View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1390_low_173 (Length: 222)

Name: NF1390_low_173
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1390_low_173
NF1390_low_173
[»] chr7 (34 HSPs)
chr7 (31-170)||(16443333-16443472)
chr7 (31-170)||(16047981-16048120)
chr7 (31-195)||(16511777-16511941)
chr7 (31-195)||(26509037-26509200)
chr7 (31-170)||(10848253-10848392)
chr7 (31-142)||(5154759-5154870)
chr7 (31-195)||(26663240-26663403)
chr7 (31-195)||(26678432-26678595)
chr7 (31-195)||(31083951-31084115)
chr7 (31-195)||(45393864-45394027)
chr7 (31-142)||(2779920-2780031)
chr7 (31-142)||(3451927-3452038)
chr7 (31-142)||(10910278-10910389)
chr7 (31-142)||(2161248-2161358)
chr7 (31-142)||(22148564-22148675)
chr7 (31-142)||(22152791-22152902)
chr7 (31-142)||(22208706-22208817)
chr7 (31-195)||(26519452-26519615)
chr7 (31-142)||(11418131-11418242)
chr7 (31-116)||(31130618-31130704)
chr7 (31-195)||(11447533-11447696)
chr7 (31-142)||(5165060-5165171)
chr7 (31-116)||(4206098-4206183)
chr7 (31-116)||(26441967-26442052)
chr7 (31-174)||(16744848-16744990)
chr7 (31-116)||(26313191-26313277)
chr7 (31-116)||(4138573-4138658)
chr7 (31-116)||(24585864-24585949)
chr7 (31-135)||(31557732-31557837)
chr7 (31-195)||(26268414-26268576)
chr7 (31-142)||(39206492-39206603)
chr7 (31-142)||(45737977-45738088)
chr7 (31-116)||(26596378-26596464)
chr7 (31-110)||(5140665-5140744)
[»] chr1 (15 HSPs)
chr1 (31-170)||(20333862-20334001)
chr1 (31-170)||(20467458-20467597)
chr1 (31-195)||(21891195-21891359)
chr1 (31-170)||(16201476-16201615)
chr1 (31-142)||(14692362-14692473)
chr1 (31-142)||(14695044-14695155)
chr1 (31-142)||(14697728-14697839)
chr1 (31-195)||(51644872-51645035)
chr1 (31-142)||(14700409-14700520)
chr1 (31-142)||(10969345-10969456)
chr1 (31-142)||(41786779-41786890)
chr1 (31-112)||(3647879-3647960)
chr1 (31-142)||(28156407-28156518)
chr1 (31-116)||(10951820-10951905)
chr1 (31-195)||(28591731-28591894)
[»] chr4 (26 HSPs)
chr4 (31-195)||(24585816-24585980)
chr4 (31-170)||(15234500-15234639)
chr4 (31-170)||(1906949-1907088)
chr4 (31-170)||(15379683-15379822)
chr4 (31-142)||(14671699-14671810)
chr4 (31-142)||(14752961-14753072)
chr4 (31-142)||(17019738-17019849)
chr4 (31-164)||(15276071-15276204)
chr4 (31-195)||(5012538-5012701)
chr4 (31-142)||(36323782-36323893)
chr4 (31-142)||(36337991-36338102)
chr4 (36-142)||(6576545-6576651)
chr4 (38-142)||(39857324-39857428)
chr4 (31-195)||(20331880-20332043)
chr4 (31-195)||(54840048-54840211)
chr4 (31-195)||(21976361-21976524)
chr4 (31-195)||(33667246-33667409)
chr4 (31-142)||(24119350-24119461)
chr4 (31-116)||(31119955-31120040)
chr4 (31-195)||(30760421-30760584)
chr4 (31-195)||(40099078-40099241)
chr4 (31-142)||(5701238-5701349)
chr4 (31-150)||(34182402-34182521)
chr4 (31-116)||(27156771-27156856)
chr4 (31-112)||(18794088-18794169)
chr4 (31-195)||(14105201-14105364)
[»] chr2 (39 HSPs)
chr2 (31-170)||(21696622-21696761)
chr2 (31-170)||(27397005-27397144)
chr2 (31-170)||(34268356-34268495)
chr2 (31-195)||(34297795-34297958)
chr2 (25-170)||(19449839-19449985)
chr2 (34-142)||(20844591-20844699)
chr2 (31-195)||(39896715-39896878)
chr2 (31-142)||(28888930-28889041)
chr2 (31-195)||(19409917-19410080)
chr2 (31-142)||(23117472-23117583)
chr2 (31-195)||(3789089-3789252)
chr2 (38-142)||(37384353-37384457)
chr2 (31-195)||(37932023-37932186)
chr2 (31-195)||(9343420-9343583)
chr2 (31-195)||(16168124-16168287)
chr2 (31-195)||(27810349-27810512)
chr2 (31-195)||(37679331-37679494)
chr2 (31-195)||(37694596-37694759)
chr2 (31-142)||(12662166-12662278)
chr2 (31-142)||(27427906-27428018)
chr2 (31-116)||(11628618-11628703)
chr2 (31-195)||(12593460-12593623)
chr2 (31-195)||(21670606-21670769)
chr2 (31-195)||(16822771-16822934)
chr2 (31-195)||(16898546-16898709)
chr2 (31-195)||(34868280-34868443)
chr2 (31-142)||(12710057-12710168)
chr2 (31-195)||(254085-254248)
chr2 (31-116)||(13930044-13930129)
chr2 (31-195)||(37945298-37945461)
chr2 (31-195)||(22921577-22921740)
chr2 (31-195)||(32056398-32056561)
chr2 (31-142)||(31868242-31868353)
chr2 (31-142)||(31882969-31883080)
chr2 (31-142)||(27123198-27123309)
chr2 (31-195)||(39045315-39045479)
chr2 (31-116)||(34161565-34161650)
chr2 (31-112)||(40240251-40240332)
chr2 (31-116)||(27782947-27783032)
[»] chr5 (51 HSPs)
chr5 (31-170)||(22895084-22895223)
chr5 (31-195)||(23898527-23898692)
chr5 (31-142)||(24976529-24976640)
chr5 (31-195)||(25206941-25207105)
chr5 (31-195)||(25271097-25271261)
chr5 (31-138)||(6881002-6881109)
chr5 (31-142)||(9544073-9544184)
chr5 (31-142)||(23726922-23727033)
chr5 (31-142)||(24608930-24609041)
chr5 (31-142)||(37352009-37352120)
chr5 (31-141)||(23632656-23632766)
chr5 (31-139)||(22992486-22992594)
chr5 (31-195)||(37761627-37761790)
chr5 (31-142)||(30941315-30941426)
chr5 (31-140)||(18121779-18121888)
chr5 (31-195)||(15752203-15752366)
chr5 (31-195)||(30036079-30036242)
chr5 (31-142)||(41681390-41681501)
chr5 (31-116)||(37745694-37745779)
chr5 (31-195)||(40466894-40467057)
chr5 (31-195)||(18494113-18494276)
chr5 (31-135)||(28953140-28953244)
chr5 (31-142)||(15652106-15652217)
chr5 (31-125)||(8658838-8658932)
chr5 (31-116)||(31819766-31819851)
chr5 (31-195)||(3796186-3796349)
chr5 (31-195)||(13318171-13318334)
chr5 (31-195)||(33523037-33523200)
chr5 (31-142)||(24730654-24730765)
chr5 (31-142)||(31438142-31438253)
chr5 (31-142)||(33299221-33299332)
chr5 (31-142)||(33784167-33784278)
chr5 (31-195)||(11330287-11330450)
chr5 (31-140)||(11556041-11556150)
chr5 (34-195)||(30175121-30175281)
chr5 (31-116)||(34623230-34623315)
chr5 (31-135)||(12138874-12138978)
chr5 (31-142)||(2517750-2517861)
chr5 (31-110)||(13180162-13180241)
chr5 (1-195)||(43084907-43085101)
chr5 (31-116)||(9324194-9324280)
chr5 (31-116)||(26487104-26487190)
chr5 (31-116)||(33881837-33881922)
chr5 (31-142)||(30158725-30158836)
chr5 (34-116)||(28655976-28656058)
chr5 (31-104)||(5644543-5644616)
chr5 (31-116)||(13436014-13436099)
chr5 (31-116)||(32589620-32589705)
chr5 (33-112)||(18368877-18368956)
chr5 (31-116)||(37664849-37664934)
chr5 (128-195)||(13180232-13180299)
[»] chr6 (43 HSPs)
chr6 (1-195)||(27623081-27623274)
chr6 (31-170)||(22928267-22928406)
chr6 (1-195)||(27283736-27283929)
chr6 (31-142)||(24299173-24299284)
chr6 (31-142)||(16756497-16756608)
chr6 (31-142)||(24870384-24870495)
chr6 (31-142)||(27209575-27209686)
chr6 (31-142)||(27239542-27239653)
chr6 (31-142)||(33369842-33369953)
chr6 (31-142)||(4539171-4539282)
chr6 (31-142)||(14138813-14138924)
chr6 (31-141)||(27031698-27031808)
chr6 (31-195)||(28214092-28214255)
chr6 (31-138)||(29508101-29508208)
chr6 (31-140)||(15405943-15406052)
chr6 (31-140)||(15417730-15417839)
chr6 (31-116)||(27200899-27200984)
chr6 (31-116)||(27248249-27248334)
chr6 (31-142)||(26109813-26109925)
chr6 (31-142)||(27014400-27014511)
chr6 (31-195)||(34457898-34458061)
chr6 (31-116)||(4764464-4764549)
chr6 (31-195)||(30551392-30551555)
chr6 (31-142)||(26792492-26792603)
chr6 (31-142)||(27025818-27025929)
chr6 (31-142)||(29556232-29556343)
chr6 (31-195)||(29579658-29579821)
chr6 (31-195)||(27064125-27064288)
chr6 (31-142)||(13292357-13292469)
chr6 (31-142)||(4531970-4532081)
chr6 (31-142)||(26927428-26927539)
chr6 (31-116)||(13517606-13517691)
chr6 (31-116)||(27355495-27355580)
chr6 (31-195)||(4779535-4779698)
chr6 (31-142)||(28167170-28167281)
chr6 (31-112)||(8899089-8899170)
chr6 (31-112)||(16680865-16680946)
chr6 (31-195)||(26666049-26666212)
chr6 (31-195)||(26772020-26772183)
chr6 (31-108)||(20131229-20131307)
chr6 (31-108)||(22201563-22201641)
chr6 (31-116)||(27491840-27491926)
chr6 (33-112)||(16937420-16937499)
[»] chr3 (58 HSPs)
chr3 (31-195)||(15886226-15886390)
chr3 (31-195)||(4690262-4690426)
chr3 (31-170)||(15367877-15368017)
chr3 (31-195)||(16422794-16422958)
chr3 (31-170)||(16617976-16618116)
chr3 (34-170)||(19701029-19701165)
chr3 (31-142)||(5658774-5658885)
chr3 (31-142)||(11103870-11103981)
chr3 (31-142)||(18285865-18285976)
chr3 (31-142)||(18301166-18301277)
chr3 (31-142)||(31029752-31029863)
chr3 (31-140)||(8282969-8283078)
chr3 (31-142)||(5473629-5473740)
chr3 (31-142)||(18057908-18058019)
chr3 (31-142)||(22381089-22381200)
chr3 (31-142)||(29142263-29142374)
chr3 (31-195)||(10649681-10649843)
chr3 (31-170)||(22041041-22041181)
chr3 (31-195)||(24334786-24334949)
chr3 (31-142)||(4630421-4630532)
chr3 (31-142)||(4728266-4728377)
chr3 (31-142)||(6208535-6208646)
chr3 (31-195)||(6536229-6536392)
chr3 (42-142)||(7079868-7079968)
chr3 (31-142)||(4340185-4340296)
chr3 (31-142)||(15734625-15734736)
chr3 (31-142)||(32445792-32445903)
chr3 (31-142)||(35887400-35887511)
chr3 (31-142)||(4423558-4423669)
chr3 (31-142)||(4790140-4790251)
chr3 (31-116)||(5020399-5020484)
chr3 (31-140)||(18337266-18337375)
chr3 (31-116)||(22864350-22864435)
chr3 (31-116)||(22879409-22879494)
chr3 (31-195)||(29658453-29658616)
chr3 (31-195)||(47030066-47030229)
chr3 (31-195)||(17978437-17978600)
chr3 (31-195)||(18231802-18231965)
chr3 (31-195)||(51788632-51788795)
chr3 (31-116)||(28109449-28109534)
chr3 (31-195)||(5602799-5602962)
chr3 (31-195)||(28345781-28345944)
chr3 (31-195)||(5589842-5590005)
chr3 (31-116)||(5717743-5717828)
chr3 (31-116)||(5728653-5728738)
chr3 (31-116)||(5763630-5763715)
chr3 (31-195)||(32297241-32297404)
chr3 (31-142)||(20072675-20072786)
chr3 (31-142)||(48472572-48472683)
chr3 (31-116)||(16404278-16404363)
chr3 (31-116)||(31957942-31958027)
chr3 (31-195)||(20570342-20570505)
chr3 (31-195)||(21681330-21681493)
chr3 (31-116)||(17970366-17970452)
chr3 (31-112)||(8218317-8218398)
chr3 (31-112)||(10402844-10402925)
chr3 (31-112)||(18249410-18249491)
chr3 (31-116)||(28027959-28028044)
[»] scaffold0109 (1 HSPs)
scaffold0109 (31-170)||(27966-28105)
[»] chr8 (24 HSPs)
chr8 (31-168)||(19694767-19694904)
chr8 (31-170)||(22074336-22074475)
chr8 (31-195)||(19654750-19654914)
chr8 (31-195)||(16260562-16260726)
chr8 (31-195)||(22139538-22139702)
chr8 (31-140)||(14569834-14569943)
chr8 (31-142)||(2130692-2130803)
chr8 (31-142)||(15774251-15774362)
chr8 (31-195)||(12086136-12086299)
chr8 (31-195)||(29835974-29836137)
chr8 (31-142)||(18716159-18716270)
chr8 (31-142)||(19910591-19910702)
chr8 (31-141)||(21341594-21341705)
chr8 (31-142)||(33249040-33249151)
chr8 (31-195)||(28355360-28355523)
chr8 (31-142)||(18797386-18797497)
chr8 (31-142)||(27602337-27602448)
chr8 (31-195)||(19681107-19681270)
chr8 (31-195)||(31483279-31483442)
chr8 (31-195)||(44567631-44567794)
chr8 (31-116)||(33265449-33265534)
chr8 (31-107)||(31361267-31361343)
chr8 (31-116)||(19201791-19201877)
chr8 (31-112)||(9361337-9361417)
[»] scaffold0093 (1 HSPs)
scaffold0093 (31-170)||(444-583)
[»] scaffold0322 (2 HSPs)
scaffold0322 (31-170)||(12722-12862)
scaffold0322 (31-195)||(2305-2468)
[»] scaffold0241 (1 HSPs)
scaffold0241 (31-170)||(26015-26154)
[»] scaffold0240 (1 HSPs)
scaffold0240 (33-142)||(24421-24530)
[»] scaffold0038 (1 HSPs)
scaffold0038 (31-195)||(14590-14753)
[»] scaffold0792 (1 HSPs)
scaffold0792 (31-142)||(4061-4172)
[»] scaffold0143 (2 HSPs)
scaffold0143 (31-142)||(33972-34083)
scaffold0143 (31-195)||(10566-10729)
[»] scaffold0099 (1 HSPs)
scaffold0099 (31-142)||(40067-40180)
[»] scaffold0547 (1 HSPs)
scaffold0547 (31-141)||(9106-9217)
[»] scaffold0237 (1 HSPs)
scaffold0237 (31-142)||(8386-8497)
[»] scaffold0159 (2 HSPs)
scaffold0159 (31-116)||(2622-2707)
scaffold0159 (68-116)||(18534-18582)
[»] scaffold0418 (1 HSPs)
scaffold0418 (31-142)||(12716-12827)
[»] scaffold0336 (1 HSPs)
scaffold0336 (31-112)||(16306-16387)
[»] scaffold0089 (1 HSPs)
scaffold0089 (77-142)||(6742-6807)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 6e-64; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 16443333 - 16443472
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16443333 tcctctttggagataacgtcgttgggagacgtatcggagccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgct 16443432  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  16443433 ggggataatgccgtcattgctgggcatttcagtgctgggt 16443472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 16048120 - 16047981
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  16048120 tcctctttggagataaagtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgtt 16048021  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||| ||||||||| |||||| |||||    
T  16048020 ggggataatgccgtcatcgctgggcatttcagtgttgggt 16047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 16511777 - 16511941
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  16511777 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctact 16511876  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| ||||||| |||||| |||||||||| | | || | ||| |||||||||||||    
T  16511877 gggaataatgccgtcattgccgggcatttcagtgctggatgtatcgtggatgtcgcatctgtggt 16511941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 26509037 - 26509200
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||  |||||| |  ||    
T  26509037 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaatcaacttgctgggggtagaatcttggaagacccgact 26509136  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||||| ||| | | |||||||||| ||||||||||||||||  |||||||||||||||||||    
T  26509137 ggggataacgccgtta-tgctgggcatttcagtgctgggtatgttgtagatatcgcatctgtggt 26509200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 10848392 - 10848253
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| || |||||||||||| |||||||| ||||||||||||    
T  10848392 tcctctttggagataacgtcattgggagacgtatcggaaccatggctgagggcgggttgctacgcgacttgctggggacagaatctcggaagactctgct 10848293  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    || ||||||||| |||| ||||||||| |||||| |||||    
T  10848292 ggagataatgccgtcatcgctgggcatttcagtgttgggt 10848253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 5154870 - 5154759
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  5154870 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 5154771  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  5154770 gggaataatgcc 5154759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 26663240 - 26663403
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  26663240 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac-ctgac 26663338  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  26663339 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 26663403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 26678432 - 26678595
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  26678432 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac-ctgac 26678530  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  26678531 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 26678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 31083951 - 31084115
