View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1503_high_10 (Length: 416)

Name: NF1503_high_10
Description: NF1503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1503_high_10
NF1503_high_10
[»] chr5 (38 HSPs)
chr5 (201-331)||(14553268-14553398)
chr5 (1-202)||(22533385-22533587)
chr5 (1-196)||(7015509-7015706)
chr5 (1-162)||(13064596-13064757)
chr5 (5-162)||(41339390-41339547)
chr5 (1-196)||(25253273-25253469)
chr5 (1-196)||(25317064-25317260)
chr5 (1-172)||(33735339-33735510)
chr5 (1-196)||(32052225-32052421)
chr5 (1-162)||(12990975-12991136)
chr5 (1-172)||(18013799-18013969)
chr5 (1-159)||(27753517-27753676)
chr5 (6-162)||(6421658-6421814)
chr5 (5-161)||(8323247-8323403)
chr5 (18-162)||(20704917-20705060)
chr5 (1-70)||(34404671-34404740)
chr5 (85-196)||(33735584-33735696)
chr5 (85-196)||(37944995-37945107)
chr5 (18-159)||(37945198-37945339)
chr5 (318-377)||(14553420-14553479)
chr5 (88-194)||(18934988-18935094)
chr5 (1-176)||(16117983-16118148)
chr5 (85-196)||(14745449-14745561)
chr5 (85-196)||(32052495-32052607)
chr5 (1-70)||(9915518-9915587)
chr5 (85-172)||(14745584-14745671)
chr5 (85-172)||(25253112-25253199)
chr5 (85-172)||(25316902-25316989)
chr5 (18-196)||(21261068-21261246)
chr5 (85-162)||(6421893-6421970)
chr5 (96-196)||(7015791-7015892)
chr5 (96-196)||(22024152-22024253)
chr5 (131-195)||(41339670-41339735)
chr5 (88-171)||(18013639-18013722)
chr5 (128-173)||(8323081-8323126)
chr5 (1-58)||(18934900-18934957)
chr5 (128-196)||(34404485-34404554)
chr5 (110-162)||(18934749-18934801)
[»] chr1 (57 HSPs)
chr1 (1-201)||(24701266-24701467)
chr1 (1-196)||(5183507-5183703)
chr1 (6-196)||(26953102-26953293)
chr1 (1-196)||(739405-739601)
chr1 (1-196)||(2953465-2953661)
chr1 (5-196)||(48380872-48381066)
chr1 (6-172)||(49002902-49003067)
chr1 (1-196)||(29042942-29043138)
chr1 (1-176)||(1047391-1047566)
chr1 (1-176)||(46849680-46849855)
chr1 (1-196)||(12577011-12577209)
chr1 (1-165)||(30830163-30830328)
chr1 (1-162)||(33347452-33347613)
chr1 (1-172)||(37152564-37152735)
chr1 (85-202)||(739214-739332)
chr1 (9-172)||(25414870-25415033)
chr1 (1-175)||(29980662-29980835)
chr1 (1-70)||(46544859-46544928)
chr1 (1-172)||(6334682-6334853)
chr1 (88-196)||(33030609-33030717)
chr1 (1-196)||(6056563-6056762)
chr1 (4-196)||(34175923-34176117)
chr1 (85-196)||(5926792-5926904)
chr1 (1-69)||(8890338-8890406)
chr1 (85-196)||(49003146-49003258)
chr1 (1-69)||(51933903-51933971)
chr1 (1-172)||(10019399-10019570)
chr1 (4-194)||(35311977-35312170)
chr1 (85-174)||(49989819-49989908)
chr1 (85-196)||(12577283-12577395)
chr1 (85-200)||(37152809-37152925)
chr1 (1-196)||(49989980-49990179)
chr1 (6-172)||(5926545-5926712)
chr1 (96-196)||(48380682-48380783)
chr1 (85-196)||(1040299-1040411)
chr1 (85-196)||(1047205-1047317)
chr1 (85-196)||(2953735-2953847)
chr1 (85-196)||(19755676-19755788)
chr1 (85-196)||(33347687-33347799)
chr1 (85-196)||(46849929-46850041)
chr1 (85-172)||(5183777-5183864)
chr1 (1-172)||(52454782-52454952)
chr1 (111-161)||(52455052-52455102)
chr1 (1-70)||(46364703-46364772)
chr1 (85-196)||(29980909-29981021)
chr1 (87-194)||(29042759-29042866)
chr1 (1-70)||(19755533-19755602)
chr1 (85-196)||(6056377-6056489)
chr1 (90-162)||(37152469-37152541)
chr1 (85-161)||(46364846-46364922)
chr1 (110-196)||(33030335-33030422)
chr1 (87-196)||(8890213-8890322)
chr1 (87-196)||(46364575-46364685)
chr1 (148-195)||(33030475-33030523)
chr1 (131-194)||(35312172-35312236)
chr1 (96-176)||(46545013-46545093)
chr1 (87-193)||(51933775-51933880)
[»] chr8 (50 HSPs)
chr8 (1-196)||(43866898-43867094)
chr8 (8-196)||(23424706-23424895)
chr8 (1-176)||(11478332-11478507)
chr8 (1-172)||(27856929-27857100)
chr8 (1-162)||(41182083-41182244)
chr8 (1-172)||(35163523-35163699)
chr8 (18-196)||(36623353-36623533)
chr8 (1-196)||(37342783-37342979)
chr8 (1-196)||(26739903-26740101)
chr8 (1-176)||(40525694-40525869)
chr8 (1-172)||(20096207-20096382)
chr8 (90-190)||(38619805-38619906)
chr8 (1-196)||(40422161-40422358)
chr8 (89-201)||(11478141-11478254)
chr8 (18-195)||(41801818-41801996)
chr8 (85-196)||(547706-547818)
chr8 (87-196)||(7666-7776)
chr8 (9-172)||(29190186-29190349)
chr8 (85-202)||(40525502-40525620)
chr8 (1-70)||(22763782-22763851)
chr8 (85-201)||(25287788-25287905)
chr8 (85-196)||(38600221-38600333)
chr8 (1-70)||(7521-7590)
chr8 (1-70)||(24529863-24529932)
chr8 (96-196)||(31689896-31689997)
chr8 (1-58)||(41251310-41251367)
chr8 (87-172)||(41251399-41251484)
chr8 (6-69)||(15716005-15716068)
chr8 (1-68)||(23514208-23514275)
chr8 (5-176)||(31690086-31690257)
chr8 (85-194)||(29190430-29190540)
chr8 (1-66)||(547567-547632)
chr8 (85-201)||(36623624-36623741)
chr8 (96-196)||(40422442-40422543)
chr8 (96-199)||(22763593-22763697)
chr8 (6-70)||(25287984-25288048)
chr8 (85-196)||(43866712-43866824)
chr8 (85-172)||(547456-547543)
chr8 (96-194)||(37713699-37713798)
chr8 (85-194)||(20096023-20096133)
chr8 (85-196)||(9632574-9632686)
chr8 (85-196)||(23424513-23424625)
chr8 (110-196)||(24529952-24530039)
chr8 (85-172)||(37343053-37343140)
chr8 (87-169)||(22763869-22763951)
chr8 (131-196)||(23514145-23514211)
chr8 (5-70)||(13566601-13566666)
chr8 (96-196)||(23514022-23514123)
chr8 (85-162)||(26739753-26739830)
chr8 (131-195)||(31690019-31690084)
[»] chr4 (39 HSPs)
chr4 (1-196)||(8287119-8287316)
chr4 (1-196)||(22249734-22249930)
chr4 (1-196)||(47862339-47862534)
chr4 (9-196)||(20086438-20086626)
chr4 (1-196)||(37677849-37678045)
chr4 (1-196)||(53559574-53559770)
chr4 (1-172)||(19916682-19916853)
chr4 (1-172)||(12691593-12691763)
chr4 (4-161)||(13872106-13872263)
chr4 (1-176)||(50245879-50246054)
chr4 (1-172)||(54961618-54961789)
chr4 (1-172)||(33294331-33294501)
chr4 (1-70)||(35730789-35730858)
chr4 (90-196)||(54961432-54961539)
chr4 (85-196)||(12691407-12691519)
chr4 (87-193)||(34238474-34238581)
chr4 (1-70)||(489311-489380)
chr4 (1-70)||(515103-515172)
chr4 (87-172)||(48507690-48507775)
chr4 (85-196)||(47981907-47982019)
chr4 (1-68)||(27813235-27813302)
chr4 (96-198)||(37678130-37678233)
chr4 (85-195)||(47980687-47980798)
chr4 (96-196)||(19916938-19917039)
chr4 (85-196)||(13872340-13872452)
chr4 (87-163)||(27813326-27813402)
chr4 (96-172)||(50246140-50246216)
chr4 (9-63)||(34238665-34238718)
chr4 (85-201)||(20086708-20086825)
chr4 (85-162)||(26601347-26601424)
chr4 (96-196)||(32846363-32846464)
chr4 (85-162)||(47862188-47862265)
chr4 (85-142)||(53559443-53559500)
chr4 (85-196)||(22250004-22250116)
chr4 (146-194)||(32846501-32846549)
chr4 (9-57)||(47980880-47980928)
chr4 (85-172)||(53475857-53475944)
chr4 (131-196)||(8287056-8287122)
chr4 (87-161)||(33294181-33294255)
[»] chr6 (38 HSPs)
chr6 (1-175)||(1066161-1066336)
chr6 (1-196)||(3586213-3586408)
chr6 (6-195)||(7612739-7612931)
chr6 (1-196)||(21880365-21880561)
chr6 (1-196)||(13480395-13480591)
chr6 (1-196)||(20560929-20561124)
chr6 (6-196)||(5064336-5064527)
chr6 (1-196)||(23291931-23292127)
chr6 (1-196)||(32337751-32337949)
chr6 (6-172)||(22494072-22494238)
chr6 (85-196)||(26503625-26503737)
chr6 (87-196)||(20774354-20774464)
chr6 (1-196)||(15819676-15819873)
chr6 (1-196)||(3299560-3299756)
chr6 (85-194)||(20561198-20561307)
chr6 (1-70)||(31879644-31879713)
chr6 (85-196)||(13480209-13480321)
chr6 (85-194)||(5064606-5064716)
chr6 (89-194)||(32337567-32337673)
chr6 (1-70)||(26542804-26542873)
chr6 (85-172)||(23291770-23291857)
chr6 (90-172)||(9607592-9607674)
chr6 (85-196)||(737968-738080)
chr6 (10-161)||(31393378-31393530)
chr6 (115-196)||(16704610-16704692)
chr6 (87-196)||(20994820-20994929)
chr6 (88-196)||(20994965-20995074)
chr6 (132-196)||(1066457-1066521)
chr6 (85-172)||(22493907-22493993)
chr6 (96-162)||(26542652-26542719)
chr6 (127-196)||(7612549-7612619)
chr6 (131-196)||(26542741-26542807)
chr6 (96-196)||(3299841-3299942)
chr6 (90-160)||(30234868-30234938)
chr6 (87-172)||(31879731-31879816)
chr6 (110-162)||(18865156-18865208)
chr6 (85-161)||(21880635-21880711)
chr6 (85-196)||(26542891-26543003)
[»] chr3 (36 HSPs)
chr3 (1-200)||(10998060-10998260)
chr3 (5-194)||(30890398-30890588)
chr3 (1-162)||(28310384-28310545)
chr3 (4-196)||(33458106-33458301)
chr3 (18-196)||(1741388-1741567)
chr3 (1-177)||(53037214-53037390)
chr3 (1-203)||(51279225-51279428)
chr3 (4-196)||(38642632-38642824)
chr3 (1-173)||(11312760-11312932)
chr3 (6-161)||(40257066-40257220)
chr3 (9-172)||(55036864-55037027)
chr3 (1-70)||(10749505-10749574)
chr3 (1-173)||(30804033-30804207)
chr3 (85-196)||(10749319-10749431)
chr3 (1-161)||(35432538-35432697)
chr3 (110-196)||(33989016-33989102)
chr3 (1-70)||(21300261-21300330)
chr3 (1-68)||(24576477-24576544)
chr3 (85-172)||(46670274-46670361)
chr3 (85-162)||(11313006-11313082)
chr3 (1-162)||(22129193-22129357)
chr3 (4-69)||(46670385-46670450)
chr3 (109-194)||(24576291-24576377)
chr3 (1-63)||(33989200-33989262)
chr3 (132-196)||(21255849-21255914)
chr3 (96-196)||(30654762-30654862)
chr3 (85-172)||(33989290-33989377)
chr3 (131-196)||(35432475-35432541)
chr3 (85-174)||(22129030-22129119)
chr3 (146-202)||(35432401-35432458)
chr3 (85-161)||(40256911-40256987)
chr3 (96-194)||(33457919-33458018)
chr3 (85-194)||(55036672-55036782)
chr3 (87-172)||(10749669-10749754)
chr3 (148-196)||(38642990-38643039)
chr3 (128-176)||(53037049-53037097)
[»] chr2 (36 HSPs)
chr2 (1-196)||(16366964-16367160)
chr2 (1-162)||(32519342-32519503)
chr2 (1-196)||(28599614-28599810)
chr2 (12-172)||(9693768-9693928)
chr2 (1-196)||(22309432-22309628)
chr2 (6-196)||(4375741-4375934)
chr2 (1-162)||(18476943-18477104)
chr2 (1-162)||(17284922-17285083)
chr2 (1-172)||(41846418-41846589)
chr2 (1-162)||(37984914-37985075)
chr2 (1-196)||(1150124-1150320)
chr2 (12-156)||(17366820-17366964)
chr2 (1-196)||(20911317-20911512)
chr2 (6-172)||(17580520-17580683)
chr2 (85-196)||(17580329-17580441)
chr2 (1-59)||(5608733-5608791)
chr2 (1-194)||(8089639-8089831)
chr2 (9-176)||(19606939-19607107)
chr2 (87-196)||(20911131-20911241)
chr2 (85-196)||(1149938-1150050)
chr2 (85-196)||(22731803-22731915)
chr2 (85-196)||(45663779-45663891)
chr2 (85-194)||(8089455-8089565)
chr2 (85-172)||(16367234-16367321)
chr2 (21-196)||(9958827-9959002)
chr2 (1-68)||(43681988-43682054)
chr2 (110-196)||(10446833-10446920)
chr2 (96-194)||(28599430-28599529)
chr2 (96-162)||(9959107-9959173)
chr2 (96-173)||(41846674-41846751)
chr2 (90-153)||(5608637-5608700)
chr2 (96-196)||(5608876-5608977)
chr2 (131-195)||(9693937-9694002)
chr2 (128-196)||(9694056-9694125)
chr2 (88-196)||(32519156-32519265)
chr2 (87-202)||(43681851-43681968)
[»] chr7 (30 HSPs)
chr7 (1-172)||(37563380-37563551)
chr7 (1-195)||(44545597-44545792)
chr7 (1-196)||(43937895-43938091)
chr7 (1-162)||(15827757-15827918)
chr7 (1-161)||(5636212-5636372)
chr7 (1-196)||(26825631-26825827)
chr7 (1-197)||(47121464-47121662)
chr7 (88-196)||(26825904-26826013)
chr7 (5-162)||(35262662-35262818)
chr7 (88-196)||(12928313-12928422)
chr7 (1-196)||(27558035-27558235)
chr7 (1-70)||(34454608-34454677)
chr7 (4-162)||(47081883-47082041)
chr7 (1-125)||(23191040-23191165)
chr7 (88-172)||(34454754-34454838)
chr7 (85-196)||(37563625-37563737)
chr7 (85-196)||(43938165-43938277)
chr7 (5-196)||(5280273-5280464)
chr7 (91-197)||(25049438-25049545)
chr7 (1-54)||(19980137-19980190)
chr7 (6-196)||(12928038-12928231)
chr7 (85-162)||(12931009-12931086)
chr7 (5-70)||(20947384-20947449)
chr7 (96-172)||(20947219-20947295)
chr7 (96-196)||(5280553-5280654)
chr7 (96-172)||(47082129-47082200)
chr7 (90-172)||(34454510-34454592)
chr7 (85-162)||(12929525-12929602)
chr7 (132-196)||(44545789-44545854)
chr7 (128-172)||(5636052-5636096)
[»] scaffold0201 (2 HSPs)
scaffold0201 (6-201)||(13889-14085)
scaffold0201 (85-162)||(14164-14241)
[»] scaffold0321 (2 HSPs)
scaffold0321 (6-196)||(10854-11045)
scaffold0321 (80-172)||(10688-10780)
[»] scaffold0202 (1 HSPs)
scaffold0202 (3-176)||(14424-14596)
[»] scaffold0279 (1 HSPs)
scaffold0279 (1-196)||(10854-11054)
[»] scaffold0233 (2 HSPs)
scaffold0233 (1-196)||(8620-8815)
scaffold0233 (96-195)||(8435-8535)
[»] scaffold1493 (2 HSPs)
scaffold1493 (85-201)||(864-981)
scaffold1493 (6-70)||(721-785)
[»] scaffold0206 (1 HSPs)
scaffold0206 (85-201)||(10321-10438)
[»] scaffold0251 (1 HSPs)
scaffold0251 (121-201)||(12015-12096)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-66)||(120390-120451)


Alignment Details
Target: chr5 (Bit Score: 119; Significance: 1e-60; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 201 - 331
Target Start/End: Original strand, 14553268 - 14553398
Alignment:
Q  201 aaacattgatgtttaccattttattcttttaataggataatttaaagcaggagaaatctaattaaagtaggagcaatctcacaataataaaaacaaaatc 300  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14553268 aaacattgatgtttaccattttatccttttaataggataatttaaagtaggagaaatctaattaaagtaggagcaatctcacaataataaaaacaaaatc 14553367  T
Q  301 ttattcaattattgtttacaatcttcacttt 331  Q
    ||||||||||||| |||||||||||||||||    
T  14553368 ttattcaattattttttacaatcttcacttt 14553398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22533587 - 22533385
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||       | || | | |||||||||| |||    
T  22533587 aagccaaccacctcgcccaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattatgaccaaaagttaaa 22533488  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaagcatt 199  Q
    |||||| |||||| |||||||||||  || |||||||||||| | |||||||||||||||||  |||||||| | ||  ||||| |||||||||||| ||    
T  22533487 tgattaaattttgtagtggcagattggaatgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaagcctt 22533388  T
Q  200 taa 202  Q
    |||    
T  22533387 taa 22533385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7015706 - 7015509
