View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1390_low_23 (Length: 585)

Name: NF1390_low_23
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1390_low_23
NF1390_low_23
[»] chr3 (27 HSPs)
chr3 (30-575)||(41452702-41453226)
chr3 (368-466)||(40982018-40982115)
chr3 (368-440)||(29475810-29475880)
chr3 (386-438)||(36820067-36820119)
chr3 (368-452)||(43308684-43308768)
chr3 (386-441)||(46431766-46431821)
chr3 (295-343)||(659562-659610)
chr3 (380-440)||(39600769-39600829)
chr3 (380-435)||(2340810-2340865)
chr3 (402-461)||(37103048-37103107)
chr3 (368-439)||(40116557-40116628)
chr3 (403-449)||(36304123-36304169)
chr3 (380-437)||(11581578-11581635)
chr3 (380-441)||(21200682-21200743)
chr3 (389-437)||(33307257-33307305)
chr3 (368-452)||(37228204-37228288)
chr3 (296-336)||(42026740-42026780)
chr3 (386-463)||(44443267-44443346)
chr3 (369-452)||(37228051-37228134)
chr3 (368-438)||(20262421-20262491)
chr3 (390-440)||(45289179-45289229)
chr3 (386-439)||(32052607-32052660)
chr3 (380-449)||(37351541-37351610)
chr3 (380-440)||(19162675-19162735)
chr3 (293-361)||(39600860-39600928)
chr3 (296-364)||(45289267-45289335)
chr3 (388-452)||(50101906-50101970)
[»] chr5 (31 HSPs)
chr5 (297-440)||(9235103-9235241)
chr5 (368-437)||(12576951-12577020)
chr5 (403-463)||(28186840-28186900)
chr5 (380-439)||(2713078-2713137)
chr5 (386-457)||(9917521-9917592)
chr5 (386-440)||(14667911-14667965)
chr5 (371-441)||(14749432-14749502)
chr5 (375-441)||(38684609-38684675)
chr5 (380-441)||(27998575-27998636)
chr5 (380-441)||(42199527-42199588)
chr5 (383-440)||(43475377-43475433)
chr5 (368-440)||(7678600-7678672)
chr5 (296-348)||(11675548-11675600)
chr5 (380-440)||(30588581-30588641)
chr5 (380-443)||(2066131-2066194)
chr5 (380-459)||(3775136-3775215)
chr5 (380-439)||(10082834-10082893)
chr5 (380-439)||(33667569-33667628)
chr5 (297-348)||(42199325-42199376)
chr5 (380-439)||(42199420-42199479)
chr5 (386-432)||(13141693-13141739)
chr5 (403-441)||(28005692-28005730)
chr5 (403-441)||(39322153-39322191)
chr5 (295-364)||(4460245-4460314)
chr5 (368-441)||(18698916-18698989)
chr5 (386-439)||(29922424-29922477)
chr5 (298-343)||(33158028-33158073)
chr5 (380-440)||(28016-28076)
chr5 (405-441)||(4460366-4460402)
chr5 (386-438)||(6889133-6889185)
chr5 (368-436)||(36123274-36123342)
[»] chr2 (35 HSPs)
chr2 (368-449)||(9556448-9556529)
chr2 (388-451)||(31254430-31254493)
chr2 (368-437)||(26784431-26784500)
chr2 (368-452)||(18188874-18188958)
chr2 (393-452)||(1626342-1626401)
chr2 (403-466)||(14398013-14398076)
chr2 (380-461)||(12026072-12026153)
chr2 (380-441)||(19235071-19235132)
chr2 (380-436)||(33287555-33287611)
chr2 (368-440)||(38435074-38435146)
chr2 (391-451)||(43832243-43832303)
chr2 (389-468)||(37470186-37470272)
chr2 (387-449)||(37481696-37481758)
chr2 (403-465)||(45640588-45640650)
chr2 (403-452)||(8197617-8197666)
chr2 (403-452)||(8202377-8202426)
chr2 (368-440)||(33504345-33504418)
chr2 (296-364)||(37481793-37481861)
chr2 (300-364)||(45077797-45077861)
chr2 (386-449)||(7431968-7432031)
chr2 (392-443)||(11006853-11006904)
chr2 (386-441)||(19024318-19024373)
chr2 (380-439)||(26670902-26670961)
chr2 (294-348)||(7825396-7825450)
chr2 (386-440)||(21834694-21834748)
chr2 (296-362)||(42149824-42149890)
chr2 (381-439)||(42543370-42543428)
chr2 (381-439)||(44437810-44437868)
chr2 (296-348)||(13240937-13240989)
chr2 (369-441)||(19855585-19855657)
chr2 (391-439)||(23915782-23915830)
chr2 (389-461)||(31744125-31744197)
chr2 (403-439)||(33625287-33625323)
chr2 (381-441)||(42092652-42092712)
chr2 (296-364)||(43260442-43260510)
[»] chr4 (56 HSPs)
chr4 (380-449)||(20999134-20999203)
chr4 (368-463)||(47147495-47147595)
chr4 (368-462)||(55771639-55771733)
chr4 (368-462)||(55835875-55835969)
chr4 (368-441)||(40018276-40018349)
chr4 (403-461)||(7544590-7544648)
chr4 (381-439)||(10209171-10209229)
chr4 (294-348)||(31339572-31339626)
chr4 (368-441)||(934518-934590)
chr4 (392-441)||(20047581-20047630)
chr4 (368-449)||(53540412-53540493)
chr4 (296-364)||(28497527-28497595)
chr4 (368-452)||(45569085-45569169)
chr4 (297-364)||(2589029-2589096)
chr4 (381-440)||(50680875-50680934)
chr4 (371-449)||(8459114-8459192)
chr4 (368-441)||(22420804-22420874)
chr4 (390-440)||(26024938-26024988)
chr4 (294-364)||(29182518-29182588)
chr4 (381-439)||(31961355-31961413)
chr4 (403-440)||(26025007-26025044)
chr4 (368-441)||(42293352-42293425)
chr4 (368-441)||(44384953-44385025)
chr4 (380-441)||(49738637-49738698)
chr4 (368-441)||(54470329-54470402)
chr4 (404-440)||(25574982-25575018)
chr4 (380-440)||(28351693-28351753)
chr4 (369-437)||(30853466-30853534)
chr4 (381-449)||(37488226-37488294)
chr4 (421-461)||(44641834-44641873)
chr4 (390-452)||(21879229-21879292)
chr4 (386-441)||(31403121-31403176)
chr4 (301-364)||(31961442-31961505)
chr4 (394-441)||(37042751-37042798)
chr4 (296-343)||(38903917-38903964)
chr4 (386-465)||(39252365-39252444)
chr4 (386-441)||(42639107-42639162)
chr4 (368-427)||(44860955-44861014)
chr4 (380-462)||(17666109-17666191)
chr4 (380-438)||(26356753-26356811)
chr4 (381-439)||(31897517-31897575)
chr4 (390-452)||(38903794-38903856)
chr4 (408-442)||(44047457-44047491)
chr4 (381-439)||(46372159-46372217)
chr4 (368-441)||(7681997-7682070)
chr4 (386-439)||(21214675-21214728)
chr4 (296-348)||(1380405-1380457)
chr4 (405-441)||(6843774-6843810)
chr4 (380-436)||(8599033-8599089)
chr4 (296-348)||(21214772-21214824)
chr4 (296-348)||(29398856-29398908)
chr4 (296-336)||(45176044-45176084)
chr4 (380-440)||(45204927-45204987)
chr4 (368-440)||(49987530-49987602)
chr4 (296-348)||(54934938-54934990)
chr4 (380-440)||(55809078-55809138)
[»] chr8 (30 HSPs)
chr8 (368-440)||(35643694-35643766)
chr8 (380-443)||(4011217-4011280)
chr8 (386-463)||(24739913-24739990)
chr8 (380-452)||(10079983-10080055)
chr8 (386-440)||(39967587-39967641)
chr8 (380-441)||(16917317-16917378)
chr8 (380-441)||(23023359-23023420)
chr8 (368-440)||(24399877-24399949)
chr8 (380-452)||(38178336-38178408)
chr8 (386-441)||(79167-79222)
chr8 (380-437)||(16351512-16351569)
chr8 (407-452)||(39051303-39051348)
chr8 (368-440)||(30198354-30198426)
chr8 (296-364)||(30559731-30559799)
chr8 (368-440)||(30783130-30783202)
chr8 (386-441)||(39388922-39388978)
chr8 (380-451)||(5908780-5908851)
chr8 (380-443)||(43733341-43733404)
chr8 (380-465)||(10108947-10109039)
chr8 (369-439)||(17491743-17491813)
chr8 (380-433)||(9070122-9070175)
chr8 (380-441)||(27037769-27037830)
chr8 (303-364)||(29520695-29520756)
chr8 (380-449)||(30559827-30559896)
chr8 (386-441)||(1549478-1549530)
chr8 (380-440)||(16994532-16994592)
chr8 (380-440)||(28169526-28169586)
chr8 (380-440)||(38391981-38392041)
chr8 (405-441)||(38483056-38483092)
chr8 (368-436)||(45512587-45512655)
[»] chr7 (31 HSPs)
chr7 (374-441)||(28858173-28858240)
chr7 (380-451)||(45601610-45601681)
chr7 (368-440)||(30664690-30664762)
chr7 (386-449)||(1569156-1569219)
chr7 (387-452)||(29653622-29653687)
chr7 (392-440)||(24549776-24549824)
chr7 (380-440)||(28628021-28628081)
chr7 (368-440)||(32368425-32368497)
chr7 (380-440)||(37976369-37976429)
chr7 (296-348)||(48202894-48202946)
chr7 (296-362)||(6420668-6420734)
chr7 (403-441)||(30144932-30144970)
chr7 (380-441)||(12966150-12966211)
chr7 (368-448)||(7220878-7220958)
chr7 (368-428)||(30814771-30814831)
chr7 (389-441)||(41461242-41461294)
chr7 (296-364)||(47848712-47848780)
chr7 (380-439)||(38135302-38135361)
chr7 (386-449)||(43281971-43282034)
chr7 (368-433)||(22174122-22174187)
chr7 (403-440)||(28542032-28542069)
chr7 (380-441)||(30200051-30200112)
chr7 (380-437)||(40830336-40830393)
chr7 (403-452)||(41483644-41483693)
chr7 (380-449)||(42177097-42177166)
chr7 (296-336)||(19262637-19262677)
chr7 (380-440)||(21517468-21517528)
chr7 (296-364)||(28628109-28628177)
chr7 (296-348)||(35713733-35713785)
chr7 (299-343)||(43791638-43791682)
chr7 (297-365)||(45558401-45558469)
[»] chr6 (13 HSPs)
chr6 (297-440)||(34593-34739)
chr6 (368-452)||(1747717-1747801)
chr6 (403-463)||(1681586-1681646)
chr6 (386-440)||(31831947-31832001)
chr6 (386-439)||(10617323-10617376)
chr6 (294-348)||(306350-306404)
chr6 (386-439)||(38903-38956)
chr6 (387-436)||(8021125-8021174)
chr6 (368-441)||(33997631-33997704)
chr6 (427-460)||(34877968-34878001)
chr6 (380-440)||(9593796-9593856)
chr6 (296-364)||(9593882-9593950)
chr6 (380-440)||(31818665-31818725)
[»] chr1 (34 HSPs)
chr1 (386-465)||(12231505-12231584)
chr1 (380-467)||(40416505-40416599)
chr1 (380-444)||(19969296-19969360)
chr1 (380-439)||(8203223-8203282)
chr1 (367-441)||(30834064-30834138)
chr1 (368-441)||(6025727-6025800)
chr1 (380-441)||(8342968-8343029)
chr1 (380-449)||(29577221-29577290)
chr1 (380-449)||(38869016-38869085)
chr1 (386-441)||(42501248-42501303)
chr1 (388-437)||(3818947-3818996)
chr1 (368-441)||(33560945-33561018)
chr1 (386-463)||(46388516-46388595)
chr1 (386-463)||(46394960-46395039)
chr1 (296-364)||(48431582-48431650)
chr1 (296-343)||(10569264-10569311)
chr1 (297-348)||(19908560-19908611)
chr1 (380-439)||(28528489-28528548)
chr1 (380-439)||(50771645-50771704)
chr1 (403-441)||(12135864-12135902)
chr1 (424-466)||(14225891-14225933)
chr1 (382-448)||(43367710-43367776)
chr1 (368-441)||(853872-853945)
chr1 (403-452)||(4590608-4590657)
chr1 (403-452)||(10584973-10585022)
chr1 (403-452)||(15577575-15577624)
chr1 (368-441)||(44008701-44008774)
chr1 (415-451)||(109070-109106)
chr1 (368-440)||(8796331-8796403)
chr1 (385-441)||(30445250-30445306)
chr1 (380-436)||(32404618-32404674)
chr1 (296-348)||(38868920-38868972)
chr1 (296-348)||(46388414-46388466)
chr1 (380-440)||(52561677-52561737)
[»] scaffold0018 (1 HSPs)
scaffold0018 (380-439)||(178509-178568)
[»] scaffold0325 (1 HSPs)
scaffold0325 (368-435)||(11919-11986)
[»] scaffold0015 (1 HSPs)
scaffold0015 (368-441)||(66659-66732)
[»] scaffold0003 (2 HSPs)
scaffold0003 (296-364)||(346949-347017)
scaffold0003 (386-431)||(346870-346915)
[»] scaffold0373 (1 HSPs)
scaffold0373 (405-441)||(2388-2424)


Alignment Details
Target: chr3 (Bit Score: 372; Significance: 0; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 30 - 575
Target Start/End: Complemental strand, 41453226 - 41452702
Alignment:
Q  30 attcttgggcatgggtctgtactcc---atgtctataattttcatgattcgtttgatatatgtaattcaatttgcatgcttttccttcaggcttggtcag 126  Q
    |||||||||| ||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41453226 attcttgggcttgggtctgtactcctccatgtgtataattttcatgattcgtttgatatatgtaattcaatttccatgcttttccttcaggcttggtcag 41453127  T
Q  127 atgtcagattaacatctcctcaactctccagagaagccttctataaattagctctcaaaaatcttaccatccaaactgtttcctcaaggcacgttttctc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41453126 atgtcagattaacatctcctcaactctccagagaagccttctataaattagcactcaaaaatcttaccatccaaactgtttcctcaaggcacgttttctc 41453027  T
Q  227 atttatctctaatttatttgttccaaattcagttctggatctttaattttacacctcttttattagcaagcttaggtggtttgagcatgttgagagaaaa 326  Q
    |||||||||               |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41453026 atttatctc---------------aaattcagttctggatttttaattttacacctcttttattagcaagcttaggtggtttgagcatgttgcgagaaaa 41452942  T
