View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1390_low_48 (Length: 461)
Name: NF1390_low_48
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1390_low_48 |
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[»] scaffold0059 (2 HSPs) |
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[»] scaffold0013 (2 HSPs) |
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[»] scaffold0029 (2 HSPs) |
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[»] scaffold0308 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 40806396 - 40806656
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
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|
|||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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|
T |
40806396 |
ggatgacttttacactgaaccgcacggtttg-----atttgcggtttgcatctcagcaactgaaccaaaccaaaccaaaccgcaagaataatgaatatta |
40806490 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatcaggttcgattctaattcctttccatct |
385 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
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|
T |
40806491 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcgattttttcattgttgcaacaggttcgattctaattcctttccatct |
40806590 |
T |
|
Q |
386 |
ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
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|
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| |
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|
T |
40806591 |
ctttcaattcatttccaatgataaatttgtttcctttactttccaataatttgtttcatgcttatg |
40806656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 6333832 - 6333560
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagcc-----aaaccgcaagaataatgaat |
281 |
Q |
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|
||||||||||||| |||||||| || ||||||||||||||||| |||||||| |||||| |||||||||||| || |||||||||||||||||||| |
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T |
6333832 |
gatgacttttacactgaaccgcgcgattcggttcgatttgcggcttgcatcttagcaaccgaaccaaaccaaaccaaactaaaccgcaagaataatgaat |
6333733 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt |
378 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| || |
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|
T |
6333732 |
attacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccatcgttgcaccatcaggttcgattctaattcatt |
6333633 |
T |
|
Q |
379 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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|
T |
6333632 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
6333560 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 188 - 451
Target Start/End: Original strand, 30193553 - 30193819
Alignment:
Q |
188 |
atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact |
287 |
Q |
|
|
||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| |
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|
T |
30193553 |
atgacttttgcaatgaaccgtgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccataccgcaagaataatgaatattact |
30193652 |
T |
|
Q |
288 |
taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc |
384 |
Q |
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|||||||||| || | ||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||| |
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T |
30193653 |
taaatatgtattatcccaattacatagctcaagaataatttcttttgattcgatttttccattgttgcaccatcaggttcgattttaattcctttccatc |
30193752 |
T |
|
Q |
385 |
tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
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|
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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|
T |
30193753 |
tctttcaattcatttacagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
30193819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 32137203 - 32136936
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||||| |
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|
T |
32137203 |
gatgacttttgcaatgaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccacaagaatgatgaatattac |
32137104 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat |
383 |
Q |
|
|
||||| |||||||||| ||||||||||||| ||||||||| |||||| |||| ||||||||||||||| |||||||||||||| |||||||||||||| |
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T |
32137103 |
ttaaacatgtactagcccaattacatagcttaagaataatttctttttattcgattttttcattgttgcaccatcaggttcgattttaattcctttccat |
32137004 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| |||| |
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|
T |
32137003 |
ctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaatcatttgtttcatgcttatg |
32136936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 186 - 444
Target Start/End: Complemental strand, 48996591 - 48996330
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
T |
48996591 |
ggatgacttttgcaatgaaccgcgcggttcggtttgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta |
48996492 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |
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|
T |
48996491 |
cttaaacatgtactagcctaattacatagcctaagaataatctcttttgattcgattttttcattgttgcaccatcaaattcgattctaattcctttcca |
48996392 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat |
444 |
Q |
|
|
||||||||||| |||| ||||||| |||||||||| ||| ||| |||||||||||||||| |
|
|
T |
48996391 |
cctctttcaatttattttcagtgataaatttgtttcattttcttctcaataatttgtttcat |
48996330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 186 - 446
Target Start/End: Original strand, 40899655 - 40899918
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| | |||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |
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|
T |
40899655 |
ggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta |
40899754 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| ||||| |||| |||||||||||| |||| ||||||||||||||||| |||||| |||||||| ||||| ||| ||||||||||||||||| |
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|
T |
40899755 |
cttaaacatgtaatagcccaattacatagcccaaggataatctcttttgattcgatttttccattgttgcaccatcaaattcaattctaattcctttcca |
40899854 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |
|
|
T |
40899855 |
tctctttaaattcatttccagtgatgaatttatttcctttacttaccaataatttgattcatgc |
40899918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 189 - 451
Target Start/End: Complemental strand, 52345216 - 52344952
Alignment:
Q |
189 |
tgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactt |
288 |
Q |
|
|
|||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
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|
T |
52345216 |
tgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattactt |
52345117 |
T |
|
Q |
289 |
aaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg--catcaggttcgattctaattcctttccatctc |
386 |
Q |
|
|
||| ||||||||| | ||| ||||||||||||||| || ||||||||| |||||| |||| ||| |||||||||||||||||| | |||||| ||| |
|
|
T |
52345116 |
aaacatgtactagtccgattgcatagctcaagaatagtcgcttttgatttgatttttccattattgcacatcaggttcgattctaacttatttccaactc |
52345017 |
T |
|
Q |
387 |
tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
52345016 |
tttcaattcatattcactgatgaatttgtttcctttactttccaataatttgtttcatgcttatg |
52344952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 10219185 - 10218927
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
|||||||||||||| |||||||| |||||||||| | |||||||||||||||||| | |||||||||| |||||||||||||||||||||| |
|
|
T |
10219185 |
ggatgacttttacactgaaccgcgcggttcggtttggtttgcggtttgcatctcaa-----gtaccaaaccaa-----accgcaagaataatgaatatta |
10219096 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||| ||||||||||||||||||||||| |
|
|
T |
10219095 |
cttaaacatgtactagcccaattacatagctcaagaataatctcatttgattagatttttccattgttgcaccatctggttcgattctaattcctttcca |
10218996 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| |||| |
|
|
T |
10218995 |
tctctttcaattcattttcagtgatgaatttgtttcttttacttctcaataatttgtttcatgcttatg |
10218927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 451
Target Start/End: Original strand, 23937130 - 23937361
Alignment:
Q |
223 |
tttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa |
322 |
Q |
|
|
|||| ||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||| || |||||| |||||||||| |||||||| |
|
|
T |
23937130 |
tttgtggtttgcatctcaacaactgaaccaaaccaaactaaaccgcaagaataataaatattacttaaacatatactagtccaattacataactcaagaa |
23937229 |
T |
|
Q |
323 |
taatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcc |
419 |
Q |
|
|
|||||||||| |||| |||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
23937230 |
taatctctttagatttgatttttccattgttgcaccatcatgttctattctaattcctttccatctctttcaattcatttctagtgatgaatttgtttca |
23937329 |
T |
|
Q |
420 |
tttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||| || ||||||||||||||||||| |||| |
|
|
T |
23937330 |
tttatttcccaataatttgtttcatgcttatg |
23937361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 188 - 451
Target Start/End: Original strand, 8176185 - 8176441
Alignment:
Q |
188 |
atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact |
287 |
Q |
|
|
||||||||| || |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |
|
|
T |
8176185 |
atgacttttgcactgaaccgcgtcgttcggttcgatttgcggtttgcatctcagcaac----------caaaccaaaccgcaagaataatgaagattact |
8176274 |
T |
|
Q |
288 |
taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc |
384 |
Q |
|
|
|||| |||||||||| |||||||||||| ||| |||||||||||||||||| |||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
T |
8176275 |
taaacatgtactagcccaattacatagcccaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgatcctaattcctttccatc |
8176374 |
T |
|
Q |
385 |
tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||| ||||||||| |||| |||||||| |||| ||| ||| ||||||||||||||||||| |||| |
|
|
T |
8176375 |
tcttttaattcattttcagttatgaatttttttctttttcttcccaataatttgtttcatgcttatg |
8176441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 31301900 - 31301643
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || |||||| || ||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| |
|
|
T |
31301900 |
gatgactttt-cactgaaccacatggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaacc----------gcaagaataatcaatattac |
31301812 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttg-attcaattttttcattgttgca---tcaggttcgattctaattcctttcca |
382 |
Q |
|
|
||||| |||| |||| |||||||||| |||||||||||| | |||| |||| | ||||||||||||||| |||| |||||||||||||| |||||| |
|
|
T |
31301811 |
ttaaacttgtattagcccaattacataactcaagaataattttttttttattcgactttttcattgttgcaccatcagtttcgattctaattcatttcca |
31301712 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
T |
31301711 |
tctccttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatg |
31301643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 224 - 451
Target Start/End: Complemental strand, 43631007 - 43630795
Alignment:
Q |
224 |
ttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaat |
323 |
Q |
|
|
|||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||| |
|
|
T |
43631007 |
ttgcggttgacatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaaaatgtaatagcccaactacatagctcaagaat |
43630908 |
T |
|
Q |
324 |
aatctcttttgattcaattttttcattgttgcatcag---gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcct |
420 |
Q |
|
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
43630907 |
------------------tttttcattgttgcaccattaagttcgattctaattcctttccatctctttcaattcatttgcagtgatgaatttgtttcct |
43630826 |
T |
|
Q |
421 |
ttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||| ||||||||||||||||||| |||| |
|
|
T |
43630825 |
ttacttcccaataatttgtttcatgcttatg |
43630795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 335
Target Start/End: Complemental strand, 52345363 - 52345214
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || ||||||||||| | |||| |||| ||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||| |
|
|
T |
52345363 |
cacttggttcggatgacttttgtactgaatcgcatggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaacc----------gcaagaata |
52345274 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttga |
335 |
Q |
|
|
|||||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||| |
|
|
T |
52345273 |
atgaatattacttaaacatgtactagcccaattgcatagctcaagaatagtcgcttttga |
52345214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 29640083 - 29639994
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
