View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1503-Insertion-18 (Length: 161)
Name: NF1503-Insertion-18
Description: NF1503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1503-Insertion-18 |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 8e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 8e-75
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 31077260 - 31077401
Alignment:
| Q |
8 |
aatatttcatcatgttttagtaaaacttgtttgttcttatttaacagcagtttccatcctttgcaaaagaaactctcattgtccaaaatatatgtgctcc |
107 |
Q |
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| T |
31077260 |
aatatttcatcatgttttagtaaaacttgtttgttcttatttaacagcagtttccatcctttgcaaaagaaactctcattgtccaaaatatatgtgctcc |
31077359 |
T |
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| Q |
108 |
cctcctttacaccaagagtgcattaggaatatgtgcatgtgt |
149 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
31077360 |
cctcctttacaccaagagtgcattaggaatatgtgcatgtgt |
31077401 |
T |
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