View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1390_high_45 (Length: 461)

Name: NF1390_high_45
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1390_high_45
NF1390_high_45
[»] chr4 (22 HSPs)
chr4 (186-451)||(40806396-40806656)
chr4 (187-451)||(6333560-6333832)
chr4 (188-451)||(30193553-30193819)
chr4 (187-451)||(32136936-32137203)
chr4 (186-444)||(48996330-48996591)
chr4 (186-446)||(40899655-40899918)
chr4 (189-451)||(52344952-52345216)
chr4 (186-451)||(10218927-10219185)
chr4 (223-451)||(23937130-23937361)
chr4 (188-451)||(8176185-8176441)
chr4 (187-451)||(31301643-31301900)
chr4 (224-451)||(43630795-43631007)
chr4 (176-335)||(52345214-52345363)
chr4 (186-275)||(29639994-29640083)
chr4 (186-275)||(50570593-50570682)
chr4 (186-293)||(26477764-26477871)
chr4 (325-418)||(29639732-29639828)
chr4 (186-275)||(42558082-42558171)
chr4 (186-275)||(29643342-29643431)
chr4 (186-275)||(36078683-36078772)
chr4 (187-277)||(5261427-5261517)
chr4 (35-88)||(40806239-40806292)
[»] chr7 (27 HSPs)
chr7 (186-451)||(13852552-13852818)
chr7 (186-451)||(24360866-24361132)
chr7 (186-446)||(43429417-43429680)
chr7 (186-445)||(32823846-32824098)
chr7 (186-441)||(31876217-31876470)
chr7 (253-451)||(22366694-22366895)
chr7 (186-405)||(42910252-42910469)
chr7 (186-444)||(36921127-36921385)
chr7 (186-442)||(10069816-10070065)
chr7 (186-451)||(47903478-47903731)
chr7 (239-445)||(48675362-48675571)
chr7 (223-356)||(27054336-27054469)
chr7 (186-356)||(18672791-18672961)
chr7 (187-445)||(31982243-31982480)
chr7 (210-337)||(5932980-5933101)
chr7 (186-275)||(3211777-3211866)
chr7 (186-275)||(47070027-47070116)
chr7 (187-275)||(47204093-47204181)
chr7 (186-275)||(10672178-10672267)
chr7 (186-256)||(11206013-11206083)
chr7 (186-275)||(12117959-12118048)
chr7 (186-258)||(8768301-8768373)
chr7 (361-453)||(36508932-36509024)
chr7 (380-451)||(18672962-18673033)
chr7 (391-451)||(5932888-5932948)
chr7 (260-320)||(36509024-36509084)
chr7 (409-446)||(27054549-27054586)
[»] chr1 (19 HSPs)
chr1 (186-451)||(33474685-33474953)
chr1 (182-451)||(33910343-33910615)
chr1 (182-451)||(39256202-39256474)
chr1 (186-451)||(24910624-24910892)
chr1 (182-451)||(45692040-45692307)
chr1 (225-451)||(16529101-16529330)
chr1 (176-451)||(32954323-32954596)
chr1 (187-451)||(1160605-1160856)
chr1 (186-451)||(51252001-51252259)
chr1 (264-446)||(44918790-44918975)
chr1 (216-356)||(11899381-11899521)
chr1 (290-446)||(29389281-29389440)
chr1 (182-328)||(6722389-6722529)
chr1 (176-275)||(5154958-5155057)
chr1 (176-275)||(8211639-8211738)
chr1 (176-275)||(20494094-20494193)
chr1 (186-275)||(29707717-29707801)
chr1 (186-240)||(29390137-29390191)
chr1 (409-446)||(11899264-11899301)
[»] chr6 (11 HSPs)
chr6 (216-451)||(13801578-13801816)
chr6 (191-444)||(33550574-33550830)
chr6 (186-451)||(35039509-35039777)
chr6 (186-451)||(25137388-25137655)
chr6 (176-451)||(15859972-15860249)
chr6 (186-445)||(10591099-10591350)
chr6 (188-444)||(10390613-10390858)
chr6 (186-275)||(12270905-12270994)
chr6 (186-275)||(5866653-5866742)
chr6 (182-302)||(10493958-10494078)
chr6 (378-417)||(10494223-10494262)
[»] chr2 (16 HSPs)
chr2 (186-452)||(25297827-25298096)
chr2 (176-451)||(44035553-44035831)
chr2 (187-451)||(11376130-11376392)
chr2 (210-451)||(17916453-17916699)
chr2 (186-451)||(44979346-44979614)
chr2 (187-451)||(19936697-19936959)
chr2 (210-451)||(34910552-34910792)
chr2 (188-380)||(18360115-18360310)
chr2 (325-451)||(20420443-20420572)
chr2 (186-275)||(9811739-9811828)
chr2 (186-275)||(20420777-20420866)
chr2 (186-258)||(16579006-16579078)
chr2 (186-275)||(36412932-36413021)
chr2 (176-276)||(42785091-42785191)
chr2 (376-451)||(18357514-18357589)
chr2 (201-270)||(44085956-44086025)
[»] chr5 (30 HSPs)
chr5 (186-451)||(12680646-12680914)
chr5 (186-445)||(2226454-2226716)
chr5 (186-442)||(12165514-12165773)
chr5 (187-451)||(36103183-36103450)
chr5 (187-451)||(9161226-9161491)
chr5 (186-451)||(32520796-32521059)
chr5 (176-451)||(332842-333122)
chr5 (215-446)||(30265393-30265626)
chr5 (182-443)||(38433937-38434201)
chr5 (186-445)||(10174322-10174566)
chr5 (186-446)||(36176691-36176934)
chr5 (279-442)||(35893238-35893405)
chr5 (267-446)||(42544902-42545086)
chr5 (227-451)||(23780977-23781182)
chr5 (227-451)||(23867930-23868135)
chr5 (186-338)||(36176460-36176612)
chr5 (312-445)||(9988586-9988722)
chr5 (355-451)||(38334707-38334803)
chr5 (183-275)||(701566-701658)
chr5 (260-443)||(17084520-17084706)
chr5 (186-275)||(666903-666992)
chr5 (186-275)||(27885718-27885807)
chr5 (186-275)||(8409335-8409424)
chr5 (186-275)||(11917804-11917893)
chr5 (186-275)||(38334386-38334475)
chr5 (186-275)||(15068825-15068914)
chr5 (186-275)||(30002347-30002436)
chr5 (187-257)||(42545822-42545892)
chr5 (409-451)||(35893205-35893247)
chr5 (203-270)||(691159-691226)
[»] chr3 (17 HSPs)
chr3 (186-446)||(6003964-6004227)
chr3 (189-446)||(35531736-35531991)
chr3 (182-451)||(21586419-21586685)
chr3 (176-451)||(50562152-50562420)
chr3 (247-451)||(33002761-33002968)
chr3 (176-444)||(32880547-32880823)
chr3 (263-446)||(39098187-39098373)
chr3 (215-451)||(43030671-43030895)
chr3 (186-310)||(48032712-48032836)
chr3 (317-451)||(27641870-27642007)
chr3 (186-275)||(10369610-10369699)
chr3 (177-275)||(34794923-34795021)
chr3 (186-275)||(35401805-35401894)
chr3 (186-275)||(51149303-51149392)
chr3 (186-275)||(4669228-4669317)
chr3 (186-275)||(33361312-33361401)
chr3 (187-258)||(27641794-27641865)
[»] chr8 (15 HSPs)
chr8 (188-451)||(36827365-36827631)
chr8 (186-451)||(30392324-30392591)
chr8 (186-444)||(14549478-14549735)
chr8 (187-451)||(10661392-10661658)
chr8 (180-451)||(18169596-18169865)
chr8 (180-451)||(18633162-18633431)
chr8 (215-443)||(33068844-33069075)
chr8 (186-445)||(3682169-3682425)
chr8 (190-445)||(36909923-36910165)
chr8 (186-350)||(44673068-44673236)
chr8 (186-357)||(6200507-6200678)
chr8 (187-258)||(5802528-5802599)
chr8 (215-266)||(3006232-3006283)
chr8 (182-285)||(42496467-42496565)
chr8 (393-443)||(44673023-44673073)
[»] scaffold0059 (2 HSPs)
scaffold0059 (186-451)||(69106-69374)
scaffold0059 (186-356)||(77212-77382)
[»] scaffold0013 (2 HSPs)
scaffold0013 (186-451)||(106278-106547)
scaffold0013 (248-451)||(128885-129092)
[»] scaffold0029 (2 HSPs)
scaffold0029 (186-451)||(40145-40413)
scaffold0029 (186-423)||(47341-47581)
[»] scaffold0308 (1 HSPs)
scaffold0308 (188-275)||(5490-5577)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 40806396 - 40806656
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||||||||||||| |||||||||||||| |     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40806396 ggatgacttttacactgaaccgcacggtttg-----atttgcggtttgcatctcagcaactgaaccaaaccaaaccaaaccgcaagaataatgaatatta 40806490  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatcaggttcgattctaattcctttccatct 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40806491 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcgattttttcattgttgcaacaggttcgattctaattcctttccatct 40806590  T
Q  386 ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40806591 ctttcaattcatttccaatgataaatttgtttcctttactttccaataatttgtttcatgcttatg 40806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 6333832 - 6333560
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagcc-----aaaccgcaagaataatgaat 281  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||||| |||||| |||||||||||| ||     ||||||||||||||||||||    
T  6333832 gatgacttttacactgaaccgcgcgattcggttcgatttgcggcttgcatcttagcaaccgaaccaaaccaaaccaaactaaaccgcaagaataatgaat 6333733  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 378  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||||||||||| ||    
T  6333732 attacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccatcgttgcaccatcaggttcgattctaattcatt 6333633  T
Q  379 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  6333632 tccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 6333560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 188 - 451
Target Start/End: Original strand, 30193553 - 30193819
Alignment:
Q  188 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 287  Q
    ||||||||| ||||||||||  |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  30193553 atgacttttgcaatgaaccgtgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccataccgcaagaataatgaatattact 30193652  T
Q  288 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc 384  Q
    |||||||||| || | ||||||||||||||||||||||| ||||||||||| |||||| ||||||||   |||||||||||||| |||||||||||||||    
T  30193653 taaatatgtattatcccaattacatagctcaagaataatttcttttgattcgatttttccattgttgcaccatcaggttcgattttaattcctttccatc 30193752  T
Q  385 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30193753 tctttcaattcatttacagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 30193819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 32137203 - 32136936
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| ||||||||||  |||||||||| | ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||| |||||||||||    
T  32137203 gatgacttttgcaatgaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccacaagaatgatgaatattac 32137104  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 383  Q
    ||||| |||||||||| ||||||||||||| ||||||||| |||||| |||| |||||||||||||||   |||||||||||||| ||||||||||||||    
T  32137103 ttaaacatgtactagcccaattacatagcttaagaataatttctttttattcgattttttcattgttgcaccatcaggttcgattttaattcctttccat 32137004  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  32137003 ctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaatcatttgtttcatgcttatg 32136936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 186 - 444
Target Start/End: Complemental strand, 48996591 - 48996330
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  48996591 ggatgacttttgcaatgaaccgcgcggttcggtttgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta 48996492  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| ||||||||||  |||||||||||  ||||||||||||||||||||| |||||||||||||||   |||||  |||||||||||||||||||||    
T  48996491 cttaaacatgtactagcctaattacatagcctaagaataatctcttttgattcgattttttcattgttgcaccatcaaattcgattctaattcctttcca 48996392  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 444  Q
     ||||||||||| |||| ||||||| |||||||||| ||| |||  ||||||||||||||||    
T  48996391 cctctttcaatttattttcagtgataaatttgtttcattttcttctcaataatttgtttcat 48996330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 186 - 446
Target Start/End: Original strand, 40899655 - 40899918
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| |  |||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  40899655 ggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta 40899754  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| ||||| |||| |||||||||||| |||| ||||||||||||||||| |||||| ||||||||   |||||  ||| |||||||||||||||||    
T  40899755 cttaaacatgtaatagcccaattacatagcccaaggataatctcttttgattcgatttttccattgttgcaccatcaaattcaattctaattcctttcca 40899854  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  40899855 tctctttaaattcatttccagtgatgaatttatttcctttacttaccaataatttgattcatgc 40899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 189 - 451
Target Start/End: Complemental strand, 52345216 - 52344952
Alignment:
Q  189 tgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactt 288  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  52345216 tgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattactt 52345117  T
Q  289 aaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg--catcaggttcgattctaattcctttccatctc 386  Q
    ||| |||||||||  | ||| ||||||||||||||| || |||||||||  |||||| |||| |||  |||||||||||||||||| |  |||||| |||    
T  52345116 aaacatgtactagtccgattgcatagctcaagaatagtcgcttttgatttgatttttccattattgcacatcaggttcgattctaacttatttccaactc 52345017  T
Q  387 tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52345016 tttcaattcatattcactgatgaatttgtttcctttactttccaataatttgtttcatgcttatg 52344952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 10219185 - 10218927
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||||||||||||| |||||||| |||||||||| | ||||||||||||||||||      | ||||||||||     ||||||||||||||||||||||    
T  10219185 ggatgacttttacactgaaccgcgcggttcggtttggtttgcggtttgcatctcaa-----gtaccaaaccaa-----accgcaagaataatgaatatta 10219096  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||||||  |||||| ||||||||   |||| |||||||||||||||||||||||    
T  10219095 cttaaacatgtactagcccaattacatagctcaagaataatctcatttgattagatttttccattgttgcaccatctggttcgattctaattcctttcca 10218996  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||| ||||    
T  10218995 tctctttcaattcattttcagtgatgaatttgtttcttttacttctcaataatttgtttcatgcttatg 10218927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 451
Target Start/End: Original strand, 23937130 - 23937361
Alignment:
Q  223 tttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa 322  Q
    |||| ||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||| || ||||||  |||||||||| ||||||||    
T  23937130 tttgtggtttgcatctcaacaactgaaccaaaccaaactaaaccgcaagaataataaatattacttaaacatatactagtccaattacataactcaagaa 23937229  T
Q  323 taatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcc 419  Q
    |||||||||| ||||  |||||| ||||||||   ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  23937230 taatctctttagatttgatttttccattgttgcaccatcatgttctattctaattcctttccatctctttcaattcatttctagtgatgaatttgtttca 23937329  T
Q  420 tttactttccaataatttgtttcatgcctatg 451  Q
    |||| || ||||||||||||||||||| ||||    
T  23937330 tttatttcccaataatttgtttcatgcttatg 23937361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 188 - 451
Target Start/End: Original strand, 8176185 - 8176441
Alignment:
Q  188 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 287  Q
    ||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||| ||||||    
T  8176185 atgacttttgcactgaaccgcgtcgttcggttcgatttgcggtttgcatctcagcaac----------caaaccaaaccgcaagaataatgaagattact 8176274  T
Q  288 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc 384  Q
    |||| |||||||||| |||||||||||| ||| |||||||||||||||||| |||||| ||||||||   ||||||||||||| ||||||||||||||||    
T  8176275 taaacatgtactagcccaattacatagcccaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgatcctaattcctttccatc 8176374  T
Q  385 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||| ||||||||| |||| |||||||| |||| ||| ||| ||||||||||||||||||| ||||    
T  8176375 tcttttaattcattttcagttatgaatttttttctttttcttcccaataatttgtttcatgcttatg 8176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 31301900 - 31301643
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || |||||| || ||||| ||||| ||||||||||||||||||||||| ||||||||||          ||||||||||| ||||||||    
T  31301900 gatgactttt-cactgaaccacatggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaacc----------gcaagaataatcaatattac 31301812  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttg-attcaattttttcattgttgca---tcaggttcgattctaattcctttcca 382  Q
    |||||  |||| |||| |||||||||| |||||||||||| | ||||  |||| | |||||||||||||||   |||| |||||||||||||| ||||||    
T  31301811 ttaaacttgtattagcccaattacataactcaagaataattttttttttattcgactttttcattgttgcaccatcagtttcgattctaattcatttcca 31301712  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  31301711 tctccttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatg 31301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 224 - 451
Target Start/End: Complemental strand, 43631007 - 43630795
Alignment:
Q  224 ttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaat 323  Q
    ||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  43631007 ttgcggttgacatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaaaatgtaatagcccaactacatagctcaagaat 43630908  T
Q  324 aatctcttttgattcaattttttcattgttgcatcag---gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcct 420  Q
                      ||||||||||||||| ||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43630907 ------------------tttttcattgttgcaccattaagttcgattctaattcctttccatctctttcaattcatttgcagtgatgaatttgtttcct 43630826  T
Q  421 ttactttccaataatttgtttcatgcctatg 451  Q
    |||||| ||||||||||||||||||| ||||    
T  43630825 ttacttcccaataatttgtttcatgcttatg 43630795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 335
Target Start/End: Complemental strand, 52345363 - 52345214
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || |||||||||||  | |||| |||| ||||||||||| |||| |||||||||||||||||| ||||||||||          |||||||||    
T  52345363 cacttggttcggatgacttttgtactgaatcgcatggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaacc----------gcaagaata 52345274  T
Q  276 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttga 335  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||||| || |||||||    
T  52345273 atgaatattacttaaacatgtactagcccaattgcatagctcaagaatagtcgcttttga 52345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 29640083 - 29639994
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  29640083 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 29639994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 50570593 - 50570682
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  50570593 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 50570682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 293
Target Start/End: Original strand, 26477764 - 26477871
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||||||||||  | | |||||  |||||||||| | ||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||    
T  26477764 ggatgacttttgtactaaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaatccacaagaataatgaatatta 26477863  T
Q  286 cttaaata 293  Q
    ||||||||    
T  26477864 cttaaata 26477871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 29639828 - 29639732
Alignment:
Q  325 atctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttc 418  Q
    ||||| ||| |||| |||||| |||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  29639828 atctcctttaattcgatttttccattgttgcatcatcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttc 29639732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 42558171 - 42558082
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  42558171 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 42558082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 29643342 - 29643431
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| |||| || ||||||||||||||| |||||||||||| ||||||||||| ||||    
T  29643342 ggatgacttttaaactgaaccgcgcggttcggttcggtttgtggcttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 29643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 36078772 - 36078683
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  36078772 ggatgacttttagactgaaccgcgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 36078683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 5261427 - 5261517
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataat 277  Q
    |||||||||| || |||||||| |||||||||||| ||||||||||||||||||| ||  |||||||| ||| |||||| |||||||||||    
T  5261427 gatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagaaatcgaaccaaatcaaaccaaactgcaagaataat 5261517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 40806239 - 40806292
Alignment:
Q  35 atgtgacacggatacttcaccattttaaaaattcgcatgcttaagagttttcat 88  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  40806239 atgtgacacggatactttaccattttaaaagttcacatgcttaagagttttcat 40806292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 13852818 - 13852552
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||   ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13852818 ggatgacttttgcactgaaccgagtggttcggttctgtttgcggtttgcatctcagcaactgaaccaaaccaaaccaaactgcaagaataatgaatatta 13852719  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgtt-gcatcaggttcgattctaattcctttccatc 384  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||    
T  13852718 tttaaatatgtactaactcaattacatagctcaagaataatctcttttgattcgattttttcattgttaccatcaggttcgattataattcctttccatc 13852619  T
Q  385 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13852618 tctttcaattcatttacagtgatgaatttgtttcctttactttccaataatttgtttcatgcttatg 13852552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 24360866 - 24361132
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||  ||||| ||| |||||||||| ||  |||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  24360866 ggatgacttttgcacagaaccacacagttcggttcggtt--cggtttgcgtctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgactatta 24360963  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||   ||||| |||| |||||||||||||||||    
T  24360964 cttaaatatgtactagcccaattacatagctcaagaataatcccttttgattcgattttttcattgttgcaccatcaagttcaattctaattcctttcca 24361063  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24361064 tttctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 24361132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 186 - 446
Target Start/End: Complemental strand, 43429680 - 43429417
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || | ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  43429680 ggatgacttttgcactaaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgactatta 43429581  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    ||||||  |||||| |  ||||||||||||||||||| ||||||||||||||| |||||| ||||||||   |||||||||| |||||||||||||||||    
T  43429580 cttaaacgtgtactcgtccaattacatagctcaagaaaaatctcttttgattcgatttttccattgttgcaccatcaggttcaattctaattcctttcca 43429481  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  43429480 tctctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc 43429417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 32824098 - 32823846
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||          ||| |||||||||| |||||||||||||||    
T  32824098 ggatggcttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaac----------caaaccaaaccgcatgaataatgaatatta 32824009  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||   ||||||||||||||||||||||||||||    
T  32824008 cttaaacatgtactagcccaattacatagctcaagaataatctcctttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca 32823909  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
    ||| ||||||||||||  || ||||||||||||||| ||||||||||||||||||| ||||||    
T  32823908 tctatttcaattcattctcactgatgaatttgtttcatttactttccaataatttgcttcatg 32823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 186 - 441
Target Start/End: Original strand, 31876217 - 31876470
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||  ||||||| || | |||||||||||||||||||||||     |||||||| ||||||||||| ||||||||||||||    
T  31876217 ggatgacttttgcaatgaaccgtgcggttcgatttggtttgcggtttgcatctcagcaac-----caaaccaaaccaaaccgcaaaaataatgaatatta 31876311  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||||   |||||| |||||||||||||| ||||||    
T  31876312 cttaaacatgtactagcccagttacatagctcaagaataatctcttttaattcgatttttccattgttgcaccatcagattcgattctaattcttttcca 31876411  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgttt 441  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  31876412 tctcttttaattcatttccagtgatgactttgtttcctttacttccaaataatttgttt 31876470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 253 - 451
Target Start/End: Complemental strand, 22366895 - 22366694
Alignment:
Q  253 aaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgt 352  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||  ||||  ||||| ||||||    
T  22366895 aaccaaaccaaaccgcaagaataatgaatattactcaaacatgtactagcccaattacatagctcaagaataatctctttcaattcggtttttccattgt 22366796  T
Q  353 tgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgccta 449  Q
    ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  22366795 tgcaccatcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgctta 22366696  T
Q  450 tg 451  Q
    ||    
T  22366695 tg 22366694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 186 - 405
Target Start/End: Original strand, 42910252 - 42910469
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  42910252 ggatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta 42910346  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||   |||||||| |||||||||||||||||||    
T  42910347 cttaaacatgtactagcccaattacatagctcaagaataatctcttttgatttgatttttccattgttgcaccatcaggtccgattctaattcctttcca 42910446  T
Q  383 tctctttcaattcatttccagtg 405  Q
    |||||||||||||||||||||||    
T  42910447 tctctttcaattcatttccagtg 42910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 186 - 444
Target Start/End: Original strand, 36921127 - 36921385
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||| |||||| || |||||| | |||||||||| | ||||| ||||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  36921127 ggattacttttgcattgaaccacgcggttcggtttggtttgcagtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta 36921221  T
Q  286 cttaaatatgtactagctc--aattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttc 380  Q
    |||||| |||||||| | |  ||||||||||||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||||| ||||    
T  36921222 cttaaacatgtactaacccccaattacatagctcaagaataatcgcttttgattcgattttttcattgttgcaccatcaggttcgattctaattcttttc 36921321  T
Q  381 catctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 444  Q
    ||||||||||||||||||| || |||| |||||||||| ||||||| |||||||||||||||||    
T  36921322 catctctttcaattcattttcaatgataaatttgtttcttttacttcccaataatttgtttcat 36921385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 442
Target Start/End: Complemental strand, 10070065 - 10069816
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||||| |||| ||||| |||||| ||||||||||||||||          ||| |||||||||||||||||| |||||||    
