View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1390_low_160 (Length: 251)
Name: NF1390_low_160
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1390_low_160 |
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[»] scaffold0169 (2 HSPs) |
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[»] scaffold0077 (1 HSPs) |
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[»] scaffold0014 (1 HSPs) |
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[»] scaffold0181 (1 HSPs) |
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[»] scaffold0054 (1 HSPs) |
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[»] scaffold0004 (1 HSPs) |
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[»] scaffold0098 (1 HSPs) |
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[»] scaffold0208 (1 HSPs) |
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[»] scaffold0027 (1 HSPs) |
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[»] scaffold0025 (1 HSPs) |
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[»] scaffold0650 (1 HSPs) |
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[»] scaffold0360 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 40)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 44000326 - 44000187
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| | || |
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|
T |
44000326 |
acatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagtttttt-gtccaccaaaaatcgtataagaccaaaaattattcaataccat |
44000228 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgttttgtcttgtgatgtattatt |
141 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
44000227 |
aaaagtttgtcttgtattgttttgtcttgtgatgtattatt |
44000187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 43999983 - 43999896
Alignment:
Q |
142 |
aataccataaaagtttgtattgtgttgttttgtcttgtgatgttttgtctagtatatactcttttgctaaaacgcgcgtatgtttcat |
229 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |
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|
T |
43999983 |
aataccataaaagtttgtcttgtgttgttttgtcttgtgatgttttgtctagtacatactcttttgttaaaacgcacgtatgtttcat |
43999896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 2135131 - 2135000
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
|||||||||||||||||||||||| |||||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
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|
T |
2135131 |
cacaactttttgtcccacgtacaaattatctaaaataccaaaatagcacttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
2135033 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||||||| ||||| || |||||| |||| |
|
|
T |
2135032 |
aatttgtcttgtgttgttctgccttgtgttgta |
2135000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 44117000 - 44116902
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
44117000 |
cacaactttttgtcccacgtacaagttgtctaaaatacaaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
44116902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 4851480 - 4851611
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
4851480 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
4851578 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
4851579 |
aatttgtcctgtcttgttctgccttgtgttgta |
4851611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 28675851 - 28675720
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
28675851 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
28675753 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
28675752 |
aatttgtcctgtgttgttctgccttgtgttgta |
28675720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 39052862 - 39052960
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||||| || | ||||||||||||||||||||| |
|
|
T |
39052862 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacaacaaattactcaatgctataaaa |
39052960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 28624950 - 28625058
Alignment:
Q |
11 |
tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgt |
110 |
Q |
|
|
||||||||| ||||| ||||||||| |||||||||||| ||| |||||||||| |||||||| |||||||| ||||| | |||||||||||| |
|
|
T |
28624950 |
tttttgtcctacgtataagttatctaaaatacaaaaat--cattttagtctaccaaaaatcttataagacaaaaaattattcaataccataaaagtttgt |
28625047 |
T |
|
Q |
111 |
cttgtattgtt |
121 |
Q |
|
|
||||| ||||| |
|
|
T |
28625048 |
cttgtgttgtt |
28625058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 31883046 - 31883161
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||| |||||| |||||| |
|
|
T |
31883046 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaa |
31883144 |
T |
|
Q |
105 |
gtttgtcttgtattgtt |
121 |
Q |
|
|
|||||| ||| ||||| |
|
|
T |
31883145 |
atttgtcctgtgttgtt |
31883161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 38213415 - 38213317
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||||| || |||||||||||| ||| |||||| |
|
|
T |
38213415 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-ccattttgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaa |
38213317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 1344731 - 1344829
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
1344731 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
1344829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 3864699 - 3864796
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||| ||||| || |||||||||||||||| |||||| |
|
|
T |
3864699 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcc-ccaaaaatcatataaaacaaaaaattactcaatgccataaaa |
3864796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 12349195 - 12349293
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||| ||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
12349195 |
cacaactttatgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
12349293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 24571342 - 24571244
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||| ||||||||| ||| |||||||||||||| |||| |||||||||| |||| || | |||||||||||||| |||||| |
|
|
T |
24571342 |
cacaactttttgtcccatgtacaagttgtctaaaatacaaaaatag-gattttgtcccccaaaaatcgaataaaacaacaaattactcaatgccataaaa |
24571244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 29584936 - 29584838
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| | |||||||||||||||| |||||| |
|
|
T |
29584936 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccttcaaaaatcgtataaaataaaaaattactcaatgcaataaaa |
29584838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29646131 - 29646017
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagac-caaaaattactcaatgcta |
99 |
Q |
|
|
||||||||||||||||||||||||||||||| | | |||||| ||||||| |||| ||||||||||||||| || |||||||| | ||||| | |
|
|
T |
29646131 |
acatcacaactttttgtcccacgtacaagttgtttaaaataccaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaaattatttaatgcca |
29646033 |
T |
|
Q |
100 |
taaaagtttgtcttgt |
115 |
Q |
|
|
||||| |||||||||| |
|
|
T |
29646032 |
taaaaatttgtcttgt |
29646017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 47958456 - 47958546
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatg |
96 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||| |
|
|
T |
47958456 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatg |
47958546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 51925232 - 51925337
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| | || ||||| |||||| |||| ||||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
51925232 |
cacaactttttgtcccacgtacaagttgtttttaataccaaaata-acatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
51925330 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
51925331 |
atttgtc |
51925337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 53557819 - 53557917
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
53557819 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
53557917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 54622820 - 54622918
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||| ||||||||||||||| ||| |||||| ||||||| |||| ||||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
54622820 |
cacaactttttatcccacgtacaagttgtctaaaataccaaaatag-catttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
54622918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33364798 - 33364907
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||| |||||| || |
|
|
T |
33364798 |
acatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat |
33364896 |
T |
|
Q |
101 |
aaaagtttgtc |
111 |
Q |
|
|
|||| |||||| |
|
|
T |
33364897 |
aaaaatttgtc |
33364907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3695312 - 3695414
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| ||| |||||| ||||||| ||| |||||||| |||||| || | |||||||||||||| || |
|
|
T |
3695312 |
acatcacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtatttta-tcccccaaaaattgtataaaacaacaaattactcaatgccat |
3695410 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
3695411 |
aaaa |
3695414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 26282411 - 26282542
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||| ||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| || ||| |
|
|
T |
26282411 |
cacaactttttgtcccacgtataagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
26282509 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| |||| ||||||||| |||| |
|
|
T |
26282510 |
aatttgtcatgtgctgttctgtcttgtgttgta |
26282542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 44000235 - 44000193
Alignment:
Q |
142 |
aataccataaaagtttgtattgtgttgttttgtcttgtgatgt |
184 |
Q |
|
|
|||||||||||||||||| |||| ||||||||||||||||||| |
|
|
T |
44000235 |
aataccataaaagtttgtcttgtattgttttgtcttgtgatgt |
44000193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 49748935 - 49749025
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatg |
96 |
Q |
|
|
||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||||||||| || |||||||| |||||| |
|
|
T |
49748935 |
cacaactttttgtcccacgtacaagttgttttaaataccaaaata-acatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatg |
49749025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 20609672 - 20609717
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
20609672 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
20609717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 21221384 - 21221482
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| ||||||| |||||| || |||||||||||||||| |||||| |
|
|
T |
21221384 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaa |
21221482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21373991 - 21373946
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
21373991 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
21373946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 22484767 - 22484812
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||| ||||| ||| |||||||||||||| |
|
|
T |
22484767 |
cacaactttttgtcccacgtataagttgtctaaaatacaaaaatag |
22484812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25860441 - 25860543
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||||||||||| |||||||||||| ||| |||||| |||||| || | ||||||||||||||| || |||||||||||| ||| || |
|
|
T |
25860441 |
acatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatag-cattttgttctccaaaaatcgtataaaacaaaaaattactcattgccat |
25860539 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
25860540 |
aaaa |
25860543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 34026728 - 34026630
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||| ||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||| | |||||| |
|
|
T |
34026728 |
cacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaa |
34026630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 25927351 - 25927395
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
25927351 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
25927395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 42636427 - 42636471
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
42636427 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
42636471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 43999977 - 43999941
Alignment:
Q |
99 |
ataaaagtttgtcttgtattgttttgtcttgtgatgt |
135 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |
|
|
T |
43999977 |
ataaaagtttgtcttgtgttgttttgtcttgtgatgt |
43999941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 51259804 - 51259848