29640083 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
29639994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 50570593 - 50570682
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
50570593 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
50570682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 293
Target Start/End: Original strand, 26477764 - 26477871
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| | | ||||| |||||||||| | ||||||||||||||||||||||| |||||||||||| |||| || |||||||||||||||||| |
|
|
T |
26477764 |
ggatgacttttgtactaaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaatccacaagaataatgaatatta |
26477863 |
T |
|
Q |
286 |
cttaaata |
293 |
Q |
|
|
|||||||| |
|
|
T |
26477864 |
cttaaata |
26477871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 29639828 - 29639732
Alignment:
Q |
325 |
atctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttc |
418 |
Q |
|
|
||||| ||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
T |
29639828 |
atctcctttaattcgatttttccattgttgcatcatcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttc |
29639732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 42558171 - 42558082
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
42558171 |
ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
42558082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 29643342 - 29643431
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||| || ||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
29643342 |
ggatgacttttaaactgaaccgcgcggttcggttcggtttgtggcttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
29643431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 36078772 - 36078683
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
36078772 |
ggatgacttttagactgaaccgcgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
36078683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 5261427 - 5261517
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataat |
277 |
Q |
|
|
|||||||||| || |||||||| |||||||||||| ||||||||||||||||||| || |||||||| ||| |||||| ||||||||||| |
|
|
T |
5261427 |
gatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagaaatcgaaccaaatcaaaccaaactgcaagaataat |
5261517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 40806239 - 40806292
Alignment:
Q |
35 |
atgtgacacggatacttcaccattttaaaaattcgcatgcttaagagttttcat |
88 |
Q |
|
|
||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| |
|
|
T |
40806239 |
atgtgacacggatactttaccattttaaaagttcacatgcttaagagttttcat |
40806292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 13852818 - 13852552
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
T |
13852818 |
ggatgacttttgcactgaaccgagtggttcggttctgtttgcggtttgcatctcagcaactgaaccaaaccaaaccaaactgcaagaataatgaatatta |
13852719 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgtt-gcatcaggttcgattctaattcctttccatc |
384 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
T |
13852718 |
tttaaatatgtactaactcaattacatagctcaagaataatctcttttgattcgattttttcattgttaccatcaggttcgattataattcctttccatc |
13852619 |
T |
|
Q |
385 |
tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
13852618 |
tctttcaattcatttacagtgatgaatttgtttcctttactttccaataatttgtttcatgcttatg |
13852552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 24360866 - 24361132
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || ||||| ||| |||||||||| || |||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||| |
|
|
T |
24360866 |
ggatgacttttgcacagaaccacacagttcggttcggtt--cggtttgcgtctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgactatta |
24360963 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||| |
|
|
T |
24360964 |
cttaaatatgtactagcccaattacatagctcaagaataatcccttttgattcgattttttcattgttgcaccatcaagttcaattctaattcctttcca |
24361063 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
24361064 |
tttctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
24361132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 186 - 446
Target Start/End: Complemental strand, 43429680 - 43429417
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || | ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| |
|
|
T |
43429680 |
ggatgacttttgcactaaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgactatta |
43429581 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||| | ||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||| |
|
|
T |
43429580 |
cttaaacgtgtactcgtccaattacatagctcaagaaaaatctcttttgattcgatttttccattgttgcaccatcaggttcaattctaattcctttcca |
43429481 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
43429480 |
tctctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc |
43429417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 32824098 - 32823846
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |
|
|
T |
32824098 |
ggatggcttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaac----------caaaccaaaccgcatgaataatgaatatta |
32824009 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||| |
|
|
T |
32824008 |
cttaaacatgtactagcccaattacatagctcaagaataatctcctttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca |
32823909 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||| |||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||| |
|
|
T |
32823908 |
tctatttcaattcattctcactgatgaatttgtttcatttactttccaataatttgcttcatg |
32823846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 186 - 441
Target Start/End: Original strand, 31876217 - 31876470
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| |||||||||| ||||||| || | ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |
|
|
T |
31876217 |
ggatgacttttgcaatgaaccgtgcggttcgatttggtttgcggtttgcatctcagcaac-----caaaccaaaccaaaccgcaaaaataatgaatatta |
31876311 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| || ||||||||||||||||||||||||||| |||| |||||| |||||||| |||||| |||||||||||||| |||||| |
|
|
T |
31876312 |
cttaaacatgtactagcccagttacatagctcaagaataatctcttttaattcgatttttccattgttgcaccatcagattcgattctaattcttttcca |
31876411 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgttt |
441 |
Q |
|
|
||||||| ||||||||||||||||||| |||||||||||||||| | |||||||||||| |
|
|
T |
31876412 |
tctcttttaattcatttccagtgatgactttgtttcctttacttccaaataatttgttt |
31876470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 253 - 451
Target Start/End: Complemental strand, 22366895 - 22366694
Alignment:
Q |
253 |
aaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgt |
352 |
Q |
|
|
|||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||| |
|
|
T |
22366895 |
aaccaaaccaaaccgcaagaataatgaatattactcaaacatgtactagcccaattacatagctcaagaataatctctttcaattcggtttttccattgt |
22366796 |
T |
|
Q |
353 |
tgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgccta |
449 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
T |
22366795 |
tgcaccatcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgctta |
22366696 |
T |
|
Q |
450 |
tg |
451 |
Q |
|
|
|| |
|
|
T |
22366695 |
tg |
22366694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 186 - 405
Target Start/End: Original strand, 42910252 - 42910469
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
42910252 |
ggatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta |
42910346 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||| |
|
|
T |
42910347 |
cttaaacatgtactagcccaattacatagctcaagaataatctcttttgatttgatttttccattgttgcaccatcaggtccgattctaattcctttcca |
42910446 |
T |
|
Q |
383 |
tctctttcaattcatttccagtg |
405 |
Q |
|
|
||||||||||||||||||||||| |
|
|
T |
42910447 |
tctctttcaattcatttccagtg |
42910469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 186 - 444
Target Start/End: Original strand, 36921127 - 36921385
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
|||| |||||| || |||||| | |||||||||| | ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
36921127 |
ggattacttttgcattgaaccacgcggttcggtttggtttgcagtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta |
36921221 |
T |
|
Q |
286 |
cttaaatatgtactagctc--aattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttc |
380 |
Q |
|
|
|||||| |||||||| | | ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
36921222 |
cttaaacatgtactaacccccaattacatagctcaagaataatcgcttttgattcgattttttcattgttgcaccatcaggttcgattctaattcttttc |
36921321 |
T |
|
Q |
381 |
catctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat |
444 |
Q |
|
|
||||||||||||||||||| || |||| |||||||||| ||||||| ||||||||||||||||| |
|
|
T |
36921322 |
catctctttcaattcattttcaatgataaatttgtttcttttacttcccaataatttgtttcat |
36921385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 442
Target Start/End: Complemental strand, 10070065 - 10069816
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||||| |||| ||||| |||||| |||||||||||||||| ||| |||||||||||||||||| ||||||| |
|
|
T |
10070065 |
ggatgacttttgcactgaaccgcacagttcagttcggtttgcgatttgcatctcagcaac----------caaaccaaaccgcaagaataatcaatatta |
10069976 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| ||||| || |||||||||||| |||||||||||| |||||||| |||||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
10069975 |
cttaaacttgtaccggcccaattacatagcccaagaataatcttttttgatttgatttttccattgttgcaccatcaggtttgattctaattcctttcca |
10069876 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc |
442 |
Q |
|
|
|||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |
|
|
T |
10069875 |
tctccttcaattcatttccaatgatgaatttgtttccttttcttcccaataatttgtttc |
10069816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 47903731 - 47903478
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| | ||||| |||| ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||| |
|
|
T |
47903731 |
ggatgacttttgcactgaaccgcgcagttcgtttcggtttgcggtttgcatctcagcaaccgaaccaaaacaacccaaaccacaagaataatgaata--- |
47903635 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca |
382 |
Q |
|
|
||||| |||||||||||||||||||| | | ||| ||||| ||||||||||||||||| |||||||||||| |||||| |||||| |
|
|
T |
47903634 |
------------ctagccaaattacatagctcaagaatactatttttcgattcgattttttcattgttgcaccatcaggttcgattataattcatttcca |
47903547 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| |
|
|
T |
47903546 |
tatctttcaattcatttccagtgatgaatttgtttcctttatttcccaataatttgtttcatgcttatg |
47903478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 239 - 445
Target Start/End: Complemental strand, 48675571 - 48675362
Alignment:
Q |
239 |
cagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattc |
338 |
Q |
|
|
||||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||| |||| |||||||||||| || ||||| |||||||| || |
|
|
T |
48675571 |
cagcaactgaaccaaacaaaatcaaaccgtaagaataataaatattacttaaacatgtattagcctaattacatagctaaaaaataacctcttttggttt |
48675472 |
T |
|
Q |
339 |
aattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataat |
435 |
Q |
|
|
||| || |||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | |||||| |
|
|
T |
48675471 |
gattattccattgttgcaccatcaggtttgattctaattcatttccatctctttgaattcattttcagtgatgaatttgtttcctttacttcctaataat |
48675372 |
T |
|
Q |
436 |
ttgtttcatg |
445 |
Q |
|
|
|||||||||| |
|
|
T |
48675371 |
ttgtttcatg |
48675362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 223 - 356
Target Start/End: Original strand, 27054336 - 27054469
Alignment:
Q |
223 |
tttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa |
322 |
Q |
|
|
|||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
T |
27054336 |
tttgcggtttgcatatcagcaatcgaaccaaaccaaaccaaaccacaagaataatgaatattacttaaatatgtactagcccaattacataactcaagaa |
27054435 |
T |
|
Q |
323 |
taatctcttttgattcaattttttcattgttgca |
356 |
Q |
|
|
|||||||||||||||| ||||||||||||||||| |
|
|
T |
27054436 |
taatctcttttgattcgattttttcattgttgca |
27054469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 186 - 356
Target Start/End: Original strand, 18672791 - 18672961
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
|||||| |||| || || ||||| | |||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||| |
|
|
T |
18672791 |
ggatgatttttgcattggaccgcgcagttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaataataatcaatatta |
18672890 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca |
356 |
Q |
|
|
|||||| ||||||||| |||||||||||| || |||||||||||||||||| |||||| ||||||||| |
|
|
T |
18672891 |
cttaaacttgtactagcccaattacatagcacaggaataatctcttttgattagatttttctattgttgca |
18672961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 187 - 445
Target Start/End: Original strand, 31982243 - 31982480