T  10070065 ggatgacttttgcactgaaccgcacagttcagttcggtttgcgatttgcatctcagcaac----------caaaccaaaccgcaagaataatcaatatta 10069976  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 382  Q
    ||||||  |||||  || |||||||||||| |||||||||||| ||||||||  |||||| ||||||||||   ||||||| ||||||||||||||||||    
T  10069975 cttaaacttgtaccggcccaattacatagcccaagaataatcttttttgatttgatttttccattgttgcaccatcaggtttgattctaattcctttcca 10069876  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc 442  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  10069875 tctccttcaattcatttccaatgatgaatttgtttccttttcttcccaataatttgtttc 10069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 47903731 - 47903478
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| | ||||| |||| ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||       
T  47903731 ggatgacttttgcactgaaccgcgcagttcgtttcggtttgcggtttgcatctcagcaaccgaaccaaaacaacccaaaccacaagaataatgaata--- 47903635  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 382  Q
                |||||  |||||||||||||||||||| | | ||| ||||| |||||||||||||||||   |||||||||||| |||||| ||||||    
T  47903634 ------------ctagccaaattacatagctcaagaatactatttttcgattcgattttttcattgttgcaccatcaggttcgattataattcatttcca 47903547  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    | ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  47903546 tatctttcaattcatttccagtgatgaatttgtttcctttatttcccaataatttgtttcatgcttatg 47903478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 239 - 445
Target Start/End: Complemental strand, 48675571 - 48675362
Alignment:
Q  239 cagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattc 338  Q
    ||||||||||||||||| ||  ||||||| ||||||||| ||||||||||||| ||||| ||||  |||||||||||| || ||||| |||||||| ||     
T  48675571 cagcaactgaaccaaacaaaatcaaaccgtaagaataataaatattacttaaacatgtattagcctaattacatagctaaaaaataacctcttttggttt 48675472  T
Q  339 aattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataat 435  Q
     ||| || ||||||||||   ||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||    
T  48675471 gattattccattgttgcaccatcaggtttgattctaattcatttccatctctttgaattcattttcagtgatgaatttgtttcctttacttcctaataat 48675372  T
Q  436 ttgtttcatg 445  Q
    ||||||||||    
T  48675371 ttgtttcatg 48675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 223 - 356
Target Start/End: Original strand, 27054336 - 27054469
Alignment:
Q  223 tttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa 322  Q
    |||||||||||||| |||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27054336 tttgcggtttgcatatcagcaatcgaaccaaaccaaaccaaaccacaagaataatgaatattacttaaatatgtactagcccaattacataactcaagaa 27054435  T
Q  323 taatctcttttgattcaattttttcattgttgca 356  Q
    |||||||||||||||| |||||||||||||||||    
T  27054436 taatctcttttgattcgattttttcattgttgca 27054469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 186 - 356
Target Start/End: Original strand, 18672791 - 18672961
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||||| |||| || || ||||| | |||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||    
T  18672791 ggatgatttttgcattggaccgcgcagttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaataataatcaatatta 18672890  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca 356  Q
    ||||||  ||||||||| |||||||||||| || ||||||||||||||||||  ||||||  |||||||||    
T  18672891 cttaaacttgtactagcccaattacatagcacaggaataatctcttttgattagatttttctattgttgca 18672961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 187 - 445
Target Start/End: Original strand, 31982243 - 31982480
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || ||||| || ||||| |||| |||||||||||||||||| ||||||          ||| ||||||||||| |||||| ||||||||    
T  31982243 gatgacttttgcactgaactgcgcggtttggtttgatttgcggtttgcatcttagcaac----------caaaccaaaccgcaaaaataatcaatattac 31982332  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 383  Q
    |||||| ||||| ||| |||||||||||| |||||||||||||||||||||  |||||| ||||||||   |||||  |||||||||||||||||         
T  31982333 ttaaatttgtaccagcccaattacatagcccaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattctaattcctt----- 31982427  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
             ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  31982428 ---------ttcattttcagtgatgaatttgtttccttttcttcccaataatttgtttcatg 31982480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 5933101 - 5932980
Alignment:
Q  210 cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta 309  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||| || ||||||||||      ||||||| |||||||||| ||||||    
T  5933101 cggttcggttcggtttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaatcgtaagaataatg------acttaaacatgtactagcccaatta 5933008  T
Q  310 catagctcaagaataatctcttttgatt 337  Q
    ||||||||||||||||||||||| ||||    
T  5933007 catagctcaagaataatctctttcgatt 5932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 3211777 - 3211866
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  3211777 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 3211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 47070116 - 47070027
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  47070116 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 47070027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 47204093 - 47204181
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    ||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  47204093 gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 47204181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 10672267 - 10672178
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  10672267 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 10672178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 11206013 - 11206083
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaacc 256  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  11206013 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaacc 11206083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 12118048 - 12117959
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||| | ||||||||| ||||    
T  12118048 ggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaaccgcaaaaata 12117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 8768301 - 8768373
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 258  Q
    |||||||||||| | |||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  8768301 ggatgacttttagactgaaccgcgcggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaa 8768373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 36509024 - 36508932
Alignment:
Q  361 gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatgct 453  Q
    ||||||||||| || ||||||||||| ||||||| |||| | |||||||||||||||||||| ||  |||||||||||||||| || ||||||    
T  36509024 gttcgattctatttgctttccatctccttcaattaattttcggtgatgaatttgtttccttttctccccaataatttgtttcaggcttatgct 36508932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 18672962 - 18673033
Alignment:
Q  380 ccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||| ||||    
T  18672962 ccatctccttcaattcatttccattgatgaatttgtttccttttcttccaaataatttgtttcatgcttatg 18673033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 5932948 - 5932888
Alignment:
Q  391 aattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||| ||| ||||    
T  5932948 aattcattttcagtgatgaatttgtttcctttactttctaataatttatttcttgcttatg 5932888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 36509084 - 36509024
Alignment:
Q  260 ccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaag 320  Q
    |||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| ||||    
T  36509084 ccaaaccgcaagaataatcaatattacttaaatttgtacgagcccaattacatagcccaag 36509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 446
Target Start/End: Original strand, 27054549 - 27054586
Alignment:
Q  409 aatttgtttcctttactttccaataatttgtttcatgc 446  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27054549 aatttgtttcctttacttcccaataatttgtttcatgc 27054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 33474953 - 33474685
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| |||||||||||| |||| | ||||||||||| |||| |||||||||||| |||||| |||||||||| ||||||||    
T  33474953 ggatgacttttgcactgaaccgcgcggttcggttcggtttgtgatttgcatctcatcaaccgaaccaaaccaaaccaaactgcaagaataacgaatatta 33474854  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||   ||||||||||||||||||||||||||||    
T  33474853 cttaaatatgtactagcccaattacatagctcaagaataatctcttttgatttgattttttcattgttgcgtcatcaggttcgattctaattcctttcca 33474754  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  33474753 tctctttcaattcatttccagtgatgaatttgtttcctttacatcccaataatttgtttcatgcttatg 33474685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 182 - 451
Target Start/End: Original strand, 33910343 - 33910615
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||||||||||||| || |||||||| |||||||||| | ||||||||||||||||||| ||   ||||||||||| ||||||||||||||||||||||    
T  33910343 atttggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagtaatcaaaccaaaccaaaccaaaccgcaagaataatgaat 33910442  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 378  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||| || |||||   ||||||||||||||||||||| ||    
T  33910443 attacttaaatatgtactagcccaattacataacttaagaataatctcttttgattcgatttttccaatgttgcaccatcaggttcgattctaattcttt 33910542  T
Q  379 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33910543 tccatctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 33910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 182 - 451
Target Start/End: Original strand, 39256202 - 39256474
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||||||||||||| || ||||| || ||||| |||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  39256202 atttggatgacttttgcactgaactgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaat 39256301  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 378  Q
    |||||||||| ||||||||||  |||||||||||||| ||||||||| ||| ||||| |||||| ||||||||   ||||||||||||||||||||||||    
T  39256302 attacttaaacatgtactagccaaattacatagctcacgaataatctttttcgattcgatttttccattgttgcaccatcaggttcgattctaattcctt 39256401  T
Q  379 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||    
T  39256402 tccatctctttcaattcatttccaatgatgaatttgtttcctttatttcccaataatttgtttcatgcttatg 39256474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 24910624 - 24910892
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||  | |||||||||  |||| |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  24910624 ggatgacttttgcattgaaccgtgcagttcggttcagtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccggaagaataatgaatatta 24910723  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  |||||||   |||||||||||||||||||| |||||||    
T  24910724 cttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttcaattgttgcaccatcaggttcgattctaatttctttcca 24910823  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24910824 tctctctcaattcatttcgagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 24910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 182 - 451
Target Start/End: Complemental strand, 45692307 - 45692040
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||     |||||||||||||| |||    
T  45692307 atttggatgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaacaa-----accgcaagaataataaat 45692213  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 378  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  45692212 attacttaaatatgtactagtccaattacataactcaagaataatctcttttgattcaattttttcattgttgcaccattaggttcgattctaattcctt 45692113  T
Q  379 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||||||| ||| ||||||||| | |||||||||| | ||||||||| ||||||| ||||    
T  45692112 tccatctctttcaattcatttacagagatgaatttatatcctttacttcctaataatttgcttcatgcttatg 45692040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 16529101 - 16529330
Alignment:
Q  225 tgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaata 324  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| ||||||||    
T  16529101 tgcggtttgcatctcagcaaccaaaccaaaccaaaccaaaccgcaagaatagtgaatattacttaaacatgtaatagcccaattacatagcccaagaata 16529200  T
Q  325 atctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctt 421  Q
    |||||||||||||| | |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  16529201 atctcttttgattcgaatttttcattgttgcaccatcaggttcgattctaattcctttccatctctttcaattcatttccagggatcaatttgtttcctt 16529300  T
Q  422 tactttccaataatttgtttcatgcctatg 451  Q
    | ||| | ||||||||||||||||| ||||    
T  16529301 ttcttccaaataatttgtttcatgcttatg 16529330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 176 - 451
Target Start/End: Complemental strand, 32954596 - 32954323