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
51259804 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
51259848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 3964349 - 3964304
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| ||||||||| ||| |||||| ||||||| |
|
|
T |
3964349 |
cacaactttttgtcccatgtacaagttgtctaaaataccaaaatag |
3964304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 45690977 - 45691029
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtc |
111 |
Q |
|
|
|||| ||||||||||||||| || |||||||| |||||||||||||| |||||| |
|
|
T |
45690977 |
gtcctccaaaaatcgtataaaac-aaaaattattcaatgctataaaaatttgtc |
45691029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 50678859 - 50678814
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |
|
|
T |
50678859 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag |
50678814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 10747221 - 10747169
Alignment:
Q |
63 |
ccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgt |
115 |
Q |
|
|
||||||||||||||| || |||||||| |||||| |||||| |||||||||| |
|
|
T |
10747221 |
ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcttgt |
10747169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 53046723 - 53046763
Alignment:
Q |
64 |
caaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
53046723 |
caaaaatcgtataaaacaaaaaattactcaatgccataaaa |
53046763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 16595194 - 16595297
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||| | | |||| |
|
|
T |
16595194 |
cacaactttttgtcccacgtacaagttatctaaaatacaaaaatag-ctttttgttcaccaaaaatcgtataagaccaaaaattattcaataccaaaaaa |
16595292 |
T |
|
Q |
105 |
gtttg |
109 |
Q |
|
|
||||| |
|
|
T |
16595293 |
gtttg |
16595297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 29672368 - 29672494
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
29672368 |
cacaactttttgtcccacgtacaagttatctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccatgaaa |
29672466 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
| |||||| ||| ||||| ||||||||| |
|
|
T |
29672467 |
aatttgtcctgtgttgttctgtcttgtg |
29672494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 12753370 - 12753503
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| |||||| |||| ||||||||||||||| || | |||||||||||||| |||||| |
|
|
T |
12753370 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaa |
12753468 |
T |
|
Q |
105 |
-gtttgtcttgtattgttttgtcttgtgatgtatt |
138 |
Q |
|
|
|||||| ||| ||||| ||||||||| |||||| |
|
|
T |
12753469 |
tttttgtcatgtgttgttctgtcttgtgttgtatt |
12753503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 29563271 - 29563369
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
29563271 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
29563369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 41709837 - 41709739
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||| ||||||||||||||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
41709837 |
cacaactttttgtccaacgtacaagttatctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
41709739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 45446515 - 45446417
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
45446515 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
45446417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 8673100 - 8673231
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| || ||| |
|
|
T |
8673100 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
8673198 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||||| |||||| |||| |
|
|
T |
8673199 |
attttgtcctgtgctgttttgccttgtgttgta |
8673231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 6386636 - 6386538
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
6386636 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
6386538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 15001526 - 15001481
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
T |
15001526 |
cacaactttttgtcccacgtacaagttatctaaaataccaaaatag |
15001481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 32020046 - 32020144
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||| ||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
32020046 |
cacaactttttgttccacgtacaagttgtctaaaataccaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
32020144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 32303630 - 32303728
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| |||||| |
|
|
T |
32303630 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
32303728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 34063188 - 34063090
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
34063188 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
34063090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37664324 - 37664373
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
37664324 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
37664373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 13406986 - 13407111
Alignment:
Q |
11 |
tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaaagtttg |
109 |
Q |
|
|
|||||||| |||||||||||| ||| |||||| ||||||| || | ||||||||||||||| || ||||||||||||||||||| |||| |||| |
|
|
T |
13406986 |
tttttgtctcacgtacaagttgtctaaaataccaaaatagcatttt-gtgccccaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttg |
13407084 |
T |
|
Q |
110 |
tcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|| ||| ||||| || |||||| |||| |
|
|
T |
13407085 |
tcatgtgttgttctgccttgtgttgta |
13407111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 35225726 - 35225597
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||||||||||| || ||||||||| ||| |||||||||||||| ||| ||||||||| ||||| || |||||| ||||| | || |
|
|
T |
35225726 |
acatcacaactttttgtcacaagtacaagttgtctaaaatacaaaaatag-catttcgtcacccaaaaatcatataaaacaggaaattattcaataccat |
35225628 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||| |||||||||| ||||| ||||||||| |
|
|
T |
35225627 |
aaaaatttgtcttgtgttgttctgtcttgtg |
35225597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 30543067 - 30543198
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||| |||||||||||||||| ||| |||||| |||||| |||| ||||||||||||||| || ||||||||||||||| |||||| |
|
|
T |
30543067 |
cacaacttttcgtcccacgtacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaa |
30543165 |
T |
|
Q |
105 |
-gtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||||| ||| ||||| || |||||| |||| |
|
|
T |
30543166 |
tatttgtcctgtgttgttctgccttgtgttgta |
30543198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3251697 - 3251799
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||| ||| ||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| || |
|
|
T |
3251697 |
acatcacaactttttatcctacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccat |
3251795 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
3251796 |
aaaa |
3251799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 4052540 - 4052444
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||| |||||| |
|
|
T |
4052540 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaac--aaaattactcaatgccataaaa |
4052444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 31513628 - 31513759
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||| | ||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
31513628 |
cacaactttttgtcctaggtacaagttgtctaaaataccaaaatagcatttt-gtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
31513726 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
31513727 |
aatttgtcatgtgttgttctgccttgtgttgta |
31513759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54234 - 54189
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaa |
46 |
Q |
|
|
|||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
54234 |
acatcacaactttttgtcccacatacaagttatcgaaaatacaaaa |
54189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21272744 - 21272699
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
21272744 |
cacaactttttgtcccacgtacaagttgtctaaaatactaaaatag |
21272699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 22756456 - 22756501
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
22756456 |
cacaactttttgtatcacgtacaagttatctaaaatacaaaaatag |
22756501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 25478303 - 25478205
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||| ||||||||||| ||| |||||| ||||||| |||| ||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
25478303 |
cacaactttttgtcctacgtacaagttgtctaaaataccaaaatag-tattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
25478205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 27104019 - 27103921
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| |||||| |
|
|
T |
27104019 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
27103921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 41548678 - 41548573
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| |||||| |||| ||||||||||||||| || |||||||| |||||| |||||| |
|
|
T |
41548678 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaata-acattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaa |
41548580 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
41548579 |
atttgtc |
41548573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 5859518 - 5859619
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaag |
105 |
Q |
|
|
||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||| ||||||||||| ||||| ||||| | ||||||| |
|
|
T |
5859518 |
acaactttttgtcatacgtacaagttatctaaaatactaaaatag-tattttgtccataaaaaatcttataagaccaataattaatcaatacaataaaag |
5859616 |
T |
|
Q |
106 |
ttt |
108 |
Q |
|
|
||| |
|
|
T |
5859617 |
ttt |
5859619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 10467124 - 10467019
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||| || ||| |||||| |
|
|
T |
10467124 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattctatgtcataaaa |
10467026 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
10467025 |
atttgtc |
10467019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 14005089 - 14005133
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
14005089 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
14005133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 30501205 - 30501161
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||||||||| |
|
|
T |
30501205 |
cacaactttttgtcccacgtacaagttgcctaaaatacaaaaata |
30501161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 31732123 - 31732026
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||| ||| |||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
31732123 |
acaactttttgtctcacatacaagttgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
31732026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 37618437 - 37618534
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaa |
103 |
Q |
|
|
|||||||||||||| |||||||||||| | |||||||| ||||||| |||| |||||||| |||||| || |||||||| ||||||| ||||| |
|
|
T |
37618437 |
cacaactttttgtctcacgtacaagttgttttaaataccaaaatag-catttcgtcccccaaaaattgtataaaacaaaaaattattcaatgccataaa |
37618534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 5968909 - 5969007
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||| |||||||||||| || ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
5968909 |
cacaactttttatcccacgtacaaattgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
5969007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3800984 - 3801033
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| ||| ||| |||||||| |||||||||||||| |
|
|
T |
3800984 |
acatcacaactttttgtttcacatactagttatctaaaatacaaaaatag |
3801033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 16485854 - 16485899
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||| ||||| ||||| ||| |||||||||||||| |
|
|
T |
16485854 |
cacaactttttgtcctacgtataagttttctaaaatacaaaaatag |
16485899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 18297469 - 18297534
Alignment:
Q |
65 |
aaaaatcgtataagaccaaaaattactc-aatgctataaaagtttg-tcttgtattgttttgtctt |
128 |
Q |
|
|
||||||||||||||||||||||||| || ||| | |||||| |||| |||||||||||||| |||| |
|
|
T |
18297469 |
aaaaatcgtataagaccaaaaattattcaaataccataaaattttgttcttgtattgttttatctt |
18297534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 7394859 - 7394903
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| |||||| |