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca-tagtcaggaccaaaagtcaa 99  Q
    |||||||||||||||  ||||||||||||||||||| | |||||| |||||||||| |||||| ||||||        | || | |||||||||||||||    
T  7015706 aagccaaccacctcgtccaatcatcacttgccacataggcaccacgtcgctaatgatagcccatctcagcaaaaaaaaactaattaggaccaaaagtcaa 7015607  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||   ||||||||||||||||  || ||||| |||||| ||||| |||||||||||||| |||||||| || | |||||| ||||||||||||    
T  7015606 atgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 7015509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13064596 - 13064757
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||         || | ||||||||||||||||    
T  13064596 aagcaaaccacctcgcccaatcatcacttgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 13064695  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||   ||||||| ||||||||  |||||||| ||||||||  ||||||||||||||||    
T  13064696 tgattaatatttgcaggggcagattggaaggattagtaactttagagacgaaaattcaaatg 13064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 41339547 - 41339390
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgat 104  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||| |||||||| |||||||||       | || | ||||||||||||||||||||    
T  41339547 caaccacctcacccaatcatcacttgccacatggacaccacgtcgctgatgacagctcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 41339448  T
Q  105 tatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
     | ||||||||||||||||||  || |||||  ||||| | |||||||||||||||||    
T  41339447 aaaattttgcagtggcagattggaaagattagcaacttcagggacgaaaattcaaatg 41339390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 25253273 - 25253469
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||| | |||||||||||||||||||||  ||||| ||||||||||||||||||||||||         || | ||||||||||||||||    
T  25253273 aagccaaccacctcacccaatcatcacttgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 25253372  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||  ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  25253373 tgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 25253469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 25317064 - 25317260
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||| | |||||||||||||||||||||  ||||| ||||||||||||||||||||||||         || | ||||||||||||||||    
T  25317064 aagccaaccacctcacccaatcatcacttgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 25317163  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||  ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  25317164 tgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 25317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 33735510 - 33735339
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||       | || | || |||||||||||||    
T  33735510 aagcaaaccacctcgcccaatcatcacttgccacatggacaccacgtcgctaatgacatcccacctcagcaaaaaaacctaattagaaccaaaagtcaaa 33735411  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||| | ||||||  |||||||| ||| || | ||||||||| |||||||| ||||||||    
T  33735410 tgattaatatttgcagggacagattggaaggattagtaatttcagggacgaaaaatcaaatggcctatattt 33735339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 32052421 - 32052225
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| |||| ||| |||||||||||| |||||| |||||||||||||||||||| |||         || | |||| |||||||||||    
T  32052421 aagcaaaccacctcgcccaatgatcgcttgccacatgggcaccacgtcgctaatgacagcccaccttagcaaaaaaatctaattaggatcaaaagtcaaa 32052322  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||| ||||  |||||||| |||||| | |||||||||||||||||  ||||||||||| | ||||||||| |||||||||    
T  32052321 tgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaagc 32052225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12990975 - 12991136
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||         || | |||| |||||||||||    
T  12990975 aagcaaaccacctcgcccaatcatcacttgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaa 12991074  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||   ||||||| || |||||  |||||||| |||||| |  ||||||||||||||||    
T  12991075 tgattaatatttgcaggggtagattggaaggattagtaacttcagagacgaaaattcaaatg 12991136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18013799 - 18013969
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||||||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||       | || | |  |||||||||||||    
T  18013799 aagcaaaccacctcgctcaatcatcacttgtcacatgcgcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaaaaccaaaagtcaaa 18013898  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    | ||||   ||||||| |||||||| ||||||||  |||||| | ||||||||||| |||||| ||||||||    
T  18013899 taattaatatttgcagaggcagattgaaaggattggtaacttca-ggacgaaaatttaaatggcctatattt 18013969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 27753676 - 27753517
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||| |        | || | |  | ||||||||||    
T  27753676 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaaacctatttataatcaaaagtcaa 27753577  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaa 159  Q
    |||||||   ||||||||||||| ||  |||||||| |||||| ||||||||||||||||    
T  27753576 atgattaatatttgcagtggcagtttggaaggattagtaacttcatggacgaaaattcaa 27753517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 6421814 - 6421658
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    |||||||| || |||||||||| |||||||||| |||||| ||||||||||||  ||||||||||       | || | |||||||||||||||||||||    
T  6421814 aaccaccttgcccaatcatcacatgccacatgggcaccacgtcgctaatgacaatccacctcagcagaaaaacctaattaggaccaaaagtcaaatgatt 6421715  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |   |||| || |||||||| ||| ||||| |||||| | |||| ||||||||||||    
T  6421714 aatatttgtaggggcagattgaaaagattagtaacttcaaggacaaaaattcaaatg 6421658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 8323247 - 8323403
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgat 104  Q
    |||||||||||| |||||||||||||||||||   |||||| ||| |||||| |||||||||||||       | || | ||||||||||||||||||||    
T  8323247 caaccacctcgcccaatcatcacttgccacataagcaccacgtcgttaatgatagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgat 8323346  T
Q  105 tatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    ||   |||||| ||||| | | |||| |||| |||||| | ||||||||||||||||    
T  8323347 taatatttgcaatggcaaaatgaaagaattagtaacttcaaggacgaaaattcaaat 8323403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 20704917 - 20705060
Alignment:
Q  18 caatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattttgcagt 117  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||||         || | ||||||||||||||||||||||   |||||||     
T  20704917 caatcatcacttgctacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcag- 20705015  T
Q  118 ggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||||| ||| ||||| |||||| |  ||||||||||||||||    
T  20705016 ggcagattgaaaagattagtaacttcaaagacgaaaattcaaatg 20705060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34404671 - 34404740
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||||||||||    
T  34404671 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcactaatgacatcccacctcagc 34404740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 33735584 - 33735696
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | ||||||    
T  33735584 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 33735683  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  33735684 gacctatttaagc 33735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 37945107 - 37944995
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||  |||||||||| || ||||||    
T  37945107 aggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaa 37945008  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  37945007 gacctatttaagc 37944995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 37945198 - 37945339
Alignment:
Q  18 caatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattttgcagt 117  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||| |         || | | || |||||||||||||||||   ||||||      
T  37945198 caatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaatctaattatgatcaaaagtcaaatgattaatatttgcaag 37945297  T
Q  118 ggcagattaaaaggattaataactttatggacgaaaattcaa 159  Q
    |||||||| ||||||||| |||||| | ||||||||||||||    
T  37945298 ggcagattgaaaggattagtaacttcagggacgaaaattcaa 37945339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 14553420 - 14553479
Alignment:
Q  318 acaatcttcactttaaagtggaaatactttgatttatttattaaaattatttgagtgggg 377  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  14553420 acaatcttcactttaaagtggacatattttgattaatttattaaaattatttgagtgggg 14553479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 18934988 - 18935094
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaac 186  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||| ||| || | ||||||||| |||||||  ||||||||||| | || ||||||    
T  18934988 accaaaagtcaaatgattaaattttgcagtggcaaattagaaggattagtaatttcagggacgaaaa-tcaaatgacctatatttacagggacaaaaaac 18935086  T
Q  187 ctatttaa 194  Q
    ||||||||    
T  18935087 ctatttaa 18935094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16118148 - 16117983
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||| || |||   |||||||| ||||||       | || | ||||||||||||||||    
T  16118148 aagccaaccatctcgcccaatcatcacttgccacatgtgcaccacgtcactat--acagcccatctcagcaaaaaaacctaattaggaccaaaagtcaaa 16118051  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    |||||| |||||||||||||        ||||||| |||||| | |||||||||||||||||  ||||||||||||    
T  16118050 tgattaaattttgcagtggc--------aggattagtaacttcagggacgaaaattcaaatgacctatatttacag 16117983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14745561 - 14745449
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | ||| |||||||||||||  |||||||| || | ||||||    
T  14745561 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaa 14745462  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  14745461 gacctatttaagc 14745449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 32052495 - 32052607
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | ||||||    
T  32052495 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 32052594  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  32052595 gacatatttaagc 32052607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9915518 - 9915587
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||||| |||||||||||||| |||||  |||||| ||||||| ||||||||| ||||||    
T  9915518 aagccaaccacctcgcccaatcatcacttgcgacatgagcaccacgtcgctaacgacagcccaactcagc 9915587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 14745584 - 14745671
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||  ||||||||  |||||||| |||||| |  ||||||||||||||||| ||||||||    
T  14745584 aggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatggcctatattt 14745671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 25253199 - 25253112
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||  ||||||||    
T  25253199 aggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatattt 25253112  T

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Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 25316989 - 25316902
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||  ||||||||    
T  25316989 aggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatattt 25316902  T

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Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 21261068 - 21261246
Alignment:
Q  18 caatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattttgcagt 117  Q
    ||||||| | ||||||||||| |||||| || ||||||||| ||||||||| |       | || | ||||||||||||||||||| |  | ||||| ||    
T  21261068 caatcattatttgccacatgggcaccacgtcactaatgacaacccacctcatcaaaaaaac-taattaggaccaaaagtcaaatgagtgaactttgcggt 21261166  T
Q  118 ggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||||  ||||||||||||||| ||||| ||||| ||||| |  |||| ||| || |||||||| || |||||||||    
T  21261167 ggcagattggaaggattaataacttcatggatgaaaactcaaaggacctatctttgcaggaacgaaagacatatttaagc 21261246  T

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Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 6421893 - 6421970
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||||||||||||   ||||||| |||| ||| ||||||||| ||| || | |||||||||||||||||    
T  6421893 aggaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatg 6421970  T

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Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 7015791 - 7015892
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||   ||||||||||||||||  |||||||| |||||| | ||||||||||||||| |   ||||||| | || |||||| ||||||||||    
T  7015791 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaagacctatttaa 7015890  T
Q  195 gc 196  Q
    ||    
T  7015891 gc 7015892  T

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Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 22024152 - 22024253
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaa 194  Q
    |||||||||||   |||||||||||| |||  |||||||| |||||| |  ||||||||||||||||  |||||||| |||| |||||| || |||||||    
T  22024152 tcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaagacgtatttaa 22024251  T
Q  195 gc 196  Q
    ||    
T  22024252 gc 22024253  T

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Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 41339670 - 41339735