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgc 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    ||||||  |    
T  31083951 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaaacaacttgcttggggatagaatcttgagagactccac 31084050  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
     ||||| || ||| |   ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  31084051 cggggaaaacgccgt-tgtgctgggcatgtcagcgctgggtatgtcgtagatatcgcatctgtggt 31084115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 45394027 - 45393864
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||    
T  45394027 tcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttact 45393928  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||| ||||||| ||  || | ||||||||||||||    
T  45393927 ggggaaaacgccgt-tgtgctgggcatttcagtcctgggtaagttgtaaacatcgcatctgtggt 45393864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 2780031 - 2779920
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||    
T  2780031 tcctctttgaagatgacgccgttgggagacgtatcggaaccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctact 2779932  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  2779931 gggaataatgcc 2779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 3452038 - 3451927
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  3452038 tcctctttggagatgacgtcgttgggagacgtaccggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 3451939  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  3451938 gggaataatgcc 3451927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 10910278 - 10910389
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||    
T  10910278 tcctctttggagatgacgttgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctact 10910377  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  10910378 gggaataatgcc 10910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 2161358 - 2161248
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| ||    
T  2161358 tcctctttggagacgacgtcgttgggagacgtgtcggaaccatggctgagggca-gtagctatgcaacttgctggggatagaatctcgggagactctact 2161260  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  2161259 gggaataatgcc 2161248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 22148675 - 22148564
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||| ||    
T  22148675 tcctctttggagatgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctact 22148576  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  22148575 gggaataatgcc 22148564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 22152902 - 22152791
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||| ||    
T  22152902 tcctctttggagatgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctact 22152803  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  22152802 gggaataatgcc 22152791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 22208817 - 22208706
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||| ||    
T  22208817 tcctctttggagatgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctact 22208718  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  22208717 gggaataatgcc 22208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 26519615 - 26519452
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  26519615 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 26519516  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  26519515 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 26519452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 11418131 - 11418242
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||    
T  11418131 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctact 11418230  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  11418231 gggaataatgcc 11418242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 31130704 - 31130618
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaacca-tggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31130704 tcctctttggagatgacgtcgttgggagacgtattggaaccaatggctgagggcaggtagctatgcaacttgctggggatagaatct 31130618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 11447696 - 11447533
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  11447696 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 11447597  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||| ||||| ||  |||| || |||||||||||    
T  11447596 ggggaaaacgccgt-tgtgctgggcatttcagtgccgggtacgttgtagacattgcatctgtggt 11447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 5165171 - 5165060
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||    
T  5165171 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctact 5165072  T
Q  131 ggggataatgcc 142  Q
     |||||||||||    
T  5165071 agggataatgcc 5165060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 4206183 - 4206098
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4206183 tcctctttggagatgacgtcgttgggagacgtgccggaaccatggccgagggcaggtaggtatgcaacttgctggggatagaatct 4206098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 26442052 - 26441967
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  26442052 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgcaacttgctggggatagaatct 26441967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 16744848 - 16744990
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  16744848 tcctctttggagatgacgtcgttgggagacgtgacggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 16744946  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgt 174  Q
    |||||| |||||| |   |||||||||| |||| |||||||||||    
T  16744947 tggggaaaatgccgt-tgtgctgggcatttcagcgctgggtatgt 16744990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 26313191 - 26313277
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  26313191 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 26313277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 4138573 - 4138658
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||| ||||||||||    
T  4138573 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggcaggtatgcaacttgctggagatagaatct 4138658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 24585864 - 24585949
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||    
T  24585864 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgaaggcaggtagatatgcaacttgctggagatagaatct 24585949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 31557732 - 31557837
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgc 129  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||  ||||||| | |    
T  31557732 tcctctttggagatggcgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttggaagactttac 31557831  T
Q  130 tgggga 135  Q
    ||||||    
T  31557832 tgggga 31557837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 26268414 - 26268576
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||| | | ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  26268414 tcctctttggagatgacgtcgttgggagacgtttcggaccta-ggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 26268512  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||| ||||||||||  |||| || |||||||||||    
T  26268513 ggggaaaacgccgt-tgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtggt 26268576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 39206492 - 39206603
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| |||||||||||||||||||| |||||||||||  | ||||||| ||    
T  39206492 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctgaggatagaatcttgggagactctact 39206591  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  39206592 ggaaataatgcc 39206603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 45738088 - 45737977
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| ||||||||||||| ||||||||||||||||||  | ||||||| ||    
T  45738088 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaatttgctggggatagaatcttgggagactctact 45737989  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  45737988 ggaaataatgcc 45737977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 26596464 - 26596378
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaacca-tggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||    
T  26596464 tcctctttggagatgacgtcgttgggagacgtgtcggaaccaatagctgagggcaggtagatatgcaacttgctggagatagaatct 26596378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 5140665 - 5140744
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggata 110  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||    
T  5140665 tcctctatggagatgacgtcattgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggata 5140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 20333862 - 20334001
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20333862 tcctctttggagataacgtcgttgggagacgtatcggaaccatggccgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 20333961  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| ||| |||||||||| ||||||||||||    
T  20333962 ggggataatgccatcactgctgggcatttcagtgctgggt 20334001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 20467597 - 20467458
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  20467597 tcctctttggagataacgtcgttgggagacatatcggaaccatggctgagggtaggtagctatgtaacttgctggggatagaatctcggaagactctgct 20467498  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||| ||||||||| |||||| |||||    
T  20467497 ggggataatgccgtcatcgctgggcatttcagtgttgggt 20467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 21891195 - 21891359
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||    
T  21891195 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctact 21891294  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| ||||| | |||||| ||||||| || | | || | ||| |||||||||||||    
T  21891295 gggaataatgccgtcattaccgggcatttcagtgccggatgtatcgtggatgtcgcatctgtggt 21891359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 16201476 - 16201615
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||    
T  16201476 tcctctttggagataacaccgttgggagacgtatcggaaccatgactgagggcaggtagctatgcaacttgctgggggtagaatctcggaagactctact 16201575  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||| | |||||| ||||||| |  |||||||||    
T  16201576 ggggataatgtcgtcattgttgggcatttatgtgctgggt 16201615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 14692362 - 14692473
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  14692362 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctact 14692461  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  14692462 gggaataatgcc 14692473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 14695044 - 14695155
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  14695044 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctact 14695143  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  14695144 gggaataatgcc 14695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 14697728 - 14697839
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  14697728 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctact 14697827  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  14697828 gggaataatgcc 14697839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 51645035 - 51644872
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||    
T  51645035 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttact 51644936  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||| ||||||| ||  |||| || |||||||||||    
T  51644935 ggggaaaacgccgt-tgtgctgggcatttcagtactgggtacgttgtagacattgcatctgtggt 51644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 14700409 - 14700520
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  14700409 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctact 14700508  T
Q  131 ggggataatgcc 142  Q
    ||| ||| ||||    
T  14700509 gggaatactgcc 14700520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 10969456 - 10969345
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    ||||| | ||    
T  10969456 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttact 10969357  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  10969356 ggggataatgcc 10969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 41786779 - 41786890
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||| ||||||||||   |||||| | ||    
T  41786779 tcctctttggagatgacgtcgttgggagacgtatcggaaccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttact 41786878  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  41786879 ggggataatgcc 41786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 3647960 - 3647879
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  3647960 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgtaacttgctggggataga 3647879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 28156518 - 28156407
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||    
T  28156518 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctact 28156419  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  28156418 ggaaataatgcc 28156407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 10951905 - 10951820
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||| ||||||||||    
T  10951905 tcctctttggagatgacgtcgttgggagacgtgtcggaaccacggctgagggcaggtagctaaacaacttgctggagatagaatct 10951820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 28591894 - 28591731
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||| |||||||| |||    ||||||  ||    
T  28591894 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggctggtaggtatgtaacttgctagggatagagtcttgagagactccact 28591795  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||||||||| |||||  |||| || |||||||||||    
T  28591794 ggggaaaacgccgt-tgtgctgggcatttcagtgctggatatgttgtagacattgcatctgtggt 28591731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 9e-60; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 24585816 - 24585980
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||    
T  24585816 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcgggagactctact 24585915  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| ||||||| |||||| ||||||||||||||||  |||||||||||||||||||    
T  24585916 gggaataatgccgtcattgccgggcatttcagtgctgggtatgttgtagatatcgcatctgtggt 24585980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 15234639 - 15234500
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15234639 tcctctttggagataacgtcgttgggagacgtatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgct 15234540  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||| ||||||||| | ||||||||||    
T  15234539 ggggataatgccgtcatcgctgggcattttagtgctgggt 15234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 1907088 - 1906949