|
|
T |
7394859 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaata |
7394903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 35225635 - 35225587
Alignment:
Q |
142 |
aataccataaaagtttgtattgtgttgttttgtcttgtgatgttttgtc |
190 |
Q |
|
|
|||||||||||| ||||| |||||||||| ||||||||| ||| ||||| |
|
|
T |
35225635 |
aataccataaaaatttgtcttgtgttgttctgtcttgtgttgtgttgtc |
35225587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27824715 - 27824834
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||| ||||||| ||||||||| ||||| | || |
|
|
T |
27824715 |
acatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatag-ctttttgtccaacaaaaatcatataagatcaaaaattattcaataccat |
27824813 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgtt |
121 |
Q |
|
|
||||||||||| ||||||||| |
|
|
T |
27824814 |
aaaagtttgtcatgtattgtt |
27824834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 10960060 - 10959935
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||| || ||| || | ||||||| |||||| |
|
|
T |
10960060 |
cacaactttttgtcccacgtacaagttgtctaaaatacaaaaatag-cattttgtcccccaaaaatcgtataaaacaaaatatcattcaatgccataaaa |
10959962 |
T |
|
Q |
105 |
gtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||||| ||| ||||| || |||||| |
|
|
T |
10959961 |
atttgtcatgtgttgttctgccttgtg |
10959935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 3932872 - 3933007
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||| ||||||| || |
|
|
T |
3932872 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccat |
3932970 |
T |
|
Q |
101 |
-aaaagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||| |||||| ||| |||||||||||||| |||| |
|
|
T |
3932971 |
aaaaaatttgtcctgtgctgttttgtcttgtgttgta |
3933007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15277345 - 15277447
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||| ||||||||||||||| ||| |||||| ||||||| ||| ||||||||||||||| || | ||||||||||||||||| |
|
|
T |
15277345 |
acatcacaactttttatcccacgtacaagttgtctaaaataccaaaatag-cattttgtcttccaaaaatcgtataaaacaacaaattactcaatgctat |
15277443 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
15277444 |
aaaa |
15277447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24242728 - 24242634
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatg |
96 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||| |
|
|
T |
24242728 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatg |
24242634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 2614956 - 2614825
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| | |||||||||||||||| || ||| |
|
|
T |
2614956 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaa |
2614858 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
2614857 |
aatttgtcatgtgttgttctgccttgtgttgta |
2614825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 17867895 - 17867764
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
|||||||||||||||||||||||| || ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
17867895 |
cacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
17867797 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
17867796 |
aatttgtcctgtgttgttctgccttgtgttgta |
17867764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 17877678 - 17877547
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
|||||||||||||||||||||||| || ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
17877678 |
cacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
17877580 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
17877579 |
aatttgtcctgtgttgttctgccttgtgttgta |
17877547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 29424652 - 29424743
Alignment:
Q |
21 |
acgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtctt |
113 |
Q |
|
|
||||||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||||| ||||| | ||||||||| ||||| |
|
|
T |
29424652 |
acgtacaagttatctaaaatacaaaaatagtttttt-gtccaccaaaaaacgtacaagaccaaaaattattcaataccataaaagttcgtctt |
29424743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 31870169 - 31870284
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||| | ||| ||| |||||||||||||| |||| |||||| |||||||| || |||||||| ||||||| |||||| |
|
|
T |
31870169 |
cacaactttttgtcccacgtataggttgtctaaaatacaaaaatag-catttcgtcccccaaaactcgtataaaacaaaaaattattcaatgccataaaa |
31870267 |
T |
|
Q |
105 |
gtttgtcttgtattgtt |
121 |
Q |
|
|
|||||| ||| ||||| |
|
|
T |
31870268 |
atttgtcatgtgttgtt |
31870284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 3259743 - 3259645
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||| ||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
3259743 |
cacaactttttatcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
3259645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 7396194 - 7396239
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
T |
7396194 |
cacaactttttgtctcacgtacaagttatctaaaatacaaaaatag |
7396239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 11613860 - 11613958
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| | | |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
11613860 |
cacaactttttgtcccacgtacaagttgtataaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
11613958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 32132449 - 32132547
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || | |||||||||||||| |||||| |
|
|
T |
32132449 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaa |
32132547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 34176890 - 34176792
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
34176890 |
cacaactttttgtcccacgtacaagtagtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
34176792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 10485217 - 10485101
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||| |||||| ||||| |
|
|
T |
10485217 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaat |
10485119 |
T |
|
Q |
105 |
gtttgtcttgtattgttt |
122 |
Q |
|
|
|||||| ||| |||||| |
|
|
T |
10485118 |
atttgtcctgtgttgttt |
10485101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 28068819 - 28068753
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttg |
124 |
Q |
|
|
||||||||||| | |||||||||||||||||| |||| |||||||||||| |||| | |||||||| |
|
|
T |
28068819 |
gtccaccaaaagtggtataagaccaaaaattatacaatactataaaagtttctcttatgttgttttg |
28068753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 166992 - 167037
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
166992 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
167037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 32614059 - 32614112
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtc |
111 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||| | ||||||||||||| |
|
|
T |
32614059 |
gtccaccaaaaatcgtataagaccaaaaattatataataccataaaagtttgtc |
32614112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 9902727 - 9902771
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
9902727 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
9902771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 10552785 - 10552710
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactca--atgctataaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||||||||||||||||||||| ||||||||| ||| || ||||||||||||||| | || |||||||||||| |
|
|
T |
10552785 |
gtccaccaaaaatcgtataagatcaaaaattattcaatatatcataaaagtttgtcttatgttattttgtcttgtg |
10552710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 17443321 - 17443277
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
17443321 |
acaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
17443277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 18057578 - 18057534
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
18057578 |
acaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
18057534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 24203422 - 24203378
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
24203422 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
24203378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 8342783 - 8342829
Alignment:
Q |
155 |
tttgtattgtgttgttttgtcttgtgatgttttgtctagtatatact |
201 |
Q |
|
|
|||||||||||||||||| ||||||| ||| |||||||||| ||||| |
|
|
T |
8342783 |
tttgtattgtgttgttttttcttgtgttgtattgtctagtacatact |
8342829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 10324180 - 10324278
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| |||||| |||| | ||||||||||||| || |||||||||||||| | |||||| |
|
|
T |
10324180 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaata-acattttgtccccaaaaaatcgtataaaacaaaaaattactcaatcccataaaa |
10324278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 3379770 - 3379725
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| ||| |||||||| |||||||||| ||||||| |
|
|
T |
3379770 |
cacaactttttgtctcacatacaagttgtcttaaataccaaaatag |
3379725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 11279188 - 11279143
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |
|
|
T |
11279188 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag |
11279143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 11382124 - 11382079
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |
|
|
T |
11382124 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag |
11382079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 29054416 - 29054375
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaa |
46 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||||||| |
|
|
T |
29054416 |
cacaactttttgtctcacgtacaagttgtctaaaatacaaaa |
29054375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32409917 - 32409966
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||||| ||||||| ||| |||||| ||||||| |
|
|
T |
32409917 |
acatcacaactttttgtcccactcacaagttgtctaaaataccaaaatag |
32409966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 4494185 - 4494221
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatac |
42 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||| |
|
|
T |
4494185 |
acaactttttgtcccacgtacaagttgtctaaaatac |
4494221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 8177950 - 8177994
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||||||| |||||| ||| |||||| |||||| |
|
|
T |
8177950 |
cacaactttttgtcccacgttcaagttgtctaaaataccaaaata |
8177994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 14925526 - 14925570
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| |||||||| ||| |||||| ||||||| |
|
|
T |
14925526 |
acaactttttgtcccacttacaagttgtctaaaataccaaaatag |
14925570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 32860111 - 32860067
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||| ||||||| |||||||||||| ||| ||||||||||||| |
|
|
T |
32860111 |
cacaaccttttgtctcacgtacaagttttctaaaatacaaaaata |
32860067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 49)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 7001865 - 7001792
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||| ||||||||| |
|
|
T |
7001865 |
gtccaccaaaaatcgtataagaccaaaaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtg |
7001792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 33552865 - 33552996
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
33552865 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
33552963 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| |||||||| |||||| |||| |
|
|
T |
33552964 |
aatttgtcctgtgttgttttgccttgtgttgta |
33552996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 44324365 - 44324470
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| | |||||||| ||||||| |||| ||||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
44324365 |
cacaactttttgtcccacgtacaagttgttttaaataccaaaatag-catttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
44324463 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
44324464 |
atttgtc |
44324470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 24002402 - 24002310
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgc |
97 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |
|
|
T |
24002402 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaatgc |
24002310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 20802550 - 20802685
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| || |
|
|
T |
20802550 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccat |
20802648 |
T |
|
Q |
101 |
-aaaagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||| |||||| ||| ||||| || |||||| |||| |
|
|
T |
20802649 |
aaaaaatttgtcctgtgttgttctgccttgtgttgta |
20802685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 55065356 - 55065491
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
55065356 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatttt-gtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
55065454 |
T |
|
Q |
105 |
gtttgtcttgtattgttttgtcttgtgatgtattatt |
141 |
Q |
|
|
|||||| ||| |||| || |||||| |||| |||| |
|
|
T |
55065455 |
atttgtcctgtgctgttctgccttgtgttgtactatt |
55065491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 23521943 - 23521845
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
23521943 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
23521845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 43641162 - 43641064
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
43641162 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
43641064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 24210382 - 24210249
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||| ||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||| | |||||| |
|
|
T |
24210382 |
cacaactttttatcccacgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaa |
24210283 |
T |
|
Q |
105 |
-gtttgtcttgtattgttttgtcttgtgatgtat |
137 |
Q |
|
|
|||||| ||| ||||| || |||||| ||||| |
|
|
T |
24210282 |
tatttgtcatgtgttgttctgccttgtgttgtat |
24210249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 56154684 - 56154553
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| || ||| |
|
|
T |
56154684 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
56154586 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| |||| |||| || |||||| |||| |
|
|
T |
56154585 |
aatttgtcatgtactgttctgccttgtgttgta |
56154553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 4325854 - 4325756
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||| |||| || |||||||||||| ||| |||||| |
|
|
T |
4325854 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaaaaatcgcataaaacaaaaaattactcattgccataaaa |
4325756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 9512363 - 9512461
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| |||||| |
|
|
T |
9512363 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
9512461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 37695564 - 37695673
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||| ||| ||| ||||| |||||| |||| ||||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
37695564 |
cacaactttttgtcccacgtacaggttgtctaaaatatcaaaata-acatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
37695662 |
T |
|
Q |
105 |
gtttgtcttgt |
115 |
Q |
|
|
|||||||||| |
|
|
T |
37695663 |
atttgtcttgt |
37695673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 42870028 - 42869938
Alignment:
Q |
14 |
ttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||| ||||| ||| |||||||||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
42870028 |
ttgtcccacgtataagttgtctaaaatacaaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
42869938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9435466 - 9435338
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaa-gttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgcta |
99 |
Q |
|
|
|||||||||||||||| || | ||||| ||||||| |||||||||||||| ||| ||||||||| |||||||||||||||| | ||||| | |
|
|
T |
9435466 |
acatcacaactttttgaccaatatacaaagttatctaaaatacaaaaatagcttttt-gtctaccaaaaatggtataagaccaaaaataattcaatatca |
9435368 |
T |
|
Q |
100 |
taaaagtttgtcttgtattgttttgtcttg |
129 |
Q |
|
|
|||||||||||| ||| ||||| ||||||| |
|
|
T |
9435367 |
taaaagtttgtcgtgtgttgttctgtcttg |
9435338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 29616233 - 29616102
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
|||||||||||||||||||||||| || ||| |||||| |||||| |||| ||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
29616233 |
cacaactttttgtcccacgtacaaattgtctaaaataccaaaata-acattttgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
29616135 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| ||||||||| |||| |
|
|
T |
29616134 |
aatttgtcatgtgttgttctgtcttgtgttgta |
29616102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 33177055 - 33177186
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||| ||||||| ||| |||||| |||||| |||| ||||||||||||||| || ||||||||||||||| |||||| |
|
|
T |
33177055 |
cacaactttttgtcccacgcacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaa |
33177153 |
T |
|
Q |
105 |
-gtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||||| | | ||||| ||||||||| |||| |
|
|
T |
33177154 |
tatttgtcctttgttgttctgtcttgtgttgta |
33177186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 36743711 - 36743847
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||| |||||| || | |||||||||||||| || ||| |
|
|
T |
36743711 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaattgtataaaacaacaaattactcaatgccataaaa |
36743809 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgtattatt |
141 |
Q |
|
|
| |||||||||| |||| || ||| || ||||||||| |
|
|
T |
36743810 |
aatttgtcttgtgctgttctgccttatgttgtattatt |
36743847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 55593948 - 55593817
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||| ||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
55593948 |
cacaactttttatcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
55593850 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| ||||| ||| |||||| || |||||| |||| |
|
|
T |
55593849 |
aatttgttttgcattgttctgccttgtgttgta |
55593817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21580093 - 21579958
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||||||||||| ||||||||| || ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||| | || |
|
|
T |
21580093 |
acatcacaactttttgtctcacgtacaaattgtctaaaataccaaaatag-catgttgtccctcaaaaatcgtataaaactaaaaattactcaataccat |
21579995 |
T |
|
Q |
101 |
-aaaagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||| |||||| ||| ||||| || |||||| |||| |
|
|
T |
21579994 |
aaaaaatttgtcctgtgttgttctgccttgtgttgta |
21579958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 50727936 - 50728034
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
50727936 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
50728034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 50735950 - 50736048
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
50735950 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
50736048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2725152 - 2725245
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatg |
96 |
Q |
|
|
||||||||||||||||||| ||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||| |
|
|
T |
2725152 |
acatcacaactttttgtcc-acgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatg |
2725245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 7554980 - 7555105
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| ||| | ||||||| | || ||||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
7554980 |
cacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagcatttcgg-cctccaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
7555078 |
T |
|
Q |
105 |
gtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||||| ||| |||| ||||||||| |
|
|
T |
7555079 |
atttgtcgtgtgatgttctgtcttgtg |
7555105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 21202802 - 21202705
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||||||| ||| |||||| |
|
|
T |
21202802 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcc-ccaaaaatcgtataaaacaaaaaattactcattgccataaaa |
21202705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 29785560 - 29785658
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||| |||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
29785560 |
cacagctttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
29785658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 38812583 - 38812538
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
38812583 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
38812538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40792484 - 40792435
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| || ||||||||||||| |||||||||||||| |
|
|
T |
40792484 |
acatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatag |
40792435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 41720903 - 41720862
Alignment:
Q |
8 |
aactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||| |||||| ||||||||||||| |
|
|
T |
41720903 |
aactttttgtcccacgtacaaattatctaaaatacaaaaata |
41720862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 47642514 - 47642604
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatg |
96 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||| |||||| |
|
|
T |
47642514 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattattcaatg |
47642604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 985293 - 985214
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtgatgtatt |
138 |
Q |
|
|
||||| |||||||| ||||||||||||||||| |||| | |||||| |||||||| | |||||||||||||| |||||| |
|
|
T |
985293 |
gtccagcaaaaatcatataagaccaaaaattattcaa-accataaaaatttgtcttatgatgttttgtcttgtgttgtatt |
985214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 14296654 - 14296562
Alignment:
Q |
11 |
tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||| ||| |||||| |||||| ||| ||||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
14296654 |
tttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
14296562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 14314902 - 14314810
Alignment:
Q |
11 |
tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||| ||| |||||| |||||| ||| ||||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
14314902 |
tttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
14314810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 16320582 - 16320469
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||| ||| || |||||||||||||| ||| |||||| |||||||| || ||||||| ||||||| |||||| |
|
|
T |
16320582 |
cacaactttttgtcccacgtacaggttgcctaaaatacaaaaatagaatttca-tcccccaaaactcgtataaaac--aaaattattcaatgccataaaa |
16320486 |
T |
|
Q |
105 |
gtttgtcttgtattgtt |
121 |
Q |
|
|
|||||||||| ||||| |
|
|
T |
16320485 |
atttgtcttgtgttgtt |
16320469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 20644319 - 20644379
Alignment:
Q |
61 |
caccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgtt |
121 |
Q |
|
|
||||||||||||||||| | ||||||||| ||||||| |||||||| |||| ||| ||||| |
|
|
T |
20644319 |
caccaaaaatcgtataaaatcaaaaattattcaatgcgataaaagtgtgtcatgtgttgtt |
20644379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31445895 - 31445943
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||| | ||||||||| |||||| ||||||||||||| |
|
|
T |
31445895 |
acatcacaactttttgccacacgtacaaattatctaaaatacaaaaata |
31445943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 32181325 - 32181281
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
32181325 |
acaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
32181281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 52949783 - 52949679
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| | ||||||||| |||||| |||||| |
|
|
T |
52949783 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcgtataa-aacaaaaattattcaatgtcataaaa |
52949686 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
52949685 |
atttgtc |
52949679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 9807218 - 9807114
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaag |
105 |
Q |
|
|
|||||||||||||| ||||||||||| ||| |||||| ||||||| |||| ||||||||||||||| || ||||||| ||||||| ||| || |
|
|
T |
9807218 |
acaactttttgtcctacgtacaagttgtctaaaataccaaaatag-catttcgtcctccaaaaatcgtataaaacataaaattattcaatgccatacaaa |
9807120 |
T |
|
Q |
106 |
tttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
9807119 |
tttgtc |
9807114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 2629972 - 2630018
Alignment:
Q |
3 |
atcacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||| |||||||||||| ||| |||||| |||||| |
|
|
T |
2629972 |
atcacaactttttgtctcacgtacaagttgtctaaaataccaaaata |
2630018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 42772818 - 42772724
Alignment:
Q |
8 |
aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaa |
103 |
Q |
|
|
|||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||| ||||| || |||||||||||||||| ||||| |
|
|
T |
42772818 |
aactttttgtcccacgtataagttatctaaaataccaaaata-acattttttcctccaaaaatcatataaaacaaaaaattactcaatgccataaa |
42772724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 49152174 - 49152220
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
49152174 |
gtccatcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
49152220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 12600949 - 12600904
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |
|
|
T |
12600949 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag |
12600904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 28115315 - 28115270
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| ||||||| |
|
|
T |
28115315 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaatag |
28115270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 37865816 - 37865771
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| ||||||||| ||| |||||| ||||||| |
|
|
T |
37865816 |
cacaactttttgtcccatgtacaagttgtctaaaataccaaaatag |
37865771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 50186591 - 50186546
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||| |||||| |||||||| ||| |||||||||||||| |
|
|
T |
50186591 |
cacaactttttatcccacatacaagttgtctaaaatacaaaaatag |
50186546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 50729565 - 50729610
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |
|
|
T |
50729565 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag |
50729610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1231374 - 1231338
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaata |
41 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| |
|
|
T |
1231374 |
cacaactttttgtcccacgtacaagttgtctaaaata |
1231338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 3649699 - 3649655
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| || |||||| |
|
|
T |
3649699 |
cacaactttttgtcccacgtacaagttgtctaaaacaccaaaata |
3649655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 29661387 - 29661251
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||| ||||||||||||||||||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||||||| ||| |
|
|
T |
29661387 |
cacaactttttatcccacgtacaagttatctaaaataccaaaatagcatttt-gtcccacaaaaatcgtataaaacaaaaaattactcaatgctataaaa |
29661289 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgtattatt |
141 |
Q |
|
|
| |||||||||| ||||| || |||||| |||| |||| |
|
|
T |
29661288 |
aatttgtcttgtgttgttctgccttgtgttgtactatt |
29661251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 46633761 - 46633630
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
46633761 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
46633663 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||||||| ||||| || |||||| |||| |
|
|
T |
46633662 |
aatttgtcttgtgttgttctgccttgtgttgta |
46633630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 34117520 - 34117392
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||| ||||||| ||| ||||||||| ||| |||| | ||||||| |||| ||||||||||||||| || |||||||| ||||||| || |
|
|
T |
34117520 |
acatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttc-gtcccccaaaaatcgtataaaacgaaaaattattcaatgccat |
34117422 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgttttgtcttgt |
130 |
Q |
|
|
|||| |||||||||| ||||| |||||||| |
|
|
T |
34117421 |
aaaaatttgtcttgtgttgttctgtcttgt |
34117392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 11321916 - 11322047
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
11321916 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
11322014 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| |||| |||| || |||||| |||| |
|
|
T |
11322015 |
aatttgtcatgtactgttctgccttgtgttgta |
11322047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 21784935 - 21784836
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||||||||| || ||||||||||||||| |||||| |
|
|
T |
21784935 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcctccaaaaatcgtataaaacataaaattactcaatgccataaaa |
21784837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 29372863 - 29372925
Alignment:
Q |
59 |
tccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgtt |
121 |
Q |
|
|
||||||||||||| ||||||||||||||||| | ||| | ||||||||||||||||||||||| |
|
|
T |
29372863 |
tccaccaaaaatcatataagaccaaaaattatttaataccataaaagtttgtcttgtattgtt |
29372925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 3922734 - 3922832
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||| || ||||| |||||||||| |||||| |
|
|
T |
3922734 |
cacaactttttgtcccacgtacaagttatctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaaatactcaatgccataaaa |
3922832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 10932588 - 10932686
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
10932588 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
10932686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 40753219 - 40753121
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
40753219 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
40753121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 47947824 - 47947726
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
47947824 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
47947726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 47953254 - 47953156
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
47953254 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
47953156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 18386589 - 18386456
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||| || ||| |
|
|
T |
18386589 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaa |
18386491 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgtatt |
138 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||||| |
|
|
T |
18386490 |
aatttgtcatgtgttgttctgccttgtgttgtatt |
18386456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 44748758 - 44748661
Alignment:
Q |
6 |
acaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||||||||| || |||||||||||| ||| |||||| |
|
|
T |
44748758 |
acaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaa |
44748661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 32873800 - 32873931
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
32873800 |
cacaactttttgtctcacgtacaagttgtctgaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
32873898 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||| |
|
|
T |
32873899 |
aatttgtcatgtgttgttctgccttgtgttgta |
32873931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 41211231 - 41211330
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| ||| ||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
41211231 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttttatccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
41211330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 43158717 - 43158848
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| | ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
43158717 |
cacaactttttgtcccacgtacaagttgtctaaaacatcaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
43158815 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| |||| |||| ||||||||| |||| |
|
|
T |
43158816 |
aatttgtcctgtactgttctgtcttgtgttgta |
43158848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 26371840 - 26371938
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
26371840 |
cacaactttttgtcccacgtacaagttgtctaaaatactaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
26371938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 26994256 - 26994354
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
26994256 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
26994354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 29992729 - 29992813
Alignment:
Q |
8 |
aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaa |
94 |
Q |
|
|
||||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| |||| |
|
|
T |
29992729 |
aactttttgtctcacgtacaagttatctaaaatacaaaataa--ttttttgtccaccaaaaatcgtataagaccaaaaattattcaa |
29992813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 36769600 - 36769698
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| ||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
36769600 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
36769698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41665602 - 41665651
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||| |||||||||||| ||| |||||||||||||| |
|
|
T |
41665602 |
acatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatag |
41665651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 26652930 - 26652825
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||| || |||||||| |||||| |||||| |
|
|
T |
26652930 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccgccaaaaatcgtataaaacaaaaaattattcaatgtcataaaa |
26652832 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
26652831 |
atttgtc |
26652825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 34295435 - 34295544
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||| ||||| || |||||||| |||||| |||||| |
|
|
T |
34295435 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtcccccaaaaatcatataaaacaaaaaattattcaatgtcataaaa |
34295533 |
T |
|
Q |
105 |
gtttgtcttgt |
115 |
Q |
|
|
|||||||||| |
|
|
T |
34295534 |
atttgtcttgt |
34295544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9913593 - 9913484
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||| ||||||||||| ||| ||| |||||| |||||| |||| ||||||||||||||| || |||||||| ||||| | || |
|
|
T |
9913593 |
acatcacaactttttttcccacgtacaggttgtctaaaataccaaaata-acatttcgtcccccaaaaatcgtataaaactaaaaattattcaattccat |
9913495 |
T |
|
Q |
101 |
aaaagtttgtc |
111 |
Q |
|
|
|||| |||||| |
|
|
T |
9913494 |
aaaaatttgtc |
9913484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9927281 - 9927172
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||| ||||||||||| ||| ||| |||||| |||||| |||| ||||||||||||||| || |||||||| ||||| | || |
|
|
T |
9927281 |
acatcacaactttttttcccacgtacaggttgtctaaaataccaaaata-acatttcgtcccccaaaaatcgtataaaactaaaaattattcaattccat |
9927183 |
T |
|
Q |
101 |
aaaagtttgtc |
111 |
Q |
|
|
|||| |||||| |
|
|
T |
9927182 |
aaaaatttgtc |
9927172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 34519572 - 34519527
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| ||||||||| ||| |||||||||||||| |
|
|
T |
34519572 |
cacaactttttgtcccaggtacaagttgtctaaaatacaaaaatag |
34519527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 329538 - 329409
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| || ||| || ||||||| |||| ||||||||| ||||| || | |||||| ||||| | || |
|
|
T |
329538 |
acatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatag-cattttgtcccccaaaaatcatataaaacaagaaattattcaataccat |
329440 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||| |||||| |||| |||| || |||||| |
|
|
T |
329439 |
aaaaatttgtcatgtactgttatgccttgtg |
329409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 18470745 - 18470650
Alignment:
Q |
8 |
aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||| ||||| || |||||||||||||||| |||||| |
|
|
T |
18470745 |
aactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
18470650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 22724564 - 22724607
Alignment:
Q |
7 |
caactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||| ||||||||||||||||| ||| |||||||||||||| |
|
|
T |
22724564 |
caactttatgtcccacgtacaagttgtctaaaatacaaaaatag |
22724607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 30849329 - 30849408
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaaagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||| ||||||||||||||| || |||||||||||||||| || |||| ||||| ||| ||||| ||||||||| |||| |
|
|
T |
30849329 |
gtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgttgttctgtcttgtgttgta |
30849408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1363704 - 1363586
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
|||||||||||||||||| |||||||| ||| || |||||||||||||| || | |||||||| |||||| || |||||||| ||||||| || |
|
|
T |
1363704 |
acatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatag-catttcgtac-ccaaaaattgtataaaacaaaaaattattcaatgccat |
