View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1390_low_38 (Length: 482)

Name: NF1390_low_38
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1390_low_38
NF1390_low_38
[»] chr1 (63 HSPs)
chr1 (134-467)||(46895801-46896138)
chr1 (219-339)||(19547034-19547154)
chr1 (238-337)||(34582657-34582756)
chr1 (253-339)||(18032190-18032276)
chr1 (202-327)||(14758572-14758697)
chr1 (240-339)||(44584056-44584155)
chr1 (226-327)||(26297716-26297820)
chr1 (413-470)||(3815054-3815111)
chr1 (231-316)||(26765978-26766063)
chr1 (239-334)||(38294014-38294110)
chr1 (240-339)||(14890492-14890590)
chr1 (415-470)||(37008218-37008273)
chr1 (416-470)||(12074958-12075012)
chr1 (416-470)||(40877003-40877057)
chr1 (418-467)||(23953111-23953160)
chr1 (226-327)||(30529367-30529468)
chr1 (202-339)||(44920219-44920356)
chr1 (240-339)||(14892041-14892139)
chr1 (414-461)||(40876700-40876747)
chr1 (412-470)||(12075271-12075329)
chr1 (237-339)||(18038894-18038996)
chr1 (245-327)||(41649899-41649981)
chr1 (411-461)||(45719715-45719765)
chr1 (413-470)||(367177-367234)
chr1 (413-470)||(7196969-7197026)
chr1 (286-331)||(9500924-9500969)
chr1 (413-470)||(15788409-15788466)
chr1 (413-462)||(21258918-21258967)
chr1 (413-470)||(41915780-41915837)
chr1 (414-463)||(46895437-46895486)
chr1 (412-461)||(49696932-49696981)
chr1 (413-462)||(51549406-51549455)
chr1 (414-462)||(7058389-7058437)
chr1 (414-462)||(7196676-7196724)
chr1 (283-339)||(26533765-26533821)
chr1 (411-470)||(366883-366942)
chr1 (413-468)||(10532214-10532269)
chr1 (412-470)||(4476199-4476257)
chr1 (413-470)||(6129624-6129682)
chr1 (413-462)||(50504816-50504866)
chr1 (413-470)||(3814759-3814816)
chr1 (262-339)||(6983018-6983095)
chr1 (412-469)||(24491154-24491211)
chr1 (274-339)||(25095610-25095675)
chr1 (413-470)||(50503700-50503757)
chr1 (414-470)||(2350094-2350150)
chr1 (414-462)||(7159507-7159555)
chr1 (414-470)||(15911960-15912016)
chr1 (229-293)||(46729219-46729283)
chr1 (412-467)||(35580736-35580791)
chr1 (412-462)||(1712368-1712418)
chr1 (412-462)||(39276964-39277014)
chr1 (424-466)||(44743731-44743773)
chr1 (416-461)||(4474757-4474802)
chr1 (411-460)||(11932934-11932983)
chr1 (413-462)||(26811452-26811501)
chr1 (270-339)||(36331618-36331687)
chr1 (417-470)||(41611244-41611297)
chr1 (417-462)||(43117258-43117303)
chr1 (413-462)||(51462180-51462228)
chr1 (411-471)||(4059519-4059579)
chr1 (414-462)||(12061586-12061634)
chr1 (414-470)||(49695350-49695406)
[»] chr5 (43 HSPs)
chr5 (219-336)||(11010248-11010365)
chr5 (238-336)||(40944271-40944369)
chr5 (413-470)||(42585985-42586042)
chr5 (412-470)||(22471954-22472012)
chr5 (413-470)||(6464333-6464390)
chr5 (413-470)||(36361032-36361089)
chr5 (412-462)||(128252-128302)
chr5 (413-470)||(20126437-20126494)
chr5 (199-332)||(42877252-42877385)
chr5 (220-339)||(248447-248567)
chr5 (413-470)||(20364681-20364738)
chr5 (413-462)||(38162592-38162641)
chr5 (411-467)||(7611071-7611127)
chr5 (231-307)||(18988786-18988862)
chr5 (412-470)||(42586345-42586403)
chr5 (417-463)||(43355721-43355767)
chr5 (433-470)||(20126676-20126713)
chr5 (243-324)||(22528740-22528821)
chr5 (202-325)||(16980752-16980876)
chr5 (415-467)||(26366085-26366137)
chr5 (411-467)||(36361422-36361478)
chr5 (284-339)||(26663636-26663691)
chr5 (284-339)||(26935231-26935286)
chr5 (411-470)||(38163673-38163732)
chr5 (412-470)||(3999084-3999142)
chr5 (417-467)||(7611428-7611478)
chr5 (413-467)||(10331955-10332009)
chr5 (417-467)||(13428138-13428188)
chr5 (412-470)||(38973326-38973383)
chr5 (413-467)||(39049016-39049070)
chr5 (413-470)||(15204288-15204344)
chr5 (413-470)||(24242016-24242073)
chr5 (238-339)||(35947644-35947745)
chr5 (413-462)||(37887671-37887720)
chr5 (238-339)||(42265437-42265538)
chr5 (271-327)||(4857273-4857329)
chr5 (414-470)||(6815500-6815556)
chr5 (250-298)||(14328455-14328503)
chr5 (239-307)||(15206500-15206568)
chr5 (419-471)||(15885135-15885187)
chr5 (411-471)||(16900994-16901054)
chr5 (413-469)||(17441155-17441211)
chr5 (413-461)||(31874118-31874166)
[»] chr3 (61 HSPs)
chr3 (197-332)||(21813119-21813254)
chr3 (237-339)||(29212701-29212803)
chr3 (413-470)||(3193039-3193096)
chr3 (413-462)||(17258196-17258245)
chr3 (413-470)||(33944867-33944924)
chr3 (243-339)||(36494176-36494273)
chr3 (218-339)||(40629093-40629214)
chr3 (413-470)||(54476042-54476099)
chr3 (414-462)||(2181315-2181363)
chr3 (231-327)||(49682180-49682276)
chr3 (415-470)||(37755195-37755250)
chr3 (411-462)||(40988595-40988646)
chr3 (412-462)||(5636673-5636723)
chr3 (416-470)||(51453544-51453597)
chr3 (413-470)||(50380154-50380211)
chr3 (413-470)||(51224925-51224982)
chr3 (413-470)||(53255282-53255339)
chr3 (414-462)||(53254963-53255011)
chr3 (411-462)||(32770648-32770699)
chr3 (416-459)||(33445781-33445824)
chr3 (411-454)||(40989672-40989715)
chr3 (411-466)||(46336043-46336098)
chr3 (416-470)||(17256570-17256624)
chr3 (237-327)||(32606385-32606475)
chr3 (412-462)||(50764197-50764246)
chr3 (238-339)||(7278169-7278270)
chr3 (412-461)||(10732414-10732463)
chr3 (254-327)||(39144981-39145054)
chr3 (417-470)||(42686485-42686538)
chr3 (412-469)||(44457445-44457502)
chr3 (413-470)||(48907292-48907349)
chr3 (413-462)||(50381572-50381621)
chr3 (414-462)||(33447237-33447285)
chr3 (414-462)||(35495213-35495261)
chr3 (413-469)||(43040443-43040499)
chr3 (249-320)||(3383356-3383427)
chr3 (415-462)||(32831161-32831208)
chr3 (415-470)||(33943535-33943590)
chr3 (415-462)||(36315790-36315837)
chr3 (245-320)||(46895927-46896002)
chr3 (284-339)||(53040470-53040525)
chr3 (412-462)||(1807438-1807488)
chr3 (417-467)||(6128512-6128562)
chr3 (433-471)||(8338959-8338997)
chr3 (269-327)||(31294383-31294441)
chr3 (412-462)||(54477335-54477385)
chr3 (286-339)||(2831548-2831601)
chr3 (413-462)||(3354951-3355000)
chr3 (259-328)||(25095464-25095533)
chr3 (413-470)||(28204479-28204536)
chr3 (413-470)||(46934245-46934302)
chr3 (413-470)||(49001649-49001706)
chr3 (413-462)||(49002767-49002816)
chr3 (417-462)||(51226516-51226561)
chr3 (412-461)||(53764573-53764622)
chr3 (413-470)||(54716475-54716532)
chr3 (231-327)||(3973826-3973922)
chr3 (414-470)||(5635348-5635404)
chr3 (413-469)||(19975547-19975603)
chr3 (414-462)||(32772046-32772094)
chr3 (415-470)||(49075562-49075618)
[»] chr8 (70 HSPs)
chr8 (240-339)||(12787849-12787948)
chr8 (237-339)||(10565346-10565448)
chr8 (240-339)||(44042538-44042637)
chr8 (237-339)||(4166496-4166598)
chr8 (412-470)||(14170420-14170478)
chr8 (412-467)||(23475622-23475677)
chr8 (411-470)||(35795589-35795648)
chr8 (411-463)||(27225778-27225830)
chr8 (414-470)||(45308454-45308510)
chr8 (412-470)||(755901-755959)
chr8 (416-470)||(35795219-35795273)
chr8 (238-327)||(4507917-4508006)
chr8 (413-470)||(17512096-17512153)
chr8 (417-470)||(23936282-23936335)
chr8 (238-339)||(24457828-24457929)
chr8 (237-316)||(6904192-6904271)
chr8 (413-472)||(26889292-26889351)
chr8 (414-459)||(17512456-17512501)
chr8 (198-327)||(20142403-20142532)
chr8 (413-470)||(45522449-45522506)
chr8 (414-466)||(6041089-6041141)
chr8 (414-466)||(6044721-6044773)
chr8 (226-306)||(14237162-14237242)
chr8 (412-459)||(11289315-11289362)
chr8 (411-462)||(12278832-12278883)
chr8 (414-469)||(34602014-34602069)
chr8 (272-323)||(39312194-39312245)
chr8 (427-470)||(45163718-45163761)
chr8 (415-461)||(5916348-5916394)
chr8 (416-470)||(12280359-12280413)
chr8 (412-462)||(18650929-18650979)
chr8 (412-470)||(44807332-44807390)
chr8 (413-462)||(756123-756172)
chr8 (417-462)||(2802651-2802696)
chr8 (413-470)||(2803006-2803063)
chr8 (413-470)||(5180694-5180751)
chr8 (417-470)||(7010926-7010979)
chr8 (412-469)||(27453124-27453181)
chr8 (238-339)||(34336477-34336578)
chr8 (414-462)||(20788034-20788082)
chr8 (413-469)||(27453534-27453590)
chr8 (231-327)||(33285922-33286018)
chr8 (199-327)||(43238106-43238234)
chr8 (414-461)||(8952829-8952876)
chr8 (229-336)||(41105993-41106100)
chr8 (227-278)||(41646611-41646662)
chr8 (411-462)||(45309587-45309638)
chr8 (412-462)||(8409831-8409880)
chr8 (413-467)||(9498908-9498962)
chr8 (436-470)||(26889649-26889683)
chr8 (249-327)||(32332866-32332944)
chr8 (236-334)||(40464410-40464508)
chr8 (412-470)||(41487198-41487256)
chr8 (412-461)||(521709-521758)
chr8 (413-462)||(1003811-1003859)
chr8 (434-471)||(4423049-4423086)
chr8 (274-339)||(5020092-5020157)
chr8 (417-470)||(5916914-5916967)
chr8 (413-470)||(10285102-10285158)
chr8 (422-471)||(12723269-12723318)
chr8 (416-465)||(17075016-17075065)
chr8 (416-465)||(17573205-17573254)
chr8 (413-470)||(20853377-20853434)
chr8 (413-470)||(31947853-31947910)
chr8 (285-329)||(2335799-2335843)
chr8 (414-462)||(8347551-8347599)
chr8 (417-461)||(14170704-14170748)
chr8 (414-470)||(18539133-18539188)
chr8 (413-469)||(34602435-34602491)
chr8 (413-461)||(41602878-41602926)
[»] chr4 (56 HSPs)
chr4 (238-339)||(46506326-46506429)
chr4 (240-339)||(19652634-19652733)
chr4 (238-327)||(7388788-7388877)
chr4 (226-327)||(38380471-38380572)
chr4 (202-327)||(38949027-38949152)
chr4 (415-470)||(1139157-1139212)
chr4 (249-320)||(40781425-40781496)
chr4 (413-467)||(13388160-13388214)
chr4 (412-470)||(53061806-53061864)
chr4 (413-470)||(31760765-31760822)
chr4 (413-470)||(41148164-41148221)
chr4 (414-462)||(53831152-53831200)
chr4 (236-327)||(32893024-32893115)
chr4 (415-470)||(33641852-33641907)
chr4 (411-470)||(49804354-49804412)
chr4 (415-461)||(8672013-8672059)
chr4 (253-339)||(24916382-24916468)
chr4 (412-470)||(51542942-51543000)
chr4 (238-323)||(5047221-5047306)
chr4 (413-466)||(21552919-21552972)
chr4 (413-462)||(38828507-38828556)
chr4 (231-328)||(41370165-41370262)
chr4 (417-470)||(47742234-47742287)
chr4 (417-470)||(47742602-47742655)
chr4 (412-472)||(6033899-6033959)
chr4 (414-462)||(30064002-30064050)
chr4 (231-339)||(49011880-49011988)
chr4 (413-461)||(53578922-53578970)
chr4 (412-462)||(1140631-1140682)
chr4 (414-465)||(6979688-6979739)
chr4 (415-462)||(8143034-8143081)
chr4 (415-470)||(8144384-8144439)
chr4 (412-462)||(14816873-14816924)
chr4 (284-339)||(30978698-30978753)
chr4 (414-461)||(55318047-55318094)
chr4 (412-470)||(3369845-3369903)
chr4 (254-332)||(23133068-23133146)
chr4 (433-471)||(27018461-27018499)
chr4 (413-467)||(30627034-30627088)
chr4 (253-323)||(31871074-31871144)
chr4 (237-307)||(36721589-36721659)
chr4 (269-327)||(40071322-40071380)
chr4 (412-466)||(53312547-53312601)
chr4 (412-470)||(53831318-53831375)
chr4 (417-462)||(5548019-5548064)
chr4 (417-470)||(31761860-31761913)
chr4 (413-462)||(35393935-35393984)
chr4 (414-467)||(36413968-36414021)
chr4 (417-470)||(37831595-37831648)
chr4 (240-313)||(40062309-40062382)
chr4 (413-470)||(44121045-44121102)
chr4 (245-314)||(50247943-50248012)
chr4 (249-333)||(23016237-23016321)
chr4 (414-462)||(29776885-29776933)
chr4 (413-461)||(35830312-35830360)
chr4 (239-339)||(40480175-40480275)
[»] scaffold0172 (1 HSPs)
scaffold0172 (220-327)||(13478-13585)
[»] chr7 (58 HSPs)
chr7 (413-470)||(7873508-7873565)
chr7 (414-470)||(10691298-10691354)
chr7 (413-467)||(30283405-30283459)
chr7 (413-470)||(282859-282916)
chr7 (413-470)||(327436-327493)
chr7 (417-470)||(10691647-10691700)
chr7 (219-339)||(6771838-6771958)
chr7 (414-462)||(29933190-29933238)
chr7 (229-327)||(3298231-3298329)
chr7 (412-462)||(7873897-7873947)
chr7 (412-470)||(43078061-43078119)
chr7 (198-327)||(44319819-44319948)
chr7 (414-470)||(24679102-24679158)
chr7 (412-467)||(21954335-21954390)
chr7 (416-470)||(9477448-9477502)
chr7 (412-470)||(42438034-42438092)
chr7 (412-470)||(43092038-43092096)
chr7 (413-470)||(21939332-21939389)
chr7 (417-462)||(26974233-26974278)
chr7 (413-462)||(29933539-29933588)
chr7 (262-339)||(36061530-36061607)
chr7 (285-334)||(39170331-39170380)
chr7 (413-469)||(5490924-5490980)
chr7 (240-339)||(24557734-24557833)
chr7 (411-471)||(27869193-27869253)
chr7 (414-470)||(31530376-31530432)
chr7 (411-467)||(40139821-40139877)
chr7 (414-462)||(42436829-42436877)
chr7 (412-471)||(20636865-20636924)
chr7 (412-467)||(21202862-21202917)
chr7 (427-470)||(30283723-30283766)
chr7 (412-467)||(30503704-30503759)
chr7 (229-324)||(31902744-31902839)
chr7 (411-470)||(33159481-33159540)
chr7 (411-470)||(46266511-46266570)
chr7 (412-470)||(18201352-18201410)
chr7 (245-339)||(34681693-34681787)
chr7 (412-470)||(40139527-40139585)
chr7 (424-466)||(47909605-47909647)
chr7 (413-470)||(1449982-1450039)
chr7 (412-469)||(5490502-5490559)
chr7 (238-327)||(6707891-6707980)
chr7 (412-461)||(9477131-9477180)
chr7 (417-462)||(9500168-9500213)
chr7 (238-339)||(17883317-17883418)
chr7 (262-339)||(22739463-22739540)
chr7 (413-462)||(24432335-24432384)
chr7 (238-339)||(26402786-26402887)
chr7 (414-462)||(30505147-30505196)
chr7 (242-339)||(41898255-41898352)
chr7 (413-462)||(46199052-46199101)
chr7 (280-327)||(2699270-2699317)
chr7 (255-339)||(5495991-5496075)
chr7 (240-339)||(6775232-6775331)
chr7 (414-470)||(10385706-10385762)
chr7 (414-470)||(11742915-11742971)
chr7 (414-470)||(20505267-20505323)
chr7 (275-323)||(38452188-38452236)
[»] chr2 (62 HSPs)
chr2 (226-327)||(32770762-32770863)
chr2 (240-339)||(27921891-27921991)
chr2 (413-470)||(14816055-14816112)
chr2 (219-338)||(18734354-18734473)
chr2 (414-467)||(4856709-4856762)
chr2 (413-466)||(8740153-8740206)
chr2 (226-327)||(32438074-32438175)
chr2 (414-462)||(11363882-11363930)
chr2 (411-470)||(28719314-28719373)
chr2 (417-467)||(8740449-8740498)
chr2 (237-335)||(11580424-11580522)
chr2 (412-462)||(12802470-12802520)
chr2 (413-470)||(52297-52354)
chr2 (417-470)||(21631821-21631874)
chr2 (414-462)||(14815698-14815746)
chr2 (414-470)||(15023096-15023152)
chr2 (226-338)||(36260429-36260541)
chr2 (412-463)||(9780950-9781001)
chr2 (411-462)||(14983966-14984017)
chr2 (285-328)||(25093866-25093909)
chr2 (411-466)||(35500037-35500092)
chr2 (417-467)||(4423780-4423830)
chr2 (412-470)||(36286411-36286469)
chr2 (412-470)||(39374387-39374445)
chr2 (413-470)||(23280888-23280945)
chr2 (238-339)||(29260331-29260432)
chr2 (412-469)||(29825018-29825074)
chr2 (413-470)||(35500349-35500406)
chr2 (413-462)||(39672687-39672735)
chr2 (417-462)||(44078555-44078600)
chr2 (414-470)||(10857339-10857395)
chr2 (418-462)||(23049830-23049874)
chr2 (425-469)||(29370727-29370771)
chr2 (287-339)||(29865825-29865877)
chr2 (414-470)||(32661692-32661748)
chr2 (411-470)||(2755207-2755266)
chr2 (238-293)||(7933341-7933396)
chr2 (268-327)||(11252722-11252781)
chr2 (415-462)||(17850500-17850547)
chr2 (411-462)||(43890097-43890148)
chr2 (412-462)||(4423420-4423469)
chr2 (412-462)||(8030124-8030174)
chr2 (249-339)||(8964393-8964483)
chr2 (245-339)||(9153486-9153579)
chr2 (413-471)||(11176154-11176212)
chr2 (416-470)||(11188308-11188362)
chr2 (413-455)||(21633340-21633382)
chr2 (412-470)||(32661402-32661460)
chr2 (245-315)||(33617966-33618036)
chr2 (229-327)||(33962938-33963036)
chr2 (412-470)||(43741759-43741816)
chr2 (412-462)||(44618003-44618053)
chr2 (413-470)||(10741335-10741392)
chr2 (413-470)||(20650369-20650426)
chr2 (413-462)||(21024726-21024775)
chr2 (413-470)||(23048289-23048346)
chr2 (413-470)||(23685822-23685878)
chr2 (422-471)||(28851673-28851722)
chr2 (413-462)||(34600546-34600595)
chr2 (434-470)||(16143687-16143723)
chr2 (415-467)||(28451640-28451692)
chr2 (417-469)||(42274782-42274833)
[»] chr6 (30 HSPs)
chr6 (412-470)||(12203890-12203948)
chr6 (239-339)||(5678476-5678576)
chr6 (414-470)||(11624306-11624362)
chr6 (414-470)||(28574564-28574620)
chr6 (412-469)||(2173878-2173935)
chr6 (414-470)||(11623159-11623215)
chr6 (414-470)||(22517491-22517547)
chr6 (220-339)||(10570928-10571047)
chr6 (416-470)||(2018575-2018629)
chr6 (412-466)||(9070131-9070185)
chr6 (411-461)||(12798724-12798774)
chr6 (434-470)||(2078186-2078222)
chr6 (411-470)||(12766472-12766531)
chr6 (412-466)||(4792294-4792348)
chr6 (245-339)||(6586428-6586522)
chr6 (412-462)||(22515971-22516021)
chr6 (414-467)||(30369784-30369837)
chr6 (242-306)||(1252754-1252818)
chr6 (411-470)||(4037035-4037094)
chr6 (412-470)||(1897136-1897194)
chr6 (412-462)||(2017170-2017220)
chr6 (417-467)||(7504883-7504933)
chr6 (412-470)||(14168975-14169033)
chr6 (414-461)||(29874470-29874519)
chr6 (413-470)||(238929-238986)
chr6 (241-306)||(1243372-1243437)
chr6 (414-467)||(2538983-2539036)
chr6 (413-462)||(4793842-4793891)
chr6 (262-307)||(7465510-7465555)
chr6 (434-470)||(10582156-10582192)
[»] scaffold0286 (1 HSPs)
scaffold0286 (412-469)||(20106-20163)
[»] scaffold0633 (1 HSPs)
scaffold0633 (245-327)||(5015-5097)
[»] scaffold0027 (1 HSPs)
scaffold0027 (226-332)||(122457-122563)
[»] scaffold0016 (1 HSPs)
scaffold0016 (413-461)||(199665-199713)
[»] scaffold0854 (2 HSPs)
scaffold0854 (415-470)||(3385-3440)
scaffold0854 (415-462)||(1844-1891)
[»] scaffold2010 (1 HSPs)
scaffold2010 (412-470)||(491-549)
[»] scaffold0001 (1 HSPs)
scaffold0001 (413-470)||(405452-405508)
[»] scaffold0009 (1 HSPs)
scaffold0009 (261-316)||(25585-25640)
[»] scaffold0007 (1 HSPs)
scaffold0007 (411-466)||(201304-201359)
[»] scaffold0005 (1 HSPs)
scaffold0005 (412-462)||(22787-22838)
[»] scaffold1301 (1 HSPs)
scaffold1301 (412-470)||(1305-1363)
[»] scaffold0182 (1 HSPs)
scaffold0182 (412-450)||(21164-21201)
[»] scaffold0028 (2 HSPs)
scaffold0028 (412-470)||(32267-32325)
scaffold0028 (414-470)||(31979-32035)
[»] scaffold0019 (1 HSPs)
scaffold0019 (412-462)||(122595-122645)
[»] scaffold0725 (1 HSPs)
scaffold0725 (413-461)||(6698-6746)
[»] scaffold0246 (1 HSPs)
scaffold0246 (239-339)||(18114-18214)


Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 134 - 467
Target Start/End: Complemental strand, 46896138 - 46895801
Alignment:
Q  134 tttttggaaggagccttaaataaaatagtcgtcgccatgttgtcaactaagcatatttgtatattggaaaatgttaaggagttttctaaggtcattcttt 233  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  46896138 tttttggaaggagctttaaataaaatagtcgtcgctatgttgtcaactaagcatatttgtatattgggaaatgttaatgagttttttaaggtcattcttt 46896039  T
Q  234 acggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaat 333  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46896038 acggactttagatagtaagtttttatagaaatttatgcattcaatgcatcggaaattgaaatattagactttttcaataaataatttcttaatttagaat 46895939  T
Q  334 ccttaac-agtaccttaagaacacctattaac---aaaacccttgtatatttcattgtcgctttgtaatcaatgnnnnnnntaaggcttaattgcagttt 429  Q
    | ||||| ||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||    
T  46895938 ctttaacaagtaccttaggaacacctattaacaaaaaaacccttgtatatttcattgtcgctttgtaatcaacgaaaaaaataaggcttaattgcagttt 46895839  T
Q  430 tgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    || |||||||||||||||||||||||||||||||||||    
T  46895838 tggccccctatgtttcaagaagttgcgattttgacccc 46895801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 339
Target Start/End: Original strand, 19547034 - 19547154
Alignment:
Q  219 ctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataat 318  Q
    |||||| || |||||| |||||||| ||||||||||||||| |||| || ||||||||||| ||||| ||||||| |||| ||| |||||||| ||||||    