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  1907088 tcctctttggagataacgtcattgggagacgtatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctact 1906989  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  1906988 ggggataatgccgtcattgctgggcatttcagtgctgggt 1906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 15379683 - 15379822
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15379683 tcctctttggatataacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgct 15379782  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    || ||||||||| |||| ||||||||| | |||| |||||    
T  15379783 ggagataatgccgtcatcgctgggcattttagtgttgggt 15379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 14671810 - 14671699
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  14671810 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 14671711  T
Q  131 ggggataatgcc 142  Q
     || ||||||||    
T  14671710 aggaataatgcc 14671699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 14752961 - 14753072
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  14752961 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 14753060  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  14753061 gggaataatgcc 14753072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 17019849 - 17019738
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  17019849 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctact 17019750  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  17019749 gggaataatgcc 17019738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 15276071 - 15276204
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||    
T  15276071 tcctctttggagataacgttgttgggagacgtatcggaaccatggctgagggcaggtagctatgcgacttgctggggacagaatctcggaagactccgct 15276170  T
Q  131 ggggataatgccctcattgctgggcatgtcagtg 164  Q
     | |||||| || |||| ||| ||||| ||||||    
T  15276171 agagataataccgtcatcgctaggcatttcagtg 15276204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 5012701 - 5012538
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||    |||| |  ||    
T  5012701 tcctctttggagatgacgtcgttgggagacgtgtcggaaccacggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacccgact 5012602  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||||||  || |   ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  5012601 ggggataacaccat-tgtgctgggcatgtcagcgctgggtatgtcgtagatatcgcatctgtggt 5012538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 36323782 - 36323893
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||    
T  36323782 tcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctact 36323881  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  36323882 gggaataatgcc 36323893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 36337991 - 36338102
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||    
T  36337991 tcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctact 36338090  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  36338091 gggaataatgcc 36338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 6576651 - 6576545
Alignment:
Q  36 tttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 135  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||  |||||||    
T  6576651 tttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaagtatgcaacttgctggggatagaatctcggaagactccactgggga 6576552  T
Q  136 taatgcc 142  Q
    |||||||    
T  6576551 taatgcc 6576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 39857428 - 39857324
Alignment:
Q  38 tggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggata 137  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| | |||    
T  39857428 tggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgagaata 39857329  T
Q  138 atgcc 142  Q
    |||||    
T  39857328 atgcc 39857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 20331880 - 20332043
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  20331880 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 20331978  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  20331979 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 20332043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 54840211 - 54840048
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| |  ||    
T  54840211 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgact 54840112  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  54840111 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 54840048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 21976524 - 21976361
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  21976524 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 21976425  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  21976424 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 21976361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 33667246 - 33667409
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  33667246 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 33667345  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  33667346 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 33667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 24119461 - 24119350
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| || ||||||||||||||||||| |||| ||||||||||  |||| ||||||||||||||||||||||||||| ||||||||| ||    
T  24119461 tcctctttggagatgacatcgttgggagacgtatcgggaccaaggctgagggccagtagatatgcaacttgctggggatagaatctcggaagactctact 24119362  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  24119361 gggaataatgcc 24119350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 31119955 - 31120040
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  31119955 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatct 31120040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 30760584 - 30760421
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  30760584 tcctttttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 30760485  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  30760484 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 30760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 40099078 - 40099241
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    || |||  ||    
T  40099078 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccact 40099177  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  40099178 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 40099241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 5701349 - 5701238
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||  ||||||| | |     
T  5701349 tcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttacc 5701250  T
Q  131 ggggataatgcc 142  Q
    ||||| ||||||    
T  5701249 ggggacaatgcc 5701238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 34182402 - 34182521
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||    
T  34182402 tcctctttggagatgacgtcgttgggagacgtgtcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctact 34182501  T
Q  131 ggggataatgccctcattgc 150  Q
    ||| |||||||| |||||||    
T  34182502 gggaataatgccgtcattgc 34182521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 27156771 - 27156856
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  27156771 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 27156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 18794088 - 18794169
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  18794088 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 18794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 14105364 - 14105201
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||  ||||| |||| ||||||||||||||||| |||    ||||||  ||    
T  14105364 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggtcggtaggtatgtaacttgctggggatagagtcttgagagactccact 14105265  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||||||||| |||||  |||| || |||||||||||    
T  14105264 ggggaaaacgccgt-tgtgctgggcatttcagtgctggatatgttgtagacattgcatctgtggt 14105201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 21696622 - 21696761
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  21696622 tcctctttggagataacgccgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctact 21696721  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  21696722 ggggataatgccgtcattgctgggcatttcagtgctgggt 21696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 27397144 - 27397005
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  27397144 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactccgct 27397045  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||| ||||||||| |||||| |||||    
T  27397044 ggggataatgccgtcatcgctgggcatttcagtgttgggt 27397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 34268356 - 34268495
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  34268356 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 34268455  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||  ||||||| | |||| ||||||||||||    
T  34268456 ggggataatgctgtcattgccgagcatttcagtgctgggt 34268495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 34297958 - 34297795
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  34297958 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 34297859  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| | |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  34297858 gggaaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 34297795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 19449839 - 19449985
Alignment:
Q  25 tagaagtcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaaga 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  19449839 tagaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaaga 19449938  T
Q  124 ctctgctggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    ||| ||||| |||||| || |||| ||||||||| |||||| |||||    
T  19449939 ctccgctggagataataccgtcatcgctgggcatttcagtgttgggt 19449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 142
Target Start/End: Complemental strand, 20844699 - 20844591
Alignment:
Q  34 tctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggg 133  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  20844699 tctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggg 20844600  T
Q  134 gataatgcc 142  Q
     ||||||||    
T  20844599 aataatgcc 20844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 39896878 - 39896715
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| | ||    
T  39896878 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagactttact 39896779  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  | |||||||||||||||||    
T  39896778 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtggatatcgcatctgtggt 39896715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 28889041 - 28888930
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  28889041 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 28888942  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  28888941 gggaataatgcc 28888930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 19409917 - 19410080
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||    
T  19409917 tcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccact 19410016  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  19410017 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 19410080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 23117583 - 23117472
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  23117583 tcctctttggagatgacgtcgttgggaggcgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 23117484  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  23117483 gggaataatgcc 23117472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 3789252 - 3789089
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||    
T  3789252 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgact 3789153  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  3789152 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 3789089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 37384457 - 37384353
Alignment:
Q  38 tggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggata 137  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| | |||    
T  37384457 tggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgagaata 37384358  T
Q  138 atgcc 142  Q
    |||||    
T  37384357 atgcc 37384353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 37932186 - 37932023
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||    
T  37932186 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgact 37932087  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  37932086 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 37932023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 9343420 - 9343583
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  9343420 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 9343518  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  9343519 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 9343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 16168287 - 16168124
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  16168287 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 16168189  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  16168188 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 16168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 27810512 - 27810349
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  27810512 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 27810414  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  27810413 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 27810349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 37679331 - 37679494
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  37679331 tcctctatggagatgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 37679429  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  37679430 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 37679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 37694596 - 37694759
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  37694596 tcctctatggagatgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 37694694  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  37694695 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 37694759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 12662278 - 12662166
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgc 129  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||| |    
T  12662278 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggtatgcaacttgcttgaggatagaatctcggaagactctac 12662179  T
Q  130 tggggataatgcc 142  Q
    |||| ||||||||    
T  12662178 tgggaataatgcc 12662166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 27427906 - 27428018