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaag 195  Q
    ||||| ||||||||||||||||||||||||||  |||||||||| ||||||||  || ||||||||    
T  41339670 gattagtaactttatggacgaaaattcaaatgacctatatttacaagaacgaatgacatatttaag 41339735  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 18013722 - 18013639
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatt 171  Q
    |||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| |  ||||||||||||||||  |||||||    
T  18013722 accaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcactgacgaaaattcaaatgacctatatt 18013639  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 8323126 - 8323081
Alignment:
Q  128 aaggattaataactttatggacgaaaattcaaatggtctatattta 173  Q
    |||||||| |||||| |||||||||||||||||||  |||||||||    
T  8323126 aaggattagtaacttcatggacgaaaattcaaatgacctatattta 8323081  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18934900 - 18934957
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgaca 58  Q
    ||||||| ||||| || ||||||||||||||||||||  |||||| ||| ||||||||    
T  18934900 aagccaatcaccttgcccaatcatcacttgccacatgtgcaccacgtcgttaatgaca 18934957  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 34404554 - 34404485
Alignment:
Q  128 aaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||| |||||| |  ||||||||||||||||  |||||||| || |||||||| ||||||||||||    
T  34404554 aaggattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 34404485  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 18934801 - 18934749
Alignment:
Q  110 tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||| ||||| | | ||||||||| |||||| |||||||||||||||||||    
T  18934801 tttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatg 18934749  T

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Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24701467 - 24701266
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||       | || | |||||||||||| |||    
T  24701467 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagttaaa 24701368  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagcatt 199  Q
    |||||| ||||||||||||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| |||| |||||| || ||||||||| ||    
T  24701367 tgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagcctt 24701268  T
Q  200 ta 201  Q
    ||    
T  24701267 ta 24701266  T

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Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 5183703 - 5183507
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||||         || | ||||||||||||||||    
T  5183703 aagcaaaccacctcgcccaatcatcacttgccacatgtgcaccacgtcgctaatgatagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 5183604  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||||||||  |||||||| ||||||||||||||||||||||||||  |||||||| || |||||||| || |||||||||    
T  5183603 tgattaatatttgcaggggcagattggaaggattagtaactttatggacgaaaattcaaatgacctatattttcaggaacgaaagacatatttaagc 5183507  T

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Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 26953293 - 26953102
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||         || | |||||||||||||||||||||    
T  26953293 aaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccagctcagcaaaaaaatctaattaggaccaaaagtcaaatgatt 26953194  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaagc 196  Q
    |   ||||||| |||||||| ||||||||| |||||| | |||||||||||||||| |||||||||| | || |||||| || |||||||||    
T  26953193 aatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaaagacatatttaagc 26953102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 739405 - 739601
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||| |||||||||       | || | |||| |||||||||||    
T  739405 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagctcacctcagcaaaaaaacctaattaggatcaaaagtcaaa 739504  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagc 196  Q
    ||||||   ||||||| | |||||| ||||||||| |||||| ||| |||||||||||||||  |||||||| |||| ||||||| | |||||||||    
T  739505 tgattaatatttgcagggacagattgaaaggattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaaaatcatatttaagc 739601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 2953661 - 2953465
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         || | | ||||||||||||||    
T  2953661 aagcaaaccacctcgcccaatcatcacttgccacatgtgcaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaa 2953562  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||||||||| |||||||| |||||||||||||||||  ||||||||||| | |||||| || |||||||||    
T  2953561 tgattaatatttgcaggggcagattgaaaggattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 2953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 48380872 - 48381066
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc--nnnnnnncatagtcaggaccaaaagtcaaatg 102  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||         |||| | ||||||||||||||||||    
T  48380872 caaccacctcgttcaatcatcacttgccacatggacaccacgtcgctaatgacaacccaccttagcaaaaaaaaacataattaggaccaaaagtcaaatg 48380971  T
Q  103 attatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||   ||||||| ||||||||  ||||||||||||||||| ||||||||||| |||||   |||||||||| | |||||| || |||||||||    
T  48380972 attaatatttgcagcggcagattggaaggattaataactttaaggacgaaaatttaaatgaattatatttacagggacgaaagacttatttaagc 48381066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 172
Target Start/End: Complemental strand, 49003067 - 49002902
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||| |       | || | |||||||||||||||||||||    
T  49003067 aaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaacc-taattaggaccaaaagtcaaatgatt 49002969  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |   ||||||| ||||||||  |||||||| |||||| |||||||||||||||||||  ||||||||    
T  49002968 aatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatattt 49002902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 29042942 - 29043138
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||||| || ||||||||||||||||||||| |||||| ||||||||||  ||||||||||||         || | |||| |||||||||||    
T  29042942 aagcaaaccaccttgcccaatcatcacttgccacatgggcaccacgtcgctaatgatggcccacctcagcaaaaaaatttaattaggatcaaaagtcaaa 29043041  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||||||||| |||||| | |||||||||||||||||| |||||||| |||| |||||| || |||||||||    
T  29043042 tgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaagc 29043138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1047391 - 1047566
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||         || | ||||||||||||||||    
T  1047391 aagcgaaccacctcgcccaatcatcacttgccacatgtacaccacgtcgctaatgacaacccacctcagctaaaaaatctaattaggaccaaaagtcaaa 1047490  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    ||||||   ||||||| ||||||||  |||||||| |||||| |  ||||||||||||||||  ||||||||||||    
T  1047491 tgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacag 1047566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 46849855 - 46849680
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||| |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||       | || | | ||||||||||||||    
T  46849855 aagcaaaccacatcgctcaatcatcacttgccacatgggcaccacgtcgctaatgatagcccacctcagcaaaaaaacctaattatgaccaaaagtcaaa 46849756  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    ||| ||   ||| ||| |||||||| |||| ||||||||||| | |||||||||||||||||  ||||||||||||    
T  46849755 tgactaatatttacaggggcagattgaaagaattaataacttcagggacgaaaattcaaatgacctatatttacag 46849680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 12577209 - 12577011
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnn-catagtcaggaccaaaa-gtca 98  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| || |||||||||||||| |||||||||        | || | |||||||||| ||||    
T  12577209 aagcaaaccacctcgcccaatcatcacttgccacatgggcactacgtcgctaatgacagctcacctcagcaaaaaaaacctaattaggaccaaaaagtca 12577110  T
Q  99 aatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||||   ||||||| |||||||| ||| ||||| |||||| || ||||||||||||||||| ||||||||||| | |||||| || |||||||||    
T  12577109 aatgattaatatttgcaggggcagattgaaatgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagc 12577011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 30830328 - 30830163
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||        |  | | |||| ||||| ||||    
T  30830328 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccaccccagcaaaaaaaacccaattaggatcaaaattcaa 30830229  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtc 165  Q
    ||||||| ||||||| ||||||||||  || ||||| |||||| | ||||||||||||||||||||    
T  30830228 atgattaaattttgcggtggcagattggaatgattattaacttcagggacgaaaattcaaatggtc 30830163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33347613 - 33347452
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |       | || | ||||||||||||||||    
T  33347613 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaa 33347514  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||   |||| || ||||||||  ||| |||| |||||| | |||||||| ||||||||    
T  33347513 tgattaatatttgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatg 33347452  T

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Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37152735 - 37152564
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||||||  || | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||         || | |||| |||||||||||    
T  37152735 aagccaaccagttcacccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaa 37152636  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||  ||||||||  |||||||| |||||| |||||||||||||||||||  ||||||||    
T  37152635 tgattagtatttgcacgggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatattt 37152564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 739332 - 739214
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | ||||||||||||||||||||||||||| || | ||||||    
T  739332 aggaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacgaaa 739233  T
Q  184 aacctatttaagcatttaa 202  Q
    ||||||||||||| |||||    
T  739232 aacctatttaagcctttaa 739214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 25415033 - 25414870
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattata 108  Q
    |||||||| ||||||||||||| ||||||| |||||| |||||||||||| | |||||||||       | || | ||||||||||||||||||||||      
T  25415033 cacctcgcccaatcatcacttgtcacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaat 25414934  T
Q  109 ttttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
     ||||||| ||||||||  |||||||| |||||| |  || |||||||||||||| ||||||||    
T  25414933 atttgcaggggcagattggaaggattagtaacttcagagaagaaaattcaaatggcctatattt 25414870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 29980835 - 29980662
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||| |||||  ||||||||||||||||||||| |||||| | || |||||||||||||||||||       | || | ||||||||||||||||    
T  29980835 aagcaaaccgcctcgtccaatcatcacttgccacatgggcaccacgttgcaaatgacagcccacctcagcaaaaaacc-taattaggaccaaaagtcaaa 29980737  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca 175  Q
    ||||||   ||||||| ||||||||  || ||||| |||||| |||| ||||||||||||||  |||||||||||    
T  29980736 tgattaatatttgcaggggcagattggaaagattagtaacttcatgggcgaaaattcaaatgacctatatttaca 29980662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46544928 - 46544859
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  46544928 aagccaaccacctcgctcaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagc 46544859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 6334853 - 6334682
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||||||| |||||||||||||||||| |||||||  ||||| |||||||||||||| ||||| ||        | || | || | |||||| ||||    
T  6334853 aagccaaccacatcgctcaatcatcacttgtcacatgggtaccacgtcgctaatgacagctcacctaagtaaaaaaacctacttagtatcaaaagccaaa 6334754  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   |||||||||||||||   |||||||| ||||||||   |||||||||||||||||||||||||    
T  6334753 tgattaatatttgcagtggcagatcggaaggattagtaactttaacaacgaaaattcaaatggtctatattt 6334682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 33030609 - 33030717
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaac 186  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||| ||| || ||||||||||||||||||| ||||||||| || |||||||| |     
T  33030609 accaaaagtcaaatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatgatctatatttgcaggaacgaaaga- 33030707  T
Q  187 ctatttaagc 196  Q
    ||||||||||    
T  33030708 ctatttaagc 33030717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 6056563 - 6056762
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc--nnnnnnncatagtcaggaccaaaagtca 98  Q
    |||| ||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||         | || | | ||||||| ||||    
T  6056563 aagcaaaccacctcactcaatcatcacttgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaacctaattatgaccaaatgtca 6056662  T
Q  99 aatgattatattttgcagtggcagattaaaaggattaataactt-tatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||||   ||||||| |||||||| ||||||||| ||||||  | ||| ||||||||||||||  ||||||| || | |||||| || |||||||||    
T  6056663 aatgattaatatttgcaggggcagattgaaaggattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaaagacatatttaagc 6056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 34176117 - 34175923
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca-tagtcaggaccaaaagtcaaatg 102  Q
    ||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||        | || | | ||||||||||||||||    