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || ||||| || ||||| |||| |||||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||| |
|
|
T |
31982243 |
gatgacttttgcactgaactgcgcggtttggtttgatttgcggtttgcatcttagcaac----------caaaccaaaccgcaaaaataatcaatattac |
31982332 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat |
383 |
Q |
|
|
|||||| ||||| ||| |||||||||||| ||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||| |
|
|
T |
31982333 |
ttaaatttgtaccagcccaattacatagcccaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattctaattcctt----- |
31982427 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
T |
31982428 |
---------ttcattttcagtgatgaatttgtttccttttcttcccaataatttgtttcatg |
31982480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 5933101 - 5932980
Alignment:
Q |
210 |
cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta |
309 |
Q |
|
|
|||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||| || |||||||||| ||||||| |||||||||| |||||| |
|
|
T |
5933101 |
cggttcggttcggtttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaatcgtaagaataatg------acttaaacatgtactagcccaatta |
5933008 |
T |
|
Q |
310 |
catagctcaagaataatctcttttgatt |
337 |
Q |
|
|
||||||||||||||||||||||| |||| |
|
|
T |
5933007 |
catagctcaagaataatctctttcgatt |
5932980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 3211777 - 3211866
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
3211777 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
3211866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 47070116 - 47070027
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
47070116 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
47070027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 47204093 - 47204181
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
47204093 |
gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
47204181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 10672267 - 10672178
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
10672267 |
ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
10672178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 11206013 - 11206083
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaacc |
256 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
T |
11206013 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaacc |
11206083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 12118048 - 12117959
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||| | ||||||||| |||| |
|
|
T |
12118048 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaaccgcaaaaata |
12117959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 8768301 - 8768373
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa |
258 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||| |
|
|
T |
8768301 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaa |
8768373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 36509024 - 36508932
Alignment:
Q |
361 |
gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatgct |
453 |
Q |
|
|
||||||||||| || ||||||||||| ||||||| |||| | |||||||||||||||||||| || |||||||||||||||| || |||||| |
|
|
T |
36509024 |
gttcgattctatttgctttccatctccttcaattaattttcggtgatgaatttgtttccttttctccccaataatttgtttcaggcttatgct |
36508932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 18672962 - 18673033
Alignment:
Q |
380 |
ccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||| |||| |
|
|
T |
18672962 |
ccatctccttcaattcatttccattgatgaatttgtttccttttcttccaaataatttgtttcatgcttatg |
18673033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 5932948 - 5932888
Alignment:
Q |
391 |
aattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||| |||||||||||||||||||||||||||| |||||||| |||| ||| |||| |
|
|
T |
5932948 |
aattcattttcagtgatgaatttgtttcctttactttctaataatttatttcttgcttatg |
5932888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 36509084 - 36509024
Alignment:
Q |
260 |
ccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaag |
320 |
Q |
|
|
|||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| |||| |
|
|
T |
36509084 |
ccaaaccgcaagaataatcaatattacttaaatttgtacgagcccaattacatagcccaag |
36509024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 446
Target Start/End: Original strand, 27054549 - 27054586
Alignment:
Q |
409 |
aatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
T |
27054549 |
aatttgtttcctttacttcccaataatttgtttcatgc |
27054586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 33474953 - 33474685
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| |||||||||||| |||| | ||||||||||| |||| |||||||||||| |||||| |||||||||| |||||||| |
|
|
T |
33474953 |
ggatgacttttgcactgaaccgcgcggttcggttcggtttgtgatttgcatctcatcaaccgaaccaaaccaaaccaaactgcaagaataacgaatatta |
33474854 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
33474853 |
cttaaatatgtactagcccaattacatagctcaagaataatctcttttgatttgattttttcattgttgcgtcatcaggttcgattctaattcctttcca |
33474754 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |
|
|
T |
33474753 |
tctctttcaattcatttccagtgatgaatttgtttcctttacatcccaataatttgtttcatgcttatg |
33474685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 182 - 451
Target Start/End: Original strand, 33910343 - 33910615
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||||||||||||| || |||||||| |||||||||| | ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |
|
|
T |
33910343 |
atttggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagtaatcaaaccaaaccaaaccaaaccgcaagaataatgaat |
33910442 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt |
378 |
Q |
|
|
||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| || |
|
|
T |
33910443 |
attacttaaatatgtactagcccaattacataacttaagaataatctcttttgattcgatttttccaatgttgcaccatcaggttcgattctaattcttt |
33910542 |
T |
|
Q |
379 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
33910543 |
tccatctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
33910615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 182 - 451
Target Start/End: Original strand, 39256202 - 39256474
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||||||||||||| || ||||| || ||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
39256202 |
atttggatgacttttgcactgaactgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaat |
39256301 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt |
378 |
Q |
|
|
|||||||||| |||||||||| |||||||||||||| ||||||||| ||| ||||| |||||| |||||||| |||||||||||||||||||||||| |
|
|
T |
39256302 |
attacttaaacatgtactagccaaattacatagctcacgaataatctttttcgattcgatttttccattgttgcaccatcaggttcgattctaattcctt |
39256401 |
T |
|
Q |
379 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||| |
|
|
T |
39256402 |
tccatctctttcaattcatttccaatgatgaatttgtttcctttatttcccaataatttgtttcatgcttatg |
39256474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 24910624 - 24910892
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || ||||||| | ||||||||| |||| |||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |
|
|
T |
24910624 |
ggatgacttttgcattgaaccgtgcagttcggttcagtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccggaagaataatgaatatta |
24910723 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||| |
|
|
T |
24910724 |
cttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttcaattgttgcaccatcaggttcgattctaatttctttcca |
24910823 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
24910824 |
tctctctcaattcatttcgagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
24910892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 182 - 451
Target Start/End: Complemental strand, 45692307 - 45692040
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||| |
|
|
T |
45692307 |
atttggatgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaacaa-----accgcaagaataataaat |
45692213 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt |
378 |
Q |
|
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
T |
45692212 |
attacttaaatatgtactagtccaattacataactcaagaataatctcttttgattcaattttttcattgttgcaccattaggttcgattctaattcctt |
45692113 |
T |
|
Q |
379 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||||||| ||| ||||||||| | |||||||||| | ||||||||| ||||||| |||| |
|
|
T |
45692112 |
tccatctctttcaattcatttacagagatgaatttatatcctttacttcctaataatttgcttcatgcttatg |
45692040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 16529101 - 16529330
Alignment:
Q |
225 |
tgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaata |
324 |
Q |
|
|
||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| |||||||| |
|
|
T |
16529101 |
tgcggtttgcatctcagcaaccaaaccaaaccaaaccaaaccgcaagaatagtgaatattacttaaacatgtaatagcccaattacatagcccaagaata |
16529200 |
T |
|
Q |
325 |
atctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctt |
421 |
Q |
|
|
|||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
T |
16529201 |
atctcttttgattcgaatttttcattgttgcaccatcaggttcgattctaattcctttccatctctttcaattcatttccagggatcaatttgtttcctt |
16529300 |
T |
|
Q |
422 |
tactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
| ||| | ||||||||||||||||| |||| |
|
|
T |
16529301 |
ttcttccaaataatttgtttcatgcttatg |
16529330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 176 - 451
Target Start/End: Complemental strand, 32954596 - 32954323
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || ||||||||||| || | ||||||||||||| ||||| || |||||||||||||||||||| |||||||||||| ||| | |||||| |
|
|
T |
32954596 |
cacttggttcggatgacttttgcactaaaccgcacggttccgttcggttcgcggtttgcatctcagcaaccgaaccaaaccaaaccata-----agaata |
32954502 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaa |
372 |
Q |
|
|
|||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| |||||||||| |||||||| ||||||| |
|
|
T |
32954501 |
atgaatattacttaaacatgtacaagcccaattacatagctcaagaataatttctttcgattcgatttttccattgttgcaccatcaggttcaattctaa |
32954402 |
T |
|
Q |
373 |
ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|| ||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
T |
32954401 |
ttactttccaactctttcaattcattttcagtgatgaatttgtttcctttacttcataataatttgtttcatgcttatg |
32954323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 187 - 451
Target Start/End: Original strand, 1160605 - 1160856
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
1160605 |
gatgacttttgcactgaaccgcacgattcggttcgatttgcggtt-gcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaata---- |
1160699 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat |
383 |
Q |
|
|
||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
T |
1160700 |
-----------ctagccaaattacatagctcaagaataatctttttcgattcaatttttccattgttgcaacatcaggtacgattctaattcctttccat |
1160788 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||| |
|
|
T |
1160789 |
ctctttcaattcatttccagtgatgattttgtttcctttatttcccaataatttgtttcatgcttatg |
1160856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 51252001 - 51252259
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| | |||||||| | ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| |
|
|
T |
51252001 |
ggatgacttttgcaatgaaccgcgcagttcggtttggtttgcggtttgcatctcagcaac----------caaaccaacccgcaagaataatgaatatta |
51252090 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||| || |||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||| |
|
|
T |
51252091 |
cttaaacatgtactagcctaattacatagccaaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca |
51252190 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||| || |||||||||| ||| ||| ||||||||||||||||||| |||| |
|
|
T |
51252191 |
tctctttcaattcatttccagttataaatttgtttcattttcttcccaataatttgtttcatgcttatg |
51252259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 264 - 446
Target Start/End: Complemental strand, 44918975 - 44918790
Alignment:
Q |
264 |
accgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcag |
360 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||| |
|
|
T |
44918975 |
accgcaagaataatgaatattacttaaacatgtactagtccaattacatagctcaagaataatcttttttgatttgatttttccattgttgctccatcaa |
44918876 |
T |
|
Q |
361 |
gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
T |
44918875 |
gttcgattctaattcttttccatctctttcgattcatttccagtgattaatttgtttcctttacttcccaataatttgtttcatgc |
44918790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 11899521 - 11899381
Alignment:
Q |
216 |
ggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc |
315 |
Q |
|
|
|||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11899521 |
ggtttgatttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc |
11899422 |
T |
|
Q |
316 |
tcaagaataatctcttttgattcaattttttcattgttgca |
356 |
Q |
|
|
||||||||||||| |||||||| |||||| |||||||||| |
|
|
T |
11899421 |
tcaagaataatcttttttgatttgatttttccattgttgca |
11899381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 290 - 446
Target Start/End: Complemental strand, 29389440 - 29389281
Alignment:
Q |
290 |
aatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctc |
386 |
Q |
|
|
|||||||| || || ||||||| | ||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
29389440 |
aatatgtattatctgaattacacaactcaagaataatctcttttaattcgatttttccattgttgcaccatcaggttcgattctaattcctctccatctc |
29389341 |
T |
|
Q |
387 |
tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|||||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| |
|
|
T |
29389340 |
tttcaactcatttccagggatgaacttgtttcttttacttcccaataatttgtttcatgc |
29389281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 182 - 328
Target Start/End: Original strand, 6722389 - 6722529
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |
|
|
T |
6722389 |
atttggatgacttttgcattgaactttgcggttcgattcgatttgcggtttgcatctcagcaaccgaaccaaa-----ccaaaccgcaag-ataatgaat |
6722482 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatct |
328 |
Q |
|
|
|||||||||| ||||||| | ||||||||||||||||||||||||| |
|
|
T |
6722483 |
attacttaaacatgtactgacccaattacatagctcaagaataatct |
6722529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 5154958 - 5155057
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
5154958 |
cacttggttcggatgacttttagactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
5155057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 8211738 - 8211639
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
8211738 |
cacttggttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
8211639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 20494193 - 20494094
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || |||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
20494193 |
cacttggttcggatgacttttagactgaaccgcgcggttcggttcgatttgctgtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
20494094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 29707717 - 29707801
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
29707717 |
ggatgacttttagactgaaccgcacggttcggtt-----tgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
29707801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 29390191 - 29390137
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctca |
240 |
Q |
|
|
||||||||||| || |||||||| |||||||||||| |||||||||||||||||| |
|
|
T |
29390191 |
ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctca |
29390137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 446
Target Start/End: Complemental strand, 11899301 - 11899264
Alignment:
Q |
409 |
aatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |
|
|
T |
11899301 |
aatttgtttcctttactttccaataatttgtttcatgc |
11899264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 216 - 451
Target Start/End: Original strand, 13801578 - 13801816
Alignment:
Q |
216 |
ggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc |
315 |
Q |
|
|
|||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
13801578 |
ggttcggtttgcggtttgcatctcatcaactgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagcccaattacatagc |
13801677 |
T |
|
Q |
316 |
tcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatt |
412 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
T |
13801678 |
tcaagaataatctcttttgattcaatttttccattgttgcaccatcaggttcgattctaattccttttcatctctttcaattcatttccactgatgaatt |
13801777 |
T |
|
Q |
413 |
tgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||| |||||||||| |||||||| |||| |
|
|
T |
13801778 |
tgtttcctttacttcccaataatttatttcatgcttatg |
13801816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 191 - 444
Target Start/End: Complemental strand, 33550830 - 33550574
Alignment:
Q |
191 |
acttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaa |
290 |
Q |
|
|
|||||| || |||||||| ||||| |||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
T |
33550830 |
acttttgcactgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaagaataatgaatattacttaa |
33550731 |
T |
|
Q |
291 |
atatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctct |
387 |
Q |
|
|
| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||| |
|
|
T |
33550730 |
acatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcgatctct |
33550631 |
T |
|
Q |
388 |
ttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat |
444 |
Q |
|
|
|| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
T |
33550630 |
tttaattcatttctagtgatgaatttgtttccttttcttcccaataatttgtttcat |
33550574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 35039509 - 35039777
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| | |||||||| ||||| |||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| ||| |
|
|
T |
35039509 |
ggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaaccgcaagaataatgaatgtta |
35039608 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| |||||||| ||||| ||| ||||||||||||||||| |
|
|
T |
35039609 |
cttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaaattcaattctaattcctttcca |
35039708 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |
|
|
T |
35039709 |
tctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgcttatg |
35039777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 25137655 - 25137388
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| ||||| |||| | || ||||| ||||||||| |||| ||||||||| | ||||||| ||| |||||||||||||| |
|
|
T |
25137655 |
ggatgacttttgcactgaaccgcgcggtttggtttggtt-gcggtatgcatctcatcaaccgaaccaaactgaaccaaaccacaataataatgaatatta |
25137557 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||| | |||||||||||| |||||||||||||||||||||| ||||||||| | ||||| |||||||| |||||||||| ||||| |
|
|
T |
25137556 |
cttaaacatgtactatcccaattacatagcccaagaataatctcttttgattcgattttttcaatattgcaccatcaggttcaattctaattcatttcct |
25137457 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
T |
25137456 |
tctctttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatg |
25137388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 176 - 451
Target Start/End: Complemental strand, 15860249 - 15859972
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || |||||||||||||| ||||||| ||||||| || | ||||| ||||||| |||| |||| |||||||||||| |||||| ||||||||| |
|
|
T |
15860249 |
cacttggttcggatgacttttacactgaaccgtgcggttcgatttggtttgcagtttgcacctcaccaaccgaaccaaaccaaaccaaactgcaagaata |
15860150 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa |
372 |
Q |
|
|
|||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| | |||| |||||||| |||||| | ||||||||| |
|
|
T |
15860149 |
atgaatattaattaaacatgtactagcccaattacatagctcaagaataatctcttttgatt-agattttccattgttgcaccatcagttccgattctaa |
15860051 |
T |
|
Q |
373 |
ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||| |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
15860050 |
ttcttttctatctctttcaattcatttttagtgatgaatttgtttcctttacttctcaataatttgtttcatgcttatg |
15859972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 10591350 - 10591099
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| ||||||| |||| |||||||||||| ||||| |||| |||||||||||| | ||||||||||||||||||||||| |
|
|
T |
10591350 |
ggatgacttttgcactgaaccgcgcggttcgattcggtttgcggtttgcgtctcaacaacagaaccaaaccaaactgaaccgcaagaataatgaatatta |
10591251 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| ||||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
T |
10591250 |
cttaaacatgtaatagcccaattacatagctcaagaataatgtctttcgattcgattttttcattgttgtaccatcaggttcgattctaattcatttcca |
10591151 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||||||| ||||||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
10591150 |
tctcttt-----------cagtgattaatttgtttcttttacttcccaataatttgtttcatg |
10591099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 188 - 444
Target Start/End: Original strand, 10390613 - 10390858
Alignment:
Q |
188 |
atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact |
287 |
Q |
|
|
||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || |
|
|
T |
10390613 |
atgacttttgcactgaaccgcgcggttcggttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatagta-- |
10390710 |
T |
|
Q |
288 |
taaatatgtactagctcaattacatagctcaa-gaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat |
383 |
Q |
|
|
|| |||||| |||||||| ||||||||| ||| |||||||||||| |||||||||| |||| ||||||| |||||||||||||| |
|
|
T |
10390711 |
-------------gccaaattacgtagctcaaagaataatctttttcgattcaatttttccattgttgcaccatcagattcgattttaattcctttccat |
10390797 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat |
444 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
T |
10390798 |
ctctttcaattcatttccagtgatgaatttgtttcctttatttctcaataatttgtttcat |
10390858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 12270994 - 12270905
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
12270994 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
12270905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 5866653 - 5866742
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
||||| |||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
5866653 |
ggatgtcttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
5866742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 10493958 - 10494078
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||| ||||||||| || ||||||| ||||| |||| ||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||| | |
|
|
T |
10493958 |
atttgaatgacttttgcactgaaccgtgtagttcgattcggtttgcagtttgcatctcagcaactaaaccaaaccaaaccaaactgcaagaataatcgtt |
10494057 |
T |
|
Q |
282 |
attacttaaatatgtactagc |
302 |
Q |
|
|
||||||||| ||||||||| |
|
|
T |
10494058 |
gttacttaaacttgtactagc |
10494078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 10494223 - 10494262
Alignment:
Q |
378 |
ttccatctctttcaattcatttccagtgatgaatttgttt |
417 |
Q |
|
|
||||||||| |||||||||||| ||||||||||||||||| |
|
|
T |
10494223 |
ttccatctccttcaattcattttcagtgatgaatttgttt |
10494262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 186 - 452
Target Start/End: Original strand, 25297827 - 25298096
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| | ||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
T |
25297827 |
ggatgacttttgctttgaaccgcacggttcggtttggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta |
25297926 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||| ||||||| |
|
|
T |
25297927 |
cttaaacatgtactagcccaattacatagctcaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcgattctaatttctttcca |
25298026 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatgc |
452 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |
|
|
T |
25298027 |
tctctttcaatttatttccagtgatgaatttgtttcatttacttcccaataatttgtttcatgcttatgc |
25298096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 176 - 451
Target Start/End: Complemental strand, 44035831 - 44035553
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || ||||||||||| || |||||||| |||||||||| | ||| ||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
44035831 |
cacttggttcggatgacttttgcactgaaccgcgcggttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
44035732 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcaggttcgattctaa |
372 |
Q |
|
|
|||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |
|
|
T |
44035731 |
atgaatattacttaaacatgtactagctcagttacataactcaagaataatctcttttgattcgattttttcattgttgcacgatcaagttcgattctaa |
44035632 |
T |
|
Q |
373 |
ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||| |||| |
|
|
T |
44035631 |
ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttccaaatattttgtttcttgcttatg |
44035553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 11376392 - 11376130
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
T |
11376392 |
gatgacttttgcactgaaccgcgcggttcggttcggtttgcagtttgcatctcagcaactgaaccaaaccaa-----accgcaagaatactgaatattac |
11376298 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat |
383 |
Q |
|
|
||||| |||||||||||||||| |||||| ||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
T |
11376297 |
ttaaacatgtactagctcaattgcatagcccaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttccat |
11376198 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
11376197 |
ctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
11376130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 210 - 451