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgc 129  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| | |    
T  27427906 tcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcttatgcaacttgctggggacagaatctcggaagactatac 27428005  T
Q  130 tggggataatgcc 142  Q
    |||| ||||||||    
T  27428006 tgggaataatgcc 27428018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 11628618 - 11628703
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11628618 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 11628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 12593623 - 12593460
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  12593623 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgcaacttgctggagatagaatcttggaagac-ctgac 12593525  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  12593524 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 12593460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 21670606 - 21670769
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  21670606 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 21670704  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  21670705 tggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 21670769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 16822771 - 16822934
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  16822771 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 16822870  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  16822871 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 16822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 16898709 - 16898546
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  16898709 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 16898610  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  16898609 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 16898546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 34868443 - 34868280
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  34868443 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 34868344  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  34868343 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 34868280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 12710057 - 12710168
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||    ||||| | ||    
T  12710057 tcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttact 12710156  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  12710157 ggggataatgcc 12710168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 254085 - 254248
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||  |||||| ||| |    
T  254085 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatacaacttgctggagatagaatcttggaagac-ctgac 254183  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||| ||| ||||||||||||||||  |||| || |||||||||||    
T  254184 tggggaaaatgccgt-tgtgctggacatttcagtgctgggtatgttgtagacattgcatctgtggt 254248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 13930044 - 13930129
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  13930044 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaaacaacttgctggagatagaatct 13930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 37945298 - 37945461
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| |||||||||||||| || |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  37945298 tcctctttggagatgacgtcgttgggagatgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 37945396  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| |||||| |||||||||  |||| || |||||||||||    
T  37945397 tggggaaaatgccgt-tgtgctgggcatttcagtgttgggtatgttgtagacattgcatctgtggt 37945461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 22921577 - 22921740
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    || |||  ||    
T  22921577 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccact 22921676  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  22921677 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 22921740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 32056561 - 32056398
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  32056561 tcctctttggagatgacgtcgttgggagatgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 32056462  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  32056461 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 32056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 31868242 - 31868353
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||| |||| |||||| ||||||||||||||| ||||||||| ||    
T  31868242 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtaggtatgaaacttgatggggatagaatctcggaagactctact 31868341  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  31868342 gggaataatgcc 31868353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 31883080 - 31882969
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||  ||||||| | |     
T  31883080 tcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttacc 31882981  T
Q  131 ggggataatgcc 142  Q
    ||||| ||||||    
T  31882980 ggggacaatgcc 31882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 27123309 - 27123198
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||    
T  27123309 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctact 27123210  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  27123209 ggaaataatgcc 27123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 39045315 - 39045479
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaac-ttgctggggatagaatctcagaagactctg- 128  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||  |||||| |||     
T  39045315 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaactttgctggagatagaatcttggaagac-ctga 39045413  T
Q  129 ctggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||||| |||||| |   ||||||||||  ||||||||| |||||  |||| || |||||||||||    
T  39045414 ctggggaaaatgccgt-tgtgctgggcattccagtgctggatatgttgtagacattgcatctgtggt 39045479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 34161650 - 34161565
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||| || ||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  34161650 tcctctttggagatgacgtcgttgggagacgtatcagagccaaggctgagggctggtaggtatgcaacttgctggggatagaatct 34161565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 40240332 - 40240251
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  40240332 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 40240251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 27783032 - 27782947
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||| ||||||| | |||||||| |||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  27783032 tcctctatggagatgatgtcgttggtagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagaatct 27782947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 22895223 - 22895084
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||    
T  22895223 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctact 22895124  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||| ||||| |||||| ||||||| ||||||||||||    
T  22895123 ggggatgatgccatcattgttgggcatttcagtgctgggt 22895084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 23898692 - 23898527
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |    
T  23898692 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgcttggggatagaatctcggaagactctac 23898593  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||||||||||| ||||||| |||||| ||||||| |||| |  | | ||| |||||||||||||    
T  23898592 tggggataatgccgtcattgccgggcatttcagtgccgggtgtaccgtggatgtcgcatctgtggt 23898527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 24976640 - 24976529
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  24976640 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctact 24976541  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  24976540 gggaataatgcc 24976529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 25207105 - 25206941
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  25207105 tcctctttggagataacgtcgtcgggagacgtatcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 25207006  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    | |||||||| | ||| ||| |||||| ||| ||| |||| |  | | ||| |||||||||||||    
T  25207005 gaggataatgtcgtcactgccgggcatttcaatgccgggtgtaccgtggatgtcgcatctgtggt 25206941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 25271261 - 25271097
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  25271261 tcctctttggagataacgtcgtcgggagacgtatcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 25271162  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    | |||||||| | ||| ||| |||||| ||| ||| |||| |  | | ||| |||||||||||||    
T  25271161 gaggataatgtcgtcactgccgggcatttcaatgccgggtgtaccgtggatgtcgcatctgtggt 25271097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 6881109 - 6881002
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  6881109 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 6881010  T
Q  131 ggggataa 138  Q
    ||| ||||    
T  6881009 gggaataa 6881002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 9544073 - 9544184
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||    
T  9544073 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctact 9544172  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  9544173 gggaataatgcc 9544184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 23727033 - 23726922
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  23727033 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 23726934  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  23726933 gggaataatgcc 23726922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 24609041 - 24608930
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  24609041 tcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctact 24608942  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  24608941 gggaataatgcc 24608930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 37352009 - 37352120
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | ||    
T  37352009 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttact 37352108  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  37352109 ggggataatgcc 37352120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 23632766 - 23632656
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||    
T  23632766 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctact 23632667  T
Q  131 ggggataatgc 141  Q
    ||| |||||||    
T  23632666 gggaataatgc 23632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 22992486 - 22992594
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  22992486 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 22992585  T
Q  131 ggggataat 139  Q
    ||| |||||    
T  22992586 gggaataat 22992594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 37761790 - 37761627
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||| | ||    
T  37761790 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctgtgcaacttgctggagatagaatcttggaagactttact 37761691  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  37761690 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 37761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 30941426 - 30941315
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||    
T  30941426 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctact 30941327  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  30941326 gggaataatgcc 30941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 18121779 - 18121888
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  18121779 tcctctttggagatgacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 18121878  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  18121879 gggaataatg 18121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 15752203 - 15752366
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||    
T  15752203 tcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgact 15752302  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  15752303 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 15752366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 30036242 - 30036079
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||    
T  30036242 tcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgact 30036143  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  30036142 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 30036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 41681501 - 41681390
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||    
T  41681501 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatgactgagggcaggtaactatgcaacttgctggggatagaatctcggaagactctact 41681402  T
Q  131 ggggataatgcc 142  Q
    | | ||||||||    
T  41681401 gagaataatgcc 41681390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 37745694 - 37745779
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37745694 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaactcgctggggatagaatct 37745779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 40466894 - 40467057
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  40466894 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 40466992  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  40466993 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 40467057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 18494113 - 18494276
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||  | ||||||| |     
T  18494113 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggccagtagctatgcaacttgctggggatagaatcttgggagactctacc 18494212  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   ||||| |||| ||| ||||||||||||  |||| || |||||||||||    
T  18494213 ggggaaaacgccgt-tgtgctgagcatttcaatgctgggtatgttgtagacattgcatctgtggt 18494276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 28953140 - 28953244
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | ||    
T  28953140 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcatcttgctggggacagaatctcggaagactttact 28953239  T
Q  131 gggga 135  Q
    |||||    
T  28953240 gggga 28953244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 15652106 - 15652217
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| | ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  15652106 tcctctttggagatgatgtcgttgggagacgtgtcgaaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 15652205  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  15652206 gggaataatgcc 15652217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 8658838 - 8658932
