
T  9394655 ccaagtggggttggctacatggataaaattaagccataatgctctattataaaccatattcggatccaactcattaaccttta 9394737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 525 - 595
Target Start/End: Original strand, 39709228 - 39709298
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactca 595  Q
    |||||| ||||||||||||||| |||||| | |||||||||| |||||||| ||||||| |||||||||||    
T  39709228 aagtggggtcggctacatggatcaaattacgccatagtgttcaatcataaaccatattttgatccaactca 39709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 525 - 654
Target Start/End: Complemental strand, 33287676 - 33287549
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgat 623  Q
    |||||| || ||||||| |||| ||| || |||||| |||||||||||||| ||||||| |||| |||||||| |  ||| | || |||||| ||||  |    
T  33287676 aagtggagttggctacaaggatcaaactatgtcataatgttctatcataaaccatatttcgatctaactcattaa--tttct-agatctttcttaatagt 33287580  T
Q  624 ttctcttatagttttcctaggtcttcctcta 654  Q
    ||||||||||||||| |||||||||||||||    
T  33287579 ttctcttatagtttttctaggtcttcctcta 33287549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 638
Target Start/End: Complemental strand, 41545637 - 41545549
Alignment:
Q  548 aaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagtttt 638  Q
    |||||||||||||||||||||||||||| |||||||| || |||||||| ||||| || |  |  ||| ||||| ||||||||||||||||    
T  41545637 aaattaagtcatagtgttctatcataaaccatatttgaattcaactcatggacctctaca--tcttttataatggtttctcttatagtttt 41545549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 597
Target Start/End: Original strand, 19336930 - 19336992
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||| |||||| | |||| |||||||||||||| ||||||| |||||||||||||    
T  19336930 ggctacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcatt 19336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 43751981 - 43752219
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||||| |||||||| ||||||   ||||||||||||||||| | ||| ||| | ||||||||||| |  |||  || |  || |||||  ||||||| |    
T  43751981 gtcggccacatggatcaaattacaacatagtgttctatcatacaccatctttcggtccaactcattaa--tttccaaatctttcctaatagtttctctga 43752078  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    ||||||| |||||||||||| | | ||   ||| | || | |||||||||||||||||||| | ||| |||  || |  ||||| |||||||| |||| |    
T  43752079 tagtttttctaggtcttcctatgcctccagtgatctgagtatcctccatctgatctactctccctactacataatctataggtc-ttctctctacatgtc 43752177  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||  ||||  |||||||||||| ||||||||||||||    
T  43752178 caaatcacctaagcctattttctaccaccttttctactatag 43752219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 535 - 602
Target Start/End: Original strand, 12882082 - 12882149
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||||||||| |||||| | || | |||||||||| ||| ||||||||||||||||||||| ||||    
T  12882082 ggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaacct 12882149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 543 - 602
Target Start/End: Complemental strand, 30743766 - 30743707
Alignment:
Q  543 ggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||| |||||| | |||| |||||||| ||||||||||||||||| ||||||||||||||    
T  30743766 ggatcaaattatgacatattgttctattataaatcatatttggattcaactcattgacct 30743707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 690
Target Start/End: Original strand, 13443942 - 13444098
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||| ||| |||| | | |||| |||||||| ||||| |||||||||  ||| |||||| |  | || || || |||| ||| |||||||| |    
T  13443942 gtcggctacatcgatcaaatgacgccataatgttctataataaaccatatttgggcccatctcattaatatctaaaattt-tttc-aataatttctctca 13444039  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctact 690  Q
    ||| ||| ||| || ||||||||| ||||||||   |||||||||||||||||||||||    
T  13444040 tagattttctaagttttcctctacctcttttgatttgactctcctccatctgatctact 13444098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 586
Target Start/End: Original strand, 9531627 - 9531688
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttgga 586  Q
    |||||| ||||||||||||||| |||||| | |||| ||||| |||||||| ||||||||||    
T  9531627 aagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatatttgga 9531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 582
Target Start/End: Original strand, 12520089 - 12520146
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatt 582  Q
    |||||| ||||||||||||||| |||||| | ||||||||| ||||||||| ||||||    
T  12520089 aagtggggtcggctacatggatcaaattacgccatagtgttttatcataaaccatatt 12520146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 692
Target Start/End: Original strand, 19235107 - 19235176
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactct 692  Q