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || ||||||||||| || | ||||||||||||| ||||| || |||||||||||||||||||| |||||||||||| ||| |     ||||||    
T  32954596 cacttggttcggatgacttttgcactaaaccgcacggttccgttcggttcgcggtttgcatctcagcaaccgaaccaaaccaaaccata-----agaata 32954502  T
Q  276 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaa 372  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||   |||||||| |||||||    
T  32954501 atgaatattacttaaacatgtacaagcccaattacatagctcaagaataatttctttcgattcgatttttccattgttgcaccatcaggttcaattctaa 32954402  T
Q  373 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    || ||||||| |||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||| ||||    
T  32954401 ttactttccaactctttcaattcattttcagtgatgaatttgtttcctttacttcataataatttgtttcatgcttatg 32954323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 187 - 451
Target Start/End: Original strand, 1160605 - 1160856
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||        
T  1160605 gatgacttttgcactgaaccgcacgattcggttcgatttgcggtt-gcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaata---- 1160699  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat 383  Q
               |||||  |||||||||||||||||||||||| ||| |||||||||||| ||||||||||   |||||| ||||||||||||||||||||    
T  1160700 -----------ctagccaaattacatagctcaagaataatctttttcgattcaatttttccattgttgcaacatcaggtacgattctaattcctttccat 1160788  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  1160789 ctctttcaattcatttccagtgatgattttgtttcctttatttcccaataatttgtttcatgcttatg 1160856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 51252001 - 51252259
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||          ||| |||| |||||||||||||||||||||    
T  51252001 ggatgacttttgcaatgaaccgcgcagttcggtttggtttgcggtttgcatctcagcaac----------caaaccaacccgcaagaataatgaatatta 51252090  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 382  Q
    |||||| ||||||||||  |||||||||||  || |||||||||||||||||| |||||| ||||||||||   |||  |||||||||||||||||||||    
T  51252091 cttaaacatgtactagcctaattacatagccaaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca 51252190  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||| || |||||||||| ||| ||| ||||||||||||||||||| ||||    
T  51252191 tctctttcaattcatttccagttataaatttgtttcattttcttcccaataatttgtttcatgcttatg 51252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 264 - 446
Target Start/End: Complemental strand, 44918975 - 44918790
Alignment:
Q  264 accgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcag 360  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||  |||||| |||||||||   ||||     
T  44918975 accgcaagaataatgaatattacttaaacatgtactagtccaattacatagctcaagaataatcttttttgatttgatttttccattgttgctccatcaa 44918876  T
Q  361 gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44918875 gttcgattctaattcttttccatctctttcgattcatttccagtgattaatttgtttcctttacttcccaataatttgtttcatgc 44918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 11899521 - 11899381
Alignment:
Q  216 ggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc 315  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11899521 ggtttgatttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc 11899422  T
Q  316 tcaagaataatctcttttgattcaattttttcattgttgca 356  Q
    ||||||||||||| ||||||||  |||||| ||||||||||    
T  11899421 tcaagaataatcttttttgatttgatttttccattgttgca 11899381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 290 - 446
Target Start/End: Complemental strand, 29389440 - 29389281
Alignment:
Q  290 aatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctc 386  Q
    |||||||| || || ||||||| | ||||||||||||||||||| |||| |||||| ||||||||||   ||||||||||||||||||||| ||||||||    
T  29389440 aatatgtattatctgaattacacaactcaagaataatctcttttaattcgatttttccattgttgcaccatcaggttcgattctaattcctctccatctc 29389341  T
Q  387 tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    |||||| |||||||||| |||||| ||||||| ||||||| |||||||||||||||||||    
T  29389340 tttcaactcatttccagggatgaacttgtttcttttacttcccaataatttgtttcatgc 29389281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 182 - 328
Target Start/End: Original strand, 6722389 - 6722529
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||||||||||||| || |||||    ||||||| |||||||||||||||||||||||||||| ||||||||     |||||||||||| |||||||||    
T  6722389 atttggatgacttttgcattgaactttgcggttcgattcgatttgcggtttgcatctcagcaaccgaaccaaa-----ccaaaccgcaag-ataatgaat 6722482  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatct 328  Q
    |||||||||| |||||||  | |||||||||||||||||||||||||    
T  6722483 attacttaaacatgtactgacccaattacatagctcaagaataatct 6722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 5154958 - 5155057
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5154958 cacttggttcggatgacttttagactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5155057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 8211738 - 8211639
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  8211738 cacttggttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 8211639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 20494193 - 20494094
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || |||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  20494193 cacttggttcggatgacttttagactgaaccgcgcggttcggttcgatttgctgtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 20494094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 29707717 - 29707801
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||||||||||||||     ||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  29707717 ggatgacttttagactgaaccgcacggttcggtt-----tgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 29707801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 29390191 - 29390137
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctca 240  Q
    ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||    
T  29390191 ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctca 29390137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 446
Target Start/End: Complemental strand, 11899301 - 11899264
Alignment:
Q  409 aatttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11899301 aatttgtttcctttactttccaataatttgtttcatgc 11899264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 216 - 451
Target Start/End: Original strand, 13801578 - 13801816
Alignment:
Q  216 ggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc 315  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13801578 ggttcggtttgcggtttgcatctcatcaactgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagcccaattacatagc 13801677  T
Q  316 tcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatt 412  Q
    |||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  13801678 tcaagaataatctcttttgattcaatttttccattgttgcaccatcaggttcgattctaattccttttcatctctttcaattcatttccactgatgaatt 13801777  T
Q  413 tgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||| |||||||||| |||||||| ||||    
T  13801778 tgtttcctttacttcccaataatttatttcatgcttatg 13801816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 191 - 444
Target Start/End: Complemental strand, 33550830 - 33550574
Alignment:
Q  191 acttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaa 290  Q
    |||||| || |||||||| ||||| |||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  33550830 acttttgcactgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaagaataatgaatattacttaa 33550731  T
Q  291 atatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctct 387  Q
    | |||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||   |||||||||||||||||||||||||| ||||||    
T  33550730 acatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcgatctct 33550631  T
Q  388 ttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 444  Q
    || |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  33550630 tttaattcatttctagtgatgaatttgtttccttttcttcccaataatttgtttcat 33550574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 35039509 - 35039777
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| |  |||||||| ||||| |||||| |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||| |||    
T  35039509 ggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaaccgcaagaataatgaatgtta 35039608  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||   |||||  ||| |||||||||||||||||    
T  35039609 cttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaaattcaattctaattcctttcca 35039708  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  35039709 tctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgcttatg 35039777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 25137655 - 25137388
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| ||||| |||| | || ||||| ||||||||| |||| |||||||||  | ||||||| ||| ||||||||||||||    
T  25137655 ggatgacttttgcactgaaccgcgcggtttggtttggtt-gcggtatgcatctcatcaaccgaaccaaactgaaccaaaccacaataataatgaatatta 25137557  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||| | |||||||||||| |||||||||||||||||||||| ||||||||| | |||||   |||||||| |||||||||| |||||     
T  25137556 cttaaacatgtactatcccaattacatagcccaagaataatctcttttgattcgattttttcaatattgcaccatcaggttcaattctaattcatttcct 25137457  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  25137456 tctctttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatg 25137388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 176 - 451
Target Start/End: Complemental strand, 15860249 - 15859972
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || |||||||||||||| |||||||  ||||||| || | ||||| ||||||| |||| |||| |||||||||||| |||||| |||||||||    
T  15860249 cacttggttcggatgacttttacactgaaccgtgcggttcgatttggtttgcagtttgcacctcaccaaccgaaccaaaccaaaccaaactgcaagaata 15860150  T
Q  276 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa 372  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| |  |||| ||||||||   |||||| | |||||||||    
T  15860149 atgaatattaattaaacatgtactagcccaattacatagctcaagaataatctcttttgatt-agattttccattgttgcaccatcagttccgattctaa 15860051  T
Q  373 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||| |||| ||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  15860050 ttcttttctatctctttcaattcatttttagtgatgaatttgtttcctttacttctcaataatttgtttcatgcttatg 15859972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 10591350 - 10591099
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| ||||||| |||| |||||||||||| ||||| |||| |||||||||||| |  |||||||||||||||||||||||    
T  10591350 ggatgacttttgcactgaaccgcgcggttcgattcggtttgcggtttgcgtctcaacaacagaaccaaaccaaactgaaccgcaagaataatgaatatta 10591251  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| ||||| |||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||   ||||||||||||||||||||| ||||||    
T  10591250 cttaaacatgtaatagcccaattacatagctcaagaataatgtctttcgattcgattttttcattgttgtaccatcaggttcgattctaattcatttcca 10591151  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
    |||||||           ||||||| |||||||||| ||||||| ||||||||||||||||||    
T  10591150 tctcttt-----------cagtgattaatttgtttcttttacttcccaataatttgtttcatg 10591099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 188 - 444
Target Start/End: Original strand, 10390613 - 10390858
Alignment:
Q  188 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 287  Q
    ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||      
T  10390613 atgacttttgcactgaaccgcgcggttcggttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatagta-- 10390710  T
Q  288 taaatatgtactagctcaattacatagctcaa-gaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat 383  Q
                 ||  |||||| |||||||| ||||||||| ||| |||||||||||| ||||||||||   |||| ||||||| ||||||||||||||    
T  10390711 -------------gccaaattacgtagctcaaagaataatctttttcgattcaatttttccattgttgcaccatcagattcgattttaattcctttccat 10390797  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 444  Q
    |||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  10390798 ctctttcaattcatttccagtgatgaatttgtttcctttatttctcaataatttgtttcat 10390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 12270994 - 12270905
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  12270994 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 12270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 5866653 - 5866742
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    ||||| |||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5866653 ggatgtcttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5866742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 10493958 - 10494078
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||| ||||||||| || |||||||    ||||| |||| ||||| |||||||||||||||||| ||||||||||| |||||| |||||||||||   |    
T  10493958 atttgaatgacttttgcactgaaccgtgtagttcgattcggtttgcagtttgcatctcagcaactaaaccaaaccaaaccaaactgcaagaataatcgtt 10494057  T