Target Start/End: Original strand, 17916453 - 17916699
Alignment:
Q |
210 |
cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta |
309 |
Q |
|
|
|||||||||| | |||| |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
17916453 |
cggttcggtttggtttgtggtttgcatctcagcaaccgagccaaaccaaaccaaaccgcaagaataatgaatattacttaaacatgtactagcccaatta |
17916552 |
T |
|
Q |
310 |
catagctcaagaataatctcttttgattcaattttttcattgttgcatc-----aggttcgattctaattcctttccatctctttcaattcatttccagt |
404 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||| |||| ||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
17916553 |
catagctcaagaataatctcttttgattcattttttccattattgcaccatcagaggttcgattataattcctttccatctctttcaattcatttccagt |
17916652 |
T |
|
Q |
405 |
gatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||| |||||||| | ||||||||||||||||| |||| |
|
|
T |
17916653 |
gatgaatttgttttctttacttccaaataatttgtttcatgcttatg |
17916699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 44979346 - 44979614
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
|||||| |||| || |||||||| ||||| | || | |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| ||| |
|
|
T |
44979346 |
ggatgaattttgcactgaaccgcgcggtttgatttggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta |
44979445 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||| || ||||||||||||||||||| |||||| |||||||| ||| |||||| ||||||||||||||||| |
|
|
T |
44979446 |
cttaaacatgtactagcccaattacatagcccaggaataatctcttttgattcgatttttccattgttgcaccatgaggttcaattctaattcctttcca |
44979545 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |
|
|
T |
44979546 |
tctcttttaattcatttccagtgatgaatttgtttccttttctttccaataatttgcttcatgcttatg |
44979614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 187 - 451
Target Start/End: Original strand, 19936697 - 19936959
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||| ||||| || ||||| || |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
T |
19936697 |
gatgtctttttcactgaactgcgcggttcggttcggtttgcagtttgtatctcagcaac-----caaaccaaaccaaaccgcaagaataatgaatattac |
19936791 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat |
383 |
Q |
|
|
||| | |||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||| |
|
|
T |
19936792 |
ttatacatgtactagctcaaatacatagctcaagaataatatattttgattcgattttttcattgttgcaccatcatgttcgattctaatttctttccat |
19936891 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
19936892 |
ctcattcaattcatttccagtgctgaatttgtttcctttacttcccaataatttgtttcatgcttatg |
19936959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 210 - 451
Target Start/End: Complemental strand, 34910792 - 34910552
Alignment:
Q |
210 |
cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta |
309 |
Q |
|
|
|||||||||| | ||| ||||||| |||| |||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||| | |||||| |
|
|
T |
34910792 |
cggttcggtttggtttacggtttgaatctgagcaaccgaaacaaaccaa-----accgcaagaataatgaatattacttaaacatgtactaacccaatta |
34910698 |
T |
|
Q |
310 |
catagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtga |
406 |
Q |
|
|
|||||| |||||||||| ||||||||||| |||||| |||||||| ||||| ||||||||||||||| ||| ||| ||| ||||||||||| | |||| |
|
|
T |
34910697 |
catagcccaagaataatatcttttgattcgatttttccattgttgcaccatcaagttcgattctaattcgttttcatttctctcaattcattttctgtga |
34910598 |
T |
|
Q |
407 |
tgaatttgtttcctttacttt-ccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||| |||| ||||||||||||||||||| |||| |
|
|
T |
34910597 |
tgaatttgtttccttttctttcccaataatttgtttcatgcttatg |
34910552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 188 - 380
Target Start/End: Complemental strand, 18360310 - 18360115
Alignment:
Q |
188 |
atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact |
287 |
Q |
|
|
||||||||| || |||||| | |||||||||| | ||| | ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| |
|
|
T |
18360310 |
atgacttttgcattgaaccacgcggttcggtttggtttacagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatcaatattact |
18360211 |
T |
|
Q |
288 |
taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttc |
380 |
Q |
|
|
|||| ||||||||| |||||||||||| | | |||||||||||||||||| |||||| |||||||| ||||| |||||||||||||| ||||| |
|
|
T |
18360210 |
taaacttgtactagcccaattacatagcccgaaaataatctcttttgattcgatttttccattgttgcaccatcatgttcgattctaatttctttc |
18360115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 325 - 451
Target Start/End: Complemental strand, 20420572 - 20420443
Alignment:
Q |
325 |
atctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctt |
421 |
Q |
|
|
||||| ||| |||| |||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |
|
|
T |
20420572 |
atctcctttaattcgatttttccattgttgcatcatcaggtttgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcatt |
20420473 |
T |
|
Q |
422 |
tactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
| ||| ||||||||||| ||||||| |||| |
|
|
T |
20420472 |
ttcttcccaataatttgattcatgcttatg |
20420443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 9811828 - 9811739
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
9811828 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
9811739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 20420866 - 20420777
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
20420866 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata |
20420777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16579078 - 16579006
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa |
258 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
16579078 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaactgaaccaaaccaa |
16579006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 36412932 - 36413021
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
36412932 |
ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata |
36413021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 42785091 - 42785191
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || ||||||||||| || |||||| | |||||||||| | ||||||||||||||||||| ||| |||||||||||| |||||||| ||||||| |
|
|
T |
42785091 |
cacttggttcggatgacttttgcattgaaccacgcggttcggtttggtttgcggtttgcatctcagaaaccgaaccaaaccaaaccaaaccgtaagaata |
42785190 |
T |
|
Q |
276 |
a |
276 |
Q |
|
|
| |
|
|
T |
42785191 |
a |
42785191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 18357589 - 18357514
Alignment:
Q |
376 |
ctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||| |
|
|
T |
18357589 |
ctttccatcttcttcaattcatttccagtgatgaatttgtttcattttcttcccaataatttgtttcatgcttatg |
18357514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 44086025 - 44085956
Alignment:
Q |
201 |
tgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaa |
270 |
Q |
|
|
||||||||| |||| |||| | |||| ||||| ||| ||| |||| |||||||||||| ||||||||||| |
|
|
T |
44086025 |
tgaaccgcatggtttggtttggtttgtggttttcatttcaccaaccgaaccaaaccaaaccaaaccgcaa |
44085956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 183; Significance: 8e-99; HSPs: 30)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 12680646 - 12680914
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| ||||| |||| | ||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
T |
12680646 |
ggatgacttttgcaatgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaatgatgaatatta |
12680745 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||| || || |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |
|
|
T |
12680746 |
cttaaacatgtactagcccaattacataacttaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca |
12680845 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
12680846 |
tctctttcaattcatttcaagtgatgaatttgtttcctttacttttcaataatttgtttcatgcttatg |
12680914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 186 - 445
Target Start/End: Original strand, 2226454 - 2226716
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || | |||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| |
|
|
T |
2226454 |
ggatgacttttgcacttaaccgcgcggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgccagaataatgaatatta |
2226553 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| ||||| |||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |
|
|
T |
2226554 |
cttaaacatgtattagcccaattacatagctcatgaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca |
2226653 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |
|
|
T |
2226654 |
tctctttcaattcatttcctgtgatgaatatgtttcctttacttcccaataatttgtttcatg |
2226716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 186 - 442
Target Start/End: Original strand, 12165514 - 12165773
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
T |
12165514 |
ggatgacttttgcactgaaccgcatggttcggttcggtttgcagtttgcatctcagcaactgaaccaaacgaaaccaaaccgcaagaataatgaatatta |
12165613 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||||||||||||||||||||| ||||| || ||| |||||||| |||||||||| ||| |||||||||| || |
|
|
T |
12165614 |
cttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatctttccattgttgcaccatcaggttcaattttaattccttttca |
12165713 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc |
442 |
Q |
|
|
|||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
12165714 |
tctctttcgatttatttccagtgatgaatttgtttcctttacttgtcaataatttgtttc |
12165773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 187 - 451
Target Start/End: Original strand, 36103183 - 36103450
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || |||||||| ||||||| || | |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
36103183 |
gatgacttttgcactgaaccgcgcggttcgttttggtttgtagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattac |
36103282 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat |
383 |
Q |
|
|
|| || |||||||||| ||| |||||||||||||||||||| ||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||| |
|
|
T |
36103283 |
ttgaacatgtactagcccaactacatagctcaagaataatcgtttttgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccat |
36103382 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| |||| |
|
|
T |
36103383 |
ctctttcaattcatttacagtgatgaatttgtttcatttactttccaataatttgtttgatgcttatg |
36103450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 9161491 - 9161226
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || ||||||| |||||||||||| ||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||| |
|
|
T |
9161491 |
gatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgaatctcagcaaccgaaccaaaccaaacccaaccgcaagaataatgaatattac |
9161392 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat |
383 |
Q |
|
|
||||||||| |||||| ||| |||||||||| |||||||||||||||||| |||||| |||||||| ||||| |||| |||||||||||||||||| |
|
|
T |
9161391 |
ttaaatatgcactagcccaa--acatagctcagaaataatctcttttgattcgatttttccattgttgcaccatcaagttcaattctaattcctttccat |
9161294 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| |
|
|
T |
9161293 |
ctctttgaattcatttccagtgatgaatttatttcctttacttcccaataatttgtttcatgcttatg |
9161226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 32520796 - 32521059
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| |||||||||| | |||||| | |||||||||||||| |||||||||||| ||||||||||| |||||||||| |
|
|
T |
32520796 |
ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcgatctgcatctcagcaaccgaaccaaaccaa-----accgcaagaatgatgaatatta |
32520890 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||| |
|
|
T |
32520891 |
cttaaagatgtactagcccaattacataatttaagaataatctcttttgattcgattttttcattgttgcaccatcaggttcgattctagttcatttcca |
32520990 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||| |
|
|
T |
32520991 |
tctctttcaattcatttcaagtgatgaatttgtttcttttacttcccaataatttgtttcatgcttatg |
32521059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 176 - 451
Target Start/End: Original strand, 332842 - 333122
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || ||| ||||||| || |||||||| | |||||||| | ||||||||||||||||||||| | |||||||||||| | |||||||||||||| |
|
|
T |
332842 |
cacttggttcggacgacttttgcactgaaccgcgcagttcggtttggtttgcggtttgcatctcagcatccgaaccaaaccaaactaaaccgcaagaata |
332941 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattac--atagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattct |
370 |
Q |
|
|
|||||||||||||||| ||||||| || ||||||| |||||||||||||||||| ||||||||| |||||| ||| ||| ||||| |||||||||| |
|
|
T |
332942 |
atgaatattacttaaacatgtactggcccaattacatatagctcaagaataatctattttgattcgatttttccataattgcaccatcaagttcgattct |
333041 |
T |
|
Q |
371 |
aattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| |||| |
|
|
T |
333042 |