Q  327 cttgtagattctgtagtgaggaaagcggatcagatggacaatagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagaga 426  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41452941 cttgtagattctgtagtaaggaaagcggatcagattgacaatagaggcaaagcaagacatagaaaaactataagttaaactattaagaaagatctagaga 41452842  T
Q  427 ttaatgagttggataaatatatgatagaacattatggtgtagctgaccgcacttagtgcaataaggcttgnnnnnnnnnnnnnnnnnnnntattagcaag 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    | || |||||    
T  41452841 ttaatgagttggataaatatatgatagaacattatggtgtagctgaccgcacttagtgcaataaggcttg---------gttgttgttgttgttggcaag 41452751  T
Q  527 gcatatagaaagtgtgttaataattggactcttcataccgtgctctctg 575  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41452750 gcatatagaaagtttgttaataattggactcttcataccgtgctctctg 41452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 40982018 - 40982115
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatggtgt 466  Q
    ||||| ||||| ||||| |||||||||||||||   |||||||||| |||||||||| ||||||| |||||||| ||||||||||| ||||||||||||    
T  40982018 tagagacaaaggaagacctagaaaaactataagagtaactattaagaaagatctagatattaatgtgttggatagatatatgatag-acattatggtgt 40982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 29475810 - 29475880
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| || ||||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  29475810 tagaggcagaggaagacctagaaaagctataag--aaactattaagaaagatctagagattaatgagttggat 29475880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 36820119 - 36820067
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgg 438  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  36820119 tagaaaaactataagagaaactattaagaaagatctagagattaatgagttgg 36820067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 43308684 - 43308768
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||| ||||| ||||| ||||||||||| |||  ||||||||||| || |||||||||||||| ||||||||| | ||||||||    
T  43308684 tagagacaaagtaagacctagaaaaactacaagagaaactattaagaaaaatctagagattaatcagttggatagagatatgata 43308768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 46431821 - 46431766
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  46431821 tagaaaaactataagagaaactattaaaaaagatctagagattaatgagttggata 46431766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 659562 - 659610
Alignment:
Q  295 agcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagt 343  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  659562 agcttaggtggtttgggcatgtagagagaaaatttgtagattctgtagt 659610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 39600829 - 39600769
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||||| ||||| ||||| ||||||||||||||    
T  39600829 aagacctagaaaaactataagagaaactattaagaaagatttagaggttaatgagttggat 39600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 435
Target Start/End: Complemental strand, 2340865 - 2340810
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagt 435  Q
    ||||| ||| |||||||||||  ||||||||||| |||||||||||||||||||||    
T  2340865 aagacctaggaaaactataagagaaactattaagaaagatctagagattaatgagt 2340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 37103107 - 37103048
Alignment:
Q  402 taaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattat 461  Q
    |||||||||||| ||||| |||  |||||||||||| ||| |||||||||||||||||||    
T  37103107 taaactattaagaaagatttaggtattaatgagttgaatagatatatgatagaacattat 37103048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 40116628 - 40116557
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| ||||| ||||| |||||||||||||||  ||||||||| |  |||| |||||||||||||||||||    
T  40116628 tagagccaaaggaagacctagaaaaactataagagaaactattaggatagatttagagattaatgagttgga 40116557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 36304123 - 36304169
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||    
T  36304123 aaactattaagaaagatctagagattaatgagttggatcaaaatatg 36304169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 11581578 - 11581635
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    ||||| |||||||||||||||  ||||||||||| |||||||| |||| |||||||||    
T  11581578 aagacctagaaaaactataagagaaactattaagaaagatctatagataaatgagttg 11581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 21200682 - 21200743
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||| ||  |||||||| || |||||||||| ||||||||||||||||    
T  21200682 aagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttggata 21200743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 33307257 - 33307305
Alignment:
Q  389 aaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    ||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  33307257 aaaaactataagggaaaccattaagaaagatctagagattaatgagttg 33307305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 37228204 - 37228288
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||| || ||||| || |||||| |||||  ||||||||||| ||||  |||| ||||| |||||||||||| ||||||||    
T  37228204 tagaggcagagaaagacctataaaaacgataagggaaactattaagaaagacttagaaattaacgagttggataaagatatgata 37228288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 42026780 - 42026740
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagatt 336  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  42026780 gcttaggtggtttgagcttgtagagagaaaacttgtagatt 42026740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 44443346 - 44443267
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg--atagaacattatgg 463  Q
    |||||||||||||||  ||||| ||||| | |||||||||||| ||||||||||||   |||||  ||||||||||||||    
T  44443346 tagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgatatagaacattatgg 44443267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 452
Target Start/End: Original strand, 37228051 - 37228134
Alignment:
Q  369 agaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||| || ||||| || |||||| |||||  ||||||||||| ||||  |||| ||||||||||| |||||| ||||||||    
T  37228051 agaggcagagaaagacctataaaaacgataagggaaactattaagaaagacttagaaattaatgagttagataaagatatgata 37228134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 438
Target Start/End: Complemental strand, 20262491 - 20262421
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgg 438  Q
    |||||||| || |||||  | |||||||||||| ||| |||| ||| ||||||||||||| ||||||||||    
T  20262491 tagaggcagaggaagaccaataaaaactataagataatctatcaagaaagatctagagatcaatgagttgg 20262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 440
Target Start/End: Complemental strand, 45289229 - 45289179
Alignment:
Q  390 aaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||||||  ||||||||| | ||||| ||||||||||||||||||||    
T  45289229 aaaactataagagaaactattaggaaagatttagagattaatgagttggat 45289179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 32052660 - 32052607
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||||||||||| || |||||||||| | ||||| || ||||||||||||||||    
T  32052660 tagaaaaactatgagataaactattaggaaagatttatagattaatgagttgga 32052607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 37351541 - 37351610
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| |||||||||||| ||  |||| || ||| |||||||||||||||||||| |||| ||| |||||    
T  37351541 aagacctagaaaaactattagagaaacaatcaagaaagatctagagattaatgagatggagaaagatatg 37351610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 19162735 - 19162675
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| ||| ||| |||||||  ||||||||| | ||||| ||||||||||||||||||||    
T  19162735 aagacctaggaaatctataagagaaactattaggaaagatttagagattaatgagttggat 19162675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 39600928 - 39600860
Alignment:
Q  293 caagcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagat 361  Q
    ||||||||||||||||  ||||||  |||||| || |||||||||||||| ||||| ||  ||||||||    
T  39600928 caagcttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcagat 39600860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 45289335 - 45289267
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| ||| || ||||||| ||||||||||| |||||| || | ||  |||||||||||    
T  45289335 gcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatgga 45289267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 50101906 - 50101970
Alignment:
Q  388 gaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||||||| | |||| |||||| ||||| | |||| |||||||||||||| | ||||||||    
T  50101906 gaaaaactataactgaaaccattaagaaagatatggagagtaatgagttggatagagatatgata 50101970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 297 - 440
Target Start/End: Original strand, 9235103 - 9235241
Alignment:
Q  297 cttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatggacaatagaggcaaagcaagacatagaaaaacta 396  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||| | || ||  ||||||||   || |||||||| || ||||| |||||||||      
T  9235103 cttaggtgttttgagcatgtagagagaagacttgtagattctgtagtaacgagagtagatcagat---cactagaggcagaggaagacctagaaaaac-- 9235197  T
Q  397 taagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||  ||||||||||| ||||| |||||||||||||| |||||    
T  9235198 taagagaaactattaagaaagatatagagattaatgagctggat 9235241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 368 - 437
Target Start/End: Complemental strand, 12577020 - 12576951
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    |||||||| || ||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  12577020 tagaggcagaggaagacctagaaaaactacaagataaactattaagaaagatctagagattaatgagttg 12576951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 28186900 - 28186840
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatgg 463  Q
    ||||||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  28186900 aaactattaagaaagatttagagattaatgagttggatagagatatgatagaacattatgg 28186840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 2713078 - 2713137
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||||||  ||||||||||| | ||||||||||| |||||||||||    
T  2713078 aagacctagaaaaactataagagaaactattaagaaggatctagagatgaatgagttgga 2713137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 9917592 - 9917521
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaaca 457  Q
    |||||||||||| ||  |||||||| || ||||| ||||||| ||||||||||||| | |||||||||||||    
T  9917592 tagaaaaactattagagaaactatttagaaagatatagagatcaatgagttggatagagatatgatagaaca 9917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 14667911 - 14667965
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||||||||||  || ||| |||| ||||||||||||||||||||||||||    
T  14667911 tagaaaaactataagagaagctactaagaaagatctagagattaatgagttggat 14667965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 14749432 - 14749502
Alignment:
Q  371 aggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| || ||||| |||||||||||||||  ||||||| ||| | |||||||||||||| ||||||||||    
T  14749432 aggcagaggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagttggata 14749502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 441
Target Start/End: Original strand, 38684609 - 38684675
Alignment:
Q  375 aaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||| ||||| ||||||||||| |||  ||||| ||||| ||||||||||||||||| |||||||||    
T  38684609 aaaggaagacctagaaaaactacaagagaaacttttaagaaagatctagagattaattagttggata 38684675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 27998575 - 27998636
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||||||  |||||| |||| |||||||| ||||||||||||| ||||    
T  27998575 aagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttagata 27998636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 42199527 - 42199588
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||| ||  |||||||| || |||||||||| ||||||||||||||||    
T  42199527 aagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttggata 42199588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 43475377 - 43475433
Alignment:
Q  383 acatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||||||| ||||  ||||||||||| |||||| |||||||||||||||||||    
T  43475377 acatagaaaaact-taagagaaactattaagaaagatccagagattaatgagttggat 43475433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 7678600 - 7678672
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| || ||||  ||| ||||| |||||  |||||||| || ||||||||||||||||||||||||||    
T  7678600 tagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggat 7678672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 11675548 - 11675600
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| ||||||||||||||  | ||||||||||||||| ||||    
T  11675548 gcttaggtggtttgggcatgttgagagaaggcctgtagattctgtagtaagga 11675600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 30588581 - 30588641
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||| | ||||| ||||||||||||| ||||||||||||    
T  30588581 aagacctagaaaaactataagagaaattgttaagaaagatctagagatgaatgagttggat 30588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 2066131 - 2066194
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaa 443  Q
    ||||| |||||||| |||||   |||||| |||  |||||||||||||||||||||||||||||    
T  2066131 aagacctagaaaaattataaaagaaactactaaaaaagatctagagattaatgagttggataaa 2066194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 459
Target Start/End: Complemental strand, 3775215 - 3775136
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacatt 459  Q
    ||||| ||||||||||||||| |||||||||||| ||  ||||| |||||||||  ||||||   |||| ||||||||||    
T  3775215 aagacctagaaaaactataagataaactattaagaaaagtctagggattaatgaactggatatggatattatagaacatt 3775136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 10082893 - 10082834
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||||||  |||||| |||  | |||||||||||||||||||||||    
T  10082893 aagacctagaaaaactataagagaaactagtaacaaggatctagagattaatgagttgga 10082834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 33667569 - 33667628
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||||||  ||  ||||||| | |||||||||||||||||||||||    
T  33667569 aagacctagaaaaactataagagaagttattaagaaggatctagagattaatgagttgga 33667628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 42199325 - 42199376
Alignment:
Q  297 cttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    ||||||||||||| |||||| ||||||| || ||||||||||||||| ||||    
T  42199325 cttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaagga 42199376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 42199420 - 42199479
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||| ||  |||||||| || |||||||||| ||||||||||||||    
T  42199420 aagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttgga 42199479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 13141693 - 13141739
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatg 432  Q
    ||||||||||||| |  |||||||||||||||| |||||||||||||    
T  13141693 tagaaaaactatatgggaaactattaaggaagacctagagattaatg 13141739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 28005692 - 28005730
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  28005692 aaactattaagaaagatctagagattaatgagtttgata 28005730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 39322191 - 39322153
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  39322191 aaactattaagaaagatctaaagattaatgagttggata 39322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 4460245 - 4460314
Alignment:
Q  295 agcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||| |||||||| |||||| ||||||| |  ||| ||||||||||| |||||||  |||||||||||    
T  4460245 agcttaagtggtttgggcatgtggagagaagaactgtggattctgtagtaaggaaagttgatcagatgga 4460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 18698916 - 18698989
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || || || |||||||||||||||  ||  ||| ||| ||||||||||||||| |||||||||||    
T  18698916 tagaggcagaggaatacctagaaaaactataagagaatgtatcaagaaagatctagagattagtgagttggata 18698989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 29922424 - 29922477
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||  |||||||    
T  29922424 tagaaaaactataagagaaactattaagaaagatttagagattaacaagttgga 29922477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 33158073 - 33158028
Alignment:
Q  298 ttaggtggtttgagcatgttgagagaaaacttgtagattctgtagt 343  Q
    ||||||||||||| | ||| |||||||||| |||||||||||||||    
T  33158073 ttaggtggtttgaacgtgtagagagaaaacatgtagattctgtagt 33158028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 28016 - 28076
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||| | ||||| ||||| ||||| ||||||||    
T  28016 aagacctagaaaaactataagagaaactattaggaaagatttagaggttaataagttggat 28076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 4460366 - 4460402
Alignment:
Q  405 actattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  4460366 actattaagaaagacctagagattaatgagttggata 4460402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 6889133 - 6889185
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgg 438  Q
    |||||||||||||||  ||||||||| | ||||| ||||||||||| ||||||    
T  6889133 tagaaaaactataagagaaactattaggaaagatttagagattaattagttgg 6889185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 436
Target Start/End: Complemental strand, 36123342 - 36123274
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagtt 436  Q
    |||||| |||| ||||| ||||||| |||||||  |||| || ||| | ||||||||||||||||||||    
T  36123342 tagaggtaaaggaagacttagaaaagctataagggaaaccatcaagaaggatctagagattaatgagtt 36123274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 9556529 - 9556448
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||||||||| ||||| | ||||||||||||| |||||||||||| ||||||||| |||||||||||||||| || |||||    
T  9556529 tagaggcaaaggaagaccttgaaaaactataagataaactattaagaaagatctagtgattaatgagttggatcaagatatg 9556448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 451
Target Start/End: Original strand, 31254430 - 31254493
Alignment:
Q  388 gaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgat 451  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  31254430 gaaaaactgtaagttaaactattaagaaagatctagagattaatgagttgaatagaaatatgat 31254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 437
Target Start/End: Complemental strand, 26784500 - 26784431
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    |||||||| || ||||| |||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  26784500 tagaggcagagaaagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttg 26784431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 18188874 - 18188958
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||||||  |||| |||||||| ||||||  |||||||| || |||||||||||||||||||| |||||| | ||||||||    
T  18188874 tagaggcaaagggagacttagaaaaattataagagaaactattcagaaagatctagagattaatgagctggatagaaatatgata 18188958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 1626342 - 1626401
Alignment:
Q  393 actataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  1626342 actataagagaaactattaagaaagatctagagattaatgagttgtataaaaatatgata 1626401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 14398076 - 14398013
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatggtgt 466  Q
    ||||||||||| ||||||||| |||||||||||||| || | | ||||||||||||||||||||    
T  14398076 aaactattaagaaagatctagtgattaatgagttggttatagacatgatagaacattatggtgt 14398013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 461
Target Start/End: Complemental strand, 12026153 - 12026072
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattat 461  Q
    ||||| |||| |||||||| |  ||||||||||| |||||||||||||||||||||| |||| | |||||||| || |||||    
T  12026153 aagacctagagaaactataggagaaactattaagaaagatctagagattaatgagtttgatagaaatatgataaaatattat 12026072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 19235132 - 19235071
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||||||  |||||||| || ||||||||||||||||||| |||||||    
T  19235132 aagacctagaaaaactataagagaaactattgagaaagatctagagattaatgatttggata 19235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 33287555 - 33287611
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagtt 436  Q
    ||||| |||||||||||||||  ||||||||||| |||||||||| |||||||||||    
T  33287555 aagacctagaaaaactataagagaaactattaagaaagatctagaaattaatgagtt 33287611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 38435074 - 38435146
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| ||  |||| ||||||||||| |||  ||||||||||| |||||||||||||||||| |||||||    
T  38435074 tagaggcagaggtagacctagaaaaactacaagagaaactattaagaaagatctagagattaatgtgttggat 38435146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 43832243 - 43832303
Alignment:
Q  391 aaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgat 451  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||  |||||||    
T  43832243 aaactataagagaaactattaagaaggatctagagattaatgagttggataaggatatgat 43832303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 37470272 - 37470186
Alignment:
Q  389 aaaaactataagttaaactattaaggaagatctagagattaatgagttggat--aaat-----atatgatagaacattatggtgtag 468  Q
    ||||||||||||  ||||||||| |  |||||||||||||||||||||||||  ||||     ||||||||||||||||||||||||    
T  37470272 aaaaactataagagaaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtgtag 37470186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 37481758 - 37481696
Alignment:
Q  387 agaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||||||||| ||  ||||||||||| ||||||||| ||| ||||||||||||||| |||||    
T  37481758 agaaaaactattagagaaactattaagaaagatctagcgataaatgagttggataaaaatatg 37481696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 45640650 - 45640588
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatggtg 465  Q
    ||||||||||| ||||||||||||||||| |||||| |    |||||||||||||||||||||    
T  45640650 aaactattaagaaagatctagagattaataagttgggtgggaatatgatagaacattatggtg 45640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 452
Target Start/End: Complemental strand, 8197666 - 8197617
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||||| |||||||| |||||||||||||||||| | ||||||||    
T  8197666 aaactattaagaaagatctaaagattaatgagttggatagaaatatgata 8197617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 452