Q  282 attacttaaatatgtactagc 302  Q
     |||||||||  |||||||||    
T  10494058 gttacttaaacttgtactagc 10494078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 10494223 - 10494262
Alignment:
Q  378 ttccatctctttcaattcatttccagtgatgaatttgttt 417  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  10494223 ttccatctccttcaattcattttcagtgatgaatttgttt 10494262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 186 - 452
Target Start/End: Original strand, 25297827 - 25298096
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| |  ||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  25297827 ggatgacttttgctttgaaccgcacggttcggtttggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta 25297926  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||   |||||||||||||||||||| |||||||    
T  25297927 cttaaacatgtactagcccaattacatagctcaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcgattctaatttctttcca 25298026  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatgc 452  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  25298027 tctctttcaatttatttccagtgatgaatttgtttcatttacttcccaataatttgtttcatgcttatgc 25298096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 176 - 451
Target Start/End: Complemental strand, 44035831 - 44035553
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || ||||||||||| || |||||||| |||||||||| | ||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  44035831 cacttggttcggatgacttttgcactgaaccgcgcggttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 44035732  T
Q  276 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcaggttcgattctaa 372  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||   |||| ||||||||||||    
T  44035731 atgaatattacttaaacatgtactagctcagttacataactcaagaataatctcttttgattcgattttttcattgttgcacgatcaagttcgattctaa 44035632  T
Q  373 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||| ||||    
T  44035631 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttccaaatattttgtttcttgcttatg 44035553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 11376392 - 11376130
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||     |||||||||||| ||||||||||    
T  11376392 gatgacttttgcactgaaccgcgcggttcggttcggtttgcagtttgcatctcagcaactgaaccaaaccaa-----accgcaagaatactgaatattac 11376298  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat 383  Q
    ||||| |||||||||||||||| |||||| ||||||||||| |||||||||| |||||| ||||||||||   |||||||||||||||||||||||||||    
T  11376297 ttaaacatgtactagctcaattgcatagcccaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttccat 11376198  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11376197 ctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 11376130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 210 - 451
Target Start/End: Original strand, 17916453 - 17916699
Alignment:
Q  210 cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta 309  Q
    |||||||||| | |||| |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  17916453 cggttcggtttggtttgtggtttgcatctcagcaaccgagccaaaccaaaccaaaccgcaagaataatgaatattacttaaacatgtactagcccaatta 17916552  T
Q  310 catagctcaagaataatctcttttgattcaattttttcattgttgcatc-----aggttcgattctaattcctttccatctctttcaattcatttccagt 404  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||| |     |||||||||| |||||||||||||||||||||||||||||||||||    
T  17916553 catagctcaagaataatctcttttgattcattttttccattattgcaccatcagaggttcgattataattcctttccatctctttcaattcatttccagt 17916652  T
Q  405 gatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||| |||||||| | ||||||||||||||||| ||||    
T  17916653 gatgaatttgttttctttacttccaaataatttgtttcatgcttatg 17916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 44979346 - 44979614
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||||| |||| || |||||||| ||||| | || | |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||    
T  44979346 ggatgaattttgcactgaaccgcgcggtttgatttggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta 44979445  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||| || ||||||||||||||||||| |||||| ||||||||   ||| |||||| |||||||||||||||||    
T  44979446 cttaaacatgtactagcccaattacatagcccaggaataatctcttttgattcgatttttccattgttgcaccatgaggttcaattctaattcctttcca 44979545  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  44979546 tctcttttaattcatttccagtgatgaatttgtttccttttctttccaataatttgcttcatgcttatg 44979614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 187 - 451
Target Start/End: Original strand, 19936697 - 19936959
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||| ||||| || ||||| || |||||||||||| ||||| ||||| |||||||||||     |||||||| |||||||||||||||||||||||||||    
T  19936697 gatgtctttttcactgaactgcgcggttcggttcggtttgcagtttgtatctcagcaac-----caaaccaaaccaaaccgcaagaataatgaatattac 19936791  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 383  Q
    ||| | |||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||   ||||| |||||||||||||| ||||||||    
T  19936792 ttatacatgtactagctcaaatacatagctcaagaataatatattttgattcgattttttcattgttgcaccatcatgttcgattctaatttctttccat 19936891  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||    
T  19936892 ctcattcaattcatttccagtgctgaatttgtttcctttacttcccaataatttgtttcatgcttatg 19936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 210 - 451
Target Start/End: Complemental strand, 34910792 - 34910552
Alignment:
Q  210 cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta 309  Q
    |||||||||| | ||| ||||||| |||| |||||| ||| ||||||||     |||||||||||||||||||||||||||| |||||||| | ||||||    
T  34910792 cggttcggtttggtttacggtttgaatctgagcaaccgaaacaaaccaa-----accgcaagaataatgaatattacttaaacatgtactaacccaatta 34910698  T
Q  310 catagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtga 406  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||   ||||| ||||||||||||||| ||| ||| ||| ||||||||||| | ||||    
T  34910697 catagcccaagaataatatcttttgattcgatttttccattgttgcaccatcaagttcgattctaattcgttttcatttctctcaattcattttctgtga 34910598  T
Q  407 tgaatttgtttcctttacttt-ccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||    
T  34910597 tgaatttgtttccttttctttcccaataatttgtttcatgcttatg 34910552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 188 - 380
Target Start/End: Complemental strand, 18360310 - 18360115
Alignment:
Q  188 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 287  Q
    ||||||||| || |||||| | |||||||||| | ||| | ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  18360310 atgacttttgcattgaaccacgcggttcggtttggtttacagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatcaatattact 18360211  T
Q  288 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttc 380  Q
    ||||  ||||||||| |||||||||||| | | |||||||||||||||||| |||||| ||||||||   ||||| |||||||||||||| |||||    
T  18360210 taaacttgtactagcccaattacatagcccgaaaataatctcttttgattcgatttttccattgttgcaccatcatgttcgattctaatttctttc 18360115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 325 - 451
Target Start/End: Complemental strand, 20420572 - 20420443
Alignment:
Q  325 atctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctt 421  Q
    ||||| ||| |||| |||||| |||||||||||||   |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||    
T  20420572 atctcctttaattcgatttttccattgttgcatcatcaggtttgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcatt 20420473  T
Q  422 tactttccaataatttgtttcatgcctatg 451  Q
    | ||| ||||||||||| ||||||| ||||    
T  20420472 ttcttcccaataatttgattcatgcttatg 20420443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 9811828 - 9811739
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  9811828 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 9811739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 20420866 - 20420777
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  20420866 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata 20420777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16579078 - 16579006
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 258  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16579078 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaactgaaccaaaccaa 16579006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 36412932 - 36413021
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36412932 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata 36413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 42785091 - 42785191
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || ||||||||||| || |||||| | |||||||||| | ||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  42785091 cacttggttcggatgacttttgcattgaaccacgcggttcggtttggtttgcggtttgcatctcagaaaccgaaccaaaccaaaccaaaccgtaagaata 42785190  T
Q  276 a 276  Q
    |    
T  42785191 a 42785191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 18357589 - 18357514
Alignment:
Q  376 ctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  18357589 ctttccatcttcttcaattcatttccagtgatgaatttgtttcattttcttcccaataatttgtttcatgcttatg 18357514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 44086025 - 44085956
Alignment:
Q  201 tgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaa 270  Q
    ||||||||| |||| |||| | |||| ||||| ||| ||| |||| |||||||||||| |||||||||||    
T  44086025 tgaaccgcatggtttggtttggtttgtggttttcatttcaccaaccgaaccaaaccaaaccaaaccgcaa 44085956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 8e-99; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 12680646 - 12680914
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| ||||| |||| | ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  12680646 ggatgacttttgcaatgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaatgatgaatatta 12680745  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||| || || |||||||||||||||||| |||||| ||||||||   ||||||||||||||||||||||||||||    
T  12680746 cttaaacatgtactagcccaattacataacttaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca 12680845  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  12680846 tctctttcaattcatttcaagtgatgaatttgtttcctttacttttcaataatttgtttcatgcttatg 12680914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 186 - 445
Target Start/End: Original strand, 2226454 - 2226716
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || | |||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  2226454 ggatgacttttgcacttaaccgcgcggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgccagaataatgaatatta 2226553  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| ||||| |||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||   ||||||||||||||||||||||||||||    
T  2226554 cttaaacatgtattagcccaattacatagctcatgaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca 2226653  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  2226654 tctctttcaattcatttcctgtgatgaatatgtttcctttacttcccaataatttgtttcatg 2226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 186 - 442
Target Start/End: Original strand, 12165514 - 12165773
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  12165514 ggatgacttttgcactgaaccgcatggttcggttcggtttgcagtttgcatctcagcaactgaaccaaacgaaaccaaaccgcaagaataatgaatatta 12165613  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| ||||| || ||| ||||||||   |||||||||| ||| |||||||||| ||    
T  12165614 cttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatctttccattgttgcaccatcaggttcaattttaattccttttca 12165713  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc 442  Q
    |||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  12165714 tctctttcgatttatttccagtgatgaatttgtttcctttacttgtcaataatttgtttc 12165773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 187 - 451
Target Start/End: Original strand, 36103183 - 36103450
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || |||||||| ||||||| || | ||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  36103183 gatgacttttgcactgaaccgcgcggttcgttttggtttgtagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattac 36103282  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 383  Q
    || || |||||||||| ||| ||||||||||||||||||||  ||||||||| |||||| ||||||||   ||||| |||||||||||||||||||||||    
T  36103283 ttgaacatgtactagcccaactacatagctcaagaataatcgtttttgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccat 36103382  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  36103383 ctctttcaattcatttacagtgatgaatttgtttcatttactttccaataatttgtttgatgcttatg 36103450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 9161491 - 9161226
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  9161491 gatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgaatctcagcaaccgaaccaaaccaaacccaaccgcaagaataatgaatattac 9161392  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 383  Q
    ||||||||| |||||| |||  ||||||||||  |||||||||||||||||| |||||| ||||||||   ||||| |||| ||||||||||||||||||    
