View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390_high_106 (Length: 312)
Name: NF1390_high_106
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1390_high_106 |
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Alignment Details
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 1052001 - 1052107
Alignment:
| Q |
193 |
aatataacactttgtccatctttcaatcttcttgtaaccacattattagaatatgtaaatatctttattacagattctaatacccatcatgaaaccactc |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
1052001 |
aatataacactttgtccatctttcaatcttcttgtaaccacattattagaatatgtaaatatctttattacagattctaatacccatcatgaaaccactc |
1052100 |
T |
|
| Q |
293 |
ataagta |
299 |
Q |
| |
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||||||| |
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|
| T |
1052101 |
ataagta |
1052107 |
T |
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