T  19547034 ctaagggcactctttaaggactttatatagtaagtttttatagaaacttgtgcattcaatgcatcgggaattgaagtattggacattttcaatgaataat 19547133  T
Q  319 ttcttaatttagaatccttaa 339  Q
    |||||| ||  ||||||||||    
T  19547134 ttcttacttgggaatccttaa 19547154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 337
Target Start/End: Complemental strand, 34582756 - 34582657
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    ||||||||||||||||||||||  ||| |||||||||||||| ||| |||||||||  |||| ||||||||| | |||||||| |||||||| |||||||    
T  34582756 actttagatagtaagtttttatgaaaacttatgcattcaatgcatcagaaattgaagcattatactttttcattgaataattttttaatttaaaatcctt 34582657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 18032276 - 18032190
Alignment:
Q  253 tttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||| |||| ||||||||| |||| |||||||||||||  |||| ||||||||||||||||||||||||||| |||||| ||||    
T  18032276 tttttatggaaacttatgcatttaatgcatcggaaattgaagcattaaactttttcaataaataatttcttaattcagaatctttaa 18032190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 14758697 - 14758572
Alignment:
Q  202 aaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga 301  Q
    ||||||||| ||||  ||||||| || |||||| |||||||| ||||||| |||||||  ||| || ||||||||||| |||| |||||||||| ||| |    
T  14758697 aaatgttaacgagtgctctaaggacactctttaaggactttaaatagtaaatttttatgaaaaattgtgcattcaatgcatcgaaaattgaaatgttaaa 14758598  T
Q  302 ctttttcaataaataatttcttaatt 327  Q
    |||||| ||  |||||||||||||||    
T  14758597 cttttttaaggaataatttcttaatt 14758572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 44584056 - 44584155
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||||||||||||||  ||| || |||||| |||  || | ||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||    
T  44584056 tttagatagtaagtttttatgaaaacttgtgcatttaatacattgaaaattgaaacattagactttttcaacaaatagtttcttaatttagattccttaa 44584155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 327
Target Start/End: Complemental strand, 26297820 - 26297716
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgca---ttcaatggatcggaaattgaaatattagactttttcaataaataatttct 322  Q
    ||||||||| |||||||||||||||||||||||| |||| || ||||   ||| ||| |||||||||||||||||||  |||||||||| |||| ||||     
T  26297820 cattctttaaggactttagatagtaagtttttatagaaacttgtgcattcttctatgcatcggaaattgaaatattaagctttttcaatgaatagtttca 26297721  T
Q  323 taatt 327  Q
    |||||    
T  26297720 taatt 26297716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 3815111 - 3815054
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  3815111 aggcttaatagcagttttgaacccctatgtttcaagaagttgcgattttggcccccta 3815054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 26766063 - 26765978
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaata 316  Q
    |||| |||||||||||||||||||| |||  ||| |||||||||||||  ||| ||||||||||||||| ||||||||||| ||||    
T  26766063 tttaaggactttagatagtaagtttatataaaaacttatgcattcaatccatcagaaattgaaatattaaactttttcaatgaata 26765978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 38294110 - 38294014
Alignment:
Q  239 ctttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaata-ttagactttttcaataaataatttcttaatttagaatc 334  Q
    ||||| ||||||||||||||| |||| || ||||||||||| || ||||||| ||||| ||| |||||||| || || |||||||||||||||||||    
T  38294110 ctttaaatagtaagtttttatagaaacttgtgcattcaatgcattggaaattaaaatatttatactttttctatgaacaatttcttaatttagaatc 38294014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 14890492 - 14890590
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||||| |||  || ||||||| ||||||||||| ||||||||||||| |||||   ||||||||| |||||||| |||||| |||||||||||    
T  14890492 tttagatagtaaatttg-atagaaatttgtgcattcaatgtatcggaaattgaagtattaagttttttcaattaataattttttaattaagaatccttaa 14890590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 415 - 470
Target Start/End: Original strand, 37008218 - 37008273
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  37008218 gcttaatagcagttttggccccctatgtttcaagaagttgcgattttggcccccta 37008273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 12074958 - 12075012
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  12074958 cttaatagcagttttggctccctatgtttcaagaagttgcgattttgacccccta 12075012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 40877057 - 40877003
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  40877057 cttaattgcagttttggccccctatgttccaagaagttgcgattttggcccccta 40877003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 23953160 - 23953111
Alignment:
Q  418 taattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  23953160 taatagcagttttggccccctatgtttcaagaagttgcgattttgacccc 23953111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 327
Target Start/End: Complemental strand, 30529468 - 30529367
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaa 325  Q
    ||||||||| |||||||| ||||||| ||||||| |||| || |||||| |||| ||| ||||||||| | ||| | ||||||||  |||||||||||||    
T  30529468 cattctttaaggactttaaatagtaaatttttatggaaaattgtgcatttaatgcatcagaaattgaagtgttaaattttttcaaagaataatttcttaa 30529369  T
Q  326 tt 327  Q
    ||    
T  30529368 tt 30529367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 44920356 - 44920219
Alignment:
Q  202 aaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga 301  Q
    ||||||||| ||||   |||||| || | |||| |||||| | ||||||| ||||||| |||| || ||||||||||| |||  |||||||| | ||| |    
T  44920356 aaatgttaacgagtgccctaagggcactttttaaggacttgaaatagtaaatttttatggaaaattgtgcattcaatgcatcataaattgaagtgttaaa 44920257  T
Q  302 ctttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| ||| ||||||||||||||| |||| ||||||    
T  44920256 cttttttaatgaataatttcttaattgagaaaccttaa 44920219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 14892041 - 14892139
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||||| |||  || ||||||| || |||||||| ||||||||||||| |||||   ||||||||| |||||||| |||||| |||||||||||    
T  14892041 tttagatagtaaatttg-atagaaatttgtgtattcaatgtatcggaaattgaagtattaagttttttcaattaataattttttaattaagaatccttaa 14892139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 40876700 - 40876747
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  40876700 ggcttaattgcagttttgaccccctatatttcaagaagttgtgatttt 40876747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 12075329 - 12075271
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||||||| ||||||||||||  |||||||||||||||| |||||||    
T  12075329 aaggcttaatagcagttttggccccctatgtttacagaagttgcgattttggcccccta 12075271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 18038996 - 18038894
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcct 336  Q
    ||||||||||| ||| |||||||  |||||| || |||||||| |||||||||||||  |||||| |||||||||  ||  |||||||||| ||||| ||    
T  18038996 gactttagataataattttttatgaaaatttgtgtattcaatgcatcggaaattgaagcattagattttttcaatgcattgtttcttaattcagaatact 18038897  T
Q  337 taa 339  Q
    |||    
T  18038896 taa 18038894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 41649981 - 41649899
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    ||||||| ||||||| |||| |||||||||||||| || |||||||||||| ||| ||||||| ||  |||||||| ||||||    
T  41649981 atagtaaatttttatggaaaattatgcattcaatgcatgggaaattgaaatgttaaacttttttaaggaataattttttaatt 41649899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 461
Target Start/End: Complemental strand, 45719765 - 45719715
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  45719765 taagacttaattgcagttttgacctcctatgttttaagaagttgcgatttt 45719715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 367234 - 367177
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||    
T  367234 aggcttaatagcagttttgatcccctatatttcaagaggttgcgattttggcccccta 367177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 7197026 - 7196969
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||||||| |||||    
T  7197026 aggcttaatagcagtttcgaccccttatgttttaagaagttgcgattttgactcccta 7196969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 9500924 - 9500969
Alignment:
Q  286 aaattgaaatattagactttttcaataaataatttcttaatttaga 331  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||    
T  9500924 aaattgaagtattagactttttcaataaatagtttcttaatttaga 9500969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 15788409 - 15788466
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||    
T  15788409 aggcttaattgcagtttcgacactctatgtttcaagaagttgcgatattggcccccta 15788466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 21258918 - 21258967
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  21258918 aggcttaattgcacttttgaccacctatgttttaagaagttgcgattttg 21258967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 41915837 - 41915780
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||||  ||||||| |||||||||||||||||||||| ||||||    
T  41915837 aggcttaatagcagttttggtcccctatatttcaagaagttgcgattttgatccccta 41915780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 46895437 - 46895486
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttga 463  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  46895437 ggcttaatagcagttttggccccctatatttcaagaagttgcgattttga 46895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 49696981 - 49696932
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  49696981 aaggcttaattgcatttttggccccctatgtttcaagaagttgtgatttt 49696932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 51549455 - 51549406
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  51549455 aggcttaattgcaattttggccccctaagtttcaagaagttgcgattttg 51549406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 7058437 - 7058389
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  7058437 ggcttaatttcacttttggccccctatgtttcaagaagttgcgattttg 7058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 7196676 - 7196724
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  7196676 ggcttaatagcagttttgaccctctatatttcaagaagttgcgattttg 7196724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 26533765 - 26533821
Alignment:
Q  283 cggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||||||  |||||||||||||||  |||||||||||||| |||||||||||    
T  26533765 cggaaattgaaacgttagactttttcaattgataatttcttaattgagaatccttaa 26533821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 366883 - 366942
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||  |||||| ||||||||    
T  366883 taaggcttaatagcagttttggccccctatgttttaagaagttatgattttaacccccta 366942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 413 - 468
Target Start/End: Original strand, 10532214 - 10532269
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccc 468  Q
    ||||||||| ||||||||||||||||| || | | |||||||||||||||||||||    
T  10532214 aggcttaatagcagttttgaccccctaagtattaggaagttgcgattttgaccccc 10532269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 4476257 - 4476199
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| ||| |||| ||| ||||||||||||||||| |||||||    
T  4476257 aaggcttaattgcacttttggccctctatattttaagaagttgcgattttggcccccta 4476199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 6129682 - 6129624
Alignment:
Q  413 aggcttaattgcagttttgac-cccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||||||  |||||||    
T  6129682 aggcttaattgcagttttgacccccctatgttttaagatgttgcgatttttgcccccta 6129624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 50504866 - 50504816
Alignment:
Q  413 aggcttaattgcagtttt-gaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  50504866 aggcttaattgcactttttgaccccctatgttttaagaagttgcgattttg 50504816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 3814759 - 3814816
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||| |||  |||||||||||||||||||||| ||||||| |||||||    
T  3814759 aggcttaatagcagatttagccccctatgtttcaagaagttgtgattttggcccccta 3814816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 6983018 - 6983095
Alignment:
Q  262 aaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||| || ||||| || | ||||||||||||| |||| ||| ||| |||||||||||||||| |||| |||||    
T  6983018 aaatttatgtatccaatgcattgaaaattgaaatatttgactcttttaatgaataatttcttaatttggaatacttaa 6983095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 24491154 - 24491211
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||||| |||| |||| | ||| |||||||||| |||||||||||||||||||||    
T  24491154 aaggcttaaatgcactttttatcccttatgtttcaaaaagttgcgattttgaccccct 24491211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 25095675 - 25095610
Alignment:
Q  274 tcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| |||| ||||||||||||| |||||||| |  ||||||||||||  ||||||||||||||    
T  25095675 tcaatgcatcgaaaattgaaatatttgacttttttatgaaataatttcttcttttagaatccttaa 25095610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 50503700 - 50503757
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| || |||||  ||||||||||| ||||||||||||||||| |||||||    
T  50503700 aggcttaatttcacttttggtcccctatgttttaagaagttgcgattttggcccccta 50503757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 2350150 - 2350094
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||  ||||||||  || |||||||| |||||||||||||||||||||||||    
T  2350150 ggcttaataacagttttggtcctctatgttttaagaagttgcgattttgacccccta 2350094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 7159507 - 7159555
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| |||||||||||||| |||| | ||||||||||||||    
T  7159507 ggcttaattgcacttttgaccccctatctttccaaaagttgcgattttg 7159555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 15912016 - 15911960
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| |||||||||||||| |||  | |||||||||||||| |||||||    
T  15912016 ggcttaattgcacttttgaccccctattttttcaaaagttgcgattttggcccccta 15911960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 46729283 - 46729219
Alignment:
Q  229 tctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaa 293  Q
    |||||| |||||||| ||||||| ||||||| |||| || ||||||||||| ||||||| |||||    
T  46729283 tctttaaggactttaaatagtaaatttttatggaaaattgtgcattcaatgcatcggaatttgaa 46729219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 35580736 - 35580791
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||| ||||| |||||||| |||| | |||||||||||||| ||||    
T  35580736 aaggcttaattgcacttttggccccctatctttccaaaagttgcgattttggcccc 35580791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 1712368 - 1712418
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||| |||||||||||||| |||  | ||||||||||||||    
T  1712368 aaggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttg 1712418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 39276964 - 39277014
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||| ||||||||| ||||||||| |||||||| || ||||||||||||||    
T  39276964 aaggattaattgcacttttgaccctctatgtttaaaaaagttgcgattttg 39277014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 44743773 - 44743731
Alignment:
Q  424 cagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||    
T  44743773 cagttttggcccccaatgtttccagaagttgcgattttgaccc 44743731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 4474757 - 4474802
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||| ||||| |||||||||||| |||||||||| |||||    
T  4474757 cttaattgcacttttggccccctatgttttaagaagttgcaatttt 4474802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 460
Target Start/End: Complemental strand, 11932983 - 11932934
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattt 460  Q
    ||||||||||||||| ||| | || |||||||||||||||||||| ||||    
T  11932983 taaggcttaattgcaatttcggcctcctatgtttcaagaagttgcaattt 11932934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 26811452 - 26811501
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| |||||||||||||| |||  | ||||||||||||||    
T  26811452 aggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttg 26811501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 36331618 - 36331687
Alignment:
Q  270 gcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||| || | |||||||| ||||  |||||||||||||| | ||||||||||  ||||||||||    
T  36331618 gcattcaatgaattgaaaattgaattatttaactttttcaataaacattttcttaattaggaatccttaa 36331687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 41611244 - 41611297
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||| |||||||| |||| | |||||||||||||| |||||||    
T  41611244 ttaattgcacttttggccccctatttttccaaaagttgcgattttggcccccta 41611297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Original strand, 43117258 - 43117303
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||| ||||||||  || |||||||||||||||||||||||||||    
T  43117258 ttaatagcagttttagccacctatgtttcaagaagttgcgattttg 43117303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 51462180 - 51462228
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||| | ||||| |||| |||||||||||||||||||||||||    
T  51462180 aggcttaattgtacttttggcccc-tatgtttcaagaagttgcgattttg 51462228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 4059519 - 4059579
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||| || |||| ||||  ||||||||||||||| | |||||||||||| ||||||||    
T  4059519 taaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctat 4059579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 12061586 - 12061634
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||||||| |||| |||| | ||||||||||||||    
T  12061586 ggcttaattgcacttttgaccctctatctttccaaaagttgcgattttg 12061634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 49695350 - 49695406
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| |||||  || |||| ||| ||||||||||||||||| |||||||    
T  49695350 ggcttaattgcacttttggtcctctatattttaagaagttgcgattttggcccccta 49695406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 11010365 - 11010248
Alignment:
Q  219 ctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataat 318  Q
    |||||| |||| |||| |||||| |||||||| |||||||| |||| || || |||||||| ||| ||||||||| ||||||||||||||||| |||| |    
T  11010365 ctaagggcattttttaaggacttcagatagtatgtttttatggaaagttgtgtattcaatgcatcagaaattgaagtattagactttttcaatgaatagt 11010266  T
Q  319 ttcttaatttagaatcct 336  Q
    ||||||||||||||||||    
T  11010265 ttcttaatttagaatcct 11010248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 40944271 - 40944369
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcct 336  Q
    |||||||||||||| ||||||| ||||||| | ||||||||| |||| ||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  40944271 actttagatagtaaatttttatggaaatttgtacattcaatgcatcgaaaattgaagcattatactttttcaatgaataatttcttaatttagaatcct 40944369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 42585985 - 42586042
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42585985 aggcttaatagcagttttggccccctatgtttcaagaagttgcgattttgacccccta 42586042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 22472012 - 22471954
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  22472012 aaggcttaattgcacttttgacctcctatgttacaagaagttgcgattttgacccccta 22471954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 6464390 - 6464333