T  9161391 ttaaatatgcactagcccaa--acatagctcagaaataatctcttttgattcgatttttccattgttgcaccatcaagttcaattctaattcctttccat 9161294  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  9161293 ctctttgaattcatttccagtgatgaatttatttcctttacttcccaataatttgtttcatgcttatg 9161226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 32520796 - 32521059
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| |||||||||| | |||||| | |||||||||||||| ||||||||||||     ||||||||||| ||||||||||    
T  32520796 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcgatctgcatctcagcaaccgaaccaaaccaa-----accgcaagaatgatgaatatta 32520890  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| ||||||||||  | ||||||||||||||||||||| |||||||||||||||   ||||||||||||||||| ||| ||||||    
T  32520891 cttaaagatgtactagcccaattacataatttaagaataatctcttttgattcgattttttcattgttgcaccatcaggttcgattctagttcatttcca 32520990  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  32520991 tctctttcaattcatttcaagtgatgaatttgtttcttttacttcccaataatttgtttcatgcttatg 32521059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 176 - 451
Target Start/End: Original strand, 332842 - 333122
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || ||| ||||||| || |||||||| | |||||||| | ||||||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  332842 cacttggttcggacgacttttgcactgaaccgcgcagttcggtttggtttgcggtttgcatctcagcatccgaaccaaaccaaactaaaccgcaagaata 332941  T
Q  276 atgaatattacttaaatatgtactagctcaattac--atagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattct 370  Q
    |||||||||||||||| ||||||| || |||||||  |||||||||||||||||| ||||||||| |||||| |||  |||   ||||| ||||||||||    
T  332942 atgaatattacttaaacatgtactggcccaattacatatagctcaagaataatctattttgattcgatttttccataattgcaccatcaagttcgattct 333041  T
Q  371 aattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| ||||    
T  333042 aattcctttctatctctttcaattcatttcccgtgatgaatttatttcttttacttcccaataatttgtttcatgcttatg 333122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 215 - 446
Target Start/End: Original strand, 30265393 - 30265626
Alignment:
Q  215 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatag 314  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||  |||| ||||| |||||||||||    
T  30265393 cggttcggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaatcgcaagaataatgaatattacttaatcatgtgctagcccaattacatag 30265492  T
Q  315 ctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaat 411  Q
    ||||| ||||| | ||||  |||| |||||| ||||||||||   ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30265493 ctcaaaaataa-cgctttcaattcgatttttccattgttgcaccatcaagttcgattctaattattttccatctctttcaattcatttccagtgatgaat 30265591  T
Q  412 ttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||||||||||||| |||||||||||||||||||    
T  30265592 ttgtttcctttacttcccaataatttgtttcatgc 30265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 182 - 443
Target Start/End: Complemental strand, 38434201 - 38433937
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||||||||||||| || |||||||   ||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||  |||    
T  38434201 atttggatgacttttgcactgaaccgtgaggttcggtttgatttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataagaaat 38434102  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 378  Q
    ||||||||||  ||||||||| ||||||||||||  |||||||||||||||| |||| |||||| ||||||||   ||||| ||||||||||||||| ||    
T  38434101 attacttaaacttgtactagcccaattacatagcctaagaataatctcttttaattcgatttttccattgttgcaccatcacgttcgattctaattcttt 38434002  T
Q  379 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 443  Q
    | |||||| || |||||||||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  38434001 ttcatctcctttaattcatttccaatgatgaatttattttcttttcttcccaataatttgtttca 38433937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 10174566 - 10174322
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||||||    |||||||||||    
T  10174566 ggatgacttttgcactgaaccgcgcggtttg-ttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaa----aatgaatatta 10174472  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||| | |||||||||| ||||||   ||||||||||||||| |||||||||||||||   |||||||||||||| |||||| ||| ||    
T  10174471 cttaaacatgtactatcccaattacataactcaag---aatctcttttgattcgattttttcattgttgcaccatcaggttcgattataattcattttca 10174375  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
    |||||||||          ||||||||||||||||||||||||||| ||||||||||||||||    
T  10174374 tctctttca----------agtgatgaatttgtttcctttactttctaataatttgtttcatg 10174322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 446
Target Start/End: Original strand, 36176691 - 36176934
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || | ||||||| ||||||| | | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  36176691 ggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccgcaagaataatgactatta 36176790  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatcaggttcgattctaattcctttccatct 385  Q
    ||||||  ||||||||| ||||||||||||||||||| |||| || |||   ||               |||||||||| ||||||||||||||||||||    
T  36176791 cttaaacgtgtactagcccaattacatagctcaagaaaaatcactgttg---ca--------------ccatcaggttcaattctaattcctttccatct 36176873  T
Q  386 ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  36176874 ctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc 36176934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 279 - 442
Target Start/End: Complemental strand, 35893405 - 35893238
Alignment:
Q  279 aatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattc 375  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||||||   ||| | |||||||||||||    
T  35893405 aatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgatttgattttttcattgttgcaccatcacgctcgattctaattc 35893306  T
Q  376 cttt-ccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc 442  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35893305 cttttccatctttttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttc 35893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 267 - 446
Target Start/End: Complemental strand, 42545086 - 42544902
Alignment:
Q  267 gcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggtt 363  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||  |||||||||| || ||||||||||   ||| ||| |    
T  42545086 gcaagaataatgaatattacttaaatatgtaatagcccaataacatagctcaagaataatctaatttgattcaacttgttcattgttgcaccataaggct 42544987  T
Q  364 cgattctaattcctttccatctctttca--attcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
     |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  42544986 tgattttaattcttttccatctctttcaatattcatttccagtgatgaatttgtttcctttacttctcaataatttatttcatgc 42544902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 451
Target Start/End: Complemental strand, 23781182 - 23780977
Alignment:
Q  227 cggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataat 326  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |                 ||||||| |||||||||||||||    
T  23781182 cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatattcc-----------------caattacttagctcaagaataat 23781100  T
Q  327 ctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttccttta 423  Q
    |||||||||||  |||||| ||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  23781099 ctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatttcc-----tgaatttgtttccttta 23781005  T
Q  424 ctttccaataatttgtttcatgcctatg 451  Q
    ||| ||||||||||||||||||| ||||    
T  23781004 cttcccaataatttgtttcatgcttatg 23780977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 451
Target Start/End: Complemental strand, 23868135 - 23867930
Alignment:
Q  227 cggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataat 326  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |                 ||||||| |||||||||||||||    
T  23868135 cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatattcc-----------------caattacttagctcaagaataat 23868053  T
Q  327 ctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttccttta 423  Q
    |||||||||||  |||||| ||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  23868052 ctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatttcc-----tgaatttgtttccttta 23867958  T
Q  424 ctttccaataatttgtttcatgcctatg 451  Q
    ||| ||||||||||||||||||| ||||    
T  23867957 cttcccaataatttgtttcatgcttatg 23867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 186 - 338
Target Start/End: Original strand, 36176460 - 36176612
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || | ||||||| ||||||| | | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  36176460 ggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccgcaagaataatgactatta 36176559  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattc 338  Q
    ||||||  ||||||||| ||||||||||||||||||| |||||||||||||||    
T  36176560 cttaaacgtgtactagcccaattacatagctcaagaaaaatctcttttgattc 36176612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 9988586 - 9988722
Alignment:
Q  312 tagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatg 408  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||   |||| ||||||| |||||||||| |||||| ||||||||||||| |||||||    
T  9988586 tagcccaagaacaatctcttttgattcaattttttcattcttgcaccatcagattcgattttaattccttttcatctccttcaattcatttctagtgatg 9988685  T
Q  409 aatttgtttcctttactttccaataatttgtttcatg 445  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  9988686 aatttgtttccttttctttcaaataatttgtttcatg 9988722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 355 - 451
Target Start/End: Original strand, 38334707 - 38334803
Alignment:
Q  355 catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||| ||||||||||| ||||||| ||||    
T  38334707 catcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcattttcttcccaataatttgattcatgcttatg 38334803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 701658 - 701566
Alignment:
Q  183 tttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    ||||||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  701658 tttggatgacttttagactaaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 701566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 443
Target Start/End: Original strand, 17084520 - 17084706
Alignment:
Q  260 ccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---ca 356  Q
    |||||||||||||||||| |||||||||||||  ||||||| | ||||||||||   ||| |||||||| ||||||||| |||||| |||| |||   ||    
T  17084520 ccaaaccgcaagaataatcaatattacttaaacttgtactaacccaattacataatccaaaaataatctattttgattcgatttttccattattgcacca 17084619  T
Q  357 tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 443  Q
    ||| |||||| |||| ||  ||| |||||| ||||||  |||| |||||||||||||||||||||| ||  |||||||||| |||||    
T  17084620 tcaagttcgaatctatttgtttttcatctccttcaatcaattttcagtgatgaatttgtttccttttctccccaataatttatttca 17084706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 666903 - 666992
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  666903 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 666992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 27885718 - 27885807
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  27885718 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 27885807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 8409424 - 8409335
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||| ||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  8409424 ggatgacttttagactgaatcgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 8409335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 11917893 - 11917804
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | | |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  11917893 ggatgacttttagactaaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 11917804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 38334386 - 38334475
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  38334386 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaactaaaccaaaccgcaaaaata 38334475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 15068914 - 15068825
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||| ||||||||||| ||||    
T  15068914 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaaccgcaaaaata 15068825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 30002436 - 30002347
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| ||||| | |||||||| |||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||||||| ||||    
T  30002436 ggatgatttttagactgaaccgcgcggttcggttcggtttgcggtttacatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 30002347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 42545892 - 42545822
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaacca 257  Q
    |||||||||| || | |||||| |||||||||||| |||||||||||||||||| |||| |||||||||||    