1363607 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgtt |
121 |
Q |
|
|
|||| |||||| ||| ||||| |
|
|
T |
1363606 |
aaaaatttgtcatgtgttgtt |
1363586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 29455937 - 29455995
Alignment:
Q |
66 |
aaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttg |
124 |
Q |
|
|
|||||| |||||||||||| |||| ||||| | ||||||||||||| ||| |||||||| |
|
|
T |
29455937 |
aaaatcatataagaccaaatattattcaataccataaaagtttgtcatgtgttgttttg |
29455995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 37967042 - 37967008
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatct |
35 |
Q |
|
|
||||||||||||||||| ||||||||||||||||| |
|
|
T |
37967042 |
acatcacaactttttgttccacgtacaagttatct |
37967008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 26910441 - 26910486
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| || |||||||||||||| |
|
|
T |
26910441 |
cacaactttttgtcacacgtacaagttgtcaaaaatacaaaaatag |
26910486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 47316787 - 47316844
Alignment:
Q |
64 |
caaaaatcgtataagaccaaaaattactcaatgctat-aaaagtttgtcttgtattgt |
120 |
Q |
|
|
|||||||||||||| || |||||||||||||||| || |||| |||||||||| |||| |
|
|
T |
47316787 |
caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgt |
47316844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1870199 - 1870163
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaata |
41 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| |
|
|
T |
1870199 |
cacaactttttgtcccacgtacaagttgtctaaaata |
1870163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39788257 - 39788154
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||||| || |||||||||||||| | || |
|
|
T |
39788257 |
acatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacatttttgtcccccaaaaatcgtataaaacaaaaaattactcaataccat |
39788158 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
39788157 |
aaaa |
39788154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 4818176 - 4818302
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
4818176 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
4818274 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
| |||||||||| ||||| || |||||| |
|
|
T |
4818275 |
aatttgtcttgtgttgttctgccttgtg |
4818302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 5571680 - 5571776
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||| ||||||||||| ||| |||||| ||||||| |||| ||||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
5571680 |
cacaactttttgtccaacgtacaagttgtctaaaataccaaaatagcatt---gtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
5571776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17031217 - 17031134
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaatta |
89 |
Q |
|
|
|||||||||| |||||||||||||||||| | |||||||||||||| |||||| ||||||| ||||||||||||||||| |
|
|
T |
17031217 |
cacaacttttcgtcccacgtacaagttatttaaaatacaaaaatag-ctttttgtccacaaaaaatcatataagaccaaaaatta |
17031134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 28090556 - 28090654
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||| || |||||||||||||| ||||||| |
|
|
T |
28090556 |
cacaactttttgtcccacgtacaagttgtctaaaatacaaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattactcaataatataaaa |
28090654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 40182528 - 40182393
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||| ||||||||| ||| |||||| ||||||| ||| |||||||||||||| || |||||||||||||||| || |
|
|
T |
40182528 |
acatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatag-cattttgtctctcaaaaatcgtataaaacaaaaaattactcaatgccat |
40182430 |
T |
|
Q |
101 |
-aaaagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||| |||||| ||| ||||||| |||||| |||| |
|
|
T |
40182429 |
aaaaaatttgtcatgtgctgttttgccttgtgttgta |
40182393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 3735417 - 3735312
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||||| || |||||||| |||||| |||||| |
|
|
T |
3735417 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcataaaa |
3735319 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
3735318 |
atttgtc |
3735312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7523236 - 7523187
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
7523236 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
7523187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 31770627 - 31770725
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||| ||||| || |||||||||||||||| |||||| |
|
|
T |
31770627 |
cacaactttttgtcccacgtacaagttgtctgaaataccaaaatag-cattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaa |
31770725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 32313846 - 32313773
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
||||| |||||||||||||||| ||||||||| ||||| ||||| || |||||| ||| ||||| ||||||||| |
|
|
T |
32313846 |
gtccagcaaaaatcgtataagatcaaaaattaatcaatactatacaaatttgtcatgtgttgttctgtcttgtg |
32313773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 32528775 - 32528677
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
32528775 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
32528677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 8561014 - 8561132
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||| ||| ||||||||| ||| |||||| |||||| |||| ||||||||||||||| || |||||||| ||||||| || |
|
|
T |
8561014 |
acatcacaactttttgttccaggtacaagttgtctaaaataccaaaata-acatttcgtcc-ccaaaaatcgtataaaacaaaaaattaatcaatgccat |
8561111 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgtt |
121 |
Q |
|
|
|||| |||||| ||| ||||| |
|
|
T |
8561112 |
aaaaatttgtcatgttttgtt |
8561132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 2351740 - 2351642
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||| || || |||||||||||||||| |||||| |
|
|
T |
2351740 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccctcaaaaatcgtacaaaacaaaaaattactcaatgccataaaa |
2351642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 6284334 - 6284433
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatac-aaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| || |||||| |||||||| |||| |||||||||||||| || |||||||||||||||| ||||| |
|
|
T |
6284334 |
cacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa |
6284432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 7208266 - 7208364
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| ||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
7208266 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgttcc-tcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
7208364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 31644506 - 31644391
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| | ||||||| ||||| || ||||||| |||||| |||||| |
|
|
T |
31644506 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccctaaaaatcatataaaacataaaattattcaatgtcataaaa |
31644408 |
T |
|
Q |
105 |
gtttgtcttgtattgtt |
121 |
Q |
|
|
|||||||||| ||||| |
|
|
T |
31644407 |
atttgtcttgtgttgtt |
31644391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 39918567 - 39918469
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| |||||| |||| ||||||||||||||| || ||||||||||||| |||||||| |
|
|
T |
39918567 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaata-acattttgtcccccaaaaatcgtataaaacataaaattactcaatactataaaa |
39918469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 21739197 - 21739242
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
21739197 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
21739242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 29241438 - 29241340
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| || ||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
29241438 |
cacaactttttgtcccacgtacaagttggctaaaatatcaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
29241340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 32093017 - 32093062
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||||||| |||||| |||||| ||||||| |
|
|
T |
32093017 |
cacaactttttgtcccacgtacaaattatctaaaataccaaaatag |
32093062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34794951 - 34794902
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||| ||||| ||| |||||| ||||||| |
|
|
T |
34794951 |
acatcacaactttttgtcccacgtataagttgtctaaaataccaaaatag |
34794902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 553457 - 553413
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
553457 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
553413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 700637 - 700681
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||| |||||||||||||||| |||||| |||||| |
|
|
T |
700637 |
cacaactttttgtctcacgtacaagttatctaaaataccaaaata |
700681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 4689734 - 4689778
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||||||||| |
|
|
T |
4689734 |
cacaactttttgtcccacgtacaagttgcctaaaatacaaaaata |
4689778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 7770315 - 7770359
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| || ||||||||||||| |
|
|
T |
7770315 |
cacaactttttgtcccacgtacaagttgcctaaaatacaaaaata |
7770359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24036294 - 24036246
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||| ||||||||||||||| ||| |||||| |||||| |
|
|
T |
24036294 |
acatcacaactttttatcccacgtacaagttgtctaaaataccaaaata |
24036246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 31880108 - 31880243
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||| ||||||| ||||||||||| ||| |||||| ||||||| |||| |||| |||||||||| || |||||||| |||||| || |
|
|
T |
31880108 |
acatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaacaatcgtataatacaaaaaattattcaatgtcat |
31880206 |
T |
|
Q |
101 |
-aaaagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||| |||||| |||| |||| || |||||| |||| |
|
|
T |
31880207 |
aaaaaatttgtcatgtactgttctgccttgtgttgta |
31880243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 40489397 - 40489299
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| |||||| |||| ||||||| |||||| || |||||||||||||||| |||||| |
|
|
T |
40489397 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaata-acattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaa |
40489299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 11963401 - 11963356
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||| |||||| ||| |||||| ||||||| |
|
|
T |
11963401 |
cacaactttttgtcccacgtgcaagttgtctaaaataccaaaatag |
11963356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 23091398 - 23091471
Alignment:
Q |
64 |
caaaaatcgtataagaccaaaaattactcaatgctataa-aagtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
|||||||||||||| || ||| |||||||||||| |||| || |||||||||| ||||| | ||||||| |||| |
|
|
T |
23091398 |
caaaaatcgtataaaacaaaacattactcaatgccataagaaatttgtcttgtgttgttctatcttgtgttgta |
23091471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 8136897 - 8136853
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||| ||||||||||| ||| |||||| |||||| |
|
|
T |
8136897 |
cacaactttttgtcctacgtacaagttgtctaaaataccaaaata |
8136853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0169
Description:
Target: scaffold0169; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 12572 - 12670
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
12572 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgctataaaa |
12670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 18090 - 18188
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
18090 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgctataaaa |
18188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 38)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16386927 - 16386825
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || |
|
|
T |
16386927 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccat |
16386829 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
16386828 |
aaaa |
16386825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 4895407 - 4895337
Alignment:
Q |
61 |
caccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||||||||||||||||||| |||| ||| ||||| ||||||| |||||| |||| ||||||||||||||| |
|
|
T |
4895407 |
caccaaaaatcgtataagactaaaacttattcaatactataaacgtttgtattgtgttgttttgtcttgtg |
4895337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 844829 - 844927
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