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6464390 aggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggcccccta 6464333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 36361032 - 36361089
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  36361032 aggcttaattgcagttttggtcccctatgtttcaagaagttgcgattttgatccccta 36361089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 128252 - 128302
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  128252 aaggcttaatagcagttttgaccccctatgtttcaagaagttgcaattttg 128302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 20126437 - 20126494
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||    
T  20126437 aggcttaataggagttttggccccctatgtttcaagaagttgtgattttgacccccta 20126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 42877385 - 42877252
Alignment:
Q  199 ggaaaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatatt 298  Q
    |||||||||||| |||| |||||||| || ||||||  ||||||| ||||||| ||||||| |||| || || |||||||  || | |||||||||| ||    
T  42877385 ggaaaatgttaacgagtattctaagggcactctttaaagactttaaatagtaaatttttatggaaaattgtgtattcaatacattgaaaattgaaatttt 42877286  T
Q  299 agactttttcaataaataatttcttaatttagaa 332  Q
    | |||||||  || |||||||||| |||| ||||    
T  42877285 aaacttttttcatgaataatttctcaattgagaa 42877252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 248447 - 248567
Alignment:
Q  220 taaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagac-tttttcaataaataat 318  Q
    ||||| || |||||| |||||| | ||||||| ||||||| |||| || ||||||||||  ||||||||||||| | ||| || ||||| || |||||||    
T  248447 taagggcactctttaaggacttgaaatagtaaatttttatggaaaattgtgcattcaatacatcggaaattgaagtgttaaacttttttaaagaaataat 248546  T
Q  319 ttcttaatttagaatccttaa 339  Q
    ||||||||| |||| ||||||    
T  248547 ttcttaattgagaaaccttaa 248567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 20364681 - 20364738
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| ||||||| || ||| |||||||||||||||||||||||    
T  20364681 aggcttaatagcagttttgtccccctaagtatcaggaagttgcgattttgacccccta 20364738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 38162592 - 38162641
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  38162592 aggcttaattgcacttttggccccctatgtttcaagaagttgtgattttg 38162641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 467
Target Start/End: Original strand, 7611071 - 7611127
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||| |||||||||||| || |||||||||| ||||||||||||||||| ||||    
T  7611071 taaggctcaattgcagttttaactccctatgttttaagaagttgcgattttggcccc 7611127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 18988862 - 18988786
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagacttttt 307  Q
    |||| |||| ||||||||||| |||||||  ||| |||||||||||||| || ||||||| || |||||||||||||    
T  18988862 tttaaggacattagatagtaaatttttatgaaaacttatgcattcaatgcattggaaatttaagtattagacttttt 18988786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 42586403 - 42586345
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||||||| ||||| ||||||  |||||||||||||||| |||||||    
T  42586403 aaggcttaatagcagttttggccccccatgtttacagaagttgcgattttggcccccta 42586345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 463
Target Start/End: Original strand, 43355721 - 43355767
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttga 463  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  43355721 ttaatagcagttttgacctcctatatttcaagaagttgcgattttga 43355767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 20126713 - 20126676
Alignment:
Q  433 ccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| |||||||||||||||||||||||||    
T  20126713 ccccctatgttttaagaagttgcgattttgacccccta 20126676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 324
Target Start/End: Original strand, 22528740 - 22528821
Alignment:
Q  243 agatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttctta 324  Q
    |||| |||| |||||||  ||||||||| ||| |||| |||||||||||||  || | ||||||||||| ||||||||||||    
T  22528740 agattgtaaatttttatgaaaatttatgtatttaatgtatcggaaattgaagcatcaaactttttcaatgaataatttctta 22528821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 16980876 - 16980752
Alignment:
Q  202 aaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga 301  Q
    ||||| ||| |||| | |||||| || ||||||  ||||||| ||||||  |||||||  ||| |||| ||||||||| ||||||||||||| | ||| |    
T  16980876 aaatgctaacgagtatcctaaggacactctttaaagactttaaatagtacatttttatgaaaaattatacattcaatgtatcggaaattgaagtgttaaa 16980777  T
Q  302 ctttttcaata-aataatttcttaa 325  Q
    |||| |||| | |||||||||||||    
T  16980776 ctttctcaaaagaataatttcttaa 16980752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 26366137 - 26366085
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||  ||||| |||||||||||||||||||||| ||||||| ||||    
T  26366137 gcttaattgcgcttttggccccctatgtttcaagaagttgtgattttggcccc 26366085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 36361478 - 36361422
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||  |||||| |||||||| ||| ||||||||||||||||| ||||    
T  36361478 taaggcttaattggcgttttggccccctatattttaagaagttgcgattttggcccc 36361422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26663691 - 26663636
Alignment:
Q  284 ggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| |||||||| |||||||| || ||||||||||||| |||||||| |||||    
T  26663691 ggaaatcgaaatatttgacttttttaaaaaataatttcttattttagaatgcttaa 26663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26935286 - 26935231
Alignment:
Q  284 ggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| |||||||| |||||||| || ||||||||||||| |||||||| |||||    
T  26935286 ggaaatcgaaatatttgacttttttaaaaaataatttcttattttagaatgcttaa 26935231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 38163732 - 38163673
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| ||||||||| ||||| || ||||| ||| ||||||||||||||||| |||||||    
T  38163732 taaggtttaattgcacttttggcctcctatattttaagaagttgcgattttggcccccta 38163673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 3999084 - 3999142
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||| ||||| ||||||||  |||||||  ||||| |||||||||||||||||||||||    
T  3999084 aaggtttaatagcagttttcgccccctaactttcacgaagttgcgattttgacccccta 3999142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 7611478 - 7611428
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||| |||||||||||||||||||| || ||||||| |||||| ||||    
T  7611478 ttaattgtagttttgaccccctatgttttaaaaagttgcaattttggcccc 7611428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 10331955 - 10332009
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||||| |||||||||||||| |||  | |||||||||||||| ||||    
T  10331955 aggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttggcccc 10332009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 13428188 - 13428138
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||| ||||||||| |||||||| ||| |||||||||| |||||||||||    
T  13428188 ttaatagcagttttggccccctatattttaagaagttgcaattttgacccc 13428138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 38973326 - 38973383
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| |||||||||||| ||||| ||| ||||||| |||||||    
T  38973326 aaggcttaattgcacttttggccccctatgttttaagaaattg-gattttggcccccta 38973383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 39049016 - 39049070
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||||||||||| ||| |||| |||  | |||||||||||||||||||    
T  39049016 aggcttaattgcagttttggccctctatcttttcaaaagttgcgattttgacccc 39049070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 15204344 - 15204288
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| |||||||||| ||  |||| | ||||||||||||||||||||||    
T  15204344 aggcttaattgcacttttgacccc-taactttctaaaagttgcgattttgacccccta 15204288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 24242016 - 24242073
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| || ||||||||||||||||||  |||||  ||| ||||||||||||||||||    
T  24242016 aggctaaactgcagttttgaccccctaactttcacaaaggtgcgattttgacccccta 24242073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 35947745 - 35947644
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| ||||||||  ||||| ||||||| || |||| ||| |||| ||||||||||||||   |||| |||| |||| |||||| ||| || ||||||    
T  35947745 actttaaatagtaagggtttatagaaatttgtgaattctatgcatcgaaaattgaaatattaagtttttccaatgaatagtttcttgattgagtatcctt 35947646  T
Q  338 aa 339  Q
    ||    
T  35947645 aa 35947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 37887671 - 37887720
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| |||||||||||||| |||  | ||||||||||||||    
T  37887671 aggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttg 37887720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 42265538 - 42265437
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| ||||||||||||| |  || |||||| | |||||| || | |||||||||| || |||||||| ||  |||||||| || ||| |||||||||    
T  42265538 actttatatagtaagtttttgtctaagtttatgaaatcaatgcattgaaaattgaaatttttgacttttttaaagaataatttttttattaagaatcctt 42265439  T
Q  338 aa 339  Q
    ||    
T  42265438 aa 42265437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 4857329 - 4857273
Alignment:
Q  271 cattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    ||||||||| |||| ||||| |||| ||| ||||||||||  |||||||||||||||    
T  4857329 cattcaatgtatcgaaaattaaaatgttaaactttttcaaagaataatttcttaatt 4857273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 6815500 - 6815556
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||| |||  | ||||||||||||| ||||||||    
T  6815500 ggcttaattgcacttttggccccctatcttttcaaaagttgcgattttaacccccta 6815556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 14328455 - 14328503
Alignment:
Q  250 aagtttttattgaaatttatgcattcaatggatcggaaattgaaatatt 298  Q
    ||||||||||  |||||||||||||||||| |||| |||||||| ||||    
T  14328455 aagtttttataaaaatttatgcattcaatgaatcgaaaattgaattatt 14328503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 15206500 - 15206568
Alignment:
Q  239 ctttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagacttttt 307  Q
    ||||| ||| ||| |||||||  |||||| ||||||||||| |||| |||||||| |||| ||||||||    
T  15206500 ctttaaataataattttttatgaaaatttgtgcattcaatgaatcgaaaattgaagtattggacttttt 15206568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 471
Target Start/End: Original strand, 15885135 - 15885187
Alignment:
Q  419 aattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||| |||| ||||| || ||||||| |||||||||||||||| ||||||    
T  15885135 aattgcacttttcaccccttaagtttcaaaaagttgcgattttgacaccctat 15885187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 16900994 - 16901054
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||| || |||| ||||  || |||||||||||| | |||||||||||||||||||||    
T  16900994 taaggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctat 16901054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 17441211 - 17441155
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||| |||| |||| | ||||| |||||||| |||||||||||||| ||||||    
T  17441211 aggcttaaatgcacttttcatcccctgtgtttcaaaaagttgcgattttggccccct 17441155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 31874166 - 31874118
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||| |||| |||| | |||||||||||||| |||||||||||||    
T  31874166 aggcttaaatgcatttttcatcccctatgtttcaaaaagttgcgatttt 31874118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 332
Target Start/End: Original strand, 21813119 - 21813254
Alignment:
Q  197 ttggaaaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaata 296  Q
    |||||||||||||| |||| | |||||| || |||||| ||| |||| ||||||| ||||||| |||| |||||||||||||| ||||||| || || |     
T  21813119 ttggaaaatgttaatgagtgtcctaagggcactctttaaggattttaaatagtaaatttttatggaaaattatgcattcaatgcatcggaatttaaagtg 21813218  T
Q  297 ttagactttttcaataaataatttcttaatttagaa 332  Q
    ||| ||||||||||| ||||||||||||||| ||||    
T  21813219 ttaaactttttcaatgaataatttcttaattgagaa 21813254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 29212803 - 29212701
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcct 336  Q
    ||||||||||| ||| ||||||| |||| || ||||||||||  |||  ||||||||  |||||||||||||||| |||| |||||||||||| ||||||    
T  29212803 gactttagatattaaatttttatagaaacttgtgcattcaatacatcataaattgaagcattagactttttcaatgaatagtttcttaatttaaaatcct 29212704  T
Q  337 taa 339  Q
    |||    
T  29212703 taa 29212701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 3193096 - 3193039
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||    
T  3193096 aggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgacccccta 3193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 17258245 - 17258196
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  17258245 aggcttaattgcacttttggccccctatgtttcaagaagttgcgattttg 17258196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 33944924 - 33944867
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  33944924 aggcttaattgcacttttggccctctatgtttcaagaagttgcgattttgaaccccta 33944867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 36494273 - 36494176
Alignment:
Q  243 agatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga-ctttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||||||||||| |||| || ||||||||||  || |||||||||| |||||||  ||||||||| |||| ||||||||||  ||||||||||    
T  36494273 agatagtaagtttttatggaaacttgtgcattcaatacattggaaattgaagtattagatttttttcaatgaatagtttcttaattgggaatccttaa 36494176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 40629214 - 40629093
Alignment:
Q  218 tctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataa 317  Q
    ||||||| |||||||||   |||||||||| |||| ||||||  ||| || |||||| |||| ||| ||||||  || |||||| ||||||||||||||     
T  40629214 tctaagggcattctttaaaaactttagataataagattttataaaaacttgtgcatttaatgtatcagaaattagaacattagattttttcaataaatat 40629115  T
Q  318 tttcttaatttagaatccttaa 339  Q
    ||| |||||| |||||||||||    
T  40629114 ttttttaattgagaatccttaa 40629093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 54476042 - 54476099
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||    
T  54476042 aggcttaattgcacttttggccccctatattttaagaagttgcgattttgacccccta 54476099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 2181315 - 2181363
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  2181315 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttg 2181363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 49682276 - 49682180
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||| |||||||| ||||||| ||||||| |||| || |||||||||||  |||||||||||||| ||| ||||||| ||  |||||||| ||||||    
T  49682276 tttaaggactttaaatagtaaatttttatagaaaattgtgcattcaatgcttcggaaattgaaatgttaaacttttttaaggaataattttttaatt 49682180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 37755250 - 37755195
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||    
T  37755250 gcttaattgcagttttggccccctatgtttcatgaagttgcgattttagcccccta 37755195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 40988595 - 40988646
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  40988595 taaggcttaattgcacttttggctccctatgtttcaagaagttgcgattttg 40988646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 5636723 - 5636673
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  5636723 aaggtttaattgcacttttgacctcctatgtttcaagaagttgcgattttg 5636673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 51453544 - 51453597
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  51453544 cttaatagcagttttgacccc-tatgttttaagaagttgcgattttgacccccta 51453597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 50380154 - 50380211
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||||||||| |||||||    
T  50380154 aggcttaattgcacttttggccctctatgttttaagaagttgcgattttggcccccta 50380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 51224925 - 51224982
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||| |||||| ||||| || ||||||||||||||||||||||||||| |||||||    
T  51224925 aggcttgattgcacttttggcctcctatgtttcaagaagttgcgattttggcccccta 51224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 53255339 - 53255282
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| || ||||||||| ||||||||||||||||| |||||||    
T  53255339 aggcttaatagcagttttggcctcctatgttttaagaagttgcgattttggcccccta 53255282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 53254963 - 53255011
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  53254963 ggcttaataacagttttggccccctatgtttcaagaagttgcgattttg 53255011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 32770648 - 32770699
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||||||||    
T  32770648 taaggcttaattgcgtttttggtcccctatgtttcaagaagttgcgattttg 32770699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 33445781 - 33445824
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgatt 459  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  33445781 cttaattgcacttttgaccctctatgtttcaagaagttgcgatt 33445824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 454
Target Start/End: Complemental strand, 40989715 - 40989672
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttg 454  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  40989715 taaggcttaattgcacttttggccccctatgtttcaagaagttg 40989672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 466
Target Start/End: Complemental strand, 46336098 - 46336043
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||||| |||||||||| ||||||| ||| ||||| |||||||||||||||    
T  46336098 taaggcttaatagcagttttgatcccctatattttaagaaattgcgattttgaccc 46336043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 17256570 - 17256624
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||| |||||||| |||||||||||||| |||||| |||||||    
T  17256570 cttaattgcacttttggccccctatatttcaagaagttgcaattttggcccccta 17256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 327
Target Start/End: Original strand, 32606385 - 32606475
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    ||||||| ||| ||| |||||||  ||| |||||||||||||| ||||||||||||||| |||   |||||||| | ||||||| ||||||    
T  32606385 gactttaaataataaatttttatgaaaaattatgcattcaatgcatcggaaattgaaatgttaacttttttcaaaatataattttttaatt 32606475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 50764246 - 50764197
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  50764246 aaggcttaattgcacttttgacccc-tatgttttaagaagttgcgattttg 50764197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 7278169 - 7278270
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| ||||||||||||||| |||| || |||||| |||| || |||||| |||||||||  |||||  ||| |||| |||| ||||| || ||||||    
T  7278169 actttaaatagtaagtttttatcgaaacttgtgcattgaatgcattggaaatcgaaatattaagcttttctaatgaatagtttcgtaattgagtatcctt 7278268  T