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagact 125  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  8658838 tcctctttggagatgacgtcgctgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggaaatagaatctcggaagact 8658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 31819766 - 31819851
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  31819766 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatct 31819851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 3796349 - 3796186
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  3796349 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 3796250  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| ||  ||||||||||    
T  3796249 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacatttcatctgtggt 3796186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 13318171 - 13318334
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  13318171 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 13318270  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||||||||||||||||||    
T  13318271 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagatatcgcatctgtggt 13318334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 33523200 - 33523037
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  33523200 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 33523101  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  33523100 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 33523037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 24730765 - 24730654
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||    ||||| | ||    
T  24730765 tcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttact 24730666  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  24730665 ggggataatgcc 24730654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 31438253 - 31438142
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    ||||| | ||    
T  31438253 tcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaagtatgcaacttgctggggatagaatcttgagagactttact 31438154  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  31438153 ggggataatgcc 31438142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 33299332 - 33299221
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||  ||| |||||| |||||||||||||||||||||||||||||| || | ||||||| ||    
T  33299332 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggcggagggccggtagctatgcaacttgctggggatagaatatcgggagactctact 33299233  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  33299232 gggaataatgcc 33299221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 33784278 - 33784167
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||   | ||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||    
T  33784278 tcctctttggagatgacgtcgttgggagacgtatcgggacctaagttgagggccggtagctatgcaacttgctggggatagaatctcgggagactctact 33784179  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  33784178 gggaataatgcc 33784167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 11330450 - 11330287
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||| |||    |||| ||| |    
T  11330450 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagac-ctgac 11330352  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  11330351 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 11330287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 11556150 - 11556041
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||    
T  11556150 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctact 11556051  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  11556050 gggaataatg 11556041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 30175281 - 30175121
Alignment:
Q  34 tctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggg 133  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    || |||  |||||    
T  30175281 tctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggg 30175182  T
Q  134 gataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    || || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  30175181 gaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 30175121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 34623315 - 34623230
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  34623315 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgggggcaggtaggtatgcaacttgctggggatagaatct 34623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 12138978 - 12138874
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  12138978 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 12138879  T
Q  131 gggga 135  Q
    |||||    
T  12138878 gggga 12138874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 2517861 - 2517750
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||| || ||||||||||||||| ||||||||||   |||||| | ||    
T  2517861 tcctctttggagatgacgtcgttgggagacgtaccggagccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttact 2517762  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  2517761 ggggataatgcc 2517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 13180162 - 13180241
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggata 110  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  13180162 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggtatgcaactcgctggggata 13180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 43085101 - 43084907
Alignment:
Q  1 cacgtagtggctcgtgctacat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaact 99  Q
    |||||| |||||||||||| || | | ||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||    
T  43085101 cacgtaatggctcgtgctatattcttggaaatcctctctggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaact 43085002  T
Q  100 tgctggggatagaatctcagaagactctgctggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||||||||||| |||    ||||||  | ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  43085001 tgctggggatagagtcttgagagactccaccggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 43084907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 9324280 - 9324194
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  9324280 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 9324194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 26487190 - 26487104
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  26487190 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 26487104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 33881922 - 33881837
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||| ||||||||||    
T  33881922 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggcaggtagatatgcaacttgctggagatagaatct 33881837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 30158836 - 30158725
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||| |||||| ||||||||  |||||| ||||||||||||||| ||||||||||  |||||||   ||    
T  30158836 tcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgaggataggtaggtatgcaacttgctggagatagaatcttggaagacttgact 30158737  T
Q  131 ggggataatgcc 142  Q
    ||||| ||||||    
T  30158736 ggggaaaatgcc 30158725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 28656058 - 28655976
Alignment:
Q  34 tctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    ||||||||||| |||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||||||||||||||    
T  28656058 tctttggagatgacgtcgttgggagacgtatcggagtcaaggctgagggcaggtaggtatgcaccttgctggggatagaatct 28655976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 5644616 - 5644543
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctg 104  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  5644616 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctg 5644543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 13436014 - 13436099
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||| |||||||||||||| || ||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  13436014 tcctctttggagatgacgtcattgggagacgtatcagagccaaggctgagggctggtaggtatgcaacttgctggggatagaatct 13436099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 32589620 - 32589705
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||    
T  32589620 tcctctttggggatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatacaacttgctggagatagaatct 32589705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 18368877 - 18368956
Alignment:
Q  33 ctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  18368877 ctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 18368956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 37664849 - 37664934
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||  || || ||||||||||||||| ||||||||||    
T  37664849 tcctctttggagatgacgtcgttgggagacgtttcggaaccaaggctgagggtgggcaggtatgcaacttgctggagatagaatct 37664934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 13180232 - 13180299
Alignment:
Q  128 gctggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||||||||||||| |||||| ||||||| ||||||||| |||| |  ||||| | |||||||||||    
T  13180232 gctggggataatgccgtcattgatgggcatttcagtgctgagtatattgtagatgttgcatctgtggt 13180299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 27623081 - 27623274
Alignment:
Q  1 cacgtagtggctcgtgctacatcatagaagtcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaactt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | |||||||||||||||| || ||||||  ||||||    
T  27623081 cacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccagaaccatggctgagggtagatagctaatcaactt 27623180  T
Q  101 gctggggatagaatctcagaagactctgctggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||||||||||||||  |||||| |  |||||||||| ||| | | |||||||||| ||||||||||||||||  |||||||||||||||||||    
T  27623181 gctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgttgtagatatcgcatctgtggt 27623274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 22928267 - 22928406
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  22928267 tcctctttggagataacatcgttgggagatgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 22928366  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
     ||||||||||| || |||| |||||| ||||||| ||||    
T  22928367 agggataatgccgtcgttgccgggcatttcagtgccgggt 22928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 27283736 - 27283929
Alignment:
Q  1 cacgtagtggctcgtgctacatcatagaagtcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaactt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| || ||||||  ||||||    
T  27283736 cacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggtagatagctaatcaactt 27283835  T
Q  101 gctggggatagaatctcagaagactctgctggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
     |||||||||||||    |||||| |  |||||||||| ||| | | |||||||||| ||||||||||||| ||| |||||||||||||| ||||    
T  27283836 actggggatagaattctggaagacccgactggggataacgccgtta-tgctgggcatttcagtgctgggtacgtcgtagatatcgcatctatggt 27283929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 24299173 - 24299284
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  24299173 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 24299272  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  24299273 gggaataatgcc 24299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 16756608 - 16756497
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  16756608 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 16756509  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  16756508 gggaataatgcc 16756497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 24870495 - 24870384
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  24870495 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 24870396  T
Q  131 ggggataatgcc 142  Q
    | | ||||||||    
T  24870395 gagaataatgcc 24870384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 27209686 - 27209575
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  27209686 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 27209587  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  27209586 gggaataatgcc 27209575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 27239542 - 27239653
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  27239542 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 27239641  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  27239642 gggaataatgcc 27239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 33369842 - 33369953
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  33369842 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 33369941  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  33369942 gggaataatgcc 33369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 4539171 - 4539282
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | ||    
T  4539171 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttact 4539270  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  4539271 ggggataatgcc 4539282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 14138813 - 14138924
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||    
T  14138813 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctact 14138912  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  14138913 gggaataatgcc 14138924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 27031808 - 27031698
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||    
T  27031808 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggataggatctcggaagactctact 27031709  T
Q  131 ggggataatgc 141  Q
    ||| |||||||    
T  27031708 gggaataatgc 27031698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 28214255 - 28214092
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || ||||||| |||| || | ||    
T  28214255 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttact 28214156  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| | | |||||||||| ||||||||||||| ||  |||| ||||||||||||||    
T  28214155 ggggaaaacgccgtta-tgctgggcatttcagtgctgggtacgttgtagacatcgcatctgtggt 28214092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 29508208 - 29508101
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||    
T  29508208 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgtaacttgctggggatagaatctcggaagactctact 29508109  T
Q  131 ggggataa 138  Q
    ||| ||||    
T  29508108 gggaataa 29508101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 15405943 - 15406052
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||    
T  15405943 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggaaactctact 15406042  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  15406043 gggaataatg 15406052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 15417730 - 15417839
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||    
