View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390_high_135 (Length: 251)
Name: NF1390_high_135
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1390_high_135 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 3624122 - 3624362
Alignment:
| Q |
1 |
aaaaaatgtgctcagaaaacaacaaactagaaaacagactatgaaattgacatgttaacatgaatcatatcaacaaatgtgacattttcattttgttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3624122 |
aaaaaatgtgctcagaaaacaacaaactagaaaacagactatgaaattgacatgttaacatgaatcatatcaacaaatgtgacattttcattttgttcta |
3624221 |
T |
|
| Q |
101 |
gaatttcgaattctagtgtttaattctaaatactggcttaaaggctatagtttggcattattagccatagcttttgattattccataaacaagagttaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3624222 |
gaatttcgaattctagtgtttaattctaaatactggcttaaaggctatagtttggcattattagccatagcttttgattattccataaacaagagttaac |
3624321 |
T |
|
| Q |
201 |
aagcaacctcatgattgagaatacttgccacttagcctatg |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
3624322 |
aagcaacctcatgattgagaatacttgccacttagcctatg |
3624362 |
T |
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