Target Start/End: Complemental strand, 8202426 - 8202377
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||||| |||||||| |||||||||||||||||| | ||||||||    
T  8202426 aaactattaagaaagatctaaagattaatgagttggatagaaatatgata 8202377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 33504345 - 33504418
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagaga-ttaatgagttggat 440  Q
    |||||||| || || || |||||||||||||||  ||||||||||| |||||||||||| ||||| ||||||||    
T  33504345 tagaggcagagaaaaacctagaaaaactataagagaaactattaagaaagatctagagatttaataagttggat 33504418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 37481861 - 37481793
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    ||||||||||||||||||||| ||||||| ||||||  ||| |||||| |||| ||  |||||||||||    
T  37481861 gcttaggtggtttgagcatgtagagagaagacttgtgaattttgtagttaggagagtagatcagatgga 37481793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 45077797 - 45077861
Alignment:
Q  300 aggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||  |||||| ||||||||||||||||||| |||||| |||| ||  |||||||||||    
T  45077797 aggtggttttggcatgtagagagaaaacttgtagattttgtagtaaggagagtagatcagatgga 45077861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 7432031 - 7431968
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||||||||||  |  ||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  7432031 tagaaaaactattggagaaactattaagaaggatctagagattaatgagttgaataaaaatatg 7431968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 11006853 - 11006904
Alignment:
Q  392 aactataagttaaactattaaggaagatctagagattaatgagttggataaa 443  Q
    |||||||||  ||||||||||| |||| ||||||||||||| ||||||||||    
T  11006853 aactataagagaaactattaagaaagacctagagattaatgggttggataaa 11006904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 19024318 - 19024373
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| ||| |||||  ||||||||||| |||||||| ||||||||||||||||||    
T  19024318 tagaagaaccataagagaaactattaagaaagatctaaagattaatgagttggata 19024373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 26670902 - 26670961
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| || |||||||||||   ||||||||||| ||||| |||||||||||||||||||    
T  26670902 aagacctacaaaaactataaaagaaactattaagaaagatttagagattaatgagttgga 26670961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 7825396 - 7825450
Alignment:
Q  294 aagcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||| |||||||||||||| ||||||| || |||||||||| |||| ||||    
T  7825396 aagcttagttggtttgagcatgtagagagaagacatgtagattctatagtcagga 7825450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 21834694 - 21834748
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||||||||| |||||||||| | || || || |||||||||||||||||    
T  21834694 tagaaaaactataagataaactattaggaaatatttatagattaatgagttggat 21834748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 42149890 - 42149824
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatg 362  Q
    |||||||||||||||| |||| |||||||| | | ||||||||||||| |||| ||  |||||||||    
T  42149890 gcttaggtggtttgagtatgtagagagaaatcctatagattctgtagtaaggagagtagatcagatg 42149824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 42543370 - 42543428
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||| |||||||||||||||  ||||||||| | | ||||||||||| |||||||||||    
T  42543370 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 42543428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 439
Target Start/End: Complemental strand, 44437868 - 44437810
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||| ||||||||||||| |  ||||||||||| | ||||||||||| |||||||||||    
T  44437868 agacctagaaaaactatatgagaaactattaagaaggatctagagataaatgagttgga 44437810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 13240989 - 13240937
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| |||||| ||||||| || |||||||||| |||| ||||    
T  13240989 gcttaggtggtttgggcatgtagagagaagacatgtagattctttagtaagga 13240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 19855585 - 19855657
Alignment:
Q  369 agaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||| || ||||| |||| |||||||||   ||||||||||| |||||| |||| |||||||| ||||||    
T  19855585 agaggcagaggaagacctagataaactataaaagaaactattaagaaagatccagaggttaatgagctggata 19855657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 23915830 - 23915782
Alignment:
Q  391 aaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||||||||  ||||||||||| || ||||||||||||||||| ||||    
T  23915830 aaactataagagaaactattaagaaaaatctagagattaatgaggtgga 23915782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 461
Target Start/End: Original strand, 31744125 - 31744197
Alignment:
Q  389 aaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattat 461  Q
    |||||||||||| | ||||||||   | ||| |||||||||| ||||| ||||||||||| ||| ||||||||    
T  31744125 aaaaactataagattaactattacaaaggatttagagattaacgagttagataaatatataatacaacattat 31744197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 439
Target Start/End: Complemental strand, 33625323 - 33625287
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||||||||| || ||||||||||||||||||||||    
T  33625323 aaactattaagaaatatctagagattaatgagttgga 33625287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 42092652 - 42092712
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||| ||||||||||||| |  ||||||||||  ||||| ||||||||||| |||||||||    
T  42092652 agacctagaaaaactataggagaaactattaaaaaagatgtagagattaattagttggata 42092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 43260442 - 43260510
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| ||||||  ||| || ||||||||||||| |||| |||| ||  |||||||||||    
T  43260442 gcttaggtggtttgggcatgtgaagaaaagacttgtagattctatagtaaggagagtagatcagatgga 43260510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 20999134 - 20999203
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  20999134 aagacctagaaaaactataatataaactattaagaaagatctagagtttaatgagttgaataaatatatg 20999203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 463
Target Start/End: Original strand, 47147495 - 47147595
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata-----aatatatgatagaacattatg 462  Q
    |||||||| || ||||| |||||||||||||    ||||||||||| |||||||||||||||||||||||||||      ||||||||||||||||||||    
T  47147495 tagaggcagaggaagacctagaaaaactatagaagaaactattaagaaagatctagagattaatgagttggatagatatgatatatgatagaacattatg 47147594  T
Q  463 g 463  Q
    |    
T  47147595 g 47147595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 462
Target Start/End: Original strand, 55771639 - 55771733
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatg 462  Q
    ||||||||||| ||||  || ||||||||||||| |||||  |||||||||||||||||||||||||||| ||| |  | ||||| |||||||||    
T  55771639 tagaggcaaaggaagatttaaaaaaactataagtgaaacttgtaaggaagatctagagattaatgagttgcatagaactgtgatataacattatg 55771733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 462
Target Start/End: Original strand, 55835875 - 55835969
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatg 462  Q
    ||||||||||| ||||  || ||||||||||||| |||||  |||||||||||||||||||||||||||| ||| |  | ||||| |||||||||    
T  55835875 tagaggcaaaggaagatttaaaaaaactataagtgaaacttgtaaggaagatctagagattaatgagttgcatagaactgtgatataacattatg 55835969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 40018349 - 40018276
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||  ||||| |||||||||||||||  ||||| ||||| ||||||||||||| |||||||||||||    
T  40018349 tagaggcaaataaagacttagaaaaactataagaaaaactgttaagaaagatctagagatcaatgagttggata 40018276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 7544648 - 7544590
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattat 461  Q
    ||||||||||| |||||||||||||||||||||| |||  | |||||||||||||||||    
T  7544648 aaactattaagaaagatctagagattaatgagtttgatcgaaatatgatagaacattat 7544590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 10209171 - 10209229
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||| |||||||||||||||  ||||||||||| | |||||||||||||||||||||||    
T  10209171 agacctagaaaaactataagagaaactattaagaaggatctagagattaatgagttgga 10209229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 31339572 - 31339626
Alignment:
Q  294 aagcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  31339572 aagcttaggtggtttgagcatgtagagagaagacttgtagattatgtagtaagga 31339626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 934590 - 934518
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| |||||||||||| ||  ||||||||||| ||| |||||||||||||||||||||||    
T  934590 tagaggcagaggaagac-tagaaaaactattagagaaactattaagaaagttctagagattaatgagttggata 934518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 441
Target Start/End: Original strand, 20047581 - 20047630
Alignment:
Q  392 aactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  20047581 aactataagagaaactattaaagaagatctagagattaatgagttggata 20047630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 53540412 - 53540493
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    |||||||| || ||||| ||||||||||||||| |||||||||| | ||||  | ||||||||||||||||| ||| |||||    
T  53540412 tagaggcagaggaagacctagaaaaactataagataaactattaggaaagacttggagattaatgagttggacaaaaatatg 53540493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 28497527 - 28497595
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| |||||| ||||||| ||||||||||| |||||| |||| ||  |||||||||||    
T  28497527 gcttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggagagtagatcagatgga 28497595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 452
Target Start/End: Complemental strand, 45569169 - 45569085
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||| || ||||| |||||| | ||||||  ||||||||||| || |||||||||| ||||||||||||| | ||||||||    
T  45569169 tagaggcagaggaagacctagaaacattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 45569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 2589029 - 2589096
Alignment:
Q  297 cttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    ||||||||||||  |||||| |||||||||||||| ||||||||||| |||| ||  |||||||||||    
T  2589029 cttaggtggtttaggcatgtagagagaaaacttgtggattctgtagttaggagagtagatcagatgga 2589096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 440
Target Start/End: Original strand, 50680875 - 50680934
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||| |||||||||||||||  ||| |||| || ||||||||||||||||||||||||||    
T  50680875 agacctagaaaaactataagagaaattatttagaaagatctagagattaatgagttggat 50680934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 8459192 - 8459114
Alignment:
Q  371 aggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| || ||||| || |||||||| ||| |||||||||||| || ||||||||||||| |||||| || ||||||||    
T  8459192 aggcagaggaagacctaaaaaaactaaaagataaactattaagaaaaatctagagattaaagagttgaatgaatatatg 8459114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 22420874 - 22420804
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||| | ||||  |||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||    