T  15417730 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggaaactctact 15417829  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  15417830 gggaataatg 15417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 27200984 - 27200899
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27200984 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 27200899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 27248249 - 27248334
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27248249 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 27248334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 26109813 - 26109925
Alignment:
Q  31 tcctctttggagataacgtcgtt-gggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgc 129  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | |    
T  26109813 tcctctttggagatgacgtcgtttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttac 26109912  T
Q  130 tggggataatgcc 142  Q
    |||||||||||||    
T  26109913 tggggataatgcc 26109925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 27014511 - 27014400
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||| ||    
T  27014511 tcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcgactcgctggggatagaatctcggaagactctact 27014412  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  27014411 gggaataatgcc 27014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 34457898 - 34458061
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||| |||  |||||| ||| |    
T  34457898 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagagtcttggaagac-ctgac 34457996  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| ||||||||||||||    
T  34457997 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacatcgcatctgtggt 34458061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 4764549 - 4764464
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4764549 tcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 4764464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 30551392 - 30551555
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  30551392 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 30551491  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  30551492 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 30551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 26792603 - 26792492
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    ||||| | ||    
T  26792603 tcctctttggagacgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttact 26792504  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  26792503 ggggataatgcc 26792492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 27025929 - 27025818
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||  | ||||||| ||    
T  27025929 tcctctttggagatgacgtcgttgggagacgtatcgggaccaaggctgagggccggtagttatgcaacttgctggggatagaatcttgggagactctact 27025830  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  27025829 gggaataatgcc 27025818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 29556343 - 29556232
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||| |||| |||| ||| |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| ||    
T  29556343 tcctttttgaagatgacgccgttgggagacgtatcggaaccatggctgagggcagataggcatgcaacttgctggggatagaatctcggaagactctact 29556244  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  29556243 gggaataatgcc 29556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 29579821 - 29579658
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||| ||||||||||  |||||| ||| |    
T  29579821 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtgtgcaacttgctggagatagaatcttggaagac-ctgac 29579723  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  29579722 tggggagaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 29579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 27064288 - 27064125
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |  ||||| ||||||||| ||||||||||  |||||| |  ||    
T  27064288 tcctctttggagatgacgtcgttgggagacgtatcagaaccatggctgagggcaggcaagtatgcgacttgctggagatagaatcttggaagacccgact 27064189  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| ||||||||||| ||||| || |||||||||||    
T  27064188 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttatagacattgcatctgtggt 27064125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 13292357 - 13292469
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtag-ctatgcaacttgctggggatagaatctcagaagactctgc 129  Q
    |||||||||||||| ||||||||||| |||||||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||  | ||||||| |    
T  13292357 tcctctttggagatgacgtcgttgggggacgtatcgggaccaaggctgagggccggtagtctatgcaacttgctggggatagaatcttgggagactctac 13292456  T
Q  130 tggggataatgcc 142  Q
    |||| ||||||||    
T  13292457 tgggaataatgcc 13292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 4532081 - 4531970
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||||||||    ||||| | ||    
T  4532081 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggctggtagctatgcaacttgctggggatagaatcttgagagactttact 4531982  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  4531981 ggggataatgcc 4531970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 26927539 - 26927428
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||  || ||||||  ||||| ||||||||||||||||| | ||||||| ||    
T  26927539 tcctctttggagataacgccgttgggagacgtatcggaaccaaggctgaggatagatagctaatcaactcgctggggatagaatctcgggagactctact 26927440  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  26927439 gggaataatgcc 26927428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 13517606 - 13517691
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||| ||||||||||    
T  13517606 tcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggcaggtagatatgcaacttgctggagatagaatct 13517691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 27355495 - 27355580
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||| ||||||| ||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  27355495 tcctctatggagatgacgtcgttgggggacgtatcggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatct 27355580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 4779698 - 4779535
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  4779698 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 4779599  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||| ||| ||  |||| || |||||||||||    
T  4779598 ggggaaaacgccgt-tgtgctgggcatttcagtgctgagtacgttgtagacattgcatctgtggt 4779535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 28167281 - 28167170
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| |     
T  28167281 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctacc 28167182  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  28167181 gggaataatgcc 28167170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 8899089 - 8899170
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  8899089 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 8899170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 16680946 - 16680865
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  16680946 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 16680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 26666049 - 26666212
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||  || || ||||||||||||||| ||||||||||  ||||||| | ||    
T  26666049 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttact 26666148  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  26666149 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 26666212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 26772020 - 26772183
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||  || || ||||||||||||||| ||||||||||  ||||||| | ||    
T  26772020 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttact 26772119  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  26772120 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 26772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 20131307 - 20131229
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggca-ggtagctatgcaacttgctgggga 108  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| |||||||    
T  20131307 tcctctttggagatatcgtcgttgggagacgtatcgaaaccatggctgagggcagggtagttatgcaacttactgggga 20131229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 22201563 - 22201641
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggca-ggtagctatgcaacttgctgggga 108  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| |||||||    
T  22201563 tcctctttggagatatcgtcgttgggagacgtatcgaaaccatggctgagggcagggtagttatgcaacttactgggga 22201641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 27491926 - 27491840
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||  |||||||| ||||||||||||||    
T  27491926 tcctctttggagatgacgtcgttgggagacgtttcgggaccatggctgagggcaggtaggtaaacaacttgcttggggatagaatct 27491840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16937420 - 16937499
Alignment:
Q  33 ctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||  ||||||||||||||||    
T  16937420 ctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtgacttgctggggataga 16937499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 5e-55; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 15886226 - 15886390
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||    
T  15886226 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctact 15886325  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| ||||||| |||||| || ||||||| | | || | ||| |||||||||||||    
T  15886326 gggaataatgccgtcattgccgggcatttctgtgctggatgtatcgtggatgtcgcatctgtggt 15886390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 4690426 - 4690262
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  4690426 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 4690327  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| |||||||||||||| ||||||| || | | || | ||| |||||||||||||    
T  4690326 gggaataatgccgtcattgctgggcatttcagtgccggatgtatcgtggatgtcgcatctgtggt 4690262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 15368017 - 15367877
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgc 129  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  15368017 tcctctttggagataacgtcattgggagacgtatcggaaccatggttgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactctgc 15367918  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    ||||||||||||| |||| ||||||||| |||||| |||||    
T  15367917 tggggataatgccgtcatcgctgggcatttcagtgttgggt 15367877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 16422958 - 16422794
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||| ||    
T  16422958 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgcaggggatagaatctcggaagactctact 16422859  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||||||||| ||||||| ||| ||  |||||| |||| |  | | ||| |||||||||||||    
T  16422858 ggggataatgccgtcattgccgggtattccagtgccgggtgtaccgtggatgtcgcatctgtggt 16422794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 16617976 - 16618116
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgc 129  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||    
T  16617976 tcctctttggagatatcgtcgttgggagacgcatcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgc 16618075  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    ||||||||||||  |||| ||||||||| |||||| |||||    
T  16618076 tggggataatgctgtcatcgctgggcatttcagtgttgggt 16618116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 19701165 - 19701029
Alignment:
Q  34 tctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggg 133  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  19701165 tctttggagataacgccattgggagacgtatcggaaccatgactgagggcaggtagctatacaacttgctggggatagaatctcggaagactctactggg 19701066  T
Q  134 gataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    ||||||||| ||||||| |||| | ||||||| ||||    
T  19701065 gataatgccgtcattgccgggcctttcagtgccgggt 19701029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 5658885 - 5658774
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  5658885 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 5658786  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  5658785 gggaataatgcc 5658774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 11103870 - 11103981
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  11103870 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 11103969  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  11103970 gggaataatgcc 11103981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 18285865 - 18285976
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  18285865 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 18285964  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  18285965 gggaataatgcc 18285976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 18301166 - 18301277
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  18301166 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 18301265  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  18301266 gggaataatgcc 18301277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 31029752 - 31029863
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  31029752 tcctctttggagatgacgtcgttgggagacgtatcggaaccacggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 31029851  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  31029852 gggaataatgcc 31029863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 8282969 - 8283078
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  8282969 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 8283068  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  8283069 gggtataatg 8283078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 5473740 - 5473629
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||    
T  5473740 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctact 5473641  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  5473640 gggaataatgcc 5473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 18058019 - 18057908
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  18058019 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 18057920  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  18057919 gggaataatgcc 18057908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 22381089 - 22381200
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  22381089 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 22381188  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  22381189 gggaataatgcc 22381200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 29142263 - 29142374