T  34176117 ccaaccatctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaaaactaattatgaccaaaagtcaaatg 34176018  T
Q  103 attatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaagc 196  Q
    ||||   ||| |||| | | | |  ||||||||||||||| |  ||||||||||||||||  ||| |||||| ||||| ||| ||||||||||||    
T  34176017 attaacattttcagtagtaaaatggaaggattaataacttcaatgacgaaaattcaaatgacctaaatttacaagaacaaaagacctatttaagc 34175923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 5926792 - 5926904
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  | |||||| |||||| | ||| ||||||||||||||||||||||| || | ||||||    
T  5926792 aggaccaaaagtcaaatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaa 5926891  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  5926892 gacctatttaagc 5926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8890406 - 8890338
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcag 69  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  8890406 aagcgaaccacctcgtccaatcatcacttgccacatgggcaccacatcgctaatgacaacccacctcag 8890338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 49003146 - 49003258
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||||||||| |||||||||||   ||||||| ||||||||  |||||||| |||||| |||||||||||||||||||  |||||||| || | ||||||    
T  49003146 aggaccaaaaatcaaatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaa 49003245  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  49003246 gacctatttaagc 49003258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51933971 - 51933903
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcag 69  Q
    |||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  51933971 aagccaaccacctcacccaatcatcacttgccacatggacaccacgtcgctaatgacatcccaactcag 51933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10019570 - 10019399
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||||||||| ||||| |||||||   ||||||||||| |||||| ||||||||||||||||||||||||        | || | |||| ||||||||||    
T  10019570 aagccaaccatctcgcccaatcatattttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggatcaaaagtcaa 10019471  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||| |||||||| | | |||||  |||||||| |||||| | ||| ||||||| |||||| ||||||||    
T  10019470 atgattaaattttgcaatagtagattggaaggattagtaacttca-ggatgaaaatttaaatggcctatattt 10019399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 35312170 - 35311977
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc--nnnnnnncatagtcaggaccaaaagtcaaat 101  Q
    ||||||||| ||  ||||||||||||||||||||| |||||  |||||||||||| |||||||||||         | || | |||||  ||||||||||    
T  35312170 ccaaccaccccgtccaatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaaaacctaattaggactgaaagtcaaat 35312071  T
Q  102 gattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    ||||| |||||||| || ||||||  || ||||| |||||| |  ||||||||||||||||  ||||||||| | | |||||| ||||||||||    
T  35312070 gattaaattttgcaatgacagattggaatgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaa 35311977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 49989908 - 49989819
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac 174  Q
    ||||||||||||||||||||||   ||||||| |||||||| |||||||||||||||| | | ||||||| | |||||||| ||||||||    
T  49989908 aggaccaaaagtcaaatgattaatatttgcagaggcagattgaaaggattaataacttcaagaacgaaaaattaaatggtccatatttac 49989819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 12577283 - 12577395
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||||||| ||||||||| |||||| | ||||||||||| |||||   ||||||| || | ||||||    
T  12577283 aggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatgacttatatttgcagggacgaaa 12577382  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  12577383 gacctatttaagc 12577395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 37152809 - 37152925
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||| ||||||||||||||||   ||||||| ||||||||  |||||||| |||||| |  ||||||||||||||||| |||||||| || | ||||||    
T  37152809 aggactaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaaa 37152908  T
Q  184 aacctatttaagcattt 200  Q
     || |||||||||||||    
T  37152909 gacatatttaagcattt 37152925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 49989980 - 49990179
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca---tagtcaggaccaaaagtc 97  Q
    |||| ||||||||||| ||||||||||||| ||||||| |||||| |||||||| |||| ||| ||||||        |   || | | |||||||||||    
T  49989980 aagcaaaccacctcgcccaatcatcacttgtcacatgggcaccacgtcgctaataacagtccatctcagcaaaaaaaaaatctaattaagaccaaaagtc 49990079  T
Q  98 aaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||||   |||| || || |||||  ||||||||||||||| |  ||||||||||||||| |||||||||| || | |||||| || |||||||||    
T  49990080 aaatgattaatatttgtaggggtagatttgaaggattaataacttcaaagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaagc 49990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 172
Target Start/End: Complemental strand, 5926712 - 5926545
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnn-catagtcaggaccaaaagtcaaatgat 104  Q
    ||||||||| | ||||||||||||||||||||| |||||  || ||||| ||||||||||||| |        | || | | ||||||||||||||||||    
T  5926712 aaccacctcacccaatcatcacttgccacatgggcaccaggtcactaataacagcccacctcaacaaaaaaaacctaattaagaccaaaagtcaaatgat 5926613  T
Q  105 tatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||  ||||||||    
T  5926612 taatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatgacctatattt 5926545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 48380783 - 48380682
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||  ||||||| |||||||||  |||||||| |||||| |  ||||||||||||||||  |||||||||| || |||||| ||||||||||    
T  48380783 tcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaa 48380684  T
Q  195 gc 196  Q
    ||    
T  48380683 gc 48380682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 1040411 - 1040299
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||| |||||||||||||  ||||||| | || ||||||    
T  1040411 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaa 1040312  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  1040311 gacatatttaagc 1040299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 1047317 - 1047205
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||| |||||||||||||  ||||||| | || ||||||    
T  1047317 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaa 1047218  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  1047217 gacatatttaagc 1047205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 2953735 - 2953847
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||||||||| |||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | ||||||    
T  2953735 aggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 2953834  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  2953835 gacatatttaagc 2953847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 19755676 - 19755788
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||  ||||||||||||  |||||||| || | ||||||    
T  19755676 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaa 19755775  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  19755776 gacctatttaagc 19755788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 33347687 - 33347799
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||  ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | ||||||    
T  33347687 aggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaa 33347786  T
Q  184 aacctatttaagc 196  Q
     |||||| |||||    
T  33347787 gacctatataagc 33347799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 46849929 - 46850041
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||| | |||||| | |||||||||||||||||  |||||||| || | ||||||    
T  46849929 aggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 46850028  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  46850029 gacctatttaagc 46850041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 5183777 - 5183864
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||  |||||| | |||||||||||||||||| ||||||||    
T  5183777 aggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatattt 5183864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 52454952 - 52454782
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||| |||||  |||||||||| ||| ||||||| |||||| || ||||||||| ||||||||| |       | || | | ||||| ||||||||    
T  52454952 aagccaactacctcattcaatcatcatttgtcacatgggcaccacgtcactaatgacaacccacctcaacaaaaaaacctacttatgaccagaagtcaaa 52454853  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |  | |||||| |||||||||||||  || |||| ||||||| ||||||||||| |||||||  ||||||||    
T  52454852 tattaatattt-gcagtggcagattggaatgattgataacttcatggacgaaaagtcaaatgacctatattt 52454782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 52455052 - 52455102
Alignment:
Q  111 ttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  52455052 ttgcagtggcagattggaaggattaataactttatggacgaaaatttaaat 52455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46364772 - 46364703
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||| |||||||| || |||||||||||||||||||||  ||||| |||||||||||||  |||||||||    
T  46364772 aagcaaaccaccttgcccaatcatcacttgccacatggggaccacgtcgctaatgacagttcacctcagc 46364703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 29980909 - 29981021
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaa 183  Q
    |||||||||| |||||||||||   ||||||| |||| |||  |||||||| ||||||   |||||||||||||||||  |||||||| || | ||||||    
T  29980909 aggaccaaaaatcaaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgcaaagacgaaa 29981008  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  29981009 gacctatttaagc 29981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 29042866 - 29042759
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaaac 186  Q
    |||||||| |||||||||||   ||||||| | ||||||  |||||||||||||||    |||||||| |||||||| |||||||||| | |||||| ||    
T  29042866 gaccaaaaatcaaatgattaatatttgcagggacagattggaaggattaataacttccgcgacgaaaaatcaaatggcctatatttacgggacgaaagac 29042767  T
Q  187 ctatttaa 194  Q
     |||||||    
T  29042766 atatttaa 29042759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19755602 - 19755533
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||| |||||| |||| |||||||||||| |||||||| |||||| || ||||||||| ||||| |||||    
T  19755602 aagcaaaccacttcgcccaatcatcacttaccacatgggcaccacgtcactaatgacaacccacgtcagc 19755533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 6056489 - 6056377
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| | || |||  |||||| | ||| |||| |||||||||||||||||  |||||||| || | ||||||    
T  6056489 aggaccaaaagtcaaatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatgacctatatttgcagggacgaaa 6056390  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  6056389 gacatatttaagc 6056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 37152541 - 37152469
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||||||||||||||   ||||||  |||| |||  |||||||| |||||| |||||||||||||||||||    
T  37152541 caaaagtcaaatgattagtatttgcaagggcatattggaaggattagtaacttcatggacgaaaattcaaatg 37152469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 46364846 - 46364922
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |||| |||||||||||||||||   ||||||| |||| ||| ||||||||| ||| || | ||||||||||||||||    
T  46364846 aggatcaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaat 46364922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 33030422 - 33030335
Alignment:
Q  110 tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||||||||||||  ||| |||| |||||| | |||||||||||||||||  |||||||| || | || ||| ||||||||||||    
T  33030422 tttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagc 33030335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 8890322 - 8890213
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaa 185  Q
    ||||||||||||||||||||   |||| |||||||||||  || ||||| |||||| | |||| || |||||||||  |||||||| || | |||||| |    
T  8890322 gaccaaaagtcaaatgattaatatttggagtggcagattggaaagattagtaacttcagggac-aatattcaaatgacctatatttgcagggacgaaata 8890224  T
Q  186 cctatttaagc 196  Q
    |||||||||||    
T  8890223 cctatttaagc 8890213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 46364685 - 46364575
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaa 185  Q
    ||||||||||||||||||||   |||| || | |||||  ||| ||||| |||||| | |||||||||||||||||  |||||||| || | |||||| |    
T  46364685 gaccaaaagtcaaatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaga 46364586  T
Q  186 cctatttaagc 196  Q
    | |||||||||    
T  46364585 catatttaagc 46364575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 33030475 - 33030523
Alignment:
Q  148 acgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||||||||||||||| ||||||||| || | ||||||||||||||||||    
T  33030475 acgaaaattcaaatgatctatatttgcagggacgaaaaacctatttaag 33030523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 35312236 - 35312172
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    ||||| |||||| || ||| |||||||||||||||||||||| || | |||||| ||||||||||    
T  35312236 gattagtaacttcatcgacaaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 35312172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 46545013 - 46545093
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    |||||||||||   |||||||||||| | |  |||||||| |||||| | |||||||| ||||||||  ||||||||||||    
T  46545013 tcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatgacctatatttacag 46545093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 51933880 - 51933775
