View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390-Insertion-42 (Length: 153)
Name: NF1390-Insertion-42
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1390-Insertion-42 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 132; Significance: 7e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 7e-69
Query Start/End: Original strand, 7 - 153
Target Start/End: Original strand, 8059301 - 8059448
Alignment:
| Q |
7 |
attttagacaccaaataagaagatcca-caaggtcactacttctacaaatatcaatatcactccaaatatcttcatctaccacatcaagattcttatcat |
105 |
Q |
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| T |
8059301 |
attttagacaccaaataagaagatccaacaaggttactacttctacaaatatcaatatcactccaaatatcttcatccaccacatcaagattcttatcat |
8059400 |
T |
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| Q |
106 |
tgaacaaaaccgttgctgcactagaagtgtaaaccacttttttcactg |
153 |
Q |
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| T |
8059401 |
tgaacaaaaccgttgctgcactagaagtgtaaaccacttttttcactg |
8059448 |
T |
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