    |||||||||||||||| |||||||||||||||  |||  |||   ||||| |||||||||||||||||||    
T  19235107 tttctcttatagtttttctaggtcttcctctatctctagtgatttgactcccctccatctgatctactct 19235176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 597
Target Start/End: Original strand, 35755279 - 35755344
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    ||||||| ||||||| |||||| | || | |||||||||||||| |||||||||||||||| ||||    
T  35755279 gtcggctgcatggatcaaattacggcacaatgttctatcataaaccatatttggatccaacccatt 35755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 593
Target Start/End: Original strand, 3720442 - 3720510
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaact 593  Q
    |||||| ||||||||||||||| ||||||   |||| |||||||||||||| ||| ||| |||||||||    
T  3720442 aagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccatttttcgatccaact 3720510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 11744676 - 11744600
Alignment:
Q  629 ttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaaca 705  Q
    |||||||||| ||| |||||||| |||  ||||||| |||||||||||||  ||| |||||||||| ||| ||||||    
T  11744676 ttatagtttttctatgtcttcctataccgcttttgatccgactctcctcctgctggtctactcttcgtactacaaca 11744600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 16097202 - 16097258
Alignment:
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||||| |||| ||||||||| ||||  ||||||||||||||||||||| |||||    
T  16097202 ttctctctacatgtccaaatcatctaagcctattttctaccaacttttctattatag 16097258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 525 - 589
Target Start/End: Original strand, 38328397 - 38328461
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatcc 589  Q
    |||||| ||||||||||||||| |||| ||| ||||||||||||||||  | || ||||||||||    
T  38328397 aagtggggtcggctacatggatcaaatgaagccatagtgttctatcatgcaccaaatttggatcc 38328461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 43238309 - 43238365
Alignment:
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||||| | |||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  43238309 ttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactatag 43238365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 655
Target Start/End: Complemental strand, 26671016 - 26670895
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttc-taatgatttctctt 630  Q
    ||||||||||||||| ||||||   |||  | |||||||||||||||||||| | ||||||||||| | || || |   |||||| ||||  ||||| ||    
T  26671016 gtcggctacatggatcaaattacaccattatattctatcataaatcatattttggtccaactcattaatctctaaa---tctttcttaatagtttctttt 26670920  T
Q  631 atagttttcctaggtcttcctctac 655  Q
    ||||||||  |||||||||||||||    
T  26670919 atagtttttgtaggtcttcctctac 26670895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 533 - 597
Target Start/End: Complemental strand, 11412957 - 11412890
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttcta---tcataaatcatatttggatccaactcatt 597  Q
    |||||||||||||| ||||||   |||| |||||||   ||||||| |||||||||||||||||||||    
T  11412957 tcggctacatggatcaaattacaccataatgttctactatcataaaccatatttggatccaactcatt 11412890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 596
Target Start/End: Complemental strand, 17581684 - 17581643
Alignment:
Q  555 gtcatagtgttctatcataaatcatatttggatccaactcat 596  Q
    |||||| |||||||||||||||||||||| ||| ||||||||    
T  17581684 gtcatattgttctatcataaatcatatttagattcaactcat 17581643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 597
Target Start/End: Complemental strand, 21834802 - 21834737
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||| |||||||||  ||| || |||||| |||||||||||||| || |||| |||||||||||||    
T  21834802 gtcgactacatggaccaaaatatgtcatattgttctatcataaaccaaatttagatccaactcatt 21834737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 580
Target Start/End: Original strand, 23915722 - 23915775
Alignment:
Q  527 gtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcata 580  Q
    |||| ||||||| ||||||| |||||| | ||||||||||||||||||| ||||    
T  23915722 gtggggtcggctgcatggatcaaattacgccatagtgttctatcataaaccata 23915775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 597
Target Start/End: Complemental strand, 36650686 - 36650625
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||| |||| |||||| || ||||||||||||||||||  |||||| |||| ||||||||    
T  36650686 gctacacggatcaaattacgttatagtgttctatcataaactatattttgatctaactcatt 36650625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 692
Target Start/End: Complemental strand, 42543394 - 42543325
Alignment:
Q  623 tttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactct 692  Q
    |||||||||||||||| |||||||| || |||| |||  ||| | ||||| ||||||| |||||||||||    
T  42543394 tttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatttgatctactct 42543325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 594