Q  338 aa 339  Q
    ||    
T  7278269 aa 7278270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 10732463 - 10732414
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||||||||||    
T  10732463 aaggtttaattgcacttttggccccttatgtttcaagaagttgcgatttt 10732414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 39145054 - 39144981
Alignment:
Q  254 ttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||| |||| |||||||||||||| ||||||||||||| | ||| | ||||| || ||| ||||||||||||    
T  39145054 ttttatagaaaattatgcattcaatgcatcggaaattgaagtgttaaaattttttaaaaaacaatttcttaatt 39144981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 42686485 - 42686538
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| |||||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  42686485 ttaatagcagttttaacctcctaagtttcaaaaagttgcgattttgacccccta 42686538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 44457502 - 44457445
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||||| |||| |||| ||| |||||||||||| |||||||||||||| ||||||    
T  44457502 aaggcttaaatgcatttttcacctcctatgtttcaaaaagttgcgattttggccccct 44457445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 48907292 - 48907349
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| || |||| ||||||||||||||||||||| | |||| |||||||||||||||    
T  48907292 aggctaaagtgcacttttgaccccctatgtttcaaaatgttgtgattttgacccccta 48907349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 50381621 - 50381572
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||| ||||||| ||||| | ||||||||||||||||||||||||||||    
T  50381621 aggctcaattgcacttttggctccctatgtttcaagaagttgcgattttg 50381572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 33447285 - 33447237
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| |||||  ||||||||||| |||||||||||||||||    
T  33447285 ggcttaattgcacttttggtcccctatgttttaagaagttgcgattttg 33447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 35495261 - 35495213
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| |||| ||| |||||||||||||||||||||    
T  35495261 ggcttaattgcacttttggccccttatatttcaagaagttgcgattttg 35495213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 43040499 - 43040443
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||| |||| |||| ||  |||||||||||| |||||||||||||||||||||    
T  43040499 aggcttaaatgcacttttcacttcctatgtttcaaaaagttgcgattttgaccccct 43040443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 3383427 - 3383356
Alignment:
Q  249 taagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataattt 320  Q
    |||| ||||||||||||||||  |||||||| ||| ||||||||| |||| |||||||| ||| || |||||    
T  3383427 taagattttattgaaatttatatattcaatgtatcagaaattgaagtatttgacttttttaatgaacaattt 3383356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 32831161 - 32831208
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||| ||||||||| ||||||||||||||||||||| | ||||||    
T  32831161 gcttaatagcagttttggccccctatgtttcaagaagttacaattttg 32831208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 470
Target Start/End: Original strand, 33943535 - 33943590
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||||| |||| ||||||| |||||||| ||||||||| ||||||    
T  33943535 gcttaattgcacttttggccccttatgttttaagaagtttcgattttgatccccta 33943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 36315790 - 36315837
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||  |||| ||| ||||||||||||||||||||||||||    
T  36315790 gcttaattgcacctttggcccactatgtttcaagaagttgcgattttg 36315837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 46895927 - 46896002
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataattt 320  Q
    |||||||||||||||  |||||||||||||||||| |||  |||||||| | ||  ||||||||  ||||||||||    
T  46895927 atagtaagtttttataaaaatttatgcattcaatgcatcaaaaattgaagtctttaactttttctttaaataattt 46896002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 53040525 - 53040470
Alignment:
Q  284 ggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||| |||| || ||||| ||  |||||||||||||||||||||||||||    
T  53040525 ggaaattgaagtatttgaattttttaaataataatttcttaatttagaatccttaa 53040470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 1807488 - 1807438
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||| ||||||||| |||||||| ||| ||||| |||||||||||    
T  1807488 aaggcttaatagcagttttggccccctatattttaagaatttgcgattttg 1807438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 6128562 - 6128512
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||| ||||||||| ||| |||| ||| ||||||||||||||||||||||    
T  6128562 ttaatagcagttttggcccactatattttaagaagttgcgattttgacccc 6128512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 471
Target Start/End: Original strand, 8338959 - 8338997
Alignment:
Q  433 ccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  8338959 ccccctatgtttcaaaatgttgcgattttgaccccctat 8338997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 31294441 - 31294383
Alignment:
Q  269 tgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    ||||||||||| |||||||||| || | ||| ||||||||||  |||||||||||||||    
T  31294441 tgcattcaatgcatcggaaattaaagtgttaaactttttcaaagaataatttcttaatt 31294383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 54477385 - 54477335
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||| ||||||||| ||||| |||||||||||| ||||||||| |||||||    
T  54477385 aaggattaattgcacttttggccccctatgttttaagaagttgtgattttg 54477335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 2831601 - 2831548
Alignment:
Q  286 aaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||||||| |||||| | || |||||||||||| |||| ||||||||||    
T  2831601 aaattgaaatatttgactttattaaaaaataatttcttgatttggaatccttaa 2831548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 3355000 - 3354951
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| |||| |||| ||||||| || |||||||||||||||||||    
T  3355000 aggcttaatagcagatttggccccctaagtatcaagaagttgcgattttg 3354951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 25095533 - 25095464
Alignment:
Q  259 ttgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaattt 328  Q
    |||||||||||| |||||||| |||  |||||||| ||   || |||||||||||||||||| |||||||    
T  25095533 ttgaaatttatgtattcaatgaatcataaattgaagtaactgattttttcaataaataattttttaattt 25095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 28204479 - 28204536
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||  |||| ||  ||||| |||||||||||||||||||||||    
T  28204479 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttgacccccta 28204536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 46934302 - 46934245
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||| |||| | ||||||||||| || |||||||    
T  46934302 aggcttaattgcacttttggccccctatctttccaaaagttgcgattatggcccccta 46934245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 49001649 - 49001706
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| | ||||| ||| |||||||| ||||| |||||||||||||| ||||    
T  49001649 aggcttaattgtacttttggccctctatgttttaagaaattgcgattttgacctccta 49001706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 49002816 - 49002767
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||| ||| |||  |||||||||||||||||||||    
T  49002816 aggcttaattgcacttttggccctctaattttcaagaagttgcgattttg 49002767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 51226561 - 51226516
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| |||||  ||||||||||| |||||||||||||||||    
T  51226561 ttaattgcacttttggtcccctatgttttaagaagttgcgattttg 51226516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 53764573 - 53764622
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||||||| ||||| |||||||| |||| | |||||||||||||    
T  53764573 aaggcttaattgcacttttggccccctatctttccaaaagttgcgatttt 53764622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 54716475 - 54716532
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||| |||  | |||||| |||||||||||||||    
T  54716475 aggcttaattgcacttttggccccctatcttttcaaaagttgtgattttgacccccta 54716532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 3973922 - 3973826
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||| |||||| | ||||||| ||||||| |||| || |||||| |||| |||||||||||||   ||  ||||||| ||  |||||||||||||||    
T  3973922 tttaaggacttgaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagcgttgaacttttttaaggaataatttcttaatt 3973826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 5635348 - 5635404
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||| | ||||||||||||||||| ||||  |||||| |||||||    
T  5635348 ggcttaattgcactttcggccccctatgtttcaagatgttgtcattttggcccccta 5635404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 19975603 - 19975547
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||||| || ||||||||||||| |||| |  |||||| ||||||||||||||    
T  19975603 aggcttaattacacttttgaccccctaagttttataaagttgtgattttgaccccct 19975547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 32772094 - 32772046
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||  | ||||| |||||||||||||||||||||| |||||||    
T  32772094 ggcttaattatacttttggccccctatgtttcaagaagttgtgattttg 32772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 49075618 - 49075562
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaag-aagttgcgattttgacccccta 470  Q
    ||||||||||| ||||||||| |||||||| ||| |||||| ||||||| |||||||    
T  49075618 gcttaattgcacttttgaccctctatgttttaagaaagttgtgattttggcccccta 49075562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 12787948 - 12787849
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||||||||||||||  |||||| |||||| |||| || ||||||||||  |||| |||||||||||||||||||| |||||||||||| |||||    
T  12787948 tttagatagtaagtttttatgaaaatttgtgcatttaatgaattggaaattgaagcattatactttttcaataaataattttttaatttagaattcttaa 12787849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 10565448 - 10565346
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcct 336  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||  |||  ||||| || ||||||||||||||||| |||| |||||||||||||||| ||    
T  10565448 gactttagatagtaaatttttatggaaatttgtgcattcaatacatcaaaaattaaagtattagactttttcaatgaatagtttcttaatttagaattct 10565349  T
Q  337 taa 339  Q
    |||    
T  10565348 taa 10565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 44042637 - 44042538
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||| ||||||||||||||| ||||||| ||||||||||| || |||||||||| ||||  ||||||||||| |||| ||||||||||  ||||||||||    
T  44042637 tttaaatagtaagtttttatagaaatttgtgcattcaatgcattggaaattgaagtattgaactttttcaatgaatagtttcttaattatgaatccttaa 44042538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 4166598 - 4166496
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcct 336  Q
    |||||||||||  |||||||||| |||| || ||||||||||| || |||||||||||||||  ||||||||||| ||||||||||| |||  |||||||    
T  4166598 gactttagatataaagtttttatggaaacttgtgcattcaatgtattggaaattgaaatattgaactttttcaatgaataatttcttgattatgaatcct 4166499  T
Q  337 taa 339  Q
    |||    
T  4166498 taa 4166496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 14170420 - 14170478
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  14170420 aaggcttaattgcagttttgaccccctatgttttaagaagttgcgattttggcccccta 14170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 23475622 - 23475677
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  23475622 aaggcttaattgcagttttggccccctatgtttcaagaagttgtgattttgacccc 23475677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 35795648 - 35795589
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  35795648 taaggcttaattgcagttttggccccctatgtttcaagaagttgtgattttggcccccta 35795589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 463
Target Start/End: Original strand, 27225778 - 27225830
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttga 463  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  27225778 taaggtttaattgcagttttgaccccctatgttttaagaagttgcgattttga 27225830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 45308454 - 45308510
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  45308454 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttgaaccccta 45308510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 755901 - 755959
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  755901 aaggcttaatagcagttttggccctctatgtttcaagaagttgcgattttggcccccta 755959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 35795219 - 35795273
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  35795219 cttaattgcagttttggccccctatgtttcaaaaagttgcaattttgacccccta 35795273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 4507917 - 4508006
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    ||||||||| |||||||||||| |||| ||| ||||| |||| ||| ||||||||||||| |   |||||||||||||| ||||||||||    
T  4507917 actttagatggtaagtttttatggaaacttacgcatttaatgcatcagaaattgaaatatgatgttttttcaataaatagtttcttaatt 4508006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 17512096 - 17512153
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||| |||||||    
T  17512096 aggcataattgcagttttggccccctatatttcaagaagttgcgattttggcccccta 17512153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 23936282 - 23936335
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  23936282 ttaattgcacttttggccccctatgtttcaagaagttgcgattttggcccccta 23936335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 24457929 - 24457828
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| |||||||||||||||  ||| || ||| || |||| ||  |||||||||| |||||||||||||||| |||| ||| |||||||||| |||||    
T  24457929 actttaaatagtaagtttttatgaaaacttgtgcttttaatgcatttgaaattgaaacattagactttttcaatgaatagttttttaatttagattcctt 24457830  T
Q  338 aa 339  Q
    ||    
T  24457829 aa 24457828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 6904271 - 6904192
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaata 316  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||| |||||||||||||  |||| ||||||||||| ||||    
T  6904271 gactttagatagtaattttttatggaaacttgtgcgttcaatgcatcggaaattgaagcattaaactttttcaatgaata 6904192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 26889292 - 26889351
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctatg 472  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||| |||||||||| |||||    
T  26889292 aggcttaatagcagttttggccccctatgtttccagaagttgcaattttgaccctctatg 26889351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 459
Target Start/End: Complemental strand, 17512501 - 17512456
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgatt 459  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  17512501 ggcttaattgcagttttgatcccctatatttcaagaagttgcgatt 17512456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 327
Target Start/End: Original strand, 20142403 - 20142532
Alignment:
Q  198 tggaaaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatat 297  Q
    ||||||||||||| |||| |||| ||  |||| |||| |||||||| ||| ||| ||||||| | || || |||||| |||| |||| ||||| || | |    
T  20142403 tggaaaatgttaacgagtattcttagagcattatttaaggactttaaataataaatttttatgggaaattgtgcatttaatgcatcgaaaattaaagtgt 20142502  T
Q  298 tagactttttcaataaataatttcttaatt 327  Q
    || ||||||| || ||||||||||||||||    
T  20142503 taaactttttaaaaaaataatttcttaatt 20142532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 45522506 - 45522449
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||  |||||||    
T  45522506 aggcttaaaagcagttttgaccccctatgttttaagaagttgcgattttagcccccta 45522449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 6041089 - 6041141
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||  |||||||| ||||||||||||||||||||| ||||||||||||    
T  6041089 ggcttaataacagttttggccccctatgtttcaagaagttacgattttgaccc 6041141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 6044721 - 6044773
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||  |||||||| ||||||||||||||||||||| ||||||||||||    
T  6044721 ggcttaataacagttttggccccctatgtttcaagaagttacgattttgaccc 6044773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 14237242 - 14237162
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttt 306  Q
    ||||||||| |||||||| ||||||| ||||||| |||| || |||||| |||| ||||||||||||| | ||| ||||||    
T  14237242 cattctttaaggactttaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagtgttaaactttt 14237162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 11289362 - 11289315
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatt 459  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||    
T  11289362 aaggcttaatagcagctttggccccctatgtttcaagaagttgcgatt 11289315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 12278832 - 12278883
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||||||||    
T  12278832 taaggcttaattgtacttttggccccctatgttttaagaagttgcgattttg 12278883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 34602014 - 34602069
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||| |||| |||| |||||||||||||||| |||||||||||||| ||||||    
T  34602014 ggcttaaatgcacttttcaccccctatgtttcaaaaagttgcgattttggccccct 34602069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 39312194 - 39312245
Alignment:
Q  272 attcaatggatcggaaattgaaatattagactttttcaataaataatttctt 323  Q
    |||||||| ||||||||||||| ||||| ||||||||||| |||||||||||    
T  39312194 attcaatgcatcggaaattgaagtattaaactttttcaatgaataatttctt 39312245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 45163761 - 45163718
Alignment:
Q  427 ttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  45163761 ttttggccccctatgtttcaagaagttgcgattttggcccccta 45163718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 5916348 - 5916394
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||    
T  5916348 gcttaattgcacttttgacctcctatgtttcaaaaagttgcgatttt 5916394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 12280413 - 12280359
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||||||  |||||||| ||||||||||||||||| |||||||    
T  12280413 cttaattgcacttttgaccttctatgttttaagaagttgcgattttggcccccta 12280359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 18650929 - 18650979
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||| |||||| || ||||| ||||||||||||||||||||||||||||||    
T  18650929 aaggtttaattacacttttggccccctatgtttcaagaagttgcgattttg 18650979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 44807390 - 44807332
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||||||||||| |||  | |||||||||||||| |||||||    
T  44807390 aaggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttggcccccta 44807332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 756172 - 756123
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| ||||||||| | |||||||||| |||||||||||||||||    
T  756172 aggcttaatagcagttttggctccctatgttttaagaagttgcgattttg 756123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 462
Target Start/End: Original strand, 2802651 - 2802696