T  22420874 tagaggcaagggaagatttagaaaaactataag--aaactat-aagaaagatctagagattaatgagttggata 22420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 440
Target Start/End: Complemental strand, 26024988 - 26024938
Alignment:
Q  390 aaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  26024988 aaaactatatgagaaactattaagaaagatctagagattaatgagttggat 26024938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 29182518 - 29182588
Alignment:
Q  294 aagcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||||  |||||| ||||||||||  ||||||||||| || |||||||| ||||| |||||    
T  29182518 aagcttaggtggtttaggcatgtagagagaaaaccggtagattctgtggtaaggaaagcagatcatatgga 29182588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 439
Target Start/End: Complemental strand, 31961413 - 31961355
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||| |||||||||||||||  ||||||||| | ||||||||||||| |||||||||||    
T  31961413 agacctagaaaaactataagagaaactattaggaaagatctagagataaatgagttgga 31961355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 26025044 - 26025007
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26025044 aaactattaagaaagatctagagattaatgagttggat 26025007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 42293425 - 42293352
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||| | ||  || ||||||||||||  ||||||||||| |||||||||| ||||||||||| ||||    
T  42293425 tagaggcaaaggatgaactaaaaaaactataagagaaactattaagaaagatctagaaattaatgagttagata 42293352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 44384953 - 44385025
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| ||||| |||||||||| || |||||||  || |||||||| ||||||||||||||||| |||||||||    
T  44384953 tagagacaaagaaagacatagacaagctataagagaa-ctattaagaaagatctagagattaataagttggata 44385025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 49738698 - 49738637
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| ||||||||||||||   ||||||||||| | |||||||| ||||||||||||||||    
T  49738698 aagacctagaaaaactataataaaaactattaagaaggatctagaaattaatgagttggata 49738637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 54470329 - 54470402
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||  |||||  ||||||||||||||  || |||||||  ||| |||||||||||||||||||||||    
T  54470329 tagaggcaaaagaagaccaagaaaaactataagagaatctattaataaagttctagagattaatgagttggata 54470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 25574982 - 25575018
Alignment:
Q  404 aactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25574982 aactattaagaaagatctagagattaatgagttggat 25575018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 28351693 - 28351753
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||| | ||||| ||||||||| ||||||||||    
T  28351693 aagacctagaaaaactataagagaaactattacgaaagatttagagattattgagttggat 28351753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 437
Target Start/End: Original strand, 30853466 - 30853534
Alignment:
Q  369 agaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    ||||||||||  |||| |||||||||||||||  ||||||||| | || ||||| ||||||||||||||    
T  30853466 agaggcaaagggagacttagaaaaactataagagaaactattatgaaaaatctaaagattaatgagttg 30853534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 37488226 - 37488294
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    |||| |||||||||||||||  ||||||||||| |||||||||| |||||| |||| ||| || |||||    
T  37488226 agacctagaaaaactataagagaaactattaagaaagatctagaaattaataagtttgatcaaaatatg 37488294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 44641873 - 44641834
Alignment:
Q  421 tagagattaatgagttggataaatatatgatagaacattat 461  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44641873 tagagattaatgagttggat-aatatatgatagaacattat 44641834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 21879292 - 21879229
Alignment:
Q  390 aaaactataagttaaactatt-aaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||||||  |||||||| ||| ||||||||||||| ||||||||||||| | ||||||||    
T  21879292 aaaactataagagaaactattcaagaaagatctagagatgaatgagttggatagagatatgata 21879229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 31403176 - 31403121
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||| ||||||||||  ||||||||| | ||||||||||||||||| |||||||||    
T  31403176 tagagaaactataagaaaaactattatgaaagatctagagattaattagttggata 31403121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 31961505 - 31961442
Alignment:
Q  301 ggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||| |||| || |||| |||||||    
T  31961505 ggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatgga 31961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 37042798 - 37042751
Alignment:
Q  394 ctataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  37042798 ctataagagaaactattaagaaagatctagagattattgagttggata 37042751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 38903964 - 38903917
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagt 343  Q
    |||||| |||||||||||||| ||||||| ||||||||||| ||||||    
T  38903964 gcttagttggtttgagcatgtggagagaagacttgtagattttgtagt 38903917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 39252444 - 39252365
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatggtg 465  Q
    |||| |||||||||| |||||||||||  || || || |||||||||| |||| || | |||||||||||||||| ||||    
T  39252444 tagagaaactataagataaactattaaaaaatatatatagattaatgacttgggtagagatatgatagaacattagggtg 39252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 42639162 - 42639107
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||  |||  ||||||||||| ||||||||| |||||||||||||||||    
T  42639162 tagaaaaactgcaagagaaactattaagaaagatctagcgattaatgagttggata 42639107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 44860955 - 44861014
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagat 427  Q
    ||||||||||| ||||| | |||||||||||||  ||||||||| | |||||||||||||    
T  44860955 tagaggcaaaggaagaccttgaaaaactataagggaaactattatgaaagatctagagat 44861014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 17666191 - 17666109
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatg 462  Q
    ||||| |||||||| ||||||  |||||||||   ||||| || ||||||||||||| ||| || ||||||||||||| ||||    
T  17666191 aagacttagaaaaaatataagagaaactattagaaaagatttatagattaatgagttagatgaaaatatgatagaacaatatg 17666109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 438
Target Start/End: Original strand, 26356753 - 26356811
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgg 438  Q
    ||||| |||||||||||||||  ||||| ||| | | ||||||||||||||||||||||    
T  26356753 aagacctagaaaaactataagagaaactgttatgaaggatctagagattaatgagttgg 26356811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 439
Target Start/End: Complemental strand, 31897575 - 31897517
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||| |||||||||||||||  ||||||||| | | ||||||||||| |||||||||||    
T  31897575 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 31897517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 38903856 - 38903794
Alignment:
Q  390 aaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||||||  ||||||||||| |||| ||| ||||||||||||| |||| | ||||||||    
T  38903856 aaaactataagagaaactattaagaaagacctaaagattaatgagtttgatagagatatgata 38903794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 442
Target Start/End: Complemental strand, 44047491 - 44047457
Alignment:
Q  408 attaaggaagatctagagattaatgagttggataa 442  Q
    |||||| ||||||||||||||||||||||||||||    
T  44047491 attaagaaagatctagagattaatgagttggataa 44047457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 46372159 - 46372217
Alignment:
Q  381 agacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||| |||||||||||||||  ||||||||| | | ||||||||||| |||||||||||    
T  46372159 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 46372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 7682070 - 7681997
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| | |||||||||||||  ||||||| ||| || ||||| ||||||||||||| ||||    
T  7682070 tagaggcagaggaagacctggaaaaactataagagaaactatcaagaaaaatctatagattaatgagttagata 7681997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 21214728 - 21214675
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||||||||||||||  ||||||||||| ||| |||| ||| ||||||||||||    
T  21214728 tagaaaaactataagagaaactattaagaaaggtctatagagtaatgagttgga 21214675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 1380405 - 1380457
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| ||| || |||||||||| |||||||| |||||| ||||    
T  1380405 gcttaggtggtttgggcacgtagagagaaaacctgtagattttgtagtaagga 1380457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 6843774 - 6843810
Alignment:
Q  405 actattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  6843774 actattaagaaagatctagagattaatgagtttgata 6843810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 8599089 - 8599033
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagtt 436  Q
    ||||| |||||||||||||||  ||||||||||| |||||||| |  ||||||||||    
T  8599089 aagacctagaaaaactataagagaaactattaagaaagatctaaatgttaatgagtt 8599033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 21214824 - 21214772
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| |||||| ||||||| ||||||  |||||||||| ||||    
T  21214824 gcttaggtggtttgggcatgtagagagaagacttgttaattctgtagtaagga 21214772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 29398856 - 29398908
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    ||||| |||||||| |||||| ||||||| || | ||||||||||||||||||    
T  29398856 gcttatgtggtttgggcatgtagagagaagacctatagattctgtagtgagga 29398908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 45176044 - 45176084
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagatt 336  Q
    |||||||||||||| |||||| ||||||| |||||||||||    
T  45176044 gcttaggtggtttgggcatgtagagagaagacttgtagatt 45176084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 45204987 - 45204927
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||| | ||||| ||||| ||||| ||||||||    
T  45204987 aagacctagaaaaactataagagaaactattaggaaagatttagagtttaataagttggat 45204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 49987530 - 49987602
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| || ||||| |||||||||||||||  ||||||||||| ||||  | ||||| |||||| |||||    
T  49987530 tagaggcagaggaagacctagaaaaactataagagaaactattaagaaagacttggagataaatgagatggat 49987602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 54934938 - 54934990
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||| ||||||||  |||| ||||||| |||| ||||||||||||||||||    
T  54934938 gcttagatggtttgaatatgtagagagaagacttttagattctgtagtgagga 54934990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 55809138 - 55809078
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||| ||| | ||||| ||||| ||||||||||||||    
T  55809138 aagacctagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggat 55809078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 35643766 - 35643694
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| || ||||| |||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||    