T  42545892 gatgacttttgcactaaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccgaaccaaacca 42545822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 451
Target Start/End: Complemental strand, 35893247 - 35893205
Alignment:
Q  409 aatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  35893247 aatttgtttcctttacttcccaataatttgtttcatgcttatg 35893205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 691159 - 691226
Alignment:
Q  203 aaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaa 270  Q
    ||||||| |||| |||| |||||||||||| ||| | | |||| |||||||||||| |||||||||||    
T  691159 aaccgcatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaa 691226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 186 - 446
Target Start/End: Original strand, 6003964 - 6004227
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || ||||||||  |||| |||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||    
T  6003964 ggatgacttttgcactgaaccgcgaggtttggttcggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta 6004063  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||   |||||||||| |||||||||||||||||    
T  6004064 cttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcaattctaattcctttcca 6004163  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  6004164 tctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgc 6004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 189 - 446
Target Start/End: Original strand, 35531736 - 35531991
Alignment:
Q  189 tgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactt 288  Q
    |||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||     |||||||||||||||||||||||||    
T  35531736 tgacttttgcactgaaccgcacggttcagttcgatttgcagtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatattactt 35531830  T
Q  289 aaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatct 385  Q
    ||| |||||||||| ||||| ||||||||||||||||||  |||| |||| |||||| ||||||||   ||||| |||||||||||||||||||||||||    
T  35531831 aaacatgtactagcccaattgcatagctcaagaataatcgttttttattcgatttttccattgttgcaccatcatgttcgattctaattcctttccatct 35531930  T
Q  386 ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    ||||||||||||||||  | |||||| |||||||||||||| |||||||||||||||||||    
T  35531931 ctttcaattcatttccgtttatgaatgtgtttcctttacttcccaataatttgtttcatgc 35531991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 182 - 451
Target Start/End: Original strand, 21586419 - 21586685
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||||||||||||| || | |||||| ||||||||||     ||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  21586419 atttggatgacttttgcactaaaccgcgcggttcggtt-----tgcagtttgcatctcagcaaccgaaccaaaccaa-ccaaatcgcaagaataatgaat 21586512  T
Q  282 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctt 378  Q
    |||||||||| ||||||||||  |||||||||| ||||||||||| ||||| ||||| |||||| |||||||||| ||   |||||||||||||||||||    
T  21586513 attacttaaacatgtactagccaaattacatagttcaagaataatatctttcgattcgatttttccattgttgcaccatgaggttcgattctaattcctt 21586612  T
Q  379 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||  || ||||||||||||||| ||||    
T  21586613 tccatctctttcaattcatttccggtgatgaatttgtttcctttatttctcagtaatttgtttcatgcttatg 21586685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 176 - 451
Target Start/End: Original strand, 50562152 - 50562420
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || |||||||||||||| |||| ||  || |||||||||||||||| ||||||||||| ||||  |||||||||           ||||||||    
T  50562152 cacttggttcggatgacttttacactgaatcgtgcgattcggttcgatttgcgatttgcatctcaacaacaaaaccaaaccc----------caagaata 50562241  T
Q  276 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa 372  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||||   ||||||||||||||||||    
T  50562242 atgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttccattgttgcaccatcaggttcgattctaa 50562341  T
Q  373 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||||| ||||    
T  50562342 ttcctttccatctctttcaatttattttcagtgatgaatttgtttcatttacttccaaataatttgtttcatgcttatg 50562420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 247 - 451
Target Start/End: Complemental strand, 33002968 - 33002761
Alignment:
Q  247 gaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaatttttt 346  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||||||||||||||||| ||||||     
T  33002968 gaaccaaactaaaccaaaccgcaagaataatgaatatttcttaaatatgtaccagtccaattacatagctcaataataatctcttttgattcgatttttc 33002869  T
Q  347 cattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 443  Q
    ||||||||   |||||||||||||||||| ||||||||||||||||||||| |||||| |||| | |||||||||||||||| |||||||||||||||||    
T  33002868 cattgttgcaccatcaggttcgattctaactcctttccatctctttcaatttatttcctgtgaagtatttgtttcctttactctccaataatttgtttca 33002769  T
Q  444 tgcctatg 451  Q
    ||| ||||    
T  33002768 tgcttatg 33002761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 176 - 444
Target Start/End: Complemental strand, 32880823 - 32880547
Alignment:
Q  176 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||| || ||||||||||| || |||||||| | |||||||| | ||| ||||||||||||||||||| ||||||||||||     |||||||||| |    
T  32880823 cacttggttcggatgacttttgcactgaaccgcgcagttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaaaa 32880729  T
Q  276 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa 372  Q
    |||||||||||||||| |||||||||  |||||||||||||||||  |||||||||| ||||  |||||| ||||||||   ||||||||| ||||||||    
T  32880728 atgaatattacttaaacatgtactagtccaattacatagctcaagtttaatctctttcgatttgatttttccattgttgcaccatcaggtttgattctaa 32880629  T
Q  373 ttcctttccatctctttca----------attcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 444  Q
    |||||||||||||||||||          ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  32880628 ttcctttccatctctttcaattcatttccattcatttccagtgatgaatttgtttcctttacttcccaataatttctttcat 32880547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 263 - 446
Target Start/End: Complemental strand, 39098373 - 39098187
Alignment:
Q  263 aaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catca 359  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||| |||||| || |||||||||||||||   |||||    
T  39098373 aaccgcaagaataatgaatattacttaaacatgtactaacacaattaaatagctcaagaataatcttttttgaatcgattttttcattgttgcaccatca 39098274  T
Q  360 ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 446  Q
    || | |||||||||| ||||||||||||||||||||||||| |||||  || ||||||||||||||| |||||||||||||| ||||    
T  39098273 ggattgattctaatttctttccatctctttcaattcatttcgagtgacaaacttgtttcctttacttcccaataatttgtttgatgc 39098187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 215 - 451
Target Start/End: Complemental strand, 43030895 - 43030671
Alignment:
Q  215 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaa-ccgcaagaataatgaatattacttaaatatgtactagctcaattacata 313  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||               |||||  |||||||||    
T  43030895 cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaaccgcaagaataatgaata---------------ctagccaaattacata 43030811  T
Q  314 gctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaa 410  Q
    ||||||||||||||| ||| ||||| |||||| ||||||||||   ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43030810 gctcaagaataatctttttcgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccatctctttcaattcatctccagtgatgaa 43030711  T
Q  411 tttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||| ||||||||| || ||||||||||||||||||| ||||    
T  43030710 ttt-tttcctttatttcccaataatttgtttcatgcttatg 43030671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 48032712 - 48032836
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||    
T  48032712 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaaccgcaagaatcatgaatatta 48032811  T
Q  286 cttaaatatgtactagctcaattac 310  Q
    |||||| |||||||||| |||||||    
T  48032812 cttaaacatgtactagcccaattac 48032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 317 - 451
Target Start/End: Original strand, 27641870 - 27642007
Alignment:
Q  317 caagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaattt 413  Q
    |||||||||||||||||||||| |||||| |||||| |||   |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  27641870 caagaataatctcttttgattcgatttttccattgtagcaccatcaggttcgaatctaattcctctccatctctttcaattcattttcagtgatgaattt 27641969  T
Q  414 gtttcctttactttccaataatttgtttcatgcctatg 451  Q
     |||||||| ||| ||||||||||||||||||| ||||    
T  27641970 atttccttttcttcccaataatttgtttcatgcttatg 27642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 10369699 - 10369610
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  10369699 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 10369610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34795021 - 34794923
Alignment:
Q  177 acttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    ||||| || |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  34795021 acttggttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 34794923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 35401805 - 35401894
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  35401805 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata 35401894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 51149303 - 51149392
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| ||| |||||||||||||||||||  ||||||||||| ||||||||||| ||||    
T  51149303 ggatgacttttagactgaaccgcgcggttcggttcggtttacggtttgcatctcagcaacctaaccaaaccaaaccaaaccgcaaaaata 51149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 4669228 - 4669317
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||| | ||||||||| ||||    
T  4669228 ggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaaccgcaaaaata 4669317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 33361401 - 33361312
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||||| | |||||||| |||||  ||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  33361401 ggatgacttttagactgaaccgcgcggtttagttcagtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaaaaata 33361312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 27641794 - 27641865
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 258  Q
    |||||||||| || ||||||||  |||| | || | |||||||||||||||||||| ||| |||||||||||    
T  27641794 gatgacttttgcactgaaccgcgtggtttgatttggtttgcggtttgcatctcagccactaaaccaaaccaa 27641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 7e-93; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 188 - 451
Target Start/End: Original strand, 36827365 - 36827631
Alignment:
Q  188 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 287  Q
    ||||||||| || |||||| ||||||| |||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  36827365 atgacttttgcactgaaccacacggtttggttcggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaaccgcaagaataatgaatattact 36827464  T
Q  288 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc 384  Q
    |||| |||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||   |||||||||||||||||||| |||||||||    
T  36827465 taaacatgtactagcccaattacatagctcaagattaatctctttcgattcaatttttccattgttgcaccatcaggttcgattctaatttctttccatc 36827564  T
Q  385 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||| |||||||  |||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  36827565 tctttcaatttatttccaccgatgaatttgtttcttttacttcccaataatttgtttcatgcttatg 36827631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 30392591 - 30392324
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    |||||||||||  | |||||||| ||||| |||||  ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  30392591 ggatgacttttttactgaaccgcgcggtttggttcagtttgcggtttgtatctcaacaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta 30392492  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| |||||||||||| ||| |||||||||||||||||| |||||| ||||| |||   || ||||| ||||||||||||||||||    
T  30392491 cttaaacatgtactagcccaattacatagcccaacaataatctcttttgattcgatttttccattgctgcactatgaggtttgattctaattcctttcca 30392392  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  30392391 tctcttttaattcatttccagtgatgaatttgtttccttttc-ttccaataatttgtttcatgcttatg 30392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 186 - 444
Target Start/End: Complemental strand, 14549735 - 14549478
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||| | ||||||||||||     |||| |||||||||||||||||    
T  14549735 ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcatccgaaccaaaccaa-----accgtaagaataatgaatatta 14549641  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||   ||||||||||||||||| ||||||||||    
T  14549640 cttaaacatgtactagcccaattacatagctcaagaataatctcttttgattcgaattttccattgttgtaccatcaggttcgattctatttcctttcca 14549541  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttcc-aataatttgtttcat 444  Q