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||    
T  2802651 ttaatagcagttttgaccccctatgtattaagaagttgcgattttg 2802696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 2803063 - 2803006
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||||| |||||||||||  ||||||||| |||||| |||||||    
T  2803063 aggcttaatagcagttttgatcccctatgtttacagaagttgcaattttggcccccta 2803006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 5180694 - 5180751
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||||||||||||||||  | ||| ||| |||||||||||||| ||||    
T  5180694 aggcttaattgcagttttgaccccctaactatcatgaacttgcgattttgacctccta 5180751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 7010926 - 7010979
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| |||||||| |||| ||| ||||||||||||||||||| ||||||||||    
T  7010926 ttaatagcagttttaaccctctaagtttcaagaagttgcgattctgacccccta 7010979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 27453124 - 27453181
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||||| |||| |||| |||||||||||||||| ||||||||| |||| ||||||    
T  27453124 aaggcttaaatgcatttttcaccccctatgtttcaaaaagttgcgaatttggccccct 27453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 34336477 - 34336578
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| ||||||||||||| |  || |||||| | |||||| || |||||||||| | || |||||||| ||  ||||||||||| ||| |||||||||    
T  34336477 actttaaatagtaagtttttgtcaaagtttatgaaatcaatgcattggaaattgaagtttttgacttttttaaagaataatttctttattaagaatcctt 34336576  T
Q  338 aa 339  Q
    ||    
T  34336577 aa 34336578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 20788034 - 20788082
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| ||||||||||||||| ||||||| ||||||    
T  20788034 ggcttaattgcacttttggccccctatgtttcaataagttgcaattttg 20788082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 27453590 - 27453534
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||| |||| |||| |||||||||||||||| |||||| ||||||| ||||||    
T  27453590 aggcttaaatgcacttttcaccccctatgtttcaaaaagttgtgattttggccccct 27453534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 327
Target Start/End: Original strand, 33285922 - 33286018
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||| |||||||| ||||||| |||||||  ||| || || ||| |||  |||| |||||||||| ||| | |||||||| ||||||||||||||||    
T  33285922 tttaaggactttaaatagtaaatttttatgaaaaattgtgtatttaatacatcgaaaattgaaatgttaaattttttcaaaaaataatttcttaatt 33286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 327
Target Start/End: Original strand, 43238106 - 43238234
Alignment:
Q  199 ggaaaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatatt 298  Q
    |||||||||||| ||||   |||||  || |||||| | |||||| ||||||| ||||||| |||| || | |||| |||| |||| |||||||| | ||    
T  43238106 ggaaaatgttaacgagtgccctaagtgcactctttaagaactttaaatagtaaatttttatggaaaattctacatttaatgcatcgaaaattgaagtgtt 43238205  T
Q  299 agactttttcaataaataatttcttaatt 327  Q
    | ||||||| ||  |||||||||||||||    
T  43238206 aaacttttttaaggaataatttcttaatt 43238234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 461
Target Start/End: Complemental strand, 8952876 - 8952829
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||||| ||||| | ||||||||||||||||| |||||||||    
T  8952876 ggcttaattgcacttttggctccctatgtttcaagaagatgcgatttt 8952829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 336
Target Start/End: Original strand, 41105993 - 41106100
Alignment:
Q  229 tctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaattt 328  Q
    |||||| |||| ||| || |||||||||||   ||| || || |||||||| || | |||||||| |||| |||||||| ||| | ||||||||||||||    
T  41105993 tctttaaggaccttaaatggtaagtttttacgaaaaattgtgaattcaatgcattgaaaattgaactatttgacttttttaatgattaatttcttaattt 41106092  T
Q  329 agaatcct 336  Q
     |||||||    
T  41106093 ggaatcct 41106100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 41646662 - 41646611
Alignment:
Q  227 attctttacggactttagatagtaagtttttattgaaatttatgcattcaat 278  Q
    |||||||| ||||||||||||||||||||||||  ||| || ||||||||||    
T  41646662 attctttaaggactttagatagtaagtttttatgaaaacttgtgcattcaat 41646611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 45309638 - 45309587
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||| ||||||    
T  45309638 taaggcttaattgcacttttggccctctatatttcaagaagttgcaattttg 45309587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 8409880 - 8409831
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  8409880 aaggcttaatagcagttttgaccca-tatgttttaagaagttgcgattttg 8409831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 9498908 - 9498962
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||  |||||||| ||||||| || ||| ||||||||||||||||||||    
T  9498908 aggcttaataacagttttggccccctaagtatcaggaagttgcgattttgacccc 9498962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 436 - 470
Target Start/End: Complemental strand, 26889683 - 26889649
Alignment:
Q  436 cctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||||||||||||||||||||    
T  26889683 cctatgttttaagaagttgcgattttgacccccta 26889649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 32332944 - 32332866
Alignment:
Q  249 taagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||||||||  ||| |||| ||||||||| |||| |||| ||| ||||| || |||||||| |||||||| ||||||    
T  32332944 taagtttttatgaaaacttatacattcaatgcatcgaaaatcgaagtattaaacattttcaatgaataattttttaatt 32332866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 40464410 - 40464508
Alignment:
Q  236 ggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatc 334  Q
    |||||||  ||||||| ||||||| | || || |||||||||   |||| |||||||||||||| || |||||||| |||| ||| |||||| ||||||    
T  40464410 ggactttgaatagtaaatttttatggtaacttgtgcattcaaaacatcgaaaattgaaatattaaacattttcaatgaatagttttttaattgagaatc 40464508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 41487198 - 41487256
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||||||  ||||| |  ||||| |||||||||||||||||||||||    
T  41487198 aaggcttaatagcagttttcgcccccgaattttcacgaagttgcgattttgacccccta 41487256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 521758 - 521709
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||| |||||||| ||||||||  ||||| ||||||||||||||    
T  521758 aaggcttaatagcagttttcaccccctaattttcacgaagttgcgatttt 521709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 1003859 - 1003811
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||  |||||||| ||||||||||||||||||||||| ||||||    
T  1003859 aggcttaataacagttttg-ccccctatgtttcaagaagttgcaattttg 1003811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 4423049 - 4423086
Alignment:
Q  434 cccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  4423049 cccctaagtttcaaaaagttgcgattttgaccccctat 4423086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 5020092 - 5020157
Alignment:
Q  274 tcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| ||||||||||||||| || |||||||| |  |||| |||||||  ||||||||||||||    
T  5020092 tcaatgtatcggaaattgaaatctttgacttttttataaaattatttcttcttttagaatccttaa 5020157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 5916967 - 5916914
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||| ||| |||||||| ||||||||||||||||  |||||||    
T  5916967 ttaattgcacttttggccctctatgttttaagaagttgcgatttttgcccccta 5916914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 10285102 - 10285158
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||| ||| |||| | ||||||||||||||||||||||    
T  10285102 aggcttaattgcatttttggcccc-tatctttctaaaagttgcgattttgacccccta 10285158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 471
Target Start/End: Original strand, 12723269 - 12723318
Alignment:
Q  422 tgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    |||| |||| |||||||||||||||| | ||||| |||||||||||||||    
T  12723269 tgcacttttcaccccctatgtttcaaaacgttgcaattttgaccccctat 12723318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 17075065 - 17075016
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacc 465  Q
    |||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  17075065 cttaattgcacttttgaccccctatctttttaaaagttgcgattttgacc 17075016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Original strand, 17573205 - 17573254
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacc 465  Q
    |||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  17573205 cttaattgcacttttgaccccctatctttttaaaagttgcgattttgacc 17573254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 20853377 - 20853434
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||  |||||||  ||||  |||||||||||||||||||||||    
T  20853377 aggcttaatagcagttttagccccctaactttcttgaagttgcgattttgacccccta 20853434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 31947853 - 31947910
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||| |||  | |||||||||||||| |||||||    
T  31947853 aggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggcccccta 31947910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 2335799 - 2335843
Alignment:
Q  285 gaaattgaaatattagactttttcaataaataatttcttaattta 329  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||    
T  2335799 gaaattgaaatatttaatttttttaataaataatttcttaattta 2335843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 8347551 - 8347599
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| || ||||||||| ||||||||| |||||||    
T  8347551 ggcttaattgcacttttggcctcctatgttttaagaagttgtgattttg 8347599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 14170748 - 14170704
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||| ||||||| |||||||| ||||||||||||| ||||||    
T  14170748 ttaattgtagttttggccccctatatttcaagaagttgagatttt 14170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 18539133 - 18539188
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| |||||||||| ||| |||| | |||||||||||||| |||||||    
T  18539133 ggcttaattgcacttttgacccc-tatctttctaaaagttgcgattttggcccccta 18539188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 34602491 - 34602435
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||| |||| |||| ||| |||||||||||| ||||||| |||||| ||||||    
T  34602491 aggcttaaatgcaattttcacctcctatgtttcaaaaagttgcaattttggccccct 34602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 41602926 - 41602878
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||| ||||||||  ||||||| ||||||| |||||||||||||    
T  41602926 aggcttaatagcagttttagccccctaagtttcaaaaagttgcgatttt 41602878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 46506429 - 46506326
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga--ctttttcaataaataatttcttaatttagaatcc 335  Q
    ||||||||||||||| |||| | ||||||||| |||| |||| ||||||||||||| |||||||   |||||||||||||| |||||||||| |||||||    
T  46506429 actttagatagtaagcttttgtggaaatttatccatttaatgcatcggaaattgaagtattagattttttttcaataaatagtttcttaattaagaatcc 46506330  T
Q  336 ttaa 339  Q
    ||||    
T  46506329 ttaa 46506326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 19652733 - 19652634
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||||||||||||||||  |||||| ||||||||||| || ||||||| || ||||| || |||||||| |||||| ||||||||||||| ||||||    
T  19652733 tttagatagtaagtttttatgaaaatttgtgcattcaatgcattggaaattaaactattatacattttcaatgaataatatcttaatttagaaaccttaa 19652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 7388877 - 7388788
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||||||||||| ||||||| |||| || |||||| |||| ||||||||||| || ||||||||||||||||  ||| ||||||||||    
T  7388877 actttagatagtaaatttttatggaaacttgtgcatttaatgcatcggaaattggaacattagactttttcaatggatattttcttaatt 7388788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 327
Target Start/End: Complemental strand, 38380572 - 38380471
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaa 325  Q
    ||||||||| |||||||| ||||||| ||||||| |||| ||||||||| ||||  |||||||||||| | ||| ||||||||||  || ||||| ||||    
T  38380572 cattctttaaggactttaaatagtaaatttttatggaaaattatgcatttaatgcttcggaaattgaagtgttaaactttttcaaagaaaaatttattaa 38380473  T
Q  326 tt 327  Q
    ||    
T  38380472 tt 38380471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 38949027 - 38949152
Alignment:
Q  202 aaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga 301  Q
    ||||||||| |||| || ||||| || |||||| |||||| | ||||||| |||||||  ||| || ||||||||||| ||||||||||||| | ||| |    
T  38949027 aaatgttaacgagtgttttaagggcactctttaaggacttgaaatagtaaatttttatgaaaaattgtgcattcaatgcatcggaaattgaagtgttaaa 38949126  T
Q  302 ctttttcaataaataatttcttaatt 327  Q
     ||||| || ||||||||| ||||||    
T  38949127 tttttttaagaaataattttttaatt 38949152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 470
Target Start/End: Original strand, 1139157 - 1139212
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||    
T  1139157 gcttaattgcacttttgaccccctatggttcaagaagttgcgatttttgcccccta 1139212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 320
Target Start/End: Original strand, 40781425 - 40781496
Alignment:
Q  249 taagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataattt 320  Q
    ||||||||||| ||||| ||||||||||||| ||| |||||| ||  |||| ||||||||||||||||||||    
T  40781425 taagtttttatggaaatctatgcattcaatgcatcagaaattaaagcattaaactttttcaataaataattt 40781496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 13388160 - 13388214
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||    
T  13388160 aggcttaattgcagttttggccccctatgtttcaagaagtagagattttggcccc 13388214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 53061864 - 53061806
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||  ||||| ||| ||||||| |||||||||||||||||||||||||    
T  53061864 aaggcttaattgcacctttgatcccatatgttttaagaagttgcgattttgacccccta 53061806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 31760765 - 31760822
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| ||||||| |||||||    
T  31760765 aggcttaattgcacttttgacctcctatgttttaagaagttgtgattttggcccccta 31760822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 41148164 - 41148221
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||  |||||||    
T  41148164 aggcttaatagcagttttggccccctatgtttcaagaagttccgattttagcccccta 41148221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 53831152 - 53831200
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  53831152 ggcttaatagcagttttggccccctatgttttaagaagttgcgattttg 53831200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 32893115 - 32893024
Alignment:
Q  236 ggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||||| |||||||  |||||| |||| || ||||||||||| |||| |||||||||| ||| |||||||  | |||||| |||||||||    
T  32893115 ggactttaaatagtaaacttttatagaaaattgtgcattcaatgcatcgaaaattgaaatgttaaactttttttaaaaataaattcttaatt 32893024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 415 - 470
Target Start/End: Original strand, 33641852 - 33641907
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||||||||||| ||||    
T  33641852 gcttaattgcagttttggccccttatgttttaagaaattgcgattttgacctccta 33641907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 49804412 - 49804354
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||| |||||||||| ||| |||||||||||||||||||||| ||||||    
T  49804412 taaggcttaatagcaattttgacccc-tatatttcaagaagttgcgattttgatccccta 49804354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 8672059 - 8672013
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  8672059 gcttaattgcacttttggccccttatgtttcaagaagttgcgatttt 8672013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 24916382 - 24916468
Alignment:
Q  253 tttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||| |||| || || |||||||||||| | ||||||| |||| ||  |||||||| |||| |||||||||| |||||||||||    
T  24916382 tttttatagaaacttgtgtattcaatggatcaggaattgaagtattggatattttcaatgaatattttcttaattgagaatccttaa 24916468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 51542942 - 51543000
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||||||  |||||||| || || |||||||||||||||||||    
T  51542942 aaggcttaattgcacttttgaccatctatgttttaaaaaattgcgattttgacccccta 51543000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 5047306 - 5047221
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttctt 323  Q
    |||||| ||||||||||||| || || |||||| | |||||| || |||||||||||| || |||||||  ||| |||||||||||    
T  5047306 actttaaatagtaagttttttttaaagtttatgaaatcaatgcattggaaattgaaatttttgacttttgtaatgaataatttctt 5047221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 466
Target Start/End: Complemental strand, 21552972 - 21552919
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||| ||||||||| |  |||||||||||||||||| ||||||||||||    
T  21552972 aggcttaatagcagttttggcaacctatgtttcaagaagttacgattttgaccc 21552919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 38828507 - 38828556
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||| ||| |||||||| |||||||||||||||||    
T  38828507 aggcttaattgcacttttggccctctatgttttaagaagttgcgattttg 38828556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 328
Target Start/End: Original strand, 41370165 - 41370262
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaattt 328  Q
    |||| |||||||  |||||||||||||||  |||||| || | |||||| || | |||||||||||||  |||||||  | |||||||||||||||||    
T  41370165 tttaaggactttgaatagtaagtttttatgaaaatttgtgtaatcaatgcattgaaaattgaaatatttaacttttttgagaaataatttcttaattt 41370262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 47742234 - 47742287
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| ||||||||| || ||||||||||| ||||||||||||||| |||||||    
T  47742234 ttaatagcagttttgtccacctatgtttcaggaagttgcgattttggcccccta 47742287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 47742655 - 47742602
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||  |||||||    
T  47742655 ttaatagcagttttgaccccctatgttttaagaagttacgattttagcccccta 47742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Complemental strand, 6033959 - 6033899
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctatg 472  Q
    |||||||||| ||| ||||| |||||||| ||| ||||||||||||||||| |||| ||||    
T  6033959 aaggcttaatcgcatttttggccccctatattttaagaagttgcgattttggccccatatg 6033899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 30064002 - 30064050
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||| | ||||||| |||||||||||| |||||||||||||||||    
T  30064002 ggcttaatagaagttttggccccctatgttttaagaagttgcgattttg 30064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 339
Target Start/End: Original strand, 49011880 - 49011988
Alignment:
Q  231 tttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttag 330  Q
    |||| |||||||| ||||||||||||| |  ||| || |||||| |||| |||| |||||||| ||||| ||||||| ||| ||||  ||||| ||| |     
T  49011880 tttaaggactttaaatagtaagtttttgtgaaaacttgtgcatttaatgcatcgaaaattgaagtattaaacttttttaatgaatagattcttgattaaa 49011979  T
Q  331 aatccttaa 339  Q
    |||||||||    