T  35643766 tagaggcagaggaagacctagaaaaactataagagaaattattaagaaagatctagagattaatgagttggat 35643694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 4011217 - 4011280
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaa 443  Q
    ||||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||    
T  4011217 aagacctagaaaaactataagagaaactattaagaaagatctaaagattaatgagttggataaa 4011280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 24739990 - 24739913
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatgg 463  Q
    |||||||| ||||||  |||||||| || ||||| ||||||||||| ||||||||| | |||||||||||||||||||    
T  24739990 tagaaaaattataagagaaactattgagaaagatgtagagattaatcagttggatagagatatgatagaacattatgg 24739913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 10080055 - 10079983
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||| |||| ||||||||||  ||||| ||||| ||||||||||||||||||||||||||| | ||||||||    
T  10080055 aagacctagagaaactataagaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgata 10079983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 39967641 - 39967587
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||||||||||  ||||||||||| ||||||||| ||||||||||||||||    
T  39967641 tagaaaaactataagagaaactattaagaaagatctagcgattaatgagttggat 39967587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 16917317 - 16917378
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| ||||||| ||||| || ||||||| ||||||||| |||||||||||||||||||||    
T  16917317 aagacctagaaaagctataggtgaaactatcaaggaagatttagagattaatgagttggata 16917378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 23023359 - 23023420
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||||||  |||||| |||| |||||||| ||||||||||||||||||    
T  23023359 aagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttggata 23023420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 24399949 - 24399877
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| ||||| || |||||||| ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  24399949 tagaggcagagcaaaacttagaaaaattataagagaaactattaagaaggatctcgagattaatgagttggat 24399877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 38178408 - 38178336
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||| |||||||||||||||  ||||||||||  |||| ||||| |||||||||||||||| | ||||||||    
T  38178408 aagacctagaaaaactataagagaaactattaacaaagacctagacattaatgagttggatagagatatgata 38178336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 79167 - 79222
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||| ||||||||  ||||||||||| |||||||||||||||||||| ||||||    
T  79167 tagaaacactataagagaaactattaagaaagatctagagattaatgagctggata 79222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 16351512 - 16351569
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    ||||| |||||||||||| ||  ||||||||||| | |||||||||||||||||||||    
T  16351512 aagacctagaaaaactattagagaaactattaagaaggatctagagattaatgagttg 16351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 452
Target Start/End: Original strand, 39051303 - 39051348
Alignment:
Q  407 tattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||    
T  39051303 tattaaggaggatctagatattcatgagttggataaatatatgata 39051348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 30198426 - 30198354
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| ||  |||| |||||||||||||||  ||| ||||||| ||||| | ||||||||||||||||||    
T  30198426 tagaggcagaggtagacttagaaaaactataagagaaattattaagaaagatattgagattaatgagttggat 30198354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 30559731 - 30559799
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| |||| | ||||||| || |||||||| |||||| |||| || ||||||||||||    
T  30559731 gcttaggtggtttgggcatttagagagaagacatgtagattttgtagtaaggacagtggatcagatgga 30559799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 30783202 - 30783130
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| || ||||  ||| ||||| |||||  |||||||| || ||||||||||||||||||||||||||    
T  30783202 tagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggat 30783130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 39388922 - 39388978
Alignment:
Q  386 tagaaaaactataa-gttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||||||||| |  ||||||||| | |||||||||||||||||||||||||||    
T  39388922 tagaaaaactataaagagaaactattaggaaagatctagagattaatgagttggata 39388978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 5908780 - 5908851
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgat 451  Q
    ||||| |||||||||||||||  ||||||||||  |||||| |  |||||||||||||||| || |||||||    
T  5908780 aagacctagaaaaactataagagaaactattaaaaaagatccaaggattaatgagttggatcaaaatatgat 5908851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 43733341 - 43733404
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaa 443  Q
    ||||| ||||||||||| |||  |||||||  || | |||||||||||||||||||||||||||    
T  43733341 aagacctagaaaaactacaagagaaactatcgagaaggatctagagattaatgagttggataaa 43733404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 10108947 - 10109039
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaa-------tatatgatagaacattatggtg 465  Q
    ||||| ||||||||| |||||  |||||| |||| |||||||||||||||| ||||| |||| |       ||||||||||||||||||||||    
T  10108947 aagacctagaaaaaccataagagaaactaataagaaagatctagagattaacgagtttgatagagatatgttatatgatagaacattatggtg 10109039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 17491813 - 17491743
Alignment:
Q  369 agaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||||| || ||||| |||||||||| ||||  ||||||||||| ||||  | |||||||||||||||||    
T  17491813 agaggcacaggaagacctagaaaaactgtaagagaaactattaagaaagacttggagattaatgagttgga 17491743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 433
Target Start/End: Original strand, 9070122 - 9070175
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatga 433  Q
    ||||| |||||||||||||||  ||||||||| |  ||||||||||||||||||    
T  9070122 aagacctagaaaaactataagaaaaactattatgatagatctagagattaatga 9070175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 27037769 - 27037830
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| ||| ||||||||| | |||||||||| | ||||| || ||||||||||||||||||    
T  27037769 aagacctagtaaaactatacgataaactattaggaaagatataaagattaatgagttggata 27037830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 29520695 - 29520756
Alignment:
Q  303 tggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    ||||||| |||||| ||||||| ||||||||||| |||||| |||| ||  |||||||||||    
T  29520695 tggtttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatgga 29520756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 30559827 - 30559896
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| || ||||||||||||  ||||||| | | ||||| ||||||||||||||||||||  |||||||    
T  30559827 aagacttaaaaaaactataagagaaactatcaggaaagatttagagattaatgagttggatccatatatg 30559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 1549530 - 1549478
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||||||||||  |||||| || | |||||||||||||||||||||||||||    
T  1549530 tagaaaaactataag--aaactacta-gaaagatctagagattaatgagttggata 1549478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 16994592 - 16994532
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| ||||||||||||| |  ||||||||||| | ||| ||||||||| ||||||||||    
T  16994592 aagacctagaaaaactatatgagaaactattaagaatgatttagagattattgagttggat 16994532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 28169526 - 28169586
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| || ||||||||||||  ||||||||| | ||||| | ||||||||||||||||||    
T  28169526 aagacctaaaaaaactataagagaaactattaggaaagattttgagattaatgagttggat 28169586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 38392041 - 38391981
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| ||||||||||||| |  |||| |||||| |||||||| |||||||||||| ||||    
T  38392041 aagacctagaaaaactatatgagaaaccattaagaaagatctacagattaatgagtgggat 38391981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 441
Target Start/End: Complemental strand, 38483092 - 38483056
Alignment:
Q  405 actattaaggaagatctagagattaatgagttggata 441  Q
    |||||| || |||||||||||||||||||||||||||    
T  38483092 actattcagaaagatctagagattaatgagttggata 38483056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 436
Target Start/End: Complemental strand, 45512655 - 45512587
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagtt 436  Q
    |||||||| || ||||| |||||||||||||||  ||||||||| | ||||  | ||||||||||||||    
T  45512655 tagaggcagaggaagacctagaaaaactataagagaaactattaggaaagacttggagattaatgagtt 45512587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 9e-16; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 374 - 441
Target Start/End: Original strand, 28858173 - 28858240
Alignment:
Q  374 caaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| ||||| |||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||    
T  28858173 caaagtaagacttagaaaaactataagacaaactattaagaaagatctagagattaataagttggata 28858240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 45601610 - 45601681
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgat 451  Q
    ||||| |||||||||||||||  |||| |||||| |||||||||||||||||||||||||| || |||||||    
T  45601610 aagacctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttggatcaaaatatgat 45601681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 30664690 - 30664762
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||||| ||||  |||||| |||||||   ||||||||||| ||||||||||||||||||||||||||    
T  30664690 tagaggcaaagaaagatctagaaagactataaaagaaactattaagaaagatctagagattaatgagttggat 30664762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 1569156 - 1569219
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    |||||||||||||||   |||||||||| |||||||||||||||||||||||||| || |||||    
T  1569156 tagaaaaactataagagtaactattaagaaagatctagagattaatgagttggatcaaaatatg 1569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 29653687 - 29653622
Alignment:
Q  387 agaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||| ||||  ||||||||||| |||||||||||||||||||||| |||| | ||||||||    
T  29653687 agaaaaactgtaagagaaactattaagaaagatctagagattaatgagttagatagaaatatgata 29653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 24549824 - 24549776
Alignment:
Q  392 aactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  24549824 aactataagagaaactattaagaaagatctagagattaatgagttggat 24549776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 28628081 - 28628021
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||| | ||||| ||||||||||||||||||||    
T  28628081 aagacctagaaaaactataagagaaactattaggaaagatttagagattaatgagttggat 28628021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 32368497 - 32368425
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||||| ||||  ||||||| |||||||  || |||||||||||||| ||||||||| ||||||||||    