    |||||||||||| |||| |||||||||||||||||||||||||| || ||||| |||||||||    
T  14549540 tctctttcaattaattttcagtgatgaatttgtttcctttacttcccaaataaattgtttcat 14549478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 10661658 - 10661392
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 286  Q
    |||||||||| || |||||| | ||||| |||| | |||||| ||||||||||||||||  ||| ||||||| |||||||||||| |||||||||||  |    
T  10661658 gatgacttttgcactgaaccacgcggtttggtttggtttgcg-tttgcatctcagcaaccaaactaaaccaaaccaaaccgcaaggataatgaatatatc 10661560  T
Q  287 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 383  Q
    ||||| |||||||||| | |||||||||||||||||| |||| ||||||||| |||||||||||||||   ||||| ||||||||||||||| ||||||     
T  10661559 ttaaacatgtactagcccgattacatagctcaagaattatcttttttgattcgattttttcattgttgtaccatcatgttcgattctaattcatttccaa 10661460  T
Q  384 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  10661459 ctctttcaattcatttccagtgaagaatttgtttcctttacttcccaataatttgtttcatgcttatg 10661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 180 - 451
Target Start/End: Original strand, 18169596 - 18169865
Alignment:
Q  180 tgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatga 279  Q
    ||||| |||| |||||| || ||||||||  ||||||||| | ||||||||||||||||| ||| | |||||||| |||     || |||||||||||||    
T  18169596 tgattcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaa-----actgcaagaataatga 18169690  T
Q  280 atattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcc 376  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||| | ||||| |||||| |||| |||||   ||||||| ||||||||||||    
T  18169691 atattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttgattctaattcc 18169790  T
Q  377 tttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  18169791 tttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatg 18169865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 180 - 451
Target Start/End: Original strand, 18633162 - 18633431
Alignment:
Q  180 tgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatga 279  Q
    ||||| |||| |||||| || ||||||||  ||||||||| | ||||||||||||||||| ||| | |||||||| |||     || |||||||||||||    
T  18633162 tgattcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaa-----actgcaagaataatga 18633256  T
Q  280 atattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcc 376  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||| | ||||| |||||| |||| |||||   ||||||| ||||||||||||    
T  18633257 atattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttgattctaattcc 18633356  T
Q  377 tttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  18633357 tttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatg 18633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 215 - 443
Target Start/End: Complemental strand, 33069075 - 33068844
Alignment:
Q  215 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatag 314  Q
    ||||| |||||||||||||||||| |||||| ||||||||| || ||||||| ||| |||||| |||||||||||||| ||||| ||| ||||||||||     
T  33069075 cggtttgatttgcggtttgcatcttagcaaccgaaccaaacgaaaccaaaccacaaaaataatcaatattacttaaatttgtaccagcccaattacataa 33068976  T
Q  315 ctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaat 411  Q
    |||||||||||||||||||||||  |||||| ||||||||   |||||  |||||||||||||||||| ||| || |||||||||||| |||||||||||    
T  33068975 ctcaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattctaattccttttcatttccttcaattcattttcagtgatgaat 33068876  T
Q  412 ttgtttcctttactttccaataatttgtttca 443  Q
    || |||||||| ||| ||||||||||||||||    
T  33068875 ttatttccttttcttcccaataatttgtttca 33068844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 3682425 - 3682169
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| ||||| |||| | ||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  3682425 ggatgacttttccactgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta 3682331  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgtt---gcatcaggttcgattctaattcctttcca 382  Q
    | |||| |||||||||| |||||||||| |  |||||||||||||||||||||||||||| |||| ||    |||||||||| ||||||||| ||| |||    
T  3682330 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcaatttttccatttttccaccatcaggttcaattctaatttcttacca 3682231  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
    ||| |||||||||| ||||| ||| ||||||||||| ||| ||| ||||||| ||||||||||    
T  3682230 tctatttcaattca-ttccactgacgaatttgtttcattttcttcccaataacttgtttcatg 3682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 190 - 445
Target Start/End: Original strand, 36909923 - 36910165
Alignment:
Q  190 gacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactta 289  Q
    ||||||| || ||||| || |||||||||||| ||||||||||||||||||| ||| |||||| |||||     ||||||||||||||||||||          
T  36909923 gacttttgcattgaactgcgcggttcggttcggtttgcggtttgcatctcaggaaccgaaccataccaa-----accgcaagaataatgaatat------ 36910011  T
Q  290 aatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctc 386  Q
       |||||||||| ||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||   ||||||| ||||||||||| ||||||||||    
T  36910012 ---atgtactagcccaattacat-gctcaagaataatct-ttttgattccatttttccattgttgcaccatcaggtttgattctaattcatttccatctc 36910106  T
Q  387 tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 445  Q
    ||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||    
T  36910107 tttcaattcattttcggtgatgaatttatttcctttacttcccaataatttgtttcatg 36910165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 186 - 350
Target Start/End: Complemental strand, 44673236 - 44673068
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  44673236 ggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaactgcaagaataatgaatatta 44673137  T
Q  286 cttaaatatgtactagctcaat----tacatagctcaagaataatctcttttgattcaattttttcatt 350  Q
    |||||| |||||||||| ||||    |||||||||||| ||||||  ||||||||| ||||||||||||    
T  44673136 cttaaacatgtactagcccaattacatacatagctcaataataattgcttttgatttaattttttcatt 44673068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 186 - 357
Target Start/End: Original strand, 6200507 - 6200678
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || |||| ||  |||||  ||||| |||  ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  6200507 ggatgacttttgcactgaatcgtgcggtttcgttcggtttttggtttgcatcttagcaaccaaaccaaaccaaaccaaaccgcaagaataatgaatatta 6200606  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcat 357  Q
    || ||| |||||||||| |||||||||| | |||||||||||||||||||||| |||||| |||||||||||    
T  6200607 ctgaaacatgtactagcccaattacataacccaagaataatctcttttgattcgatttttccattgttgcat 6200678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 5802528 - 5802599
Alignment:
Q  187 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 258  Q
    ||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||||  |||||||||||    
T  5802528 gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccaaaccaaaccaa 5802599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 3006232 - 3006283
Alignment:
Q  215 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaacc 266  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  3006232 cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaacc 3006283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 42496467 - 42496565
Alignment:
Q  182 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 281  Q
    ||||| |||| |||| || |||||||||||||||||||||||||| | |||  |||| | |||  ||||||||      |||||||||||||||||||||    
T  42496467 atttgaatgatttttgcactgaaccgcacggttcggttcgatttgtgatttatatcttaacaatcgaaccaaa-----tcaaaccgcaagaataatgaat 42496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 44673073 - 44673023
Alignment:
Q  393 ttcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 443  Q
    ||||||| ||||||||||||||||| |||||||| | | ||||||||||||    
T  44673073 ttcattttcagtgatgaatttgttttctttacttccaagtaatttgtttca 44673023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 167; Significance: 3e-89; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 69106 - 69374
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  69106 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgcaagaataatgaatatta 69205  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| ||||||||||  ||||||||||| ||| |||||||||||||||||| |||||| ||||||||   |||||  |||||||||||||||||||||    
T  69206 cttaaacatgtactagcctaattacatagcccaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca 69305  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||| ||||    
T  69306 tctctttcaattcatttccagtgataaatttgtttcattttcttcccaataatttgtttcatgcttatg 69374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 186 - 356
Target Start/End: Original strand, 77212 - 77382
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  77212 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgcaagaataatgaatatta 77311  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca 356  Q
    |||||| ||||||||||  ||||||||||| ||| ||||||| |||||||||| |||||| ||||||||||    
T  77312 cttaaacatgtactagcctaattacatagcccaataataatcacttttgattcgatttttccattgttgca 77382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 106547 - 106278
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| ||||||||||| |||||||||| | |||||||||||||||||| |||| |||||||||| | |||| |||||||||||||||||||||    
T  106547 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcaacaaccgaaccaaacccaaccaacccgcaagaataatgaatatta 106448  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| ||||||||||  |||||||||||  || |||||| |||||| |||| |||||| ||||||||   |||||  |||||||||||||||||||||    
T  106447 cttaaacatgtactagcctaattacatagcctaataataatttctttttattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca 106348  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttc-ctttactttccaataatttgtttcatgcctatg 451  Q
    ||||||||||||||||||||||||| ||||||||||  ||| ||| | ||||||||||||||||| ||||    
T  106347 tctctttcaattcatttccagtgataaatttgtttcatttttcttccgaataatttgtttcatgcttatg 106278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 248 - 451
Target Start/End: Complemental strand, 129092 - 128885
Alignment:
Q  248 aaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttc 347  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||| ||||||||||||  |||| |||||| |    
T  129092 aaccaaaccaaaccaacccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctctttatattcgatttttcc 128993  T
Q  348 attgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttc-ctttactttccaataatttgtttca 443  Q
    |||||||   |||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| ||| ||||||||||||||||    
T  128992 attgttgcaccatcaaattcgattctaattcctttccatctctttcaattcattttcagtgataaatttgtttcatttttcttcccaataatttgtttca 128893  T
Q  444 tgcctatg 451  Q
    ||| ||||    
T  128892 tgcttatg 128885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 40145 - 40413
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || ||||||||  || |||||| | |||| ||||| ||||||| |||| |||||||||||| ||||||| ||||||||||||||||||    
T  40145 ggatgacttttgcactgaaccgcgtggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaaccacaagaataatgaatatta 40244  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| || ||||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||   |||||||||| |||||||||  ||||||    
T  40245 cttaaacatctactagcccaattacatagctcaagaataatttcttttgattcaatttgtccattgttgcaacatcaggttccattctaatttatttcca 40344  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 451  Q
    |||||||||||||||||| |||||||||||| ||| |||||||| || ||||||||||| |||| ||||    
T  40345 tctctttcaattcatttcaagtgatgaatttatttactttacttccccataatttgtttaatgcttatg 40413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 186 - 423
Target Start/End: Original strand, 47341 - 47581
Alignment:
Q  186 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 285  Q
    ||||||||||| || ||||||||| || |||||| | |||| ||||| ||||||| |||| |||||||||||| ||||||| ||||||||||||||||||    
T  47341 ggatgacttttgcactgaaccgcatggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaaccacaagaataatgaatatta 47440  T
Q  286 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 382  Q
    |||||| || ||||||| ||||||||||||||||||||||| ||||||||||| |||| | ||||||||   |||||||||| |||||||||  ||||||    
T  47441 cttaaacatctactagcccaattacatagctcaagaataatttcttttgattcgatttgtccattgttgcaacatcaggttccattctaatttatttcca 47540  T
Q  383 tctctttcaattcatttccagtgatgaatttgtttccttta 423  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  47541 tctctttcaattcatttcaagtgatgaatttgtttacttta 47581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 5490 - 5577
Alignment:
Q  188 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 275  Q
    |||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5490 atgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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