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag-aacgaaaaa 185  Q
    ||||||||| ||||||||||   ||| ||||||||||||||||| |||| ||| |  |||||||  ||||||||||   ||||||| | | |||||||||    
T  51933880 gaccaaaagacaaatgattaatatttacagtggcagattaaaagaattagtaattcaatggacg--aattcaaatgacatatattttccgaaacgaaaaa 51933783  T
Q  186 cctattta 193  Q
    ||||||||    
T  51933782 cctattta 51933775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 43866898 - 43867094
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||||  |||||||||||||||||||||||       | || | ||||||||||||||||    
T  43866898 aagcaaaccacctcacccaatcatcacttgccacatgggcaccacgccgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaa 43866997  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| || | ||||||||| |||||||||    
T  43866998 tgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaaaaacatatttaagc 43867094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 23424706 - 23424895
Alignment:
Q  8 ccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattat 107  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||       | || | |||||||||| |||||||||||     
T  23424706 ccaccttgctcaatcatcacttgccacatggataccacatcgctaatgtcagcccacctcagcaacaaaacctaattaggaccaaaaatcaaatgattaa 23424805  T
Q  108 attttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
      ||||||| ||||||||  || ||||| |||||| | |||||||||||||||||| |||||||| || |||||||| || |||||||||    
T  23424806 tatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaagc 23424895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 11478332 - 11478507
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||| |||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||       | || | |||||||||| |||||    
T  11478332 aagcaaaccacatcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaaatcaaa 11478431  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    ||||||   ||||||| ||||||||  |||||||| |||||| | |||||||| ||||||||||||||||||||||    
T  11478432 tgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaagttcaaatggtctatatttacag 11478507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27856929 - 27857100
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||       |||| | ||||||||||||||||    
T  27856929 aagcaaaccacctcgctcaatcatcacttgccacatgggcaccacgtcgccaatgacagcccaccttagcaaaaaaacataattaggaccaaaagtcaaa 27857028  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||  ||||||||  || ||||| |||||| | |||||||||||||||||| ||||||||    
T  27857029 tgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatattt 27857100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 41182083 - 41182244
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||| ||       | || | ||||||||||||||||    
T  41182083 aagcaaaccacctcgcccaatcatcatttgccacatgggcaccacgtcgctaatgacagcccacctcggcaaaaaaacctaattaggaccaaaagtcaaa 41182182  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||   ||||||| |||||||| ||| ||||| |||||| | |||||||||||||||||    
T  41182183 tgattaatatttgcaggggcagattgaaatgattagtaacttcagggacgaaaattcaaatg 41182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 35163699 - 35163523
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca-----tagtcaggaccaaaag 95  Q
    ||||||||||||| || ||||||||||||||||||||| |||||| |||||||||||| |||||||||||        |     || | | |||||||||    
T  35163699 aagccaaccaccttgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaccccacctcagcaaaaaaaaaaaacctaattatgaccaaaag 35163600  T
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||| |||||||||||||||||| ||||||| | |||||| | ||||||||||||||||||  |||||||    
T  35163599 tcaaatgattaaattttgcagtggcagattgaaaggatcagtaacttcaaggacgaaaattcaaatggcttatattt 35163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 36623533 - 36623353
Alignment:
Q  18 caatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca-tagtcaggaccaaaagtcaaatgattatattttgcag 116  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||        | || | ||||||||||||||||||||||   |||||||    
T  36623533 caatcatcacttgccacatgggcaccacgtcgctaatgacagcccaactcagcaaaaaaaaactaattaggaccaaaagtcaaatgattaatatttgcag 36623434  T
Q  117 tggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
      ||||||| ||||||||| |||||| | |||||||||||||||||| |||||||| || | ||||||||| |||||||||    
T  36623433 gagcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaagc 36623353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 37342979 - 37342783
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||| | ||||||||||||||||||||| |||||  |||||||||||| |||||||||||       | || | ||||||||||||||||    
T  37342979 aagcaaaccacctcacccaatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaaa 37342880  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||| |||| ||||||||| |||||| | | ||||||||||||||||||| ||||| || | ||||||||  |||||||||    
T  37342879 tgattaatatttgcaggggcggattgaaaggattagtaacttcaggaacgaaaattcaaatggtctgtatttgcagggacgaaaaagatatttaagc 37342783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 26739903 - 26740101
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||        | || | || ||||||||||||    
T  26739903 aagcaaaccacctcgcccaatcatcacttggcacatggacaccacatcgctaatgacagcccacctcagcaaaaaaaacttaattagaaccaaaagtcaa 26740002  T
Q  100 atgatt-atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||| ||||||    | ||||||||  |||||||| |||||| |||||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  26740003 atgattaatatttgtagggggcagattgcaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 26740101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 40525694 - 40525869
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||| |       | || | ||||||||||||||||    
T  40525694 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacttcgctaatgacatcccacctcatcaaaaaaacctaattaggaccaaaagtcaaa 40525793  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    ||||||   ||||||| ||||||||  || ||||| ||| || | ||||||||||||||||   ||||||||||||    
T  40525794 tgattaatatttgcaggggcagattggaatgattagtaatttcagggacgaaaattcaaataacctatatttacag 40525869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20096207 - 20096382
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||| ||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||        | || | |||||||||| ||||    
T  20096207 aagcaaaccacctctcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggaccaaaattcaa 20096306  T
Q  100 atgattatat---tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||| ||   ||||||  ||||||||  |||||||| |||||| | |||||||||||||||||| ||||||||    
T  20096307 atgattaaatatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatattt 20096382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 38619906 - 38619805
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacct 188  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||| |||||| | ||||||||||||||||| ||||||||| || |||||||| ||||    
T  38619906 caaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaagacct 38619807  T
Q  189 at 190  Q
    ||    
T  38619806 at 38619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 40422358 - 40422161
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||||||||||||| | ||||||||| |||| |||||| |||||| ||||||||||||||||| ||||||        | || | |||||||||||||||    
T  40422358 aagccaaccacctctcccaatcatcaattgcaacatgggcaccacgtcgctaatgacagcccatctcagcaaaaaaaacctaattaggaccaaaagtcaa 40422259  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||   ||||||||||||||||  |||||||| | |||| |  |||||||||||| |||  |||||||| || | |||||| ||||||||||||    
T  40422258 atgattaatatttgcagtggcagattggaaggattagttacttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaagc 40422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 11478254 - 11478141
Alignment:
Q  89 ccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacc 187  Q
    ||||||||||||||||||   ||||||| |||||||| ||||||||| |||||| | |||||||||||||||||  |||||||| || | ||||||||||    
T  11478254 ccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacc 11478155  T
Q  188 tatttaagcattta 201  Q
    ||||||||| ||||    
T  11478154 tatttaagccttta 11478141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 41801996 - 41801818
Alignment:
Q  18 caatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattttgcagt 117  Q
    ||||||||||||||||| ||| |||||| |||||||| |||||||||||||||       | || | | || |||||||||||||||||   |||||||     
T  41801996 caatcatcacttgccacgtgggcaccacgtcgctaataacagcccacctcagcaaaaaaacctaattatgatcaaaagtcaaatgattaatatttgcagg 41801897  T
Q  118 ggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||||||||  |||||||| |||||| | | |||||||||||||||  |||||||| || | ||||||||| ||||||||    
T  41801896 ggcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaag 41801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 547706 - 547818
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   |||| |||||||||||  |||||||| |||||||| ||||||||||||||||| ||||||||| || | ||||||    
T  547706 aggaccaaaagtcaaatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaaa 547805  T
Q  184 aacctatttaagc 196  Q
     | ||||||||||    
T  547806 gatctatttaagc 547818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 7666 - 7776
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaa 185  Q
    ||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| |||||||||||||||||||| |||||||| || | |||||| |    
T  7666 gaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaaga 7765  T
Q  186 cctatttaagc 196  Q
    |||||||||||    
T  7766 cctatttaagc 7776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 29190349 - 29190186
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattata 108  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||||          || | ||||||||||||||||||||||      
T  29190349 cacctcgctcaatcatcacttgccacatgggcaccacgtcgctaatggcaacccacctcaggaaaaaaatctaattaggaccaaaagtcaaatgattaat 29190250  T
Q  109 ttttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
     ||||||| |  |||||  |||||||| |||||| |  |||||||||||| |||| ||||||||    
T  29190249 atttgcagggatagattggaaggattagtaacttcagagacgaaaattcagatggcctatattt 29190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 40525620 - 40525502
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||||||||||||  |||||||| |||||| | |||||||||||||||||   ||||||| || ||||||||    
T  40525620 aggaccaaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaacgaaa 40525521  T
Q  184 aacctatttaagcatttaa 202  Q
     || ||||||||| |||||    
T  40525520 gacttatttaagcctttaa 40525502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22763782 - 22763851
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  22763782 aagccaaccacctcgcccaatcatcatttgccacatgagcaccacgtcgctaatgacagcccacctcagc 22763851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 25287905 - 25287788
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||| | ||||||||| | ||||||    
T  25287905 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaa 25287806  T
Q  184 aacctatttaagcattta 201  Q
     || ||||||||| ||||    
T  25287805 gacatatttaagccttta 25287788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 38600221 - 38600333
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||||||||| ||||||||||| ||||||||||||| | || ||||||||| |||||| | |||||||| ||||||||  |||||||| || | ||||||    
T  38600221 aggaccaaaactcaaatgattaaattttgcagtggctgtttgaaaggattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacgaaa 38600320  T
Q  184 aacctatttaagc 196  Q
      |||||||||||    
T  38600321 tgcctatttaagc 38600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7590 - 7521
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||| ||||||||||| ||||||||||||||||||||  |||||| ||||||||||||| |||| |||||    
T  7590 aagcaaaccacctcgcccaatcatcacttgccacatgagcaccacgtcgctaatgacagtccacttcagc 7521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24529863 - 24529932
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||| ||| | | ||||||||||||||||||||| |||||| || |||||||||||||||||||||    
T  24529863 aagccaactaccacacccaatcatcacttgccacatgggcaccacgtcactaatgacagcccacctcagc 24529932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 31689997 - 31689896
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||||||||| |||  |||||||  |||||| ||||||||||||||||||||||||||||| || | || ||| ||||||||||    
T  31689997 tcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatggtctatatttgcagggacaaaagacctatttaa 31689898  T
Q  195 gc 196  Q
    ||    
T  31689897 gc 31689896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41251310 - 41251367
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgaca 58  Q
    |||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  41251310 aagcaaaccacctcgctcaatcatcacttgccatatgggcaccacgtcgctaatgaca 41251367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 41251399 - 41251484
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||   ||||||| || ||||| ||| ||||| |||||| ||||||| ||||||||||||| |||||||    
T  41251399 gaccaaaagtcaaatgattaatatttgcaggggtagattgaaatgattagtaacttcatggacggaaattcaaatggtttatattt 41251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 15716068 - 15716005
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcag 69  Q
    ||||||||||||||||||||||||||||||||  |||||| | ||||||||| | |||||||||    
T  15716068 aaccacctcgctcaatcatcacttgccacatgagcaccacgtagctaatgacggtccacctcag 15716005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23514208 - 23514275
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctca 68  Q