aattcctttctatctctttcaattcatttcccgtgatgaatttatttcttttacttcccaataatttgtttcatgcttatg |
333122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 215 - 446
Target Start/End: Original strand, 30265393 - 30265626
Alignment:
Q |
215 |
cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatag |
314 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||| |
|
|
T |
30265393 |
cggttcggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaatcgcaagaataatgaatattacttaatcatgtgctagcccaattacatag |
30265492 |
T |
|
Q |
315 |
ctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaat |
411 |
Q |
|
|
||||| ||||| | |||| |||| |||||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
30265493 |
ctcaaaaataa-cgctttcaattcgatttttccattgttgcaccatcaagttcgattctaattattttccatctctttcaattcatttccagtgatgaat |
30265591 |
T |
|
Q |
412 |
ttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |
|
|
T |
30265592 |
ttgtttcctttacttcccaataatttgtttcatgc |
30265626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 182 - 443
Target Start/End: Complemental strand, 38434201 - 38433937
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||| |
|
|
T |
38434201 |
atttggatgacttttgcactgaaccgtgaggttcggtttgatttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataagaaat |
38434102 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt |
378 |
Q |
|
|
|||||||||| ||||||||| |||||||||||| |||||||||||||||| |||| |||||| |||||||| ||||| ||||||||||||||| || |
|
|
T |
38434101 |
attacttaaacttgtactagcccaattacatagcctaagaataatctcttttaattcgatttttccattgttgcaccatcacgttcgattctaattcttt |
38434002 |
T |
|
Q |
379 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca |
443 |
Q |
|
|
| |||||| || |||||||||||| |||||||||| ||| |||| ||| |||||||||||||||| |
|
|
T |
38434001 |
ttcatctcctttaattcatttccaatgatgaatttattttcttttcttcccaataatttgtttca |
38433937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 10174566 - 10174322
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| |
|
|
T |
10174566 |
ggatgacttttgcactgaaccgcgcggtttg-ttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaa----aatgaatatta |
10174472 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||| | |||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||| || |
|
|
T |
10174471 |
cttaaacatgtactatcccaattacataactcaag---aatctcttttgattcgattttttcattgttgcaccatcaggttcgattataattcattttca |
10174375 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
10174374 |
tctctttca----------agtgatgaatttgtttcctttactttctaataatttgtttcatg |
10174322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 446
Target Start/End: Original strand, 36176691 - 36176934
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || | ||||||| ||||||| | | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||| |
|
|
T |
36176691 |
ggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccgcaagaataatgactatta |
36176790 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatcaggttcgattctaattcctttccatct |
385 |
Q |
|
|
|||||| ||||||||| ||||||||||||||||||| |||| || ||| || |||||||||| |||||||||||||||||||| |
|
|
T |
36176791 |
cttaaacgtgtactagcccaattacatagctcaagaaaaatcactgttg---ca--------------ccatcaggttcaattctaattcctttccatct |
36176873 |
T |
|
Q |
386 |
ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
36176874 |
ctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc |
36176934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 279 - 442
Target Start/End: Complemental strand, 35893405 - 35893238
Alignment:
Q |
279 |
aatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattc |
375 |
Q |
|
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| | ||||||||||||| |
|
|
T |
35893405 |
aatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgatttgattttttcattgttgcaccatcacgctcgattctaattc |
35893306 |
T |
|
Q |
376 |
cttt-ccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc |
442 |
Q |
|
|
|||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
35893305 |
cttttccatctttttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttc |
35893238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 267 - 446
Target Start/End: Complemental strand, 42545086 - 42544902
Alignment:
Q |
267 |
gcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggtt |
363 |
Q |
|
|
||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||||||| || |||||||||| ||| ||| | |
|
|
T |
42545086 |
gcaagaataatgaatattacttaaatatgtaatagcccaataacatagctcaagaataatctaatttgattcaacttgttcattgttgcaccataaggct |
42544987 |
T |
|
Q |
364 |
cgattctaattcctttccatctctttca--attcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
T |
42544986 |
tgattttaattcttttccatctctttcaatattcatttccagtgatgaatttgtttcctttacttctcaataatttatttcatgc |
42544902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 451
Target Start/End: Complemental strand, 23781182 - 23780977
Alignment:
Q |
227 |
cggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataat |
326 |
Q |
|
|
||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| | ||||||| ||||||||||||||| |
|
|
T |
23781182 |
cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatattcc-----------------caattacttagctcaagaataat |
23781100 |
T |
|
Q |
327 |
ctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttccttta |
423 |
Q |
|
|
||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
23781099 |
ctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatttcc-----tgaatttgtttccttta |
23781005 |
T |
|
Q |
424 |
ctttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||| ||||||||||||||||||| |||| |
|
|
T |
23781004 |
cttcccaataatttgtttcatgcttatg |
23780977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 451
Target Start/End: Complemental strand, 23868135 - 23867930
Alignment:
Q |
227 |
cggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataat |
326 |
Q |
|
|
||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| | ||||||| ||||||||||||||| |
|
|
T |
23868135 |
cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatattcc-----------------caattacttagctcaagaataat |
23868053 |
T |
|
Q |
327 |
ctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttccttta |
423 |
Q |
|
|
||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
23868052 |
ctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatttcc-----tgaatttgtttccttta |
23867958 |
T |
|
Q |
424 |
ctttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||| ||||||||||||||||||| |||| |
|
|
T |
23867957 |
cttcccaataatttgtttcatgcttatg |
23867930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 186 - 338
Target Start/End: Original strand, 36176460 - 36176612
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || | ||||||| ||||||| | | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||| |
|
|
T |
36176460 |
ggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccgcaagaataatgactatta |
36176559 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattc |
338 |
Q |
|
|
|||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
T |
36176560 |
cttaaacgtgtactagcccaattacatagctcaagaaaaatctcttttgattc |
36176612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 9988586 - 9988722
Alignment:
Q |
312 |
tagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatg |
408 |
Q |
|
|
|||| |||||| ||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||| |||||| ||||||||||||| ||||||| |
|
|
T |
9988586 |
tagcccaagaacaatctcttttgattcaattttttcattcttgcaccatcagattcgattttaattccttttcatctccttcaattcatttctagtgatg |
9988685 |
T |
|
Q |
409 |
aatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
|||||||||||||| ||||| |||||||||||||||| |
|
|
T |
9988686 |
aatttgtttccttttctttcaaataatttgtttcatg |
9988722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 355 - 451
Target Start/End: Original strand, 38334707 - 38334803
Alignment:
Q |
355 |
catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||| ||||||||||| ||||||| |||| |
|
|
T |
38334707 |
catcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcattttcttcccaataatttgattcatgcttatg |
38334803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 701658 - 701566
Alignment:
Q |
183 |
tttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
||||||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
701658 |
tttggatgacttttagactaaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
701566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 443
Target Start/End: Original strand, 17084520 - 17084706
Alignment:
Q |
260 |
ccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---ca |
356 |
Q |
|
|
|||||||||||||||||| ||||||||||||| ||||||| | |||||||||| ||| |||||||| ||||||||| |||||| |||| ||| || |
|
|
T |
17084520 |
ccaaaccgcaagaataatcaatattacttaaacttgtactaacccaattacataatccaaaaataatctattttgattcgatttttccattattgcacca |
17084619 |
T |
|
Q |
357 |
tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca |
443 |
Q |
|
|
||| |||||| |||| || ||| |||||| |||||| |||| |||||||||||||||||||||| || |||||||||| ||||| |
|
|
T |
17084620 |
tcaagttcgaatctatttgtttttcatctccttcaatcaattttcagtgatgaatttgtttccttttctccccaataatttatttca |
17084706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 666903 - 666992
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
666903 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
666992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 27885718 - 27885807
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
27885718 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
27885807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 8409424 - 8409335
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||| ||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
8409424 |
ggatgacttttagactgaatcgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
8409335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 11917893 - 11917804
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | | |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
11917893 |
ggatgacttttagactaaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
11917804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 38334386 - 38334475
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||| |||| |
|
|
T |
38334386 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaactaaaccaaaccgcaaaaata |
38334475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 15068914 - 15068825
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||||||| |||| |
|
|
T |
15068914 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaaccgcaaaaata |
15068825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 30002436 - 30002347
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| ||||| | |||||||| |||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
30002436 |
ggatgatttttagactgaaccgcgcggttcggttcggtttgcggtttacatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
30002347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 42545892 - 42545822
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaacca |
257 |
Q |
|
|
|||||||||| || | |||||| |||||||||||| |||||||||||||||||| |||| ||||||||||| |
|
|
T |
42545892 |
gatgacttttgcactaaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccgaaccaaacca |
42545822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 451
Target Start/End: Complemental strand, 35893247 - 35893205
Alignment:
Q |
409 |
aatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
35893247 |
aatttgtttcctttacttcccaataatttgtttcatgcttatg |
35893205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 691159 - 691226
Alignment:
Q |
203 |
aaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaa |
270 |
Q |
|
|
||||||| |||| |||| |||||||||||| ||| | | |||| |||||||||||| ||||||||||| |
|
|
T |
691159 |
aaccgcatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaa |
691226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 186 - 446
Target Start/End: Original strand, 6003964 - 6004227
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| ||| |
|
|
T |
6003964 |
ggatgacttttgcactgaaccgcgaggtttggttcggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta |
6004063 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||| |
|
|
T |
6004064 |
cttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcaattctaattcctttcca |
6004163 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
6004164 |
tctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgc |
6004227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 189 - 446
Target Start/End: Original strand, 35531736 - 35531991
Alignment:
Q |
189 |
tgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactt |
288 |
Q |
|
|
|||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
T |
35531736 |
tgacttttgcactgaaccgcacggttcagttcgatttgcagtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatattactt |
35531830 |
T |
|
Q |
289 |
aaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatct |
385 |
Q |
|
|
||| |||||||||| ||||| |||||||||||||||||| |||| |||| |||||| |||||||| ||||| ||||||||||||||||||||||||| |
|
|
T |
35531831 |
aaacatgtactagcccaattgcatagctcaagaataatcgttttttattcgatttttccattgttgcaccatcatgttcgattctaattcctttccatct |
35531930 |
T |
|
Q |
386 |
ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||||| |
|
|
T |
35531931 |
ctttcaattcatttccgtttatgaatgtgtttcctttacttcccaataatttgtttcatgc |
35531991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 182 - 451
Target Start/End: Original strand, 21586419 - 21586685
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||||||||||||| || | |||||| |||||||||| ||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||| |
|
|
T |
21586419 |
atttggatgacttttgcactaaaccgcgcggttcggtt-----tgcagtttgcatctcagcaaccgaaccaaaccaa-ccaaatcgcaagaataatgaat |
21586512 |
T |
|
Q |
282 |
attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctt |
378 |
Q |
|
|
|||||||||| |||||||||| |||||||||| ||||||||||| ||||| ||||| |||||| |||||||||| || ||||||||||||||||||| |
|
|
T |
21586513 |
attacttaaacatgtactagccaaattacatagttcaagaataatatctttcgattcgatttttccattgttgcaccatgaggttcgattctaattcctt |
21586612 |
T |
|
Q |
379 |
tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||| |||| |
|
|
T |
21586613 |
tccatctctttcaattcatttccggtgatgaatttgtttcctttatttctcagtaatttgtttcatgcttatg |
21586685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 176 - 451
Target Start/End: Original strand, 50562152 - 50562420
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || |||||||||||||| |||| || || |||||||||||||||| ||||||||||| |||| ||||||||| |||||||| |
|
|
T |
50562152 |
cacttggttcggatgacttttacactgaatcgtgcgattcggttcgatttgcgatttgcatctcaacaacaaaaccaaaccc----------caagaata |
50562241 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa |
372 |
Q |
|
|
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||| |
|
|
T |
50562242 |
atgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttccattgttgcaccatcaggttcgattctaa |
50562341 |
T |
|
Q |
373 |
ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||||| |||| |
|
|
T |
50562342 |
ttcctttccatctctttcaatttattttcagtgatgaatttgtttcatttacttccaaataatttgtttcatgcttatg |
50562420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 247 - 451
Target Start/End: Complemental strand, 33002968 - 33002761
Alignment:
Q |
247 |
gaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaatttttt |
346 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||| |
|
|
T |
33002968 |
gaaccaaactaaaccaaaccgcaagaataatgaatatttcttaaatatgtaccagtccaattacatagctcaataataatctcttttgattcgatttttc |
33002869 |
T |
|
Q |
347 |
cattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca |
443 |
Q |
|
|
|||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||| | |||||||||||||||| ||||||||||||||||| |
|
|
T |
33002868 |
cattgttgcaccatcaggttcgattctaactcctttccatctctttcaatttatttcctgtgaagtatttgtttcctttactctccaataatttgtttca |
33002769 |
T |
|
Q |
444 |
tgcctatg |
451 |
Q |
|
|
||| |||| |
|
|
T |
33002768 |
tgcttatg |
33002761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 176 - 444
Target Start/End: Complemental strand, 32880823 - 32880547
Alignment:
Q |
176 |
cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||| || ||||||||||| || |||||||| | |||||||| | ||| ||||||||||||||||||| |||||||||||| |||||||||| | |
|
|
T |
32880823 |
cacttggttcggatgacttttgcactgaaccgcgcagttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaaaa |
32880729 |
T |
|
Q |
276 |
atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa |
372 |
Q |
|
|
|||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||| |||||| |||||||| ||||||||| |||||||| |
|
|
T |
32880728 |
atgaatattacttaaacatgtactagtccaattacatagctcaagtttaatctctttcgatttgatttttccattgttgcaccatcaggtttgattctaa |
32880629 |
T |
|
Q |
373 |
ttcctttccatctctttca----------attcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat |
444 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
32880628 |
ttcctttccatctctttcaattcatttccattcatttccagtgatgaatttgtttcctttacttcccaataatttctttcat |
32880547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 263 - 446
Target Start/End: Complemental strand, 39098373 - 39098187
Alignment:
Q |
263 |
aaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catca |
359 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||| |||||| || ||||||||||||||| ||||| |
|
|
T |
39098373 |
aaccgcaagaataatgaatattacttaaacatgtactaacacaattaaatagctcaagaataatcttttttgaatcgattttttcattgttgcaccatca |
39098274 |
T |
|
Q |
360 |
ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc |
446 |
Q |
|
|
|| | |||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||| |||| |
|
|
T |
39098273 |
ggattgattctaatttctttccatctctttcaattcatttcgagtgacaaacttgtttcctttacttcccaataatttgtttgatgc |
39098187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 215 - 451
Target Start/End: Complemental strand, 43030895 - 43030671
Alignment:
Q |
215 |
cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaa-ccgcaagaataatgaatattacttaaatatgtactagctcaattacata |
313 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||||| ||||||||| |
|
|
T |
43030895 |
cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaaccgcaagaataatgaata---------------ctagccaaattacata |
43030811 |
T |
|
Q |
314 |
gctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaa |
410 |
Q |
|
|
||||||||||||||| ||| ||||| |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
43030810 |
gctcaagaataatctttttcgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccatctctttcaattcatctccagtgatgaa |
43030711 |
T |
|
Q |
411 |
tttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||| ||||||||| || ||||||||||||||||||| |||| |
|
|
T |
43030710 |
ttt-tttcctttatttcccaataatttgtttcatgcttatg |
43030671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 48032712 - 48032836
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||| |||||||||| |
|
|
T |
48032712 |
ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaaccgcaagaatcatgaatatta |
48032811 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattac |
310 |
Q |
|
|
|||||| |||||||||| ||||||| |
|
|
T |
48032812 |
cttaaacatgtactagcccaattac |
48032836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 317 - 451
Target Start/End: Original strand, 27641870 - 27642007
Alignment:
Q |
317 |
caagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaattt |
413 |
Q |
|
|
|||||||||||||||||||||| |||||| |||||| ||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
T |
27641870 |
caagaataatctcttttgattcgatttttccattgtagcaccatcaggttcgaatctaattcctctccatctctttcaattcattttcagtgatgaattt |
27641969 |
T |
|
Q |
414 |
gtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||| ||| ||||||||||||||||||| |||| |
|
|
T |
27641970 |
atttccttttcttcccaataatttgtttcatgcttatg |
27642007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 10369699 - 10369610
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
10369699 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
10369610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34795021 - 34794923
Alignment:
Q |
177 |
acttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
||||| || |||||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
34795021 |
acttggttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
34794923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 35401805 - 35401894
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
35401805 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata |
35401894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 51149303 - 51149392
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||| |||| |
|
|
T |
51149303 |
ggatgacttttagactgaaccgcgcggttcggttcggtttacggtttgcatctcagcaacctaaccaaaccaaaccaaaccgcaaaaata |
51149392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 4669228 - 4669317
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||| | ||||||||| |||| |
|
|
T |
4669228 |
ggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaaccgcaaaaata |
4669317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 33361401 - 33361312
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||||| | |||||||| ||||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| |||| |
|
|
T |
33361401 |
ggatgacttttagactgaaccgcgcggtttagttcagtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaaaaata |
33361312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 27641794 - 27641865
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa |
258 |
Q |
|
|
|||||||||| || |||||||| |||| | || | |||||||||||||||||||| ||| ||||||||||| |
|
|
T |
27641794 |
gatgacttttgcactgaaccgcgtggtttgatttggtttgcggtttgcatctcagccactaaaccaaaccaa |
27641865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 173; Significance: 7e-93; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 188 - 451
Target Start/End: Original strand, 36827365 - 36827631
Alignment:
Q |
188 |
atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact |
287 |
Q |
|
|
||||||||| || |||||| ||||||| |||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
36827365 |
atgacttttgcactgaaccacacggtttggttcggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaaccgcaagaataatgaatattact |
36827464 |
T |
|
Q |
288 |
taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc |
384 |
Q |
|
|
|||| |||||||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||||||| |
|
|
T |
36827465 |
taaacatgtactagcccaattacatagctcaagattaatctctttcgattcaatttttccattgttgcaccatcaggttcgattctaatttctttccatc |
36827564 |
T |
|
Q |
385 |
tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| |
|
|
T |
36827565 |
tctttcaatttatttccaccgatgaatttgtttcttttacttcccaataatttgtttcatgcttatg |
36827631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 30392591 - 30392324
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| | |||||||| ||||| ||||| ||||||||||| |||||| |||| |||||||||||| |||||||||||||||||||||||||| |
|
|
T |
30392591 |
ggatgacttttttactgaaccgcgcggtttggttcagtttgcggtttgtatctcaacaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta |
30392492 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| |||||||||||| ||| |||||||||||||||||| |||||| ||||| ||| || ||||| |||||||||||||||||| |
|
|
T |
30392491 |
cttaaacatgtactagcccaattacatagcccaacaataatctcttttgattcgatttttccattgctgcactatgaggtttgattctaattcctttcca |
30392392 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |
|
|
T |
30392391 |
tctcttttaattcatttccagtgatgaatttgtttccttttc-ttccaataatttgtttcatgcttatg |
30392324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 186 - 444
Target Start/End: Complemental strand, 14549735 - 14549478
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||||| |
|
|
T |
14549735 |
ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcatccgaaccaaaccaa-----accgtaagaataatgaatatta |
14549641 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||| |||||||||| |
|
|
T |
14549640 |
cttaaacatgtactagcccaattacatagctcaagaataatctcttttgattcgaattttccattgttgtaccatcaggttcgattctatttcctttcca |
14549541 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttcc-aataatttgtttcat |
444 |
Q |
|
|
|||||||||||| |||| |||||||||||||||||||||||||| || ||||| ||||||||| |
|
|
T |
14549540 |
tctctttcaattaattttcagtgatgaatttgtttcctttacttcccaaataaattgtttcat |
14549478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 187 - 451
Target Start/End: Complemental strand, 10661658 - 10661392
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac |
286 |
Q |
|
|
|||||||||| || |||||| | ||||| |||| | |||||| |||||||||||||||| ||| ||||||| |||||||||||| ||||||||||| | |
|
|
T |
10661658 |
gatgacttttgcactgaaccacgcggtttggtttggtttgcg-tttgcatctcagcaaccaaactaaaccaaaccaaaccgcaaggataatgaatatatc |
10661560 |
T |
|
Q |
287 |
ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat |
383 |
Q |
|
|
||||| |||||||||| | |||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| ||||||||||||||| |||||| |
|
|
T |
10661559 |
ttaaacatgtactagcccgattacatagctcaagaattatcttttttgattcgattttttcattgttgtaccatcatgttcgattctaattcatttccaa |
10661460 |
T |
|
Q |
384 |
ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
T |
10661459 |
ctctttcaattcatttccagtgaagaatttgtttcctttacttcccaataatttgtttcatgcttatg |