Target Start/End: Complemental strand, 45077984 - 45077915
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactc 594  Q
    |||||| ||||| ||||||||| |||||| | |||  ||||||||||||||  |||||| ||||||||||    
T  45077984 aagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactc 45077915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 773
Target Start/End: Complemental strand, 82973 - 82731
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||  | ||| | |||||||||| ||    
T  82973 aagtggggtcggctacatggatcaaatgacgtcatagtgttctatcataaatcatatttggatccaactcattgacc--tctaaatcctttctaatggtt 82876  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    |||| |||||||||||||||||||||||||| ||| || |||  |||||||||||| |||| ||| |||||||||||  ||| |   | || ||||||||    
T  82875 tctc-tatagttttcctaggtcttcctctacctctcttaacc--actctcctccatttgatatacccttcttacgactgcatctatggatc-ttctctct 82780  T
Q  725 tcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
      ||| ||||||||| ||||   ||||||||||||||||||||||||||    
T  82779 atatgtccaaatcatctaagcccattttctaccaacttttctactatag 82731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 536 - 773
Target Start/End: Original strand, 986 - 1220
Alignment:
Q  536 gctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagt 635  Q
    ||||||||||| |||| | | ||||||||||||||||| | || ||||||||||||||||||||||| || |  || |||  |||| ||||||| |||||    
T  986 gctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatctttttt--aatggtttctctaatagt 1083  T
Q  636 tttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaa 735  Q
    |||||||||||||||||||| |||||| |   |||||| |||||| ||||||||||||||||| ||  ||| | | |||| |||||||| |||| |||||    
T  1084 tttcctaggtcttcctctacctcttttaatttgactcttctccatttgatctactcttcttaccacggcatctacgggtc-ttctctctacatggccaaa 1182  T
Q  736 tcatataaggttattttctaccaacttttctactatag 773  Q
     ||| ||||  |||||||||||||||||||||||||||    
T  1183 ccatctaagcctattttctaccaacttttctactatag 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 537 - 769
Target Start/End: Original strand, 86648 - 86877
Alignment:
Q  537 ctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatagtt 636  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||   | ||||| || |  | ||||||| || ||||||| | ||||    
T  86648 ctacatggatcaaattacgtcatagtgttctatcatacatcatatttggatccaacctgtcgacctctaaa--tcctttctagtggtttctctaacagtt 86745  T
Q  637 ttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcccaaat 736  Q
    ||||||||||| | ||||| |||||| ||| ||||||||||||| ||||||||||||||||||||  ||| | | |||| |||||| | |||| |||||     
T  86746 ttcctaggtctccatctacctcttttaacctgactctcctccatttgatctactcttcttacgacggcatctacgggtc-ttctctttacatgtccaaac 86844  T
Q  737 catataaggttattttctaccaacttttctact 769  Q
     || ||||  |||||||||||||||||||||||    
T  86845 tatctaagactattttctaccaacttttctact 86877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 701
Target Start/End: Complemental strand, 4891 - 4717
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| |||||||||| |||| |||||| | ||||||||||||||||||| |||||||||||  ||||||||||| | || |  | |||||||||| ||    
T  4891 aagtggggtcggctacacggatcaaattacgccatagtgttctatcataaaccatatttggatttaactcattgacgtctaaa--tcctttctaatggtt 4794  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgac 701  Q
    |||||||| ||||||||| | |||| ||||| |||||| | |  |||||||||||||||||||||||||||||||||    
T  4793 tctcttatggttttcctacgccttcatctacctcttttaatcttactctcctccatctgatctactcttcttacgac 4717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 525 - 654
Target Start/End: Original strand, 25559 - 25686
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||||||| | || ||||||||||||||||||||||  | ||| | |||||||||| ||    
T  25559 aagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacc--tctaaatcctttctaatggtt 25656  T
Q  625 tctcttatagttttcctaggtcttcctcta 654  Q
    ||||| ||||||||||||||||||||||||    
T  25657 tctctaatagttttcctaggtcttcctcta 25686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 61; Significance: 9e-26; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 525 - 739
Target Start/End: Original strand, 11576 - 11785
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||||||| |||| | ||||||||  |||||||  || || |||||||||||||  ||||||  || ||| |||||||||| ||||    
T  11576 aagtggggtcggctacatggatcaaatgacgtcatagtactctatca--aaccaaatttggatccaaccaattgac--ttctaaattctttctaacgatt 11671  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctct 724  Q
    ||||| ||||||||||||||| ||| ||||| |||| | ||  ||||||| ||||| |||||||||||||||| |||  ||| | | |||| ||| ||||    
T  11672 tctctaatagttttcctaggtattcgtctacctcttctaacttgactctcatccatttgatctactcttcttatgacggcatctacgggtc-ttcgctct 11770  T