844829 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
844927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 1601242 - 1601116
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| ||||||| ||||||||||||||||| || || |||||||||||| ||| || ||| |
|
|
T |
1601242 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaatagcatttt-gtccaccaaaaatcgtacaaaacaaaaaattactcattgccataaaa |
1601144 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
| |||||||||| ||||| || |||||| |
|
|
T |
1601143 |
aatttgtcttgtgttgttctgccttgtg |
1601116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 16437431 - 16437321
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
16437431 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatttt-gtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
16437333 |
T |
|
Q |
105 |
gtttgtcttgta |
116 |
Q |
|
|
|||||| |||| |
|
|
T |
16437332 |
atttgtcctgta |
16437321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 31004201 - 31004096
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||| ||||| || |||||||| ||||||| |||||| |
|
|
T |
31004201 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-tatttcgtcccccaaaaatcctataaaacaaaaaattattcaatgccataaaa |
31004103 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
31004102 |
atttgtc |
31004096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 45490980 - 45491113
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctata-aa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| ||| || |
|
|
T |
45490980 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccatacaa |
45491078 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgtatt |
138 |
Q |
|
|
| |||||| ||| |||| || |||||| |||||| |
|
|
T |
45491079 |
aatttgtcatgtgctgttctgccttgtgttgtatt |
45491113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 6711151 - 6711282
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||| ||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
6711151 |
cacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
6711249 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||||||| |||| || |||||| |||| |
|
|
T |
6711250 |
aatttgtcttgtgctgttctgccttgtgttgta |
6711282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 7183987 - 7183856
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||| ||||||||||| ||| |||||| || |||| ||| |||||||||||||| || |||||||||||||||| || ||| |
|
|
T |
7183987 |
cacaactttttgtcctacgtacaagttgtctaaaataccaatatagtatttt-gtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
7183889 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||||||||| ||||||||| |||| |
|
|
T |
7183888 |
aatttgtcctgtattgttctgtcttgtgttgta |
7183856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 12890307 - 12890209
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| | |||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
12890307 |
cacaactttttgtcccacgtacaagttgtctaagataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
12890209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 16451196 - 16451098
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
16451196 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
16451098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 17888017 - 17887883
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| || ||||||||||||||| || | |||||||||||||| || ||| |
|
|
T |
17888017 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccccccaaaaatcgtataaaacaacaaattactcaatgccataaaa |
17887918 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgtatt |
138 |
Q |
|
|
| |||||| ||| ||||| || |||||| |||||| |
|
|
T |
17887917 |
aatttgtcatgtgttgttctgccttgtgttgtatt |
17887883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 28340408 - 28340506
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
28340408 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
28340506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 42510594 - 42510496
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
42510594 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
42510496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 50540413 - 50540315
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||| ||||| || | |||||||||||||| |||||| |
|
|
T |
50540413 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtcccccaaaaatcatataaaacaacaaattactcaatgccataaaa |
50540315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 25539924 - 25539819
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||| |||||||| | |||||||| ||||||| |||| ||||||||||||||| || |||||||| |||| || |||||| |
|
|
T |
25539924 |
cacaactttttgtcccacctacaagttgttttaaataccaaaatag-catttcgtcccccaaaaatcgtataaaacaaaaaattattcaaagccataaaa |
25539826 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
25539825 |
atttgtc |
25539819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 30798848 - 30798920
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgttttgtcttgt |
130 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||| |||||| ||||| | ||||||| |||||||| |
|
|
T |
30798848 |
gtccaccaaaaatcgtataagaccaaaaattattcaatatcataaaattttgttatatattgttctgtcttgt |
30798920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 30105788 - 30105883
Alignment:
Q |
8 |
aactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||| ||||| |||||| |
|
|
T |
30105788 |
aactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattacttaatgccataaaa |
30105883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 35387416 - 35387514
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
35387416 |
cacaactttttgttccacgtacaagttgtctaaaataccaaaatagcatttta-tccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
35387514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44738143 - 44738244
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| ||||| ||||||| | | |||||||||||||| || |||||||||||||||| || |
|
|
T |
44738143 |
acatcacaactttttgtcccacgtacaagttgtctaaaatagcaaaatagttttta--ttcctcaaaaatcgtataaaacaaaaaattactcaatgccat |
44738240 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
44738241 |
aaaa |
44738244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1351540 - 1351585
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
1351540 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
1351585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 16476260 - 16476305
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
16476260 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
16476305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 24339744 - 24339840
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||| ||||||||||||||| ||| |||||| ||||||| |||| ||||| ||||||||| || |||||||| ||||||| |||||| |
|
|
T |
24339744 |
cacaactttttttcccacgtacaagttgtctaaaataccaaaatag---cattgtcccccaaacatcgtataaaacaaaaaattattcaatgccataaaa |
24339840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 26118320 - 26118418
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||| ||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
26118320 |
cacaactttttgtcccacgtaaaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
26118418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46447737 - 46447688
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
T |
46447737 |
acatcacaactttttgttccacgtacaagttatctaaaatatcaaaatag |
46447688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 51264564 - 51264466
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| | | |||||| ||||||| |||| ||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
51264564 |
cacaactttttgtcccacgtacaagttgtttaaaatactaaaatag-cattttgtcctttaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
51264466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 26764900 - 26764944
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
26764900 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
26764944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 45658890 - 45658785
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||| |||||||| | |||||||| ||||||| |||| ||||||||| ||||| || |||||||| |||| || |||||| |
|
|
T |
45658890 |
cacaactttttgtcccacctacaagttgttttaaataccaaaatag-catttcgtcccccaaaaatcatataaaacaaaaaattattcaaagccataaaa |
45658792 |
T |
|
Q |
105 |
gtttgtc |
111 |
Q |
|
|
|||||| |
|
|
T |
45658791 |
atttgtc |
45658785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 50382508 - 50382552
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| ||||||||| |
|
|
T |
50382508 |
cacaactttttgtcccacgtacaagttgtctaaaacacaaaaata |
50382552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 38663201 - 38663086
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| |||||| |||| |||||||||||||| || |||||||| |||||| |||||| |
|
|
T |
38663201 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaata-acattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgtcataaaa |
38663103 |
T |
|
Q |
105 |
gtttgtcttgtattgtt |
121 |
Q |
|
|
|||||| ||| ||||| |
|
|
T |
38663102 |
atttgtcctgtgttgtt |
38663086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 4895375 - 4895337
Alignment:
Q |
142 |
aataccataaaagtttgtattgtgttgttttgtcttgtg |
180 |
Q |
|
|
||||| ||||| ||||||||||||||||||||||||||| |
|
|
T |
4895375 |
aatactataaacgtttgtattgtgttgttttgtcttgtg |
4895337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 51703327 - 51703393
Alignment:
Q |
66 |
aaaatcgtataagaccaaaaattactcaatgctat-aaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
||||| |||||| || |||||||||||||||| || |||| |||||| |||||||||||| |||||| |
|
|
T |
51703327 |
aaaatggtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgttttgccttgtg |
51703393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 2761661 - 2761774
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||| |||||||| || |||||| |||||| |||||||||||||| ||| || ||||||| ||||| ||||||||||| ||||| |||||||| |
|
|
T |
2761661 |
cacaattttttgtctcaagtacaaattatctaaaatacaaaaatagattttt-gtcaac-aaaaatcatataaaaccaaaaattattcaatactataaaa |
2761758 |
T |
|
Q |
105 |
gtttgtcttgtattgt |
120 |
Q |
|
|
|| |||| ||| |||| |
|
|
T |
2761759 |
gtctgtcatgtgttgt |
2761774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 41967954 - 41967999
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |
|
|
T |
41967954 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag |
41967999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 6029406 - 6029450
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| || |||||| |
|
|
T |
6029406 |
cacaactttttgtcccacgtacaagttgtctaaaacaccaaaata |
6029450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 16643287 - 16643331
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||||| |||| ||| ||| ||||||||||||| |
|
|
T |
16643287 |
cacaactttttgtcccacatacaggttgtctaaaatacaaaaata |
16643331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 46154969 - 46154925
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| |||||| |
|
|
T |
46154969 |
cacaactttttgtcccacttacaagttgtctaaaataccaaaata |
46154925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 51703268 - 51703312
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||||| |||| ||| ||| ||||||||||||| |
|
|
T |
51703268 |
cacaactttttgtcccacctacatgttgtctaaaatacaaaaata |
51703312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 7503 - 7610
Alignment:
Q |
11 |
tttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgt |
110 |
Q |
|
|
|||||||| ||||||| |||| ||| |||||| ||||||| ||||| |||||| ||||||||||||||||| ||||| |||||||||||||| |
|
|
T |
7503 |
tttttgtctcacgtacgagttgtctaaaataccaaaatagattttttgtccattaaaaattatataagaccaaaaattattcaatactataaaagtttgt |
7602 |
T |
|
Q |
111 |
cttgtatt |
118 |
Q |
|
|
|||||||| |
|
|
T |
7603 |
cttgtatt |
7610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 31)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32497979 - 32497877
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| || |
|
|
T |
32497979 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccat |
32497881 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
32497880 |
aaaa |
32497877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 11114936 - 11114807
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||| |||| | ||||||| |||| | || |||||||||| || |||||||| ||||||| || |
|
|
T |
11114936 |
acatcacaactttttgtcccacgcacaagttgtctaaaattccaaaatag-tatttcgtccgctaacaatcgtataaaacgaaaaattattcaatgccat |
11114838 |
T |
|
Q |
101 |
aaaagtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||| ||| |||| ||||||| ||||||||| |
|
|
T |
11114837 |
aaaaatttttcttatattgttctgtcttgtg |
11114807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 16177913 - 16178036
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||| | |||| ||||||||||||||| || ||||||| |||||||||||||| |
|
|
T |
16177913 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaat-ggaatttcgtcccccaaaaatcgtataaaac--aaaattattcaatgctataaaa |
16178009 |
T |
|
Q |
105 |
gtttgtcttgtattgttttgtcttgtg |
131 |
Q |
|
|
|||||| ||| ||||| | ||||||| |
|
|
T |
16178010 |
atttgtcgtgtgttgttctatcttgtg |
16178036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 17540775 - 17540676
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaata-caaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||||| |||| |||||||||||||| || |||||||||||||||| ||||| |
|
|
T |
17540775 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa |
17540677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 5278864 - 5278962
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||| ||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
5278864 |
cacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
5278962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30798515 - 30798564
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
T |
30798515 |
acatcacaactttttatcccacgtacaagttatctaaaataccaaaatag |
30798564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 34338870 - 34338772
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||| ||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
34338870 |
cacaactttttgtcccacgcacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
34338772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 38993101 - 38993146
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
T |
38993101 |
cacaactttttgtcccacgtacaagttgtctaaaatacaaaaatag |
38993146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33889307 - 33889259
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
33889307 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
33889259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 2645116 - 2645214
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| ||||||| ||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
2645116 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcc-tcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
2645214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 7258957 - 7258858
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| |||||| |||| ||||||| |||||| || |||||||||||||||| |||||| |
|
|
T |
7258957 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaataacatttttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaa |
7258858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 7761603 - 7761693
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatg |
96 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || ||||||||||||||| |
|
|
T |
7761603 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatg |
7761693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 9717284 - 9717239
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
9717284 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
9717239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 9732960 - 9733058
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| |||||||||||||| || |||||||| ||||||| |||||| |
|
|
T |
9732960 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaa |
9733058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 16104334 - 16104236
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| ||||||||| || ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
16104334 |
cacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
16104236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 19513719 - 19513764
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
19513719 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
19513764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 30326361 - 30326459
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||| | |||||| |
|
|
T |
30326361 |
cacaactttttgtctcacgtacaagttgtctaaaataccaaaatag-tattttgtccctcaaaaatcgtataaaacaaaaaattactcaattccataaaa |
30326459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 35114845 - 35114747
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||| ||||||||||||||||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||| ||| |||||| |
|
|
T |
35114845 |
cacaattttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcattgccataaaa |
35114747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 42706419 - 42706285
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagac-caaaaattactcaatgctat-aa |
102 |
Q |
|
|
|||||||||||||||||| |||||||| ||| |||||| ||||||| |||| |||||||||||||| || |||||||||||||||| || || |
|
|
T |
42706419 |
cacaactttttgtcccacatacaagttgtctaaaataccaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaaattactcaatgccataaa |
42706321 |
T |
|
Q |
103 |
aagtttgtcttgtattgttttgtcttgtgatgtatt |
138 |
Q |
|
|
|| |||||| ||| |||| ||||||||| |||||| |
|
|
T |
42706320 |
aaatttgtcctgtgctgttctgtcttgtgttgtatt |
42706285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 44284689 - 44284591
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| |||||||||||| ||| ||||| ||||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
44284689 |
cacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcatttt-gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
44284591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13829502 - 13829454
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||| ||||||||||||| ||| || |||||| |
|
|
T |
13829502 |
acatcacaactttttgtcccaggtacaagttatctaaaacaccaaaata |
13829454 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26418983 - 26418939
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
T |
26418983 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata |
26418939 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 18685896 - 18685765
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| |||||| |||| |||||||| ||||| || |||||||||||||||| || ||| |
|
|
T |
18685896 |
cacaactttttgtcccacgtacaagttgtctaaaatattaaaata-acattttgtccctcaaaaatcctataaaacaaaaaattactcaatgccataaaa |
18685798 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgtgatgta |
136 |
Q |
|
|
| |||||| ||| |||| ||||||||| |||| |
|
|
T |
18685797 |
aatttgtcctgtgctgttctgtcttgtgttgta |
18685765 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 32766587 - 32766650
Alignment:
Q |
58 |
gtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgtattgtt |
121 |
Q |
|
|
|||| ||||||||||||||| || |||||||| ||||||| |||||| |||||| ||| ||||| |
|
|
T |
32766587 |
gtcctccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgtt |
32766650 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 3913490 - 3913588
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| ||||||||||||||| || ||| |||| ||||||| |||||| |
|
|
T |
3913490 |
cacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgctcc-ccaaaaatcgtataaaacaaaatattattcaatgccataaaa |
3913588 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 1247158 - 1247105
Alignment:
Q |
63 |
ccaaaaatcgtataagaccaaaaattactcaatgctataaaagtttgtcttgta |
116 |
Q |
|
|
||||||||||||||| | |||||||| ||||||| |||||| ||||||||||| |
|
|
T |
1247158 |
ccaaaaatcgtataaaataaaaaattattcaatgccataaaaatttgtcttgta |
1247105 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 6896228 - 6896183
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| || ||||||| |
|
|
T |
6896228 |
cacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag |
6896183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 37308715 - 37308670
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
|||||||||||||||||||||||| || ||| |||||| ||||||| |
|
|
T |
37308715 |
cacaactttttgtcccacgtacaaattgtctaaaataccaaaatag |
37308670 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1247207 - 1247171
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaata |
41 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| |
|
|
T |
1247207 |
cacaactttttgtcccacgtacaagttgtctaaaata |
1247171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 4641518 - 4641478
Alignment:
Q |
64 |
caaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
|||||||||||||| || ||||||||||||||| ||||||| |
|
|
T |
4641518 |
caaaaatcgtataaaacaaaaaattactcaatggtataaaa |
4641478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 37003898 - 37003942
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||||||||||| || ||| |||||| |||||| |
|
|
T |
37003898 |
cacaactttttgtcccacgtacaaattgtctaaaataccaaaata |
37003942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 102013 - 101911
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||||||| || |||||||||||||||| || |
|
|
T |
102013 |
acatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag-cattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccat |
101915 |
T |
|
Q |
101 |
aaaa |
104 |
Q |
|
|
|||| |
|
|
T |
101914 |
aaaa |
101911 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 19126 - 19224
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
19126 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-acattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
19224 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 23635 - 23539
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
23635 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata---acattgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
23539 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 373000 - 373098
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaaa |
104 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||||||||| || |||||||||||||||| |||||| |
|
|
T |
373000 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaata-tcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaa |
373098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0098
Description:
Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 51499 - 51374
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctat-aaa |
103 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||||| ||||||| |||| |||||||||||||| || ||||||||||||||| || ||| |
|
|
T |
51499 |
cacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag-cattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaa |
51401 |
T |
|
Q |
104 |
agtttgtcttgtattgttttgtcttgt |
130 |
Q |
|
|
| |||||||||| |||| |||||||| |
|
|
T |
51400 |
aatttgtcttgtgctgttctgtcttgt |
51374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0208
Description:
Target: scaffold0208; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 2374 - 2419
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
T |
2374 |
cacaactttttgtcccacgtacaagttgtctaaaataccaaaatag |
2419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 15232 - 15135
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatagnnnnnnngtccaccaaaaatcgtataagaccaaaaattactcaatgctataaa |
103 |
Q |
|
|
|||||||||||||| |||||||||||| ||| |||||| ||||||| |||| ||||||||| ||||| || | |||||||||||||| ||||| |
|
|
T |
15232 |
cacaactttttgtctcacgtacaagttgtctaaaatactaaaatag-tattttgtcccccaaaaatcttataaaacaacaaattactcaatgccataaa |
15135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5472 - 5520
Alignment:
Q |
1 |
acatcacaactttttgtcccacgtacaagttatcttaaatacaaaaata |
49 |
Q |
|
|
|||||||||||||||||||||| |||||||| || ||||||||||||| |
|
|
T |
5472 |
acatcacaactttttgtcccacatacaagttgcctaaaatacaaaaata |
5520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0650 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0650
Description:
Target: scaffold0650; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1679 - 1724
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| || ||||||| |
|
|
T |
1679 |
cacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatag |
1724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0360 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0360
Description:
Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15417 - 15462
Alignment:
Q |
5 |
cacaactttttgtcccacgtacaagttatcttaaatacaaaaatag |
50 |
Q |
|
|
||||||||||||||||| ||||||||| ||| |||||| ||||||| |
|
|
T |
15417 |
cacaactttttgtcccatgtacaagttgtctaaaataccaaaatag |
15462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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