T  49011980 aatccttaa 49011988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 53578970 - 53578922
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||| || |||||| |||||||||||| ||||||||||||||||    
T  53578970 aggcttaatagccgttttggccccctatgttttaagaagttgcgatttt 53578922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 1140682 - 1140631
Alignment:
Q  412 aaggcttaattgcagttttgaccccc-tatgtttcaagaagttgcgattttg 462  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||||||||||    
T  1140682 aaggcttaaatgcacttttggcccccctatgtttcaagaagttgcgattttg 1140631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 6979739 - 6979688
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacc 465  Q
    ||||||| |||| |||| ||| |||||||||||| |||||||||||||||||    
T  6979739 ggcttaaatgcacttttcacctcctatgtttcaaaaagttgcgattttgacc 6979688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 8143034 - 8143081
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||| ||||| || ||||||||| |||||||||||||||||    
T  8143034 gcttaattgcacttttggcctcctatgttttaagaagttgcgattttg 8143081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 8144439 - 8144384
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||||   ||||||||||||||||||||  |||||||||||||||    
T  8144439 gcttaattgcaattttagtcccctatgtttcaagaagttatgattttgacccccta 8144384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 14816924 - 14816873
Alignment:
Q  412 aaggcttaattgcagttttga-ccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||| |||||  ||||||||||||| ||||||||||||||||    
T  14816924 aaggcttaattgcacttttggtccccctatgtttctagaagttgcgattttg 14816873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 30978698 - 30978753
Alignment:
Q  284 ggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||| |||| |||||||| ||||||| |||||||||||| |||| |||||    
T  30978698 ggaaattgaactatttgacttttttaataaatcatttcttaatttggaatgcttaa 30978753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 461
Target Start/End: Complemental strand, 55318094 - 55318047
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  55318094 ggcttaattgcacttttggccccctatgttttaagaagttacgatttt 55318047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 3369845 - 3369903
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||  |||||||  ||||||| || ||||||||||||||||||| |||||||    
T  3369845 aaggcttaatatcagtttttgccccctaagtatcaagaagttgcgattttggcccccta 3369903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 23133068 - 23133146
Alignment:
Q  254 ttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaa 332  Q
    |||||| |||| || || |||||||| ||||||||||||| | ||| ||||||| ||  ||||||||||||||| ||||    
T  23133068 ttttatagaaaattgtgtattcaatgcatcggaaattgaagtgttaaacttttttaaggaataatttcttaattgagaa 23133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 27018499 - 27018461
Alignment:
Q  433 ccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  27018499 ccccctatgtttcaaaatgttgcgattttgaccccctat 27018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 30627088 - 30627034
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||| |||||||| |||||||| || |||| ||||| |||||||||||||    
T  30627088 aggcttaatagcagttttcaccccctaagtatcaaaaagttacgattttgacccc 30627034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 31871074 - 31871144
Alignment:
Q  253 tttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttctt 323  Q
    ||||| || ||||||||| | |||||| ||||||||||||||||||  ||||||| |  ||||||||||||    
T  31871074 tttttttttaaatttatgtaatcaatgcatcggaaattgaaatattttacttttttataaaataatttctt 31871144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 36721589 - 36721659
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagacttttt 307  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| || |  |||||||||||| ||||||||    
T  36721589 gactttaaatagtaagtttttatggaaatttgtgtaatcaatgcattgagaattgaaatatttgacttttt 36721659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 40071380 - 40071322
Alignment:
Q  269 tgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||||||||  | |||||||||| |||| ||||||||||||  ||||||||||||||    
T  40071380 tgcattcaatgcgttggaaattgaagtattggactttttcaatgcataatttcttaatt 40071322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 53312601 - 53312547
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||||  ||||||| ||||||||  ||||| |||||||||||||||||||    
T  53312601 aaggcttaataacagttttcaccccctaactttcacgaagttgcgattttgaccc 53312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 53831375 - 53831318
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||| | ||||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  53831375 aaggcttactagcagttttgtcccc-tatgttttaagaagttgcgattttgacctccta 53831318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 5548064 - 5548019
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||| ||||||||| || ||||||||| |||||||||||||||||    
T  5548064 ttaatagcagttttggcctcctatgttttaagaagttgcgattttg 5548019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 31761913 - 31761860
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||| | ||||| |||||||| |||||||||||| |||||||| |||||||    
T  31761913 ttaattgtacttttggccccctatatttcaagaagttacgattttggcccccta 31761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 35393984 - 35393935
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| |||||||| ||||||||  ||||| |||||||||||||||    
T  35393984 aggcttaatagcagttttcaccccctaactttcacgaagttgcgattttg 35393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 467
Target Start/End: Complemental strand, 36414021 - 36413968
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||| ||||| |||||||| |||| | ||||||||||||| |||||    
T  36414021 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttcacccc 36413968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 37831595 - 37831648
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| ||||||||  ||||||| |||| ||||||||||||||||| |||||||    
T  37831595 ttaatagcagttttagccccctaagttttaagaagttgcgattttggcccccta 37831648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 40062382 - 40062309
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataa 313  Q
    |||| ||| ||| ||||||| ||||||  ||||||||||| || ||||| |||||||||  |||||||||||||    
T  40062382 tttaaataataaatttttatagaaattcgtgcattcaatgcattggaaaatgaaatattgaactttttcaataa 40062309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 44121102 - 44121045
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| || ||||| |||||||| |||  | ||||||||||||||||||||||    
T  44121102 aggcttaattacacttttggccccctatcttttcaaaagttgcgattttgacccccta 44121045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 50248012 - 50247943
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaa 314  Q
    ||||||||||||||| |||||| ||| |||||||| || | ||||| || ||||  ||||||||||||||    
T  50248012 atagtaagtttttatagaaattaatgaattcaatgcattgaaaatttaactatttaactttttcaataaa 50247943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 23016237 - 23016321
Alignment:
Q  249 taagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaat 333  Q
    |||||||||||  || | |||| |||||||| || |||||||||||| || ||||| || ||  |||||||||||||||| ||||    
T  23016237 taagtttttataaaagtctatgtattcaatgcattggaaattgaaatgtttgacttctttaaataataatttcttaatttggaat 23016321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 29776933 - 29776885
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| |||||||||||| |||||| || |||||||    
T  29776933 ggcttaattgcacttttggccccctatgttttaagaagctgtgattttg 29776885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 35830360 - 35830312
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||| ||||||||| || ||||| ||||||||||||| ||||||    
T  35830360 aggcttaatagcagttttggcctcctatatttcaagaagttgtgatttt 35830312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 40480175 - 40480275
Alignment:
Q  239 ctttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctta 338  Q
    ||||| |||||||||||||    || |||||| | |||||| ||||| |||||||||||| |||||||| |  | ||||||||||  ||||| |||||||    
T  40480175 ctttaaatagtaagttttttaaaaagtttatgtaatcaatgtatcgggaattgaaatatttgacttttttatgacataatttcttcttttagcatcctta 40480274  T
Q  339 a 339  Q
    |    
T  40480275 a 40480275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 13585 - 13478
Alignment:
Q  220 taaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatt 319  Q
    ||||| || ||||||  ||||| |||||||| |||||||| |||| || ||||||||| | ||||||||||||| ||||||||||||||||| |||| ||    
T  13585 taagggcactctttaaagacttgagatagtaggtttttatggaaacttgtgcattcaaagcatcggaaattgaagtattagactttttcaatgaatagtt 13486  T
Q  320 tcttaatt 327  Q
    ||||||||    
T  13485 tcttaatt 13478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 7873508 - 7873565
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  7873508 aggcttaattgcagttttgaccccctatgtttcaaggagttgcgattttggcccccta 7873565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 10691298 - 10691354
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  10691298 ggcttaattgcaattttggccccctatgtttcaagaagttgcgattttggcccccta 10691354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 30283405 - 30283459
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  30283405 aggcttaattgcagtttttaccccttatgtttcaagaagttgcgattttggcccc 30283459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 282916 - 282859
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||| |||||||    
T  282916 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggcccccta 282859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 327493 - 327436
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||    
T  327493 aggcttaatagcagttgtggccccctatgtttcaagaagttgcgattttggcccccta 327436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 10691700 - 10691647
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  10691700 ttaattgcagtttttaccccctatgtttcaagaagttacgattttggcccccta 10691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 339
Target Start/End: Complemental strand, 6771958 - 6771838
Alignment:
Q  219 ctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataat 318  Q
    |||||| || |||||| |||||||| ||||||| ||||||| |||| || ||||||||||  |||||||||||||||  |    ||||||||  ||||||    
T  6771958 ctaaggacactctttaaggactttaaatagtaaatttttatggaaaattgtgcattcaatatatcggaaattgaaatggtgagttttttcaaagaataat 6771859  T
Q  319 ttcttaatttagaatccttaa 339  Q
    ||||||||| |||| ||||||    
T  6771858 ttcttaattgagaaaccttaa 6771838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 29933190 - 29933238
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  29933190 ggcttaatagcagttttgacctcctatgtttcaagaagttgcgattttg 29933238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 3298329 - 3298231
Alignment:
Q  229 tctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||| | |||||||||  ||| ||||||| |||| ||| |||||||||| ||| ||||||||||||| |  |||||||||| |||| ||||||||||    
T  3298329 tctttaagaactttagatgttaaatttttatggaaacttaagcattcaatgcatcagaaattgaaatatgaagctttttcaatgaatagtttcttaatt 3298231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 7873947 - 7873897
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  7873947 aaggcttaattgcagttttggccccctatgtttcaagaaattgtgattttg 7873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 43078119 - 43078061
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| |||| |||| |||||| ||||||||||||||||||||||| |||||||    
T  43078119 aaggcttaatagcagatttggccccctctgtttcaagaagttgcgattttggcccccta 43078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 327
Target Start/End: Original strand, 44319819 - 44319948
Alignment:
Q  198 tggaaaatgttaaggagttttctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatat 297  Q
    ||||||||||||| |||| |||| ||  |||| |||| |||||||| ||| ||| ||||||| | || || |||||| |||| |||| ||||| || | |    
T  44319819 tggaaaatgttaacgagtattcttagagcattatttaaggactttaaataataaatttttatgggaaattgtgcatttaatgcatcgaaaattaaagtgt 44319918  T
Q  298 tagactttttcaataaataatttcttaatt 327  Q
    || ||||||| || ||||||||||||||||    
T  44319919 taaactttttaaaaaaataatttcttaatt 44319948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 24679158 - 24679102
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||  |||||||| |||||||||||||||||| ||||||||||| |||||||    
T  24679158 ggcttaataacagttttggccccctatgtttcaagaaattgcgattttggcccccta 24679102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 21954390 - 21954335
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||| |||||||||||||| |||| | |||||||||||||| ||||    
T  21954390 aaggcttaattgcacttttgaccccctatctttccaaaagttgcgattttggcccc 21954335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 9477502 - 9477448
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||| |||||||||||| ||||||||| || |||||||||||||| |||||||    
T  9477502 cttaatagcagttttgacctcctatgttttaaaaagttgcgattttggcccccta 9477448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 42438092 - 42438034
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||| ||||||||| ||||| ||| |||| ||||||||||||||||||||| |||||||    
T  42438092 aaggtttaattgcacttttggccctctatatttcaagaagttgcgattttggcccccta 42438034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 43092096 - 43092038
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| |||| |||| ||||||||||||||||||||| | |||||| |||||||    
T  43092096 aaggcttaatagcagatttggccccctatgtttcaagaagttacaattttggcccccta 43092038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 21939389 - 21939332
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| ||||||| || ||| ||||||||||||||| |||||||    
T  21939389 aggcttaatagcagttttggccccctaagtatcacgaagttgcgattttggcccccta 21939332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 462
Target Start/End: Original strand, 26974233 - 26974278
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||    
T  26974233 ttaattgcacttttggccccctatatttcaagaagttgcgattttg 26974278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 29933588 - 29933539
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||  |||||||||||| |||||||| |||||||||||||||||    
T  29933588 aggcttaataacagttttgaccctctatgttttaagaagttgcgattttg 29933539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 36061530 - 36061607
Alignment:
Q  262 aaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| || |||||||| || |||||| | | |||| |||||||| |||||||||||||||  ||||||||||||||    
T  36061530 aaatttgtgtattcaatgcattggaaatagtagtatttgacttttttaataaataatttcttgctttagaatccttaa 36061607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 39170380 - 39170331
Alignment:
Q  285 gaaattgaaatattagactttttcaataaataatttcttaatttagaatc 334  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  39170380 gaaattgaaacattaaactttttgaataaataatttcttaatttacaatc 39170331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 5490980 - 5490924
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||| |||| |||| |||||||||||||||| ||||||| |||||| ||||||    
T  5490980 aggcttaaatgcacttttcaccccctatgtttcaaaaagttgcaattttggccccct 5490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 24557833 - 24557734
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaattta-gaatcctta 338  Q
    |||||| ||||||||||| |  |||||  ||||| ||||| || | |||||||| ||||||||||||| |||||||||||| |||||| | |||||||||    
T  24557833 tttagaaagtaagtttttgtgtaaattg-tgcatacaatgtattgaaaattgaagtattagacttttttaataaataattttttaattgaggaatcctta 24557735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 27869193 - 27869253
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||| || |||| ||||  ||||||||||||||| | |||||||||||||||||||||    
T  27869193 taaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctat 27869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 31530432 - 31530376
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||| |||| | |||||| |||||||||||||||    
T  31530432 ggcttaattgcacttttggccccctatctttccaaaagttgggattttgacccccta 31530376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 40139877 - 40139821
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||||||| ||||| |||||||| |||| | |||||||||||||| ||||    
T  40139877 taaggcttaattgcacttttggccccctatctttctaaaagttgcgattttggcccc 40139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 42436829 - 42436877
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| |||||||||||| |||||||| ||||||||    
T  42436829 ggcttaattgcatttttggccccctatgttttaagaagttacgattttg 42436877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 20636924 - 20636865
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    |||||| || |||| ||||  ||||||||||||||| | |||||||||||||||||||||    
T  20636924 aaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctat 20636865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 21202917 - 21202862
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||| ||||||||| ||||| |||||||| |||| | |||||||||||||||||||    
T  21202917 aaggtttaattgcacttttggccccctatctttccaaaagttgcgattttgacccc 21202862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 30283766 - 30283723
Alignment:
Q  427 ttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||    
T  30283766 ttttggccccctatgtatcaaaaagttgcgattttgacccccta 30283723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 30503704 - 30503759
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||| ||||| | |||||||||| || |||||||||||||| ||||    
T  30503704 aaggcttaattgcacttttggcaccctatgttttaaaaagttgcgattttgccccc 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 31902744 - 31902839
Alignment:
Q  229 tctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttctta 324  Q
    |||||| |||||||| ||||||| ||||||| |||| || || | |||||| || | ||||||||||||| |||||| | ||  ||||||||||||    
T  31902744 tctttaaggactttaaatagtaaatttttatggaaaattgtgtagtcaatgtattgaaaattgaaatatttgactttcttaaggaataatttctta 31902839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 33159481 - 33159540
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||| |||| ||||||||| |||  | |||||||||||||| |||||||    
T  33159481 taaggcttaattgcacttttaaccccctatctttttaaaagttgcgattttggcccccta 33159540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 46266570 - 46266511
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||||||||  | ||||| ||||||||||||||| |||||| |||||||    
T  46266570 taaggcttaatagcagttttagctccctaagtttcaagaagttgcaattttgccccccta 46266511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 18201352 - 18201410
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| ||| |||| |||| | |||||||||||||| |||||||    
T  18201352 aaggcttaattgcacttttggcccactatctttctaaaagttgcgattttggcccccta 18201410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 339
Target Start/End: Complemental strand, 34681787 - 34681693
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||| |||||||  ||| || || ||| |||| || |||||||||| |||| |||||||  || |||||||||| ||||||||||| |||||    