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  29142263 tcctcttcggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 29142362  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  29142363 gggaataatgcc 29142374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 10649843 - 10649681
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| | ||    
T  10649843 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagact-tact 10649745  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  10649744 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 10649681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 22041181 - 22041041
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgc 129  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||    
T  22041181 tcctctttggagatatcgtcgttgggagacgcatcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgc 22041082  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    ||| |||||| |  |||| ||||||||| |||||| |||||    
T  22041081 tggagataatacagtcatcgctgggcatttcagtgttgggt 22041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 24334949 - 24334786
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||    
T  24334949 tcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccact 24334850  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  24334849 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 24334786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 4630532 - 4630421
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  4630532 tcctctttggtgatgacgtcgttgggagacgtgtcggaaccatggctgagggcatgtagctatgcaacttgctggggatagaatctcggaagactctact 4630433  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  4630432 gggaataatgcc 4630421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 4728377 - 4728266
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  4728377 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 4728278  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  4728277 gggaataatgcc 4728266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 6208646 - 6208535
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  6208646 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 6208547  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  6208546 gggaataatgcc 6208535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 6536229 - 6536392
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||    
T  6536229 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttact 6536328  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||| ||||||| ||  | || ||||||||||||||    
T  6536329 ggggaaaacgccgt-tgtgctgggcatttcagtactgggtacgttgtggacatcgcatctgtggt 6536392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 7079968 - 7079868
Alignment:
Q  42 gataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgc 141  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  7079968 gataacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgc 7079869  T
Q  142 c 142  Q
    |    
T  7079868 c 7079868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 4340185 - 4340296
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||  | ||||||| ||    
T  4340185 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactctact 4340284  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  4340285 ggggataatgcc 4340296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 15734625 - 15734736
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  15734625 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggttgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 15734724  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  15734725 ggaaataatgcc 15734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 32445903 - 32445792
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  32445903 tcctctttggtgatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 32445804  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  32445803 gggaataatgcc 32445792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 35887511 - 35887400
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||| ||    
T  35887511 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagagtcttgggagactctact 35887412  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  35887411 gggaataatgcc 35887400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 4423669 - 4423558
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    ||||| | ||    
T  4423669 tcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttact 4423570  T
Q  131 ggggataatgcc 142  Q
    ||||||||||||    
T  4423569 ggggataatgcc 4423558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 4790140 - 4790251
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  | ||||||| ||    
T  4790140 tcctcttcggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctact 4790239  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  4790240 gggaataatgcc 4790251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 5020484 - 5020399
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  5020484 tcctctttggagatgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagatatgcaacttgctggggatagaatct 5020399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 18337375 - 18337266
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||  | ||||||| ||    
T  18337375 tcctctttggagatgacgtcgttgggagacgtgtcggaaccctggctgagggcaggtagctacgcaacttgctggggatagaatcttgggagactctact 18337276  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  18337275 gggaataatg 18337266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 22864350 - 22864435
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22864350 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 22864435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 22879409 - 22879494
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22879409 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 22879494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 29658453 - 29658616
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  29658453 tcctctttggagatgacgtcgttgggagacgtgttggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 29658551  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  29658552 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 29658616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 47030229 - 47030066
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaac-ttgctggggatagaatctcagaagactctgc 129  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||  |    
T  47030229 tcctctttgaagatgacgtcgttgggagacgcatcggaaccatggctgagggcaggtagctatgcaactttgctggagatagaatcttggaagactccac 47030130  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  47030129 tggggaaaacgccgt-tgtgctgggcat-tcagtgctgggtatgttgtagacattgcatctgtggt 47030066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 17978437 - 17978600
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  17978437 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 17978536  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  17978537 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 17978600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 18231965 - 18231802
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||| |  |     
T  18231965 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgacc 18231866  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  18231865 ggggaaaacgccgt-tgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtggt 18231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 51788795 - 51788632
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  51788795 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 51788696  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  51788695 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 51788632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 28109449 - 28109534
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  28109449 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaaacaacttgctggagatagaatct 28109534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 5602799 - 5602962
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    || |||  ||    
T  5602799 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccact 5602898  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  5602899 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 5602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 28345944 - 28345781
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    || |||  ||    
T  28345944 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccact 28345845  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  28345844 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 28345781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 5589842 - 5590005
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| | ||||||||||  |||||| ||| |    
T  5589842 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtaggtatgcaacttgctagagatagaatcttggaagac-ctgac 5589940  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |    ||||||||| |||||||||| |||||  |||| || |||||||||||    
T  5589941 tggggaaaatgccgt-tgcgctgggcatttcagtgctggatatgttgtagacattgcatctgtggt 5590005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 5717828 - 5717743
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  5717828 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 5717743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 5728738 - 5728653
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  5728738 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 5728653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 5763630 - 5763715
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  5763630 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 5763715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 32297404 - 32297241
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| ||||| ||||||||||  |||||| ||| |    
T  32297404 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgcaactcgctggagatagaatcttggaagac-ctgac 32297306  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || || ||||||||    
T  32297305 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcctctgtggt 32297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 20072786 - 20072675
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||    
T  20072786 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctact 20072687  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  20072686 ggaaataatgcc 20072675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 48472683 - 48472572
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||    
T  48472683 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctact 48472584  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  48472583 ggaaataatgcc 48472572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 16404278 - 16404363
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||| ||||||| ||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  16404278 tcctctatggagatgacgtcgttgggggacgtatcggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatct 16404363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 31957942 - 31958027
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  31957942 tcctctttggagatgacgttgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 31958027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 20570342 - 20570505
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||| | ||||| |||| |||||||||||||||||||||    ||||||  ||    
T  20570342 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgaggaccggtaggtatgtaacttgctggggatagaatcttgagagactccact 20570441  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||| ||||||||||  |||| || |||||||||||    
T  20570442 ggggaaaacgccgt-tgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtggt 20570505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 21681493 - 21681330
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||| |||    |||||| ||     
T  21681493 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccgcc 21681394  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||| ||||||||||||  |||| || |||||||||||    
T  21681393 ggggaaaacgccgt-tgtgctgggcatttcaatgctgggtatgttgtagacattgcatctgtggt 21681330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 17970366 - 17970452
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  17970366 tcctctttggagatgacgtcgttgggagacatattggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 17970452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 8218398 - 8218317
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||| ||||||    
T  8218398 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggagataga 8218317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 10402925 - 10402844
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| | |||| ||||| |||| |||||||||||||||||    
T  10402925 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgggggccggtaggtatgtaacttgctggggataga 10402844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 18249491 - 18249410
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  18249491 tcctctatggagatgacgtcgttgggggacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 18249410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 28028044 - 28027959
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    ||||||| |||||| ||||||||||||||||| |||| |||  |||||||||| ||||| ||||||||||||||||||||||||||    
T  28028044 tcctcttcggagatgacgtcgttgggagacgtgtcgggacctaggctgagggccggtaggtatgcaacttgctggggatagaatct 28027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 28105 - 27966
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||    
T  28105 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatataacttgctggggatagaatctcggaagactccgct 28006  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| |||| ||||||||| |||||| |||||    
T  28005 ggggataatgccgtcatcgctgggcatttcagtgttgggt 27966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 3e-53; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 19694904 - 19694767
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  19694904 tcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctact 19694805  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgg 168  Q
    ||| |||||||| ||||||| |||||| ||||||||||    
T  19694804 gggaataatgccgtcattgccgggcatttcagtgctgg 19694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 22074336 - 22074475
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22074336 tcctctttggatataacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgct 22074435  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    || ||||||||| |||| ||||||||| | |||| |||||    