    ||||||| || ||| | |||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  23514208 aagccaatcatctcacccaatcatcacttgccacatggacaccacgtggctaatgacagtccacctca 23514275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 31690086 - 31690257
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca-tagtcaggaccaaaagtcaaatga 103  Q
    ||||||| |||| ||||||||||||||||||||| || ||| || ||||||||| |||||||||||        | ||   | |||||||||| ||||||    
T  31690086 caaccacttcgcccaatcatcacttgccacatgggcatcacgtcactaatgacaacccacctcagcaaaaaaaaactaactatgaccaaaagttaaatga 31690185  T
Q  104 ttatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    |||   ||||||||||||||||  || ||||| |||||| | |||||||||||| ||||  ||||||||||||    
T  31690186 ttaatatttgcagtggcagattggaatgattagtaacttcagggacgaaaattc-aatgacctatatttacag 31690257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 29190430 - 29190540
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||| ||||||||||||||||   ||||||| ||||||||  |||||||| |||||| |  ||  |||||||||||||||||||||| || | ||||||    
T  29190430 aggactaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaa 29190529  T
Q  184 aacctatttaa 194  Q
     ||||||||||    
T  29190530 gacctatttaa 29190540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 547632 - 547567
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacct 66  Q
    |||| ||||||||||| ||||||||||||| ||||||| || ||| |||||||||||| |||||||    
T  547632 aagcaaaccacctcgcccaatcatcacttgtcacatgggcatcacgtcgctaatgacaacccacct 547567  T

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Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 36623624 - 36623741
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  ||| |||| ||| || | |||||||||||||||||| |||||||| || | ||||||    
T  36623624 aggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 36623723  T
Q  184 aacctatttaagcattta 201  Q
     || ||||||||| ||||    
T  36623724 gacatatttaagccttta 36623741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 40422442 - 40422543
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   ||||||||||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | | |||| ||||||||||    
T  40422442 tcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 40422541  T
Q  195 gc 196  Q
    ||    
T  40422542 gc 40422543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 22763697 - 22763593
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||   |||| ||||| |||||| || ||||| |||||| | |||||||||||||||||  |||||||| | || |||||| ||||||||||    
T  22763697 tcaaatgattaatatttgtagtggtagattagaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacgaaatacctatttaa 22763598  T
Q  195 gcatt 199  Q
    |||||    
T  22763597 gcatt 22763593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 25287984 - 25288048
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    ||||||||||| ||||||||||||||||| |||  ||||| || ||||||||||||||| |||||    
T  25287984 aaccacctcgcccaatcatcacttgccacttgggtaccacgtcactaatgacagcccacttcagc 25288048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 43866824 - 43866712
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  ||| |||| ||| || | |||||||||||||||||| |||||||| || | ||||||    
T  43866824 aggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 43866725  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  43866724 gacatatttaagc 43866712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 547543 - 547456
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||| |||||||||   ||||||| ||||||||  |||||||| |||||| | |||| |||||| |||||| ||||||||    
T  547543 aggaccaaaagtgaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatggcctatattt 547456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 37713798 - 37713699
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||| ||| ||||| |||| ||||||||||| |||||||||||||||||||   |||||||| | | |||||| ||||||||||    
T  37713798 tcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatgacttatatttatagggacgaaagacctatttaa 37713699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 20096133 - 20096023
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | |||| ||||||||||||   ||||||| || | ||||||    
T  20096133 aggaccaaaagtcaaatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatgacatatatttgcagggacgaaa 20096034  T
Q  184 aacctatttaa 194  Q
     ||||||||||    
T  20096033 gacctatttaa 20096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 9632574 - 9632686
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||||||||| ||| |||| || ||||| ||||| || |||  |||||||| |||||| | |||||||||||||||||  |||||||| || | || |||    
T  9632574 aggaccaaaactcagatgactaaattttacagtgacacattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacaaaa 9632673  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  9632674 gacctatttaagc 9632686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23424625 - 23424513
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||| |||||||||||||||||   ||||||| ||||||||   || |||| |||||| | |||| ||||||||||||  ||||||||||| | | ||||    
T  23424625 aggatcaaaagtcaaatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatgacctatatttacagggatgaaa 23424526  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  23424525 gacctatttaagc 23424513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 24529952 - 24530039
Alignment:
Q  110 tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||||||||||   |||||||| |||||| |   |||||||||||||||  |||||||| || |||||||| ||||||||||||    
T  24529952 tttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 24530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 37343053 - 37343140
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| |||| |||  ||| |||| ||| || | |||||||||||||||||  ||||||||    
T  37343053 aggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctatattt 37343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 22763869 - 22763951
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctata 169  Q
    ||||||||||||||||||||   ||| || || ||||||  |||||||| |||||| |  |||||||||||||||||| ||||    
T  22763869 gaccaaaagtcaaatgattaatatttacaatgacagattggaaggattagtaacttcagagacgaaaattcaaatggtttata 22763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 23514145 - 23514211
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||| || ||| |||||||||||||||||| ||||||||||||| | |||||| | ||||||||||    
T  23514145 gattagtagcttcatggacgaaaattcaaatagtctatatttacagggacgaaagaactatttaagc 23514211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13566601 - 13566666
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||  |||||||||||||   ||||  |||||| || |||||||||||||||||||||    
T  13566601 caaccacctcggccaatcatcacttgtgtcatgagcaccacgtcactaatgacagcccacctcagc 13566666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 23514123 - 23514022
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaa 194  Q
    |||||||||||   |||||| ||||| | | ||||||||| |||||||| || ||||||||||||||  || ||||| |||| |||||| || |||||||    
T  23514123 tcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttaaggtcgaaaattcaaatgaactttatttgcagagacgaaagacttatttaa 23514024  T
Q  195 gc 196  Q
    ||    
T  23514023 gc 23514022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 26739830 - 26739753
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||| ||||||||||||   ||||||| | || ||| ||||||||| ||| || | |||||||||||||||||    
T  26739830 aggaccaaacgtcaaatgattaatatttgcagggacatattgaaaggattagtaatttcagggacgaaaattcaaatg 26739753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 31690019 - 31690084
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||||| |||||| | |||||||||||||||||  |||||||| || | ||||||||||||||||||    
T  31690019 gattagtaacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatttaag 31690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8287119 - 8287316
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnn-catagtcaggaccaaaagtcaa 99  Q
    ||||||||| |||||| |||||||| |||||||||||| |||||| | ||||||||||||||||||||||        | || |||||||||||||||||    
T  8287119 aagccaaccgcctcgcccaatcatcccttgccacatgggcaccacgttgctaatgacagcccacctcagcaaaaaaaacctaatcaggaccaaaagtcaa 8287218  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||| ||||||||||||||||||  |||||||| |||||| | |||||||||||||||||| |||||||| || | |||||| ||||||||||||    
T  8287219 atgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 8287316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22249930 - 22249734
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||||  ||||||||||||||||||||| |       | || | ||||||||||||||||    
T  22249930 aagcaaaccacctcacccaatcatcacttgccacatgggcaccacgccgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaa 22249831  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||| || | ||||||||| |||||||||    
T  22249830 tgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaaaaacatatttaagc 22249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 47862339 - 47862534
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| |||||||||||||||||||||  ||||| || ||||||||| |||||||||||         || | ||||||||||||||||    
T  47862339 aagcaaaccacctcgcccaatcatcacttgccacatgggtaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 47862438  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||||||| |||||| || |||||||||    
T  47862439 tgattaatatttgcaggggcaaattagaaggattagtaacttcatggacgaaaattcaaatggcctatatttacaggacgaaagacatatttaagc 47862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 20086626 - 20086438
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattata 108  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||| |       | || | ||||| ||||||||||||||||      
T  20086626 cacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaacctaattaggactaaaagtcaaatgattaat 20086527  T
Q  109 ttttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagc 196  Q
     ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  ||||||||| ||| |||||| || |||||||||    
T  20086526 atttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttatagagacgaaagacatatttaagc 20086438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 37678045 - 37677849
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||  | ||||||| ||||||||| |||       | || | | ||||||||||||||    
T  37678045 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacgccactaatgatagcccaccttagcaaaaaaacctaattatgaccaaaagtcaaa 37677946  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||| |||||||||||||||||   |||||||| |||||| | |||||||||||||||||  |||||||| || | | |||| ||||||||||||    
T  37677945 tgattaaattttgcagtggcagatcggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagc 37677849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 53559574 - 53559770
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||||| |||       | || | ||||||||||||||||    
T  53559574 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcactaatgacagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaa 53559673  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||||||||  || ||||| |||||| | |||||||||||||||||| |||||||| || | |||||| || |||||||||    
T  53559674 tgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 53559770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19916853 - 19916682
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| || |||       | || | ||||||||||||||||    
T  19916853 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaatgacaacccaacttagcaaaaaaacctaattaggaccaaaagtcaaa 19916754  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||||||||||||  |||||||| |||||| | || |||||||| |||||  ||||||||    
T  19916753 tgattaatatttgcagtggcagattggaaggattagtaacttcaggggcgaaaatttaaatgacctatattt 19916682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12691593 - 12691763
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||       | || | ||||||||||||||||    
T  12691593 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaac-taattaggaccaaaagtcaaa 12691691  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||| ||| ||||  |||||||| |||||| | |||| ||||||||||||  ||||||||    
T  12691692 tgattaatatttgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatgacctatattt 12691763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 13872263 - 13872106
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatga 103  Q
    |||||||| || | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||         || | |||||||||||||||||||    
T  13872263 ccaaccacttcacccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatga 13872164  T
Q  104 ttatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |||   ||||||  |||| |||  ||||||||||||||| ||||||||||||||||||    
T  13872163 ttagtatttgcaagggcatattggaaggattaataacttcatggacgaaaattcaaat 13872106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 50246054 - 50245879
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||||||| | ||||| |||||| ||||||||||||| |||||| |||       | || | | ||| ||||||||||    
T  50246054 aagccaaccacctcgcccaatcatcacttgtcgcatgggcaccacgtcgctaatgacagtccaccttagcgaaaaaacctaattaagactaaaagtcaaa 50245955  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    ||||||   ||||||||||||||||  || ||||| |||||| ||||| |||||||||||||  ||||||||||||    
T  50245954 tgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatgacctatatttacag 50245879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 54961618 - 54961789
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||||| || ||||||||||||||||||||| |||||| |||||||||||| ||||||||| |       | || | |||| |||||||||||    