T  34681787 atagtaactttttataaaaacttgtgtatttaatgcattggaaattgaactatttgacttttgtaaaaaataatttcctaatttagaatgcttaa 34681693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 40139527 - 40139585
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||  ||||||| |||| | |||||||||||||| |||||||    
T  40139527 aaggcttaattgcacttttgggcccctatctttctaaaagttgcgattttggcccccta 40139585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 47909605 - 47909647
Alignment:
Q  424 cagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||| |||||||| |||||||| |||||||||||||||||    
T  47909605 cagttttaaccccctaagtttcaaggagttgcgattttgaccc 47909647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 1449982 - 1450039
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| || ||||| |||||| ||||||| |||||| |||||||    
T  1449982 aggcttaattgcacttttggccacctatctttcaaaaagttgcaattttggcccccta 1450039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 5490502 - 5490559
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||||  ||| |||| ||||| |||||||||| |||||||||||||| ||||||    
T  5490502 aaggcttaaaagcacttttcaccccttatgtttcaaaaagttgcgattttggccccct 5490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 6707980 - 6707891
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||| ||| |||| |||||| ||||||||| |||||| || |||  ||||||||||||||   |||| |||| || ||||||||||||    
T  6707980 actttacataataagattttatagaaatttatacattcagtgtatcaaaaattgaaatattaagtttttccaatgaacaatttcttaatt 6707891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 9477131 - 9477180
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    |||| ||||| ||||||||| |||||||||||| || |||||||||||||    
T  9477131 aaggtttaatagcagttttggccccctatgttttaaaaagttgcgatttt 9477180  T

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Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 9500213 - 9500168
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||| ||||||||  ||||||| ||||||||||||||||||||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttg 9500168  T

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Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 17883317 - 17883418
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| ||||||||||||| |  ||||||||| | ||||||  | ||||||| || | || |||||||| || |||||||||||| ||| | |||||||    
T  17883317 actttaaatagtaagtttttgtcaaaatttatgaaatcaatgcgttggaaattaaagtttttgacttttttaaaaaataatttctttattaaaaatcctt 17883416  T
Q  338 aa 339  Q
    ||    
T  17883417 aa 17883418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 22739463 - 22739540
Alignment:
Q  262 aaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| | ||||||||| |||| |||||||  ||| |||  |||| ||||||||||||||||||| | |||||||||    
T  22739463 aaatttgtacattcaatgcatcgaaaattgatgtatcagatatttttaataaataatttcttaattgaaaatccttaa 22739540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 24432335 - 24432384
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| ||| ||||||||| ||| || |||||||||||||||||||    
T  24432335 aggcttaatagcaattttgacccactaagtatcaagaagttgcgattttg 24432384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 26402786 - 26402887
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    |||||| ||||||||||||| |  ||||||||| | |||||| || | |||||||| | || |||||||| ||  ||||||||||| |||  ||||||||    
T  26402786 actttaaatagtaagtttttgtcaaaatttatgaaatcaatgtattgaaaattgaagtttttgacttttttaaggaataatttctttattaggaatcctt 26402885  T
Q  338 aa 339  Q
    ||    
T  26402886 aa 26402887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 30505196 - 30505147
Alignment:
Q  414 ggcttaattgcagttttgac-cccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||  | |||||||||||||||||||||||||||||    
T  30505196 ggcttaattgcattttttgctcccctatgtttcaagaagttgcgattttg 30505147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 339
Target Start/End: Complemental strand, 41898352 - 41898255
Alignment:
Q  242 tagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||| ||| || |||| |||| || | |||| |||| ||||||||||||| ||||  ||||||||||| || | |||||||||| | |||||||||    
T  41898352 tagataataaattgttatggaaacttgtacatttaatgcatcggaaattgaattattgaactttttcaatgaaaagtttcttaattgaaaatccttaa 41898255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 46199052 - 46199101
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| ||||||||| ||| |||| ||| |||||||||||||||||    
T  46199052 aggcttaatagcagttttgcccctctatattttaagaagttgcgattttg 46199101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 2699317 - 2699270
Alignment:
Q  280 gatcggaaattgaaatattagac-tttttcaataaataatttcttaatt 327  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||    
T  2699317 gatcggaaattgaaatattaaacatttttcaa-aaataatttcttaatt 2699270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 5495991 - 5496075
Alignment:
Q  255 tttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||| |||| || ||||||||||| |||| ||||| || | ||| || |||||||  ||||||||||||||| |||| ||||||    
T  5495991 tttatggaaagttgtgcattcaatgcatcgaaaattaaagtgttaaacattttcaaggaataatttcttaattgagaaaccttaa 5496075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 6775331 - 6775232
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaata-ttagactttttcaataaataatttcttaatttagaatcctta 338  Q
    |||| ||||||| | ||||| |||| || ||||||||||| |||||||||| ||||| | ||| ||||||||  |||||||| |||||| |||| |||||    
T  6775331 tttaaatagtaaatatttatggaaaattgtgcattcaatgcatcggaaattcaaatagtgaga-tttttcaaagaataatttattaattgagaaacctta 6775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 10385762 - 10385706
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| |||||  ||||||| |||| | ||||||||||| ||||||||||    
T  10385762 ggcttaattgcacttttggacccctatctttccaaaagttgcgattatgacccccta 10385706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 11742971 - 11742915
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||| |||  | ||||||||||||||| ||||||    
T  11742971 ggcttaattgcacttttggccccctatcttttcaaaagttgcgattttgatccccta 11742915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 20505323 - 20505267
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||| |||||||| ||||||||  ||| | ||||||||||||||| |||||||    
T  20505323 ggcttaatagcagttttcaccccctagcttttatgaagttgcgattttggcccccta 20505267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 38452236 - 38452188
Alignment:
Q  275 caatggatcggaaattgaaatattagactttttcaataaataatttctt 323  Q
    ||||| |||||||||||||||||| |||||||| |  ||||||||||||    
T  38452236 caatgcatcggaaattgaaatatttgacttttttataaaataatttctt 38452188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 327
Target Start/End: Original strand, 32770762 - 32770863
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaa 325  Q
    ||||||||| ||||||||||||||||  |||||| |||||||||||  |||||| ||  ||||||||| |||||   |||||||||||||||||||||||    
T  32770762 cattctttaaggactttagatagtaaaattttatggaaatttatgcggtcaatgcattcgaaattgaagtattaagttttttcaataaataatttcttaa 32770861  T
Q  326 tt 327  Q
    ||    
T  32770862 tt 32770863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 27921991 - 27921891
Alignment:
Q  240 tttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattaga-ctttttcaataaataatttcttaatttagaatcctta 338  Q
    |||||||| ||||||||||  ||||||||| ||||||||| ||   ||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  27921991 tttagataataagtttttaaggaaatttatacattcaatgcatttaaaattgaaatattagaggttttttaataaataatttcttaatttagaatactta 27921892  T
Q  339 a 339  Q
    |    
T  27921891 a 27921891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 14816112 - 14816055
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  14816112 aggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggcccccta 14816055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 18734473 - 18734354
Alignment:
Q  219 ctaaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataat 318  Q
    |||||| |||||| || |||||| | ||||||| |||||||  ||| || ||||||||||| ||||||||||||| | ||| ||||||| ||  ||||||    
T  18734473 ctaaggacattctctaaggacttgaaatagtaaatttttatgaaaaattgtgcattcaatgtatcggaaattgaagtgttaaacttttttaaggaataat 18734374  T
Q  319 ttcttaatttagaatcctta 338  Q
    ||||||||| |||| |||||    
T  18734373 ttcttaattgagaaacctta 18734354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 4856709 - 4856762
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  4856709 ggcttaatagcagttttggccccttatgtttcaagaagttgcgattttgacccc 4856762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 8740153 - 8740206
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  8740153 aggcttaattgcagttttaaccccctatattttaagaagttgcgattttgaccc 8740206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 327
Target Start/End: Original strand, 32438074 - 32438175
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaa 325  Q
    ||||||||| |||||||| ||||||| ||||||| |||| || |||||| |||| ||||||||||||| | ||| || |||||||  |||||||| ||||    
T  32438074 cattctttaaggactttaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagtgttaaaccttttcaaataataattttttaa 32438173  T
Q  326 tt 327  Q
    ||    
T  32438174 tt 32438175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 11363882 - 11363930
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  11363882 ggcttaattgcatttttggccccctatgtttcaagaagttgcgattttg 11363930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 28719314 - 28719373
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||||||||| |||||||    
T  28719314 taaggcttaattgcccttttggccccctatgttttaagaagttgcgattttggcccccta 28719373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 8740498 - 8740449
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  8740498 ttaattgcagttttggcccc-tatgtttcaagaagttgcgattttgacccc 8740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 335
Target Start/End: Original strand, 11580424 - 11580522
Alignment:
Q  237 gactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcc 335  Q
    ||||||||||||||||||||||| ||||  | || |||||||  |||  |||||||| |||||||||| || ||| |||||||| |||||| |||||||    
T  11580424 gactttagatagtaagtttttatggaaacatgtgtattcaatccatcaaaaattgaagtattagacttatttaatgaataattttttaattgagaatcc 11580522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 12802520 - 12802470
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  12802520 aaggcttaatagcagttttggctccctatgtttcaagaagttgcgattttg 12802470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 52354 - 52297
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||||||| ||||| ||||||||||| |||||||    
T  52354 aggcttaattgcacttttggccccctatgttttaagaatttgcgattttggcccccta 52297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 21631821 - 21631874
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||    
T  21631821 ttaattgcacttttggccccctatgtttcatgaagttgcgattttggcccccta 21631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 14815698 - 14815746
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  14815698 ggcttaatagcagttttggccccctatgtttcaagaagttgcggttttg 14815746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 15023152 - 15023096
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||| ||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgacccccta 15023096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 36260541 - 36260429
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaa 325  Q
    ||||||||  ||||||| |||||||| ||| |||  |||||| || ||| |||| ||| |||||||||  |||||||||||||||| ||||| |||||||    
T  36260541 cattctttgaggactttggatagtaaatttatataaaaatttgtgtatttaatgcatcagaaattgaagcattagactttttcaattaataacttcttaa 36260442  T
Q  326 tttagaatcctta 338  Q
     |  |||||||||    
T  36260441 atgggaatcctta 36260429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 9781001 - 9780950
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttga 463  Q
    |||||||||||||||||||| |||| ||||||| || |||||||||||||||    
T  9781001 aaggcttaattgcagttttggccccttatgttttaaaaagttgcgattttga 9780950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 14984017 - 14983966
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||||| ||||| |||| ||||||| |||||||||||||||||    
T  14984017 taaggcttaattgcacttttggccccgtatgttttaagaagttgcgattttg 14983966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 25093909 - 25093866
Alignment:
Q  285 gaaattgaaatattagactttttcaataaataatttcttaattt 328  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  25093909 gaaattgaaatatttgacttttttaataaataatttcttaattt 25093866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 466
Target Start/End: Original strand, 35500037 - 35500092
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||| ||||| |||||    
T  35500037 taaggcttaatagcagttttggccccctatgtttcaaaaagttgtgatttcgaccc 35500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 4423830 - 4423780
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||||||||| || |||||||||| || |||||||||||||||||||    
T  4423830 ttaattgcagttttaactccctatgttttaaaaagttgcgattttgacccc 4423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 36286469 - 36286411
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| |||||||| |||| | |||||||||||||| |||||||    
T  36286469 aaggcttaattgcacttttggccccctatctttccaaaagttgcgattttggcccccta 36286411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 39374445 - 39374387
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||||||||||| |||  | ||||||| ||||||||||||||    
T  39374445 aaggcttaattgcacttttgaccccctatattttcaaaagttgcaattttgacccccta 39374387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 23280945 - 23280888
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||| |||| | |||||||||||||| |||||||    
T  23280945 aggcttaattgcacttttgtccccctatctttctaaaagttgcgattttggcccccta 23280888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 29260331 - 29260432
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctt 337  Q
    ||||||||||||||||||||||  || |||  ||||| |||| |||| ||||||||  ||||   ||||| ||||| || |||||||||| |||||||||    
T  29260331 actttagatagtaagtttttatgaaagtttgagcatttaatgcatcgaaaattgaaggattaagttttttaaataattattttcttaattaagaatcctt 29260430  T
Q  338 aa 339  Q
    ||    
T  29260431 aa 29260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 29825074 - 29825018
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||||| |||| |||| ||||| |||||||||| |||||||||||||||||||||    
T  29825074 aaggcttaaatgcactttttacccc-tatgtttcaaaaagttgcgattttgaccccct 29825018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 35500406 - 35500349
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| | |||||||   |||||||||||||||||||||||||||| |||||||    
T  35500406 aggcttaatagtagttttggggccctatgtttcaagaagttgcgattttggcccccta 35500349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 39672735 - 39672687
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  39672735 aggcttaattgcagttttggcccc-tatgtttcaagaagttgtgattttg 39672687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 44078600 - 44078555
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||    
T  44078600 ttaattgcacttttggccccctatgttttaagaagttgcgattttg 44078555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 10857339 - 10857395
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||| |||| | |||||||||||||| |||||||    
T  10857339 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttggcccccta 10857395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 23049874 - 23049830
Alignment:
Q  418 taattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||    
T  23049874 taattgcacttttggccctctatgtttcaagaagttgcgattttg 23049830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 29370727 - 29370771
Alignment:
Q  425 agttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||    
T  29370727 agttttggccccctatgttttaagaagttgcgattttgatcccct 29370771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 29865825 - 29865877
Alignment:
Q  287 aattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||||| |||||||| ||  |||||||||||| ||||||||||||||    
T  29865825 aattgaaatattcgactttttaaaagaataatttcttattttagaatccttaa 29865877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 32661748 - 32661692
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||| |||| | |||||||||||||| |||||||    
T  32661748 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttggcccccta 32661692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 2755266 - 2755207
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||| ||||| |||||||| |||  | |||||||||||||| |||||||    
T  2755266 taaggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggcccccta 2755207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 7933396 - 7933341
Alignment:
Q  238 actttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaa 293  Q
    |||||| ||||||| |||||||  ||| |||||||||||||| |||||||||||||    
T  7933396 actttaaatagtaaatttttatgaaaaattatgcattcaatgcatcggaaattgaa 7933341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 11252722 - 11252781
Alignment:
Q  268 atgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||||||||| |||| |||||||| || |||||||||||||| || | ||||||||||    
T  11252722 atgcattcaatgtatcgaaaattgaagtagtagactttttcaattaaaagtttcttaatt 11252781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 462
Target Start/End: Complemental strand, 17850547 - 17850500
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||| | ||||||| |||||||||||| |||||||||||||||||    
T  17850547 gcttaatagtagttttggccccctatgttttaagaagttgcgattttg 17850500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 43890097 - 43890148
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||| ||||||||| |||||  ||||||||||| |||||||||||||||||    
T  43890097 taaggtttaattgcacttttggtcccctatgtttgaagaagttgcgattttg 43890148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 4423420 - 4423469
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  4423420 aaggcttaattgcagttttggccct-tatgttttaagaagttgcgattttg 4423469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 8030124 - 8030174
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||| ||||||||| ||||||||||||  ||||||||| ||||||    
T  8030124 aaggcttaatagcagttttggccccctatgtttacagaagttgcaattttg 8030174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 339
Target Start/End: Complemental strand, 8964483 - 8964393
Alignment:
Q  249 taagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||| |||||  |||||| || | |||||| || |||||||||||||||  ||||||| ||  ||||||| ||||||||||||| |||||    
T  8964483 taagtatttatgaaaatttgtgtaatcaatgcattggaaattgaaatattttacttttttaaagaataattacttaatttagaatgcttaa 8964393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 339
Target Start/End: Original strand, 9153486 - 9153579
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    |||||||||||| ||  |||||| || |||||||| || |||||||||| | || | |||||| ||  |||||||||||||||| ||||||||||    
T  9153486 atagtaagtttt-ataaaaatttgtgtattcaatgcattggaaattgaagtgtttgccttttttaaagaataatttcttaatttggaatccttaa 9153579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 11176212 - 11176154