Q  725 tcatgcccaaatcat 739  Q
     ||||||||||||||    
T  11771 acatgcccaaatcat 11785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 11812 - 11868
Alignment:
Q  717 ttctctcttcatgcccaaatcatataaggttattttctaccaacttttctactatag 773  Q
    |||| ||| |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  11812 ttctgtctacatgcccaaatcatctaagcctattttctaccaacttttctactatag 11868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 535 - 643
Target Start/End: Complemental strand, 14828 - 14722
Alignment:
Q  535 ggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctcttatag 634  Q
    |||||||||||| |||||| | |||||||||| |||||||| |||||||| ||||||||||||||||||  ||| | |||||||||| ||||||||| ||    
T  14828 ggctacatggatcaaattacgccatagtgttcaatcataaaccatatttgaatccaactcattgacctt--taaatcctttctaatggtttctcttaaag 14731  T
Q  635 ttttcctag 643  Q
    |||||||||    
T  14730 ttttcctag 14722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 525 - 673
Target Start/End: Complemental strand, 16833 - 16687
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatt 624  Q
    |||||| ||||||||||| ||| |||| | | ||||||||||||||| ||| |||||||||||||||||||||||||  | ||| |  ||||||||| ||    
T  16833 aagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacc--tctaaatcttttctaatggtt 16736  T
Q  625 tctcttatagttttcctaggtcttcctctacttcttttgacccgactct 673  Q
    ||||  || |||||| ||||||||||||||| |||||| ||| ||||||    
T  16735 tctcgaatggttttcttaggtcttcctctacctcttttaacctgactct 16687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 773
Target Start/End: Original strand, 4315 - 4543
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    |||| |||||||||| |||| | ||||||||||||||| ||||| || |||| |||||||||||||||||  | ||| | |||||||||| ||||||| |    
T  4315 gtcgcctacatggatcaaataacgtcatagtgttctattataaaccaaatttagatccaactcattgacc--tctaaatcctttctaatggtttctctaa 4412  T
Q  632 tagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatttgcaggtctttctctcttcatgcc 731  Q
    |||||||||||          ||| |||||| ||  || |||||||||| ||||||||||||||||| ||| | | | |  ||| |||| ||| ||||||    
T  4413 tagttttccta----------tacctcttttaacttgattctcctccatttgatctactcttcttaccacagcttctacgagtc-ttctttctacatgcc 4501  T
Q  732 caaatcatataaggttattttctaccaacttttctactatag 773  Q
    ||||  || ||||  |||||| ||||||||||||||||||||    
T  4502 caaactatctaagcctattttttaccaacttttctactatag 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 653
Target Start/End: Original strand, 58260 - 58379
Alignment:
Q  532 gtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttctaatgatttctctta 631  Q
    ||||||||||||||| |||||| | |||| |||||||||||||| ||||| | | |||||||||||||  | |  ||||| || ||||   |||||||||    
T  58260 gtcggctacatggatcaaattacgacataatgttctatcataaaccatatcttggtccaactcattga--tctccaagtttttcctaacagtttctctta 58357  T
Q  632 tagttttcctaggtcttcctct 653  Q
    | ||||| ||||||||||||||    
T  58358 tcgtttttctaggtcttcctct 58379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 602
Target Start/End: Complemental strand, 586 - 509
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcattgacct 602  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||| | ||||||||||||||    
T  586 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttgggtacaactcattgacct 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 538 - 597
Target Start/End: Complemental strand, 39561 - 39502
Alignment:
Q  538 tacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||||||| | |||  |||||||||||||| || ||||||||||||||||||    
T  39561 tacatggattaaattacgccatcatgttctatcataaaccacatttggatccaactcatt 39502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 586
Target Start/End: Original strand, 16464 - 16524
Alignment:
Q  526 agtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttgga 586  Q
    ||||| |||||| |||||||| |||||| | |||| |||||||||||||| ||||||||||    
T  16464 agtggggtcggccacatggatcaaattatgccataatgttctatcataaaccatatttgga 16524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 533 - 597
Target Start/End: Original strand, 25714 - 25778
Alignment:
Q  533 tcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatccaactcatt 597  Q
    |||||||||||||||||||| ||| ||| | || |||||||||| |||||||||| ||| |||||    
T  25714 tcggctacatggattaaattgagtaataatattatatcataaattatatttggattcaattcatt 25778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 588
Target Start/End: Original strand, 28916 - 28979
Alignment:
Q  525 aagtggcgtcggctacatggattaaattaagtcatagtgttctatcataaatcatatttggatc 588  Q
    |||||| ||||||||||||||| |||| | | ||||||||||||||||| | || |||||||||    
T  28916 aagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatc 28979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 8382 times since January 2019
Visitors: 7802