View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390_high_89 (Length: 346)
Name: NF1390_high_89
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1390_high_89 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 30 - 335
Target Start/End: Complemental strand, 32028798 - 32028493
Alignment:
| Q |
30 |
taagggactttaattaaattcaggtagtttgggaactgaaacaataattgatcatattttatttatcttccggtcacgaactccagattactaaaactcg |
129 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
32028798 |
taagggactttaattaaattcaggtagtttgggaactgaaacaataattgatcatattttacttatcttccggtcacgaactccagattactaaaactcg |
32028699 |
T |
|
| Q |
130 |
aacatggatgtatttttccacgctctatcattcaacaatgacctaatacaactacatttctgatatgctatccccactttcactcctcttatttcaaacc |
229 |
Q |
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|| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32028698 |
aatatggatgtatttttccgcgctctatcattcaacaatgacctaatacaactacatttctgatatgctatccccactttcactcctcttatttcaaacc |
32028599 |
T |
|
| Q |
230 |
tagcactcagacattcatgattcacatttcacacgtagctcatatcataaaagttaaagtttcacaacctaattgattcttcacatgtcacatgtatcgc |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32028598 |
tagcactcagacattcatgattcacatttcacacgtagctcatatcataaaagttaaagtttcacaacctaattgattcttcacatgtcacatgtatcgc |
32028499 |
T |
|
| Q |
330 |
tttcat |
335 |
Q |
| |
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|||||| |
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| T |
32028498 |
tttcat |
32028493 |
T |
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