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||| || |||| ||||| || |||||||||||| | |||||||||||||||||||||    
T  11176212 aggctaaagtgcacttttggcctcctatgtttcaaaatgttgcgattttgaccccctat 11176154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 11188308 - 11188362
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| |||||||||||||| |||  | |||||||||||||| |||||||    
T  11188308 cttaattgcacttttgaccccctatcttttcaaaagttgcgattttggcccccta 11188362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 455
Target Start/End: Complemental strand, 21633382 - 21633340
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgc 455  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||    
T  21633382 aggcttaattgcacttttggccccctatgttttaagaagttgc 21633340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 32661402 - 32661460
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| |||||||| |||  | |||||||||||||| |||||||    
T  32661402 aaggcttaattgcacttttggccccctatcttttcaaaagttgcgattttgtcccccta 32661460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 33618036 - 33617966
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaat 315  Q
    |||||||| |||||| ||||| | ||||||||||| || ||||||| |||||||  ||||||| |||||||    
T  33618036 atagtaagattttatagaaatatgtgcattcaatgcattggaaattaaaatatttaactttttaaataaat 33617966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 327
Target Start/End: Original strand, 33962938 - 33963036
Alignment:
Q  229 tctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    |||||| |||||||| ||| ||| |||||||  ||| || ||||||||||| || | |||||||| | ||| ||||||| ||  |||||||||||||||    
T  33962938 tctttaaggactttaaataataaatttttatgaaaaattgtgcattcaatgcattgaaaattgaagtgttaaacttttttaaagaataatttcttaatt 33963036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 43741816 - 43741759
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||  | | |||||||||||||||||||||||||| ||||||    
T  43741816 aaggcttaattgcacttttggtcgc-tatgtttcaagaagttgcgattttgatccccta 43741759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 44618053 - 44618003
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||| |||||||| |||| |||  |||||||||||||||||||||    
T  44618053 aaggcttaatagcagttttaaccctctaactttcaagaagttgcgattttg 44618003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 10741392 - 10741335
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||| ||||| |||||||| |||  | |||||||| |||||||||||||    
T  10741392 aggcttaattgcacttttggccccctatcttttcaaaagttgcggttttgacccccta 10741335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 20650369 - 20650426
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||| || ||||||||  ||||||| |||||||||||||| ||||||| |||||||    
T  20650369 aggcttcatagcagttttagccccctaagtttcaagaagttgagattttggcccccta 20650426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 21024775 - 21024726
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| |||||||||||||| |||  | ||||||||||||||    
T  21024775 aggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttg 21024726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 23048289 - 23048346
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||| ||||||| ||||| |||| ||| ||| ||||||||||||||||| |||||||    
T  23048289 aggctaaattgcatttttggccccttatattttaagaagttgcgattttggcccccta 23048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 23685822 - 23685878
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| | ||||| |||| ||||||||||||||||||||||||  |||||||    
T  23685822 aggcttaattggacttttggcccc-tatgtttcaagaagttgcgattttttcccccta 23685878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 471
Target Start/End: Complemental strand, 28851722 - 28851673
Alignment:
Q  422 tgcagttttgaccccctatgtttcaagaagttgcgattttgaccccctat 471  Q
    ||||||||||||||||||  |||||  | |||||||||||||||||||||    
T  28851722 tgcagttttgaccccctaactttcacaatgttgcgattttgaccccctat 28851673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 34600546 - 34600595
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||| |||||||| |||| | ||||||||||||||    
T  34600546 aggcttaattgcacttttggccccctatctttccaaaagttgcgattttg 34600595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 16143687 - 16143723
Alignment:
Q  434 cccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  16143687 cccctatatttcaagaagttgcgattttggcccccta 16143723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 28451640 - 28451692
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||||||||| ||||| |||||||| |||| | |||||||||||||| ||||    
T  28451640 gcttaattgcacttttggccccctatctttctaaaagttgcgattttggcccc 28451692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 42274833 - 42274782
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    ||||||||| |||||||||| ||| |||| |||||||||||||||| ||||||    
T  42274833 ttaattgcacttttgacccc-tatctttctagaagttgcgattttggccccct 42274782  T

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Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 12203890 - 12203948
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  12203890 aaggtttaattgcacttttggccccctatgtttcaagaagttgcgattttgacccccta 12203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 5678476 - 5678576
Alignment:
Q  239 ctttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctta 338  Q
    ||||||||||||| ||||||| |||||||||  |||||||| || | |||||||| ||||| ||||||| ||| ||||||||||||| |  |||||||||    
T  5678476 ctttagatagtaaatttttatagaaatttatatattcaatgtattgaaaattgaagtattaaacttttttaatgaataatttcttaactatgaatcctta 5678575  T
Q  339 a 339  Q
    |    
T  5678576 a 5678576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 11624362 - 11624306
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  11624362 ggcttaattgcaattttgaccccctatgtttcaagaagttgcaattttgaaccccta 11624306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 28574620 - 28574564
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  28574620 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggcccccta 28574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 2173935 - 2173878
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||    
T  2173935 aaggcttaattgcacttttggccccctatgtttcaagaagtagcgattttgactccct 2173878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 11623159 - 11623215
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||    
T  11623159 ggcttaattgcacttttggccctctatgtttcaagaagttgcgattttggcccccta 11623215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 22517547 - 22517491
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| |||||  |||||||||||||||||||| ||||||||||||||||    
T  22517547 ggcttaattgcacttttggtcccctatgtttcaagaagttacgattttgacccccta 22517491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 10570928 - 10571047
Alignment:
Q  220 taaggtcattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatt 319  Q
    ||||| || ||||||  |||||||  |||||| ||||||| ||||||| | ||||||||| |||  |||||||| ||||  || |||||||| |||| ||    
T  10570928 taaggacactctttaaagactttatttagtaaatttttatagaaatttgttcattcaatgcatcaaaaattgaagtattgaacattttcaatgaatagtt 10571027  T
Q  320 tcttaatttagaatccttaa 339  Q
    |||||||| |||||||||||    
T  10571028 tcttaattaagaatccttaa 10571047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 2018629 - 2018575
Alignment:
Q  416 cttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||| |||||||    
T  2018629 cttaattgcacttttggccccttatgtttcaagaagttgcgattttggcccccta 2018575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 9070185 - 9070131
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  9070185 aaggcttaatagcatttttggccccctatgtttcaagaagttgcgattttaaccc 9070131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 461
Target Start/End: Original strand, 12798724 - 12798774
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  12798724 taaggcttaatagcagttttggccccctatatttcaagaagttgcgatttt 12798774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 2078186 - 2078222
Alignment:
Q  434 cccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||||||||||||||||||||||||||    
T  2078186 cccctatgtttcaagaagttgcgattttgacccccta 2078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 12766531 - 12766472
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| |||||||| ||||||||  ||||| ||||||||||||||| |||||||    
T  12766531 taaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggcccccta 12766472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 466
Target Start/End: Original strand, 4792294 - 4792348
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    |||||||||||||| ||||| ||| |||||||| |||||||||| ||||||||||    
T  4792294 aaggcttaattgcatttttggccctctatgttttaagaagttgcaattttgaccc 4792348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 339
Target Start/End: Original strand, 6586428 - 6586522
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatccttaa 339  Q
    ||||||| |||||||  |||||||||  ||||||| ||||||||||||| |||  |||||||||||  | ||||||| |||||||| || |||||    
T  6586428 atagtaactttttatgaaaatttatgttttcaatgcatcggaaattgaactatctgactttttcaaagattaatttcctaatttagtatgcttaa 6586522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 22515971 - 22516021
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||| || |||||  |||||||||||||||||||||||||||||    
T  22515971 aaggcttaattacacttttggtcccctatgtttcaagaagttgcgattttg 22516021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 30369784 - 30369837
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||| ||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  30369784 ggcttaatagcagttttggccccttatgttttaagaagttgcgattttgtcccc 30369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 1252818 - 1252754
Alignment:
Q  242 tagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttt 306  Q
    |||||| |||||||||||  ||||| |||||||||||| |||  |||||||| ||||||||||||    
T  1252818 tagatattaagtttttatcaaaattaatgcattcaatgcatcataaattgaagtattagactttt 1252754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 4037035 - 4037094
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||||||| ||||| |||||||| |||  | |||||||||||||| |||||||    
T  4037035 taaggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggcccccta 4037094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 1897194 - 1897136
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||| ||||||| |||| | |||||||| || ||||||||||    
T  1897194 aaggcttaattgcatttttgaacccctatctttccaaaagttgcggttatgacccccta 1897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 2017170 - 2017220
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||| |||||  |||||| |||||||||||||| |||||||    
T  2017170 aaggcttaattgcatttttggtcccctaagtttcaagaagttgtgattttg 2017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 7504933 - 7504883
Alignment:
Q  417 ttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    ||||| ||||||||| |||||||| |||||||||||||| |||||| ||||    
T  7504933 ttaatagcagttttggccccctatatttcaagaagttgcaattttggcccc 7504883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 14169033 - 14168975
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| |||||||| |||  | || |||||||||||||||||||    
T  14169033 aaggcttaattgcacttttggccccctatcttttcaaaatttgcgattttgacccccta 14168975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 461
Target Start/End: Complemental strand, 29874519 - 29874470
Alignment:
Q  414 ggcttaattgcagtttt--gaccccctatgtttcaagaagttgcgatttt 461  Q
    |||||||||||| ||||  | |||||||||||||||||||||||||||||    
T  29874519 ggcttaattgcacttttcggtccccctatgtttcaagaagttgcgatttt 29874470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 238929 - 238986
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| ||||||||  |||||||  ||||| |||||||||||||||||| ||||    
T  238929 aggcttaatagcagttttcgccccctaattttcacgaagttgcgattttgacctccta 238986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 1243437 - 1243372
Alignment:
Q  241 ttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttt 306  Q
    ||||||| ||||||||||   |||||||||||||||||| |||  |||||||| ||||||| ||||    
T  1243437 ttagatattaagtttttaccaaaatttatgcattcaatgcatcttaaattgaagtattagattttt 1243372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 2538983 - 2539036
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccc 467  Q
    |||||||| | |||||||  ||||||||||| || |||||||||||||||||||    
T  2538983 ggcttaatagtagttttggtcccctatgttttaaaaagttgcgattttgacccc 2539036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 4793891 - 4793842
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||||| ||||  ||| |||||||||||| |||||||||||||    
T  4793891 aggcttaattgcattttttgcccactatgtttcaagcagttgcgattttg 4793842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 7465555 - 7465510
Alignment:
Q  262 aaatttatgcattcaatggatcggaaattgaaatattagacttttt 307  Q
    ||||||||| | |||||| |||||||||||||||||| ||||||||    
T  7465555 aaatttatgtaatcaatgcatcggaaattgaaatatttgacttttt 7465510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 10582192 - 10582156
Alignment:
Q  434 cccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  10582192 cccctatatttcaagaagttgcgattttggcccccta 10582156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 20106 - 20163
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccccct 469  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||    
T  20106 aaggcttaattgcacttttggccccctatgtttcaagaagtagcgattttgactccct 20163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 5015 - 5097
Alignment:
Q  245 atagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatt 327  Q
    ||||||| ||||||| |||| |||||||||||||| || |||||||||||| ||| ||||||| ||  |||||||| ||||||    
T  5015 atagtaaatttttatggaaaattatgcattcaatgcatgggaaattgaaatgttaaacttttttaaggaataattttttaatt 5097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 122457 - 122563
Alignment:
Q  226 cattctttacggactttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaa 325  Q
    ||||||||| ||| ||||  |||||| ||||||| |||| || |||||| |||| |||||||||| || | ||| ||||||||||  |||||||||||||    
T  122457 cattctttaaggattttaagtagtaattttttatggaaaattgtgcatttaatgcatcggaaattaaagtgttaaactttttcaaagaataatttcttaa 122556  T
Q  326 tttagaa 332  Q
    || ||||    
T  122557 ttgagaa 122563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 461
Target Start/End: Original strand, 199665 - 199713
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  199665 aggcttaattgcacttttggccccctatgtttcaagaagttacgatttt 199713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 3440 - 3385
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||||| ||||| || ||||||||| ||||||||||||||||| |||||||    
T  3440 gcttaattgcacttttggcctcctatgttttaagaagttgcgattttggcccccta 3385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 1844 - 1891
Alignment:
Q  415 gcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    ||||||||||| ||||| || ||||||||||||||||||| |||||||    
T  1844 gcttaattgcatttttggcctcctatgtttcaagaagttgagattttg 1891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2010
Description:

Target: scaffold2010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 491 - 549
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| |||||||||||||| |||  | |||||||||||||| |||||||    
T  491 aaggcttaattgcacttttgaccccctatcttttcaaaagttgcgattttggcccccta 549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 405508 - 405452
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    ||||||||| |||||||| || ||| | ||||||||||||||||||||||||||||||    
T  405508 aggcttaatagcagttttaactcccaa-gtttcaagaagttgcgattttgacccccta 405452  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 25585 - 25640
Alignment:
Q  261 gaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaata 316  Q
    ||||||| | |||||| || |||| |||||||||||||||||| ||||||||||||    
T  25585 gaaatttgtacattcactgcatcgaaaattgaaatattagactctttcaataaata 25640  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 466
Target Start/End: Original strand, 201304 - 201359
Alignment:
Q  411 taaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgaccc 466  Q
    ||||||||||||||||||||||||||||| || |||  |  |||||||||||||||    
T  201304 taaggcttaattgcagttttgaccccctaagtatcacaatcttgcgattttgaccc 201359  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 22787 - 22838
Alignment:
Q  412 aaggcttaattgcagttttga-ccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||| |||||  ||||||||||||| ||||||||||||||||    
T  22787 aaggcttaattgcacttttggtccccctatgtttctagaagttgcgattttg 22838  T

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Target: scaffold1301 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 1363 - 1305
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||||| ||||| |||| ||| |||| | |||||||||||||| |||||||    
T  1363 aaggcttaattgcacttttggccccttatctttccaaaagttgcgattttggcccccta 1305  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 450
Target Start/End: Original strand, 21164 - 21201
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaa 450  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  21164 aaggcttaattgcagttttga-cccctatgtttcaagaa 21201  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 32325 - 32267
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| | ||||| |||||||| |||| | |||||||||||||| |||||||    
T  32325 aaggcttaattgtacttttggccccctatctttccaaaagttgcgattttggcccccta 32267  T

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Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 31979 - 32035
Alignment:
Q  414 ggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttgacccccta 470  Q
    |||||||||||| ||||| |||||||| |||| | ||||||| |||||| |||||||    
T  31979 ggcttaattgcacttttggccccctatctttccaaaagttgcaattttggcccccta 32035  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 122645 - 122595
Alignment:
Q  412 aaggcttaattgcagttttgaccccctatgtttcaagaagttgcgattttg 462  Q
    |||||||||||||| ||||| |||||||| |||| | ||||||||||||||    
T  122645 aaggcttaattgcacttttggccccctatctttccaaaagttgcgattttg 122595  T

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Target: scaffold0725 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 6746 - 6698
Alignment:
Q  413 aggcttaattgcagttttgaccccctatgtttcaagaagttgcgatttt 461  Q
    ||||||||| ||||||||  ||||||| ||||||| |||||||||||||    
T  6746 aggcttaatagcagttttagccccctaagtttcaacaagttgcgatttt 6698  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 18114 - 18214
Alignment:
Q  239 ctttagatagtaagtttttattgaaatttatgcattcaatggatcggaaattgaaatattagactttttcaataaataatttcttaatttagaatcctta 338  Q
    ||||| |||||||||||||    || |||||| | |||||| ||||| |||||||||||| |||||||| |  | ||||||||||  ||||| |||||||    
T  18114 ctttaaatagtaagttttttaaaaagtttatgtaatcaatgtatcgggaattgaaatatttgacttttttatgacataatttcttcttttagcatcctta 18213  T
Q  339 a 339  Q
    |    
T  18214 a 18214  T

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