T  22074436 ggagataatgccgtcatcgctgggcatttaagtgttgggt 22074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 19654750 - 19654914
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  19654750 tcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctact 19654849  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| ||||| | |||||| ||||||| |||| | || | ||| |||||||||||||    
T  19654850 gggaataatgccgtcattaccgggcatttcagtgccgggtgtatcgtggatgtcgcatctgtggt 19654914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 16260726 - 16260562
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  16260726 tcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctact 16260627  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||| |||||||| ||||| | |||||| ||||||  |||| | || | ||| |||||||||||||    
T  16260626 gggaataatgccgtcattaccgggcatttcagtgtcgggtgtatcgtggatgtcgcatctgtggt 16260562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 22139702 - 22139538
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||    
T  22139702 tcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagctatacaacttgctggggacagaatctcggaagactctact 22139603  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||||||| | ||||| | |||||| ||||||| |||| |  | | ||| |||||||||||||    
T  22139602 ggggataatgtcgtcattaccgggcatttcagtgccgggtgtaccgtggatgtcgcatctgtggt 22139538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 14569943 - 14569834
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||    
T  14569943 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaactcgctggggatagaatctcggaagactctact 14569844  T
Q  131 ggggataatg 140  Q
    ||| ||||||    
T  14569843 gggaataatg 14569834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 2130692 - 2130803
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||    
T  2130692 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctact 2130791  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  2130792 gggaataatgcc 2130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 15774362 - 15774251
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  15774362 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 15774263  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  15774262 gggaataatgcc 15774251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 12086136 - 12086299
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || ||||||| |||| || | ||    
T  12086136 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttact 12086235  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| | | |||||||||| ||||||||||||| ||  |||| ||||||||||||||    
T  12086236 ggggaaaacgccgtta-tgctgggcatttcagtgctgggtacgttgtagacatcgcatctgtggt 12086299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 29836137 - 29835974
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| |  ||    
T  29836137 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgact 29836038  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  29836037 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 29835974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 18716270 - 18716159
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  18716270 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctact 18716171  T
Q  131 ggggataatgcc 142  Q
    ||  ||||||||    
T  18716170 ggaaataatgcc 18716159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 19910591 - 19910702
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | | ||||| ||    
T  19910591 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggaaactctact 19910690  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  19910691 gggaataatgcc 19910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 21341594 - 21341705
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgc 129  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||| |    
T  21341594 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgcttgaggatagaatctcggaagactctac 21341693  T
Q  130 tggggataatgc 141  Q
    |||| |||||||    
T  21341694 tgggaataatgc 21341705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 33249151 - 33249040
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||    
T  33249151 tcctctttggagatgacgtcgttgggagacgtatcgggaccaaggctgagggccggtagctatgcaacttgctggggatagaatcttggaagactctact 33249052  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  33249051 gggaataatgcc 33249040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 28355360 - 28355523
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| |    
T  28355360 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgac 28355458  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| ||||||||||||||||  |||| || |||||||||||    
T  28355459 tggggaaaatgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 28355523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 18797497 - 18797386
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  | ||||| | ||    
T  18797497 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactttact 18797398  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  18797397 gggaataatgcc 18797386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 27602337 - 27602448
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  | ||||||| ||    
T  27602337 tcctctttggagctgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctact 27602436  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  27602437 gggaataatgcc 27602448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 19681270 - 19681107
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  19681270 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 19681171  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||||||||||| ||  |||| || |||||||||||    
T  19681170 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtggt 19681107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 31483279 - 31483442
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||  ||||||| | ||    
T  31483279 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaatttgctggagatagaatcttggaagactttact 31483378  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| ||||| ||||||||||  |||| || |||||||||||    
T  31483379 ggggaaaacgccgt-tgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtggt 31483442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 44567794 - 44567631
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||  |||||||||  ||||||| | ||    
T  44567794 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttact 44567695  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||  |||||||||||  |||| || |||||||||||    
T  44567694 ggggaaaacgccgt-tgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgtggt 44567631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 33265534 - 33265449
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33265534 tcctctttggaaatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 33265449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 31361343 - 31361267
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctgggg 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31361343 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctgggg 31361267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 19201791 - 19201877
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| |||  |||||||| ||||||||||||||    
T  19201791 tcctctttggagatgacgtcgttgggagacgtgtcggaaccacagctgagggcaggtaactaaacaacttgcttggggatagaatct 19201877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 9361417 - 9361337
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||| |||| |||| ||||||||||||    
T  9361417 tcctctttggagatgacgtcgttgggggacgtatcgg-accatagctgagggccggtaggtatgtaactggctggggataga 9361337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 583 - 444
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  583 tcctctttggagataacgtcgttgggagacgtatcagaaccatggttgagggcaggtagctatgcaacctgctggggatagaatctcggaagactctgct 484  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    |||||||||||| | || | ||||||| ||||||||||||    
T  483 ggggataatgccgttatcgttgggcatttcagtgctgggt 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 12862 - 12722
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| || |||||||||||| ||||||||||||    
T  12862 tcctctttggagataacgtcgttgggagacgtatcggaaccacggccgagggcaggtagctatgaaacttgttgcggatagaatctcggaagactctgct 12763  T
Q  131 -ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
     |||||||||||| |||||||||||||| ||||||||||||    
T  12762 gggggataatgccgtcattgctgggcatttcagtgctgggt 12722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 2468 - 2305
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-c 129  Q
    |||||||||||||| |||| |||||||||||| |||||||||  ||||||||||||||| ||| ||||||||||| ||||||||||  |||||| ||| |    
T  2468 tcctctttggagatgacgttgttgggagacgtgtcggaaccaaagctgagggcaggtagatatacaacttgctggagatagaatcttggaagac-ctgac 2370  T
Q  130 tggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    |||||| |||||| |   |||||||||| |||| |||||||||||  |||| || |||||||||||    
T  2369 tggggaaaatgccgt-tgtgctgggcatttcagggctgggtatgttgtagacattgcatctgtggt 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 26015 - 26154
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| |||    
T  26015 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaagcaacttgctggggaaagaatctcggaagactccgct 26114  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggt 170  Q
    || |||||| || |||| ||||||||| |||||| |||||    
T  26115 ggagataataccgtcatcgctgggcatttcagtgttgggt 26154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 24421 - 24530
Alignment:
Q  33 ctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgg 132  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  24421 ctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgg 24520  T
Q  133 ggataatgcc 142  Q
    | ||||||||    
T  24521 gaataatgcc 24530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 14753 - 14590
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || ||||||| |||| || | ||    
T  14753 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttact 14654  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| | | |||||||||| ||||||||||||| ||  |||| ||||||||||||||    
T  14653 ggggaaaacgccgtta-tgctgggcatttcagtgctgggtacgttgtagacatcgcatctgtggt 14590  T

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Target: scaffold0792 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 4061 - 4172
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  4061 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctaagggcaggtagctatgcaacttgctggggatagaatctcgggagactctact 4160  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  4161 gggaataatgcc 4172  T

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Target: scaffold0143 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 34083 - 33972
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||    
T  34083 tcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctact 33984  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  33983 gggaataatgcc 33972  T

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Target: scaffold0143; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 10729 - 10566
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||  |||||||||  ||||||| | ||    
T  10729 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttact 10630  T
Q  131 ggggataatgccctcattgctgggcatgtcagtgctgggtatgtcatagatatcgcatctgtggt 195  Q
    ||||| || ||| |   |||||||||| |||  |||||||||||  |||| || |||||||||||    
T  10629 ggggaaaacgccgt-tgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgtggt 10566  T

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Target: scaffold0099 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 40067 - 40180
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctga-gggcaggtagct-atgcaacttgctggggatagaatctcagaagactctg 128  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||     
T  40067 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgaggggcaggtagttaatgcaacttgctggggatagaatctcggaagactcta 40166  T
Q  129 ctggggataatgcc 142  Q
    ||||| ||||||||    
T  40167 ctgggaataatgcc 40180  T

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Target: scaffold0547 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 9106 - 9217
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgc 129  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||| |    
T  9106 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagccatgcaacttgcttgaggatagaatctcggaagactctac 9205  T
Q  130 tggggataatgc 141  Q
    |||| |||||||    
T  9206 tgggaataatgc 9217  T

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Target: scaffold0237 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 8386 - 8497
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||  ||||||| | |     
T  8386 tcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttacc 8485  T
Q  131 ggggataatgcc 142  Q
    ||||| ||||||    
T  8486 ggggacaatgcc 8497  T

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Target: scaffold0159 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 2622 - 2707
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  2622 tcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 2707  T

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Target: scaffold0159; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 18582 - 18534
Alignment:
Q  68 aaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 116  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  18582 aaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 18534  T

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Target: scaffold0418 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 12827 - 12716
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 130  Q
    |||||||||||||| ||||||||||||||||| |||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||    
T  12827 tcctctttggagatgacgtcgttgggagacgtgtcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctact 12728  T
Q  131 ggggataatgcc 142  Q
    ||| ||||||||    
T  12727 gggaataatgcc 12716  T

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Target: scaffold0336 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 16387 - 16306
Alignment:
Q  31 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||| ||||||||||||    
T  16387 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaactggctggggataga 16306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 6807 - 6742
Alignment:
Q  77 tgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 142  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  6807 tgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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