T  32368497 tagaggcaaaggaagatctagaaaatctataagagaagctattaaggaagatttagagattagtgagttggat 32368425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 37976369 - 37976429
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||| |||||| || | ||||| ||||||||||||||||||||    
T  37976369 aagacctagaaaaactataagtgaaactaatatgaaagatttagagattaatgagttggat 37976429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 48202946 - 48202894
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||| ||||    
T  48202946 gcttaggtggtttgcgcatgtagagagaagacttgtagattctgtagtaagga 48202894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 6420734 - 6420668
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatg 362  Q
    |||||||||||||| |||||| ||||||| |||||||||| ||||||| |||| ||  |||||||||    
T  6420734 gcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtagatcagatg 6420668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 30144932 - 30144970
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30144932 aaactattaagaaagatctagagattaatgagttggata 30144970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 12966150 - 12966211
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||||||  ||||||||||| || || ||||||||||||| |||||||    
T  12966150 aagacctagaaaaactataagagaaactattaagaaatatttagagattaatgatttggata 12966211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 7220878 - 7220958
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatat 448  Q
    |||||||| || ||||| || |||||| |||||| ||| ||||||  ||||| |||||||||||| |||||||||| ||||    
T  7220878 tagaggcagagtaagacctataaaaaccataagtgaaattattaacaaagatttagagattaatgtgttggataaagatat 7220958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 428
Target Start/End: Complemental strand, 30814831 - 30814771
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagatt 428  Q
    |||||||| || ||||| |||||| ||||||||  ||||||||||| ||||||||||||||    
T  30814831 tagaggcagaggaagacctagaaacactataagagaaactattaagaaagatctagagatt 30814771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 41461242 - 41461294
Alignment:
Q  389 aaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||||  ||||||||||  ||||||||| |||||||||||||||||    
T  41461242 aaaaactataagagaaactattaataaagatctagtgattaatgagttggata 41461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 47848712 - 47848780
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| |||||| ||||||| ||||||| |||||||| | |||| ||  |||||||||||    
T  47848712 gcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatgga 47848780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 38135361 - 38135302
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||| ||||||  ||||||||||  ||||| |||||||||||||||||||    
T  38135361 aagacctagaaaaagtataagagaaactattaaaaaagatttagagattaatgagttgga 38135302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 43281971 - 43282034
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    |||||||||  ||||  |||| |||||| |||||||||||||||||||||||||| || |||||    
T  43281971 tagaaaaaccgtaagagaaacaattaagtaagatctagagattaatgagttggatcaaaatatg 43282034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 22174122 - 22174187
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatga 433  Q
    |||||||| || || || |||||||||||||||  ||||||| ||  |||||||||||||||||||    
T  22174122 tagaggcagaggaaaacgtagaaaaactataagagaaactataaacaaagatctagagattaatga 22174187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 28542069 - 28542032
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  28542069 aaactattaagaaagatttagagattaatgagttggat 28542032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 30200112 - 30200051
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| |||||||||||   || || ||||| |||||||||||||||||||||| ||||    
T  30200112 aagacataaaaaaactataaaaaaatcttttaagaaagatctagagattaatgagtttgata 30200051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 40830336 - 40830393
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    ||||| ||||||| |||||||  ||||||||||| | |||||||| ||||||||||||    
T  40830336 aagacctagaaaatctataagagaaactattaagaaggatctagaaattaatgagttg 40830393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Original strand, 41483644 - 41483693
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||||| |||||||||| ||||| |||||||||| | ||||||||    
T  41483644 aaactattaagaaagatctagaaattaacgagttggatatagatatgata 41483693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 42177166 - 42177097
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| ||||||| |||||||  || |||||||| ||||||||||||| ||||||||  ||||| |||||    
T  42177166 aagacgtagaaaacctataagagaatctattaagaaagatctagagataaatgagtttcataaaaatatg 42177097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 19262677 - 19262637
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagatt 336  Q
    ||||||||||||||||||||| ||||||| || ||||||||    
T  19262677 gcttaggtggtttgagcatgtagagagaagacctgtagatt 19262637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 21517528 - 21517468
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||||  || || ||||||||||| ||||||||    
T  21517528 aagacctagaaaaactataagagaaactattaaaaaatatttagagattaataagttggat 21517468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 28628177 - 28628109
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| ||||||  ||||||||| |||||||| |||||| |||| ||  |||| ||||||    
T  28628177 gcttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccgatgga 28628109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 35713733 - 35713785
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| |||||| ||||||| ||||||| ||| |||||| ||||    
T  35713733 gcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaagga 35713785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 43791682 - 43791638
Alignment:
Q  299 taggtggtttgagcatgttgagagaaaacttgtagattctgtagt 343  Q
    ||||||||||| |||||| ||||||| || |||||||||||||||    
T  43791682 taggtggtttgggcatgtggagagaagacctgtagattctgtagt 43791638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 45558401 - 45558469
Alignment:
Q  297 cttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatggac 365  Q
    ||||||||||||| ||| || ||||||| || ||| ||||||||||| |||| ||  ||||||||||||    
T  45558401 cttaggtggtttgtgcacgtagagagaatacctgtggattctgtagttaggagagtagatcagatggac 45558469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 297 - 440
Target Start/End: Complemental strand, 34739 - 34593
Alignment:
Q  297 cttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcaga--tgga-caatagaggcaaagcaagacatagaaaaa 393  Q
    ||||||||| ||| |||||| |||||||| |||| ||||| |||||| | || ||  |||||||  | || || |||||||| || ||||| ||||||||    
T  34739 cttaggtgggttgggcatgtagagagaaagcttggagattatgtagtaacgagagtagatcagagttagatcactagaggcagaggaagacctagaaaaa 34640  T
Q  394 ctataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||  |||| |||||| |||||||| |||||||||||||||||    
T  34639 ctataagagaaaccattaagaaagatctaaagattaatgagttggat 34593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 452
Target Start/End: Complemental strand, 1747801 - 1747717
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    |||||||| || ||||| ||||||||| |||||  |||||  |||| | ||||||||||||||||||||||||||| ||||||||    
T  1747801 tagaggcagaggaagacctagaaaaaccataagagaaactggtaagaaggatctagagattaatgagttggataaagatatgata 1747717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 1681646 - 1681586
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatgg 463  Q
    ||||||||||| | |||||||||||||||||||||| ||   |||||||||||||||||||    
T  1681646 aaactattaagaaggatctagagattaatgagttgggtagggatatgatagaacattatgg 1681586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 31832001 - 31831947
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||||||| ||  ||||||||||| ||||||||||||||| ||||||||||    
T  31832001 tagaaaaactatcagagaaactattaagaaagatctagagattactgagttggat 31831947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 10617376 - 10617323
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||||||||||||||  |||| |||||| | |||||||||||||||||||||||    
T  10617376 tagaaaaactataagagaaaccattaagaaggatctagagattaatgagttgga 10617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 306350 - 306404
Alignment:
Q  294 aagcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||||  |||||| || |||| | |||||||||||||||||||||    
T  306350 aagcttaggtggtttctgcatgtagatagaagaattgtagattctgtagtgagga 306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 38903 - 38956
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    |||||||||||||||  ||||||||| | | ||||||||||| |||||||||||    
T  38903 tagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 38956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 8021174 - 8021125
Alignment:
Q  387 agaaaaactataagttaaactattaaggaagatctagagattaatgagtt 436  Q
    |||||||| |||||| |||| |||||||||| |||||||||||| |||||    
T  8021174 agaaaaaccataagtgaaaccattaaggaagttctagagattaacgagtt 8021125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 33997704 - 33997631
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| | | |||||||||||  ||||||||||| ||   ||||||||||||||||||||||    
T  33997704 tagaggcagaggaagaccttggaaaactataagagaaactattaagaaaagcctagagattaatgagttggata 33997631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 460
Target Start/End: Original strand, 34877968 - 34878001
Alignment:
Q  427 ttaatgagttggataaatatatgatagaacatta 460  Q
    ||||||| ||||||||||||||||||||||||||    
T  34877968 ttaatgatttggataaatatatgatagaacatta 34878001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 9593856 - 9593796
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||| ||||||  ||||||||| | ||||  ||||||||||||||||||||    
T  9593856 aagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggat 9593796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 9593950 - 9593882
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| |||||| ||||||| || ||||||| ||||||| || | ||  |||||||||||    
T  9593950 gcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatgga 9593882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 31818665 - 31818725
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||||||| | ||| | | ||||||||||||||||||    
T  31818665 aagacctagaaaaactataagagaaactattaggaaaggtttggagattaatgagttggat 31818725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 9e-16; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 12231505 - 12231584
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatgatagaacattatggtg 465  Q
    |||||||||||||||  | ||||||||| ||||||| ||||||||||||||||||| | ||||||||||| |||| ||||    
T  12231505 tagaaaaactataagagagactattaagaaagatctcgagattaatgagttggatagagatatgatagaatattacggtg 12231584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 467
Target Start/End: Original strand, 40416505 - 40416599
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat--aaata-----tatgatagaacattatggtgta 467  Q
    ||||| |||||||||||||||  ||||||||||| |||||||| |||||||||||||||||  |||||     ||||||||||||||||||||||    
T  40416505 aagacctagaaaaactataagacaaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatggtgta 40416599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 19969360 - 19969296
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaat 444  Q
    ||||| |||||||||||||||  ||||||||||  ||||||||||||||||||||||||| ||||    
T  19969360 aagacctagaaaaactataagagaaactattaacaaagatctagagattaatgagttggagaaat 19969296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 8203282 - 8203223
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||    
T  8203282 aagacctagaaaaactataagagaaactattaaaaaagatctagagattaatgagttgga 8203223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 30834138 - 30834064
Alignment:
Q  367 atagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||| | || ||||| ||||||| |||||||  ||||||||| | |||||||||||||||||||||||||||    
T  30834138 atagagggagaggaagacctagaaaagctataagagaaactattacgaaagatctagagattaatgagttggata 30834064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 6025727 - 6025800
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| |||||||||||||||  | |||| |||  |||||||||||||||||||||||||||    
T  6025727 tagaggcagaggaagacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagttggata 6025800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 8343029 - 8342968
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||| |||||||||||||||  |||| |||||  |||||||||||||||||||||||||||    
T  8343029 aagacctagaaaaactataagagaaacaattaataaagatctagagattaatgagttggata 8342968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 29577290 - 29577221
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||||||||||||| ||||| || |||||    
T  29577290 aagacctagaaaaactacaacataaactattaagaaagatctagagattaatgagctggatcaaaatatg 29577221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 38869016 - 38869085
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg 449  Q
    ||||| |||||||||||||||  ||| ||||||| ||||||||| |||||||| |||||||| |||||||    
T  38869016 aagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatatg 38869085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 42501248 - 42501303
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||||||||||  ||| ||||||| |||||||| ||||||||||||||||||    
T  42501248 tagaaaaactataagagaaattattaagaaagatctatagattaatgagttggata 42501303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 3818996 - 3818947
Alignment:
Q  388 gaaaaactataagttaaactattaaggaagatctagagattaatgagttg 437  Q
    |||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  3818996 gaaaaactataagagaaactattaagaaagatttagagattaatgagttg 3818947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 33561018 - 33560945
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||| | |||||||||| ||||  ||||||||||| |||||||||||||||  ||||||||||    
T  33561018 tagaggcagaggaagtcctagaaaaactgtaagggaaactattaagtaagatctagagattagcgagttggata 33560945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 46388516 - 46388595
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg--atagaacattatgg 463  Q
    |||||||||||||||  ||||| ||||| | |||||||||||| ||||||||||||   |||||  ||||||||||||||    
T  46388516 tagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgatatagaacattatgg 46388595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 46394960 - 46395039
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatatg--atagaacattatgg 463  Q
    |||||||||||||||  ||||| ||||| | |||||||||||| ||||||||||||   |||||  ||||||||||||||    
T  46394960 tagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgatatagaacattatgg 46395039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 48431650 - 48431582
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| |||||| ||||||| ||||||||||| |||||| | || ||  |||||||||||    
T  48431650 gcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagatgga 48431582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 10569311 - 10569264
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagt 343  Q
    |||||||||||||| |||||| ||||||| || |||||||||||||||    
T  10569311 gcttaggtggtttgggcatgtagagagaagacctgtagattctgtagt 10569264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 19908611 - 19908560
Alignment:
Q  297 cttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||| ||||    
T  19908611 cttaagtggtttgagcatgtatagagaaaacttgtagattttgtagtaagga 19908560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 28528489 - 28528548
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| || |||||||||||   ||||||||||| | |||||||||||||||||||||||    
T  28528489 aagacctaaaaaaactataacagaaactattaagaaggatctagagattaatgagttgga 28528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 50771704 - 50771645
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||||||  ||||||||||| | || |||||||||||| |||||||    
T  50771704 aagacctagaaaaactataagcgaaactattaagaaggacctagagattaataagttgga 50771645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 12135864 - 12135902
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  12135864 aaactattaagaaaaatctagagattaatgagttggata 12135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 14225933 - 14225891
Alignment:
Q  424 agattaatgagttggataaatatatgatagaacattatggtgt 466  Q
    |||||||||||||||||| | ||||||||||||| ||||||||    
T  14225933 agattaatgagttggatagagatatgatagaacagtatggtgt 14225891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 43367776 - 43367710
Alignment:
Q  382 gacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggataaatatat 448  Q
    ||||||||||||||||||   ||||||| ||  |||||||| |||||||||||||| ||||| ||||    
T  43367776 gacatagaaaaactataaaagaaactatcaacaaagatctaaagattaatgagttgaataaaaatat 43367710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 853945 - 853872
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| || |||| ||||| |  ||||||||||| | ||||||||||||| |||||||||||    
T  853945 tagaggcagaggaagacctaaaaaatctatacgagaaactattaagaaggatctagagattagtgagttggata 853872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Complemental strand, 4590657 - 4590608
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||||| ||||| || ||||| |||||||||||| ||||||||||    
T  4590657 aaactattaagaaagatttatagattgatgagttggatagatatatgata 4590608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Complemental strand, 10585022 - 10584973
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||||| |||||| |||||||||||||||||| | | ||||||||    
T  10585022 aaactattaagaaagatccagagattaatgagttggacagagatatgata 10584973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Original strand, 15577575 - 15577624
Alignment:
Q  403 aaactattaaggaagatctagagattaatgagttggataaatatatgata 452  Q
    ||||||||||| | ||| ||||||||||||||||||||| | ||||||||    
T  15577575 aaactattaagaaggatatagagattaatgagttggatagagatatgata 15577624  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 44008701 - 44008774
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| |||||||| | ||||  |||||||  || ||||||||||||| |||||||||||||    
T  44008701 tagaggcagaggaagacctagaaaaaatctaagagaaactatcgagaaagatctagagatcaatgagttggata 44008774  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 109106 - 109070
Alignment:
Q  415 aagatctagagattaatgagttggataaatatatgat 451  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  109106 aagatatagacattaatgagttggataaatatatgat 109070  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 8796331 - 8796403
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    |||||||| || |||||  | ||||||| ||||  ||||||||||| |||||||||| |||||||| ||||||    
T  8796331 tagaggcagaggaagaccaataaaaactttaagagaaactattaagaaagatctagatattaatgacttggat 8796403  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 30445250 - 30445306
Alignment:
Q  385 atagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||||| |||||  ||||||| |||   |||||||||||||||||||||||||    
T  30445250 atagaaaaacgataagagaaactatcaagagggatctagagattaatgagttggata 30445306  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 32404674 - 32404618
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagtt 436  Q
    ||||| || ||||||||||||  ||||||||| | ||||| ||||||||||||||||    
T  32404674 aagacctacaaaaactataagagaaactattaggaaagatttagagattaatgagtt 32404618  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 38868920 - 38868972
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||||||||| |||||| ||||||| ||| ||||||||| ||| |||||    
T  38868920 gcttaggtggtttgggcatgtagagagaacactagtagattctctagcgagga 38868972  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 46388414 - 46388466
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgagga 348  Q
    |||||||| |||||  ||||| ||||||| |||||||||||||||||| ||||    
T  46388414 gcttaggtagtttgcacatgtagagagaagacttgtagattctgtagtaagga 46388466  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 52561737 - 52561677
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggat 440  Q
    ||||| |||||||||||||||  ||||| ||| | ||||| ||||| ||||||||||||||    
T  52561737 aagacttagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggat 52561677  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 178568 - 178509
Alignment:
Q  380 aagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttgga 439  Q
    ||||| |||||||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  178568 aagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttgga 178509  T

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Target: scaffold0325 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 435
Target Start/End: Original strand, 11919 - 11986
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagt 435  Q
    ||||||||||  ||||  |||||||||||||||  ||||||||||| | |||||||||||||||||||    
T  11919 tagaggcaaaagaagaactagaaaaactataagagaaactattaagaaggatctagagattaatgagt 11986  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 66659 - 66732
Alignment:
Q  368 tagaggcaaagcaagacatagaaaaactataagttaaactattaaggaagatctagagattaatgagttggata 441  Q
    |||||||| || ||||| |||||||| |||||   ||| ||||||| |||||||||||||||||||||| ||||    
T  66659 tagaggcagaggaagacctagaaaaattataaaaaaaattattaagaaagatctagagattaatgagttagata 66732  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 347017 - 346949
Alignment:
Q  296 gcttaggtggtttgagcatgttgagagaaaacttgtagattctgtagtgaggaaagcggatcagatgga 364  Q
    |||||||||||||| | |||| |||||||||| | ||||||||||||| |||| ||  |||||||||||    
T  347017 gcttaggtggtttgggtatgtagagagaaaacctatagattctgtagtaaggagagttgatcagatgga 346949  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 346915 - 346870
Alignment:
Q  386 tagaaaaactataagttaaactattaaggaagatctagagattaat 431  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||    
T  346915 tagaaaaactacaagataaactattaaaaaagatctagagattaat 346870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 441
Target Start/End: Complemental strand, 2424 - 2388
Alignment:
Q  405 actattaaggaagatctagagattaatgagttggata 441  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  2424 actattaagaaagatctagagattaatgagtttgata 2388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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