T  54961618 aagcaaaccacctagcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaacctaattaggagcaaaagtcaaa 54961717  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||| | | |||||||| ||||||||| |||||| | |||| ||||||||||||  ||||||||    
T  54961718 tgattaatatttacgggggcagattgaaaggattagtaacttcagggactaaaattcaaatgacctatattt 54961789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 33294331 - 33294501
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||||||||  |||||||||||||||||||| |||||| |||| ||||||||||||||||||          || | |||||||||| |||||    
T  33294331 aagcaaaccacctcgcctaatcatcacttgccacatgggcaccacgtcgc-aatgacagcccacctcagtaaaaaaatctaattaggaccaaaaatcaaa 33294429  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||| |||||||   |||||||| |||||| | |||||||||||||||| | ||||||||    
T  33294430 tgattaatatttgcaggggcagatcggaaggattagtaacttcagggacgaaaattcaaattgcctatattt 33294501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35730858 - 35730789
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  35730858 aagccaaccacctcacccaatcatcacttgccacatggacaccacgtcgctaatgacagtccatctcagc 35730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 54961539 - 54961432
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacct 188  Q
    |||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | ||||||||||||||||||||||||||| || | |||||| ||||    
T  54961539 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacct 54961440  T
Q  189 atttaagc 196  Q
    ||||||||    
T  54961439 atttaagc 54961432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 12691519 - 12691407
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   |||| || | ||||||  |||||||| |||||| | |||||||||||||||||| |||||||| || | ||||||    
T  12691519 aggaccaaaagtcaaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaa 12691420  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  12691419 gacctatttaagc 12691407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 34238581 - 34238474
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaa 185  Q
    ||||||||||||||||||||   ||||||| |||| ||| ||||||||| |||||| |  ||||||||||||||| | |||||||||| || |||||| |    
T  34238581 gaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaatagcctatatttacaaggacgaaaga 34238482  T
Q  186 cctattta 193  Q
    ||||||||    
T  34238481 cctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 489380 - 489311
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||| | |||||||||||||||| |||| |||||| ||||||| |||| |||||||||||    
T  489380 aagccaaccacctcacccaatcatcacttgccaaatgggcaccacgtcgctaacgacaacccacctcagc 489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 515172 - 515103
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||| | |||||||||||||||| |||| |||||| ||||||| |||| |||||||||||    
T  515172 aagccaaccacctcacccaatcatcacttgccaaatgggcaccacgtcgctaacgacaacccacctcagc 515103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 48507690 - 48507775
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||||||||||| ||||||  ||||||||||  |||||||| |||||| |  ||||||||||||||||  ||||||||    
T  48507690 gaccaaaagtcaaatgattaaattttgttgtggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatattt 48507775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 47981907 - 47982019
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||||||||| |||||||||||   ||||||| ||||||||  |||||||| |||||| |  ||||||||||||||| |||||||||| || | ||||||    
T  47981907 aggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaaa 47982006  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  47982007 gacatatttaagc 47982019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27813235 - 27813302
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctca 68  Q
    ||||||||||||| || || |||||||||||||||||| |||||| |||||||||||||  |||||||    
T  27813235 aagccaaccaccttgcccagtcatcacttgccacatgggcaccacgtcgctaatgacagttcacctca 27813302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 37678130 - 37678233
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   ||||||||||||||||  |||||||| |||||| | ||||||||||| ||||||  ||||||| || | |||||| ||||||||||    
T  37678130 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatggcttatatttgcagggacgaaagacctatttaa 37678229  T
Q  195 gcat 198  Q
    ||||    
T  37678230 gcat 37678233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 47980798 - 47980687
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||| |||||||||||||||||   ||||||| |  |||||  |||||| | |||||| | ||||||||||||||||||||||||||| || | ||||||    
T  47980798 aggatcaaaagtcaaatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaa 47980699  T
Q  184 aacctatttaag 195  Q
     |||||||||||    
T  47980698 gacctatttaag 47980687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 19916938 - 19917039
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||||||||||||| ||| ||||| |||||| |  |||||||||| |||||  |||||||| || | |||||||||||||||||    
T  19916938 tcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaaaaacctatttaa 19917037  T
Q  195 gc 196  Q
    ||    
T  19917038 gc 19917039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 13872340 - 13872452
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  ||| |||| |||||| | |||| ||||||||||| | |||||||| || | ||||||    
T  13872340 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaatagactatatttgcagggacgaaa 13872439  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  13872440 gacatatttaagc 13872452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 27813326 - 27813402
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatgg 163  Q
    ||||||||||||| | |||| ||||||||||||||||||  |||||||| |||||| | || || ||||||||||||    
T  27813326 gaccaaaagtcaagtaattaaattttgcagtggcagattggaaggattagtaacttcaggggcggaaattcaaatgg 27813402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 50246140 - 50246216
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||   ||||||||| ||||||  |||||||| |||||| |||||||||||||||||||  ||||||||    
T  50246140 tcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatgacctatattt 50246216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 34238665 - 34238718
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagccca 63  Q
    |||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||    
T  34238665 cacctcgcccaatcatcacttgccacatgg-caccacgccgctaatgacagccca 34238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 20086708 - 20086825
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattta-cagaacgaaa 183  Q
    ||||| ||||||||||||||||   ||||||  | ||||||||||||||||||||||| |  ||  ||| |||||||| | ||||||||  || ||||||    
T  20086708 aggacaaaaagtcaaatgattaatatttgcaaagccagattaaaaggattaataacttcagagataaaatttcaaatgttttatatttagaaggacgaaa 20086807  T
Q  184 aacctatttaagcattta 201  Q
     || ||||||||||||||    
T  20086808 gacttatttaagcattta 20086825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 26601347 - 26601424
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||||||||||||   ||||||  |||| |||  || ||||| |||||| |||||||||||||||||||    
T  26601347 aggaccaaaagtcaaatgattaatatttgcatgggcatattggaatgattagtaacttcatggacgaaaattcaaatg 26601424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 32846464 - 32846363
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||| ||||| | |  ||||||||||||||| | | |||||||||||||||| |||||||| | || |||||| ||||||||||    
T  32846464 tcaaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaagacctatttaa 32846365  T
Q  195 gc 196  Q
    ||    
T  32846364 gc 32846363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 47862265 - 47862188
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||| ||||||||||||||||   ||||||| ||||||||  |||||||| |||||| |  ||||||||||||||||    
T  47862265 aggacaaaaagtcaaatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatg 47862188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 53559500 - 53559443
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactt 142  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||||||||||    
T  53559500 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattaataactt 53559443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 22250004 - 22250116
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||| ||||||||||||||||   ||||||| |||| |||  ||| |||| ||| || | |||||||||||||||||| |||||||| || | ||||||    
T  22250004 aggactaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 22250103  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  22250104 gacatatttaagc 22250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 32846501 - 32846549
Alignment:
Q  146 ggacgaaaattcaaatggtctatatttacagaacgaaaaacctatttaa 194  Q
    |||||||||||||||||||| |||||| || ||||||| ||||||||||    
T  32846501 ggacgaaaattcaaatggtcgatatttgcaaaacgaaagacctatttaa 32846549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 47980880 - 47980928
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgac 57  Q
    |||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  47980880 cacctcgcccaatcatcacttgccacataggcaccacgtcgctaatgac 47980928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 53475944 - 53475857
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||| |||| |||||||||||   ||||||  ||||  || ||||||||| |||||||| ||| ||||| |||||||||||||||||    
T  53475944 aggactaaaactcaaatgattaatatttgcaagggcaatttgaaaggattagtaactttagggatgaaaactcaaatggtctatattt 53475857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 8287056 - 8287122
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||| |||||| | |||||||||||||||||  |||||||| || |||||||| ||||||||||||    
T  8287056 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 8287122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 33294255 - 33294181
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |||||||||| |||||||||   ||||||| |||| |||  |||||||| |||||| |||||| |||||||||||    
T  33294255 gaccaaaagttaaatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaat 33294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 1066336 - 1066161
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnn-catagtcaggaccaaaagtcaa 99  Q
    |||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||        | || | |||||||||| ||||    
T  1066336 aagccaaccacctcgcccaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggaccaaaattcaa 1066237  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca 175  Q
    || |||| ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||  |||||||||||    
T  1066236 attattaaattttgcagtgacagattgaaaggattaataactttaaggacgaaaattcaaatgacctatatttaca 1066161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 3586408 - 3586213
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||||||||||||  ||||||||||| |||||||| |||||| ||||||||||||| |||||| |||       | || | | ||||| ||||||||    
T  3586408 aagccaaccacctcgcctaatcatcacttaccacatgggcaccacgtcgctaatgacagtccaccttagcgaaaaaacctaattaagaccagaagtcaaa 3586309  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaaacctatttaagc 196  Q
    |||||| ||||||||||||||||||  ||||||||  |||||||  ||||||||||||||||  |||||||| ||| |||||| ||||||||||||    
T  3586308 tgattaaattttgcagtggcagatttgaaggattagcaactttagagacgaaaattcaaatgacctatatttgcaggacgaaagacctatttaagc 3586213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 195
Target Start/End: Original strand, 7612739 - 7612931
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc--nnnnnnncatagtcaggaccaaaagtcaaatga 103  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||         | || | | |||||||||||||||||    
T  7612739 aaccacctcgcccaatcatcacttgccacatggacaccacgtcgctaatgacagcccacctcagcaaaaaaaaacctaattatgaccaaaagtcaaatga 7612838  T
Q  104 ttatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||| ||||||||||||||||||  || ||||  ||| || | |||||||||||||||| |  |||||||||| | |||||| |||||||||||    
T  7612839 ttaaattttgcagtggcagattggaaagattggtaatttcagggacgaaaattcaaatagcttatatttacaggcacgaaagacctatttaag 7612931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21880561 - 21880365
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||       | || | || |||||||||||||    
T  21880561 aagcaaaccaccacgcccaatcatcacttgccacatgggcaccacgtcggtaatgacagcccacctcagcaaaaaaacctaattagtaccaaaagtcaaa 21880462  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||||||||| |||||| |  ||||||||||||||||   |||||||||| |||||||| || |||||||||    
T  21880461 tgattaatatttgcaggggcagattgaaaggattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaaagacatatttaagc 21880365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 13480395 - 13480591
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||||  || ||||||||||||||||||||| |||||| ||||||||||||||||||||||||         || | ||||||||||||||||    
T  13480395 aagcaaaccaccaagcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 13480494  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaagc 196  Q
    ||||||   |||| || ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||||| || |||||| || |||||||||    
T  13480495 tgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagc 13480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 20561124 - 20560929
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||  || ||||||||||        ||| | ||||||||||||||||    
T  20561124 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccaaatcgctaatggaagtccacctcagcaaaaaat-ataattaggaccaaaagtcaaa 20561026  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||| |||||||||||  | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  20561025 tgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 20560929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 5064527 - 5064336