10661392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 180 - 451
Target Start/End: Original strand, 18169596 - 18169865
Alignment:
Q |
180 |
tgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatga |
279 |
Q |
|
|
||||| |||| |||||| || |||||||| ||||||||| | ||||||||||||||||| ||| | |||||||| ||| || ||||||||||||| |
|
|
T |
18169596 |
tgattcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaa-----actgcaagaataatga |
18169690 |
T |
|
Q |
280 |
atattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcc |
376 |
Q |
|
|
|||||||||||| |||||||||| |||||||||| |||||||||||||||| | ||||| |||||| |||| ||||| ||||||| |||||||||||| |
|
|
T |
18169691 |
atattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttgattctaattcc |
18169790 |
T |
|
Q |
377 |
tttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |
|
|
T |
18169791 |
tttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatg |
18169865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 180 - 451
Target Start/End: Original strand, 18633162 - 18633431
Alignment:
Q |
180 |
tgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatga |
279 |
Q |
|
|
||||| |||| |||||| || |||||||| ||||||||| | ||||||||||||||||| ||| | |||||||| ||| || ||||||||||||| |
|
|
T |
18633162 |
tgattcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaa-----actgcaagaataatga |
18633256 |
T |
|
Q |
280 |
atattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcc |
376 |
Q |
|
|
|||||||||||| |||||||||| |||||||||| |||||||||||||||| | ||||| |||||| |||| ||||| ||||||| |||||||||||| |
|
|
T |
18633257 |
atattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttgattctaattcc |
18633356 |
T |
|
Q |
377 |
tttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |
|
|
T |
18633357 |
tttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatg |
18633431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 215 - 443
Target Start/End: Complemental strand, 33069075 - 33068844
Alignment:
Q |
215 |
cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatag |
314 |
Q |
|
|
||||| |||||||||||||||||| |||||| ||||||||| || ||||||| ||| |||||| |||||||||||||| ||||| ||| |||||||||| |
|
|
T |
33069075 |
cggtttgatttgcggtttgcatcttagcaaccgaaccaaacgaaaccaaaccacaaaaataatcaatattacttaaatttgtaccagcccaattacataa |
33068976 |
T |
|
Q |
315 |
ctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaat |
411 |
Q |
|
|
||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||| ||| || |||||||||||| ||||||||||| |
|
|
T |
33068975 |
ctcaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattctaattccttttcatttccttcaattcattttcagtgatgaat |
33068876 |
T |
|
Q |
412 |
ttgtttcctttactttccaataatttgtttca |
443 |
Q |
|
|
|| |||||||| ||| |||||||||||||||| |
|
|
T |
33068875 |
ttatttccttttcttcccaataatttgtttca |
33068844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 186 - 445
Target Start/End: Complemental strand, 3682425 - 3682169
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| ||||| |||| | ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
3682425 |
ggatgacttttccactgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta |
3682331 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgtt---gcatcaggttcgattctaattcctttcca |
382 |
Q |
|
|
| |||| |||||||||| |||||||||| | |||||||||||||||||||||||||||| |||| || |||||||||| ||||||||| ||| ||| |
|
|
T |
3682330 |
cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcaatttttccatttttccaccatcaggttcaattctaatttcttacca |
3682231 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||| |||||||||| ||||| ||| ||||||||||| ||| ||| ||||||| |||||||||| |
|
|
T |
3682230 |
tctatttcaattca-ttccactgacgaatttgtttcattttcttcccaataacttgtttcatg |
3682169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 190 - 445
Target Start/End: Original strand, 36909923 - 36910165
Alignment:
Q |
190 |
gacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactta |
289 |
Q |
|
|
||||||| || ||||| || |||||||||||| ||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||| |
|
|
T |
36909923 |
gacttttgcattgaactgcgcggttcggttcggtttgcggtttgcatctcaggaaccgaaccataccaa-----accgcaagaataatgaatat------ |
36910011 |
T |
|
Q |
290 |
aatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctc |
386 |
Q |
|
|
|||||||||| ||||||||| ||||||||||||||| ||||||||| |||||| |||||||||| ||||||| ||||||||||| |||||||||| |
|
|
T |
36910012 |
---atgtactagcccaattacat-gctcaagaataatct-ttttgattccatttttccattgttgcaccatcaggtttgattctaattcatttccatctc |
36910106 |
T |
|
Q |
387 |
tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg |
445 |
Q |
|
|
||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||| |
|
|
T |
36910107 |
tttcaattcattttcggtgatgaatttatttcctttacttcccaataatttgtttcatg |
36910165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 186 - 350
Target Start/End: Complemental strand, 44673236 - 44673068
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |
|
|
T |
44673236 |
ggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaactgcaagaataatgaatatta |
44673137 |
T |
|
Q |
286 |
cttaaatatgtactagctcaat----tacatagctcaagaataatctcttttgattcaattttttcatt |
350 |
Q |
|
|
|||||| |||||||||| |||| |||||||||||| |||||| ||||||||| |||||||||||| |
|
|
T |
44673136 |
cttaaacatgtactagcccaattacatacatagctcaataataattgcttttgatttaattttttcatt |
44673068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 186 - 357
Target Start/End: Original strand, 6200507 - 6200678
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||| || ||||| ||||| ||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
T |
6200507 |
ggatgacttttgcactgaatcgtgcggtttcgttcggtttttggtttgcatcttagcaaccaaaccaaaccaaaccaaaccgcaagaataatgaatatta |
6200606 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcat |
357 |
Q |
|
|
|| ||| |||||||||| |||||||||| | |||||||||||||||||||||| |||||| ||||||||||| |
|
|
T |
6200607 |
ctgaaacatgtactagcccaattacataacccaagaataatctcttttgattcgatttttccattgttgcat |
6200678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 5802528 - 5802599
Alignment:
Q |
187 |
gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa |
258 |
Q |
|
|
||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
T |
5802528 |
gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccaaaccaaaccaa |
5802599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 3006232 - 3006283
Alignment:
Q |
215 |
cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaacc |
266 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
T |
3006232 |
cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaacc |
3006283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 42496467 - 42496565
Alignment:
Q |
182 |
atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat |
281 |
Q |
|
|
||||| |||| |||| || |||||||||||||||||||||||||| | ||| |||| | ||| |||||||| ||||||||||||||||||||| |
|
|
T |
42496467 |
atttgaatgatttttgcactgaaccgcacggttcggttcgatttgtgatttatatcttaacaatcgaaccaaa-----tcaaaccgcaagaataatgaat |
42496561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 44673073 - 44673023
Alignment:
Q |
393 |
ttcatttccagtgatgaatttgtttcctttactttccaataatttgtttca |
443 |
Q |
|
|
||||||| ||||||||||||||||| |||||||| | | |||||||||||| |
|
|
T |
44673073 |
ttcattttcagtgatgaatttgttttctttacttccaagtaatttgtttca |
44673023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 167; Significance: 3e-89; HSPs: 2)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 69106 - 69374
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| |
|
|
T |
69106 |
ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgcaagaataatgaatatta |
69205 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||| ||| |||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
T |
69206 |
cttaaacatgtactagcctaattacatagcccaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca |
69305 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||| |||| |
|
|
T |
69306 |
tctctttcaattcatttccagtgataaatttgtttcattttcttcccaataatttgtttcatgcttatg |
69374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 186 - 356
Target Start/End: Original strand, 77212 - 77382
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| |
|
|
T |
77212 |
ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgcaagaataatgaatatta |
77311 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca |
356 |
Q |
|
|
|||||| |||||||||| ||||||||||| ||| ||||||| |||||||||| |||||| |||||||||| |
|
|
T |
77312 |
cttaaacatgtactagcctaattacatagcccaataataatcacttttgattcgatttttccattgttgca |
77382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 186 - 451
Target Start/End: Complemental strand, 106547 - 106278
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| ||||||||||| |||||||||| | |||||||||||||||||| |||| |||||||||| | |||| ||||||||||||||||||||| |
|
|
T |
106547 |
ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcaacaaccgaaccaaacccaaccaacccgcaagaataatgaatatta |
106448 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| |||||||||| ||||||||||| || |||||| |||||| |||| |||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
T |
106447 |
cttaaacatgtactagcctaattacatagcctaataataatttctttttattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca |
106348 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttc-ctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
||||||||||||||||||||||||| |||||||||| ||| ||| | ||||||||||||||||| |||| |
|
|
T |
106347 |
tctctttcaattcatttccagtgataaatttgtttcatttttcttccgaataatttgtttcatgcttatg |
106278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 248 - 451
Target Start/End: Complemental strand, 129092 - 128885
Alignment:
Q |
248 |
aaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttc |
347 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||| |||| |||||| | |
|
|
T |
129092 |
aaccaaaccaaaccaacccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctctttatattcgatttttcc |
128993 |
T |
|
Q |
348 |
attgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttc-ctttactttccaataatttgtttca |
443 |
Q |
|
|
||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||| |||||||||||||||| |
|
|
T |
128992 |
attgttgcaccatcaaattcgattctaattcctttccatctctttcaattcattttcagtgataaatttgtttcatttttcttcccaataatttgtttca |
128893 |
T |
|
Q |
444 |
tgcctatg |
451 |
Q |
|
|
||| |||| |
|
|
T |
128892 |
tgcttatg |
128885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 40145 - 40413
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || |||||||| || |||||| | |||| ||||| ||||||| |||| |||||||||||| ||||||| |||||||||||||||||| |
|
|
T |
40145 |
ggatgacttttgcactgaaccgcgtggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaaccacaagaataatgaatatta |
40244 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| || ||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||| ||||||||| |||||| |
|
|
T |
40245 |
cttaaacatctactagcccaattacatagctcaagaataatttcttttgattcaatttgtccattgttgcaacatcaggttccattctaatttatttcca |
40344 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg |
451 |
Q |
|
|
|||||||||||||||||| |||||||||||| ||| |||||||| || ||||||||||| |||| |||| |
|
|
T |
40345 |
tctctttcaattcatttcaagtgatgaatttatttactttacttccccataatttgtttaatgcttatg |
40413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 186 - 423
Target Start/End: Original strand, 47341 - 47581
Alignment:
Q |
186 |
ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta |
285 |
Q |
|
|
||||||||||| || ||||||||| || |||||| | |||| ||||| ||||||| |||| |||||||||||| ||||||| |||||||||||||||||| |
|
|
T |
47341 |
ggatgacttttgcactgaaccgcatggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaaccacaagaataatgaatatta |
47440 |
T |
|
Q |
286 |
cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca |
382 |
Q |
|
|
|||||| || ||||||| ||||||||||||||||||||||| ||||||||||| |||| | |||||||| |||||||||| ||||||||| |||||| |
|
|
T |
47441 |
cttaaacatctactagcccaattacatagctcaagaataatttcttttgattcgatttgtccattgttgcaacatcaggttccattctaatttatttcca |
47540 |
T |
|
Q |
383 |
tctctttcaattcatttccagtgatgaatttgtttccttta |
423 |
Q |
|
|
|||||||||||||||||| |||||||||||||||| ||||| |
|
|
T |
47541 |
tctctttcaattcatttcaagtgatgaatttgtttacttta |
47581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 5490 - 5577
Alignment:
Q |
188 |
atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata |
275 |
Q |
|
|
|||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
|
|
T |
5490 |
atgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata |
5577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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