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||         || | |||||||||||||||||||||    
T  5064527 aaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgatt 5064428  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |   ||||||| |||| |||   ||||||| |||||| | |||||||||||||||||   |||||||||| | |||||| || |||||||||    
T  5064427 aatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaagc 5064336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 23291931 - 23292127
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||       | || | |||| |||||||||||    
T  23291931 aagcaaaccacctctctcaatcatcacttgccacatgggcaccacgtcgctaatgacagctcacttcagcaaaaaaacctaattaggatcaaaagtcaaa 23292030  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |  |||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  23292031 tgattaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaagc 23292127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 32337751 - 32337949
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca---tagtcaggaccaaaagtc 97  Q
    |||| ||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||||||||        |   || | ||||| |||||||    
T  32337751 aagcaaaccacctcgtccaatcatcacttgccacatgggcaccacattgctaatgacagcccacctcagcaaaaaaaaaatctaattaggacgaaaagtc 32337850  T
Q  98 aaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaaacctatttaagc 196  Q
    |||||||||   ||||||| |||| |||  |||||| | |||||| | |||||||||||||||||  |||||||| ||| |||||| || |||||||||    
T  32337851 aaatgattaatatttgcaggggcatattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcaggacgaaagacatatttaagc 32337949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 22494072 - 22494238
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    |||||||||| |||||||||||||||||||||| |||||  | ||||||||||| ||||||||||       |  | | |||||||||||||||||||||    
T  22494072 aaccacctcgttcaatcatcacttgccacatgggcaccatgttgctaatgacagtccacctcagcaaaaaaacccaattaggaccaaaagtcaaatgatt 22494171  T
Q  106 -atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
     ||| ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  ||||||||    
T  22494172 gata-tttgcaggggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatattt 22494238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 26503625 - 26503737
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||   ||||||| || | ||||||    
T  26503625 aggaccaaaagtcaaatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatgacttatatttgcagggacgaaa 26503724  T
Q  184 aacctatttaagc 196  Q
    |||||||||||||    
T  26503725 aacctatttaagc 26503737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 20774354 - 20774464
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaa 185  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||| |||||| |  ||||||||| ||||||  |||||||| |||| |||||| |    
T  20774354 gaccaaaagtcaaatgattaaattttgcagtggcagattgaaagaattagtaacttcagagacgaaaatacaaatgacctatatttgcagagacgaaaga 20774453  T
Q  186 cctatttaagc 196  Q
    |||||||||||    
T  20774454 cctatttaagc 20774464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15819676 - 15819873
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||||||||| ||| | ||||||||||||||||||||| ||| || ||||||||||||||||||||||||          || | |||||||||||||||    
T  15819676 aagccaaccatctcacccaatcatcacttgccacatgggcactacgtcgctaatgacagcccacctcagcaaaaaaaatctaattaggaccaaaagtcaa 15819775  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||   ||||||  || |||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  15819776 atgattagtatttgcaagggtagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 15819873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 3299756 - 3299560
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||| |||||||  ||||||||||||| ||||||| |||||| | |||||||||||||||||||  |       | || | |||| ||||||| |||    
T  3299756 aagccaatcacctcgtccaatcatcacttgtcacatgggcaccacgttgctaatgacagcccacctcgacaaaaaaacctaattaggatcaaaagtgaaa 3299657  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagc 196  Q
    ||||||   |||||| ||||| |||  || ||||| |||||| |||||||||||||||||||   ||||||| |||| |||||| ||||||||||||    
T  3299656 tgattaatatttgcaatggcaaattggaatgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaagc 3299560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 20561198 - 20561307
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaa 184  Q
    ||||||||||||||||||||||   ||||||| ||||||||  ||||||||||||| | | |||||||||||||||||   ||||||||||  ||||||     
T  20561198 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacatcaaggacgaaaattcaaatgacatatatttacaagacgaaag 20561297  T
Q  185 acctatttaa 194  Q
    ||||||||||    
T  20561298 acctatttaa 20561307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31879644 - 31879713
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||  |||||||||||||||||||||||    
T  31879644 aagccaaccacctcgcccaatcatcacttggcacatgggcaccacgccgctaatgacagcccacctcagc 31879713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 13480321 - 13480209
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||| |||||||| || | ||||||    
T  13480321 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 13480222  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  13480221 gacatatttaagc 13480209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 5064606 - 5064716
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||| | | |||||||||||||||||| |||||||| |||| ||||||    
T  5064606 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaa 5064705  T
Q  184 aacctatttaa 194  Q
     || |||||||    
T  5064706 gacatatttaa 5064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 32337673 - 32337567
Alignment:
Q  89 ccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacc 187  Q
    ||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | ||||||||||||||||||||||||||| || | |||||| |||    
T  32337673 ccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacc 32337574  T
Q  188 tatttaa 194  Q
    |||||||    
T  32337573 tatttaa 32337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26542804 - 26542873
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||||||| || | || ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  26542804 aagccaacaactttgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 26542873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 23291857 - 23291770
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | ||| |||||||||||||| ||||||||    
T  23291857 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatattt 23291770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 9607592 - 9607674
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||||||||   ||||||| |||| |||| |||||||| |||||| |||||||||||||||||||  ||||||||    
T  9607592 caaaagtcaaatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatgacctatattt 9607674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 737968 - 738080
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||    ||| || ||||||||  |||||||| |||||| |||||||||||||||||||  |||||||| || | ||||||    
T  737968 aggaccaaaagtcaaatgattaatacttgaaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaa 738067  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  738068 gacatatttaagc 738080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 31393378 - 31393530
Alignment:
Q  10 acctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaaatgattata 108  Q
    ||||||| ||||||||||||||||||||  | |||  ||||||||||||||||||||||||         | | | |||||||||||||||||||||| |    
T  31393378 acctcgcccaatcatcacttgccacatgagcgccatgtcgctaatgacagcccacctcagcaaaaaaaaaaaaattaggaccaaaagtcaaatgattaaa 31393477  T
Q  109 ttttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |||||| |||||| |||  ||| |||| |||||| ||| | ||||||| ||||    
T  31393478 ttttgcggtggcatattggaagaattagtaacttcatgaatgaaaattgaaat 31393530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 16704610 - 16704692
Alignment:
Q  115 agtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||||||  |||||||| |||||| | |||||||||||||||||| |||||||| || | |||||| ||||||||||||    
T  16704610 agtggcagattggaaggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagc 16704692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 20994929 - 20994820
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaa 185  Q
    |||||||||| |||||||||   ||||||| ||||||||| |||||||| |||||| |  ||||||||||||||||  ||||||||||| | |||||| |    
T  20994929 gaccaaaagttaaatgattaatatttgcag-ggcagattagaaggattagtaacttcagagacgaaaattcaaatgaactatatttacagggacgaaaga 20994831  T
Q  186 cctatttaagc 196  Q
    | |||||||||    
T  20994830 catatttaagc 20994820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 20994965 - 20995074
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaac 186  Q
    |||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | ||| |||||||||||||   | ||||| |||| |||||| ||    
T  20994965 accaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagac 20995064  T
Q  187 ctatttaagc 196  Q
    ||||||||||    
T  20995065 ctatttaagc 20995074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 1066457 - 1066521
Alignment:
Q  132 attaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaaacctatttaagc 196  Q
    |||| |||||| | ||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  1066457 attagtaacttcagggacgaaaattcaaatgatctatatttacaagatgaaaaacctatttaagc 1066521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 22493993 - 22493907
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| || ||||| ||| ||||| |||||| | |||||||||||||||||  ||||||||    
T  22493993 aggaccaaaagtcaaatgattaatatttgcag-ggtagattgaaaagattagtaacttcagggacgaaaattcaaatgacctatattt 22493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 26542719 - 26542652
Alignment:
Q  96 tcaaatgattatat-tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||| || |||||||||||||||| ||| ||||| |||||| | |||||||||||||||||    
T  26542719 tcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattcaaatg 26542652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 7612619 - 7612549
Alignment:
Q  127 aaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||| |||| |||||| | ||||||||||||||||||||||||||| || | |||||| ||||||||||||    
T  7612619 aaagaattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagc 7612549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 26542741 - 26542807
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagc 196  Q
    ||||| |||||| | ||||||||||||||||| ||||||||| |||| |||||| ||||||||||||    
T  26542741 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaagc 26542807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 3299841 - 3299942
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||| |||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| || |||||||    
T  3299841 tcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaa 3299940  T
Q  195 gc 196  Q
    ||    
T  3299941 gc 3299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 30234868 - 30234938
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaa 160  Q
    |||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | ||| |||||||||||    
T  30234868 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaa 30234938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 31879731 - 31879816
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||||||||||| ||||||||||  ||||||  ||  |||| |||||| | ||| | |||||||||||  ||||||||    
T  31879731 gaccaaaagtcaaatgattaaattttgcagtaacagattggaattattagtaacttcagggatgcaaattcaaatgacctatattt 31879816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 18865208 - 18865156
Alignment:
Q  110 tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||  ||  |||||||| ||||||||| ||||||||||||||||    
T  18865208 tttgcagtggcaatttggaaggattagtaactttatagacgaaaattcaaatg 18865156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 21880635 - 21880711
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |||||||||||||||||| |||   ||||||| |  |||||  |||||||| |||||| | ||||||||||||||||    
T  21880635 aggaccaaaagtcaaatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaat 21880711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 26542891 - 26543003
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||| ||||| |||| |||  |||| |||||| |  |||||||| |||||||  |||||||| || | ||||||    
T  26542891 aggaccaaaagtcaaatgattaatatttgcggtggccgattgaaattattagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaa 26542990  T
Q  184 aacctatttaagc 196  Q
     ||||| ||||||    
T  26542991 gacctaattaagc 26543003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 9e-40; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10998060 - 10998260
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||         || | | ||||||||||||||    
T  10998060 aagcaaaccacctcgctgaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatttaattatgaccaaaagtcaaa 10998159  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagcatt 199  Q
    ||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| |||| ||||||||| ||||||||||||    
T  10998160 tgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaaaaacatatttaagcatt 10998259  T
Q  200 t 200  Q
    |    
T  10998260 t 10998260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 194
Target Start/End: Original strand, 30890398 - 30890588
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgat 104  Q
    |||||||||||| |||||||  |||||||||||| ||||||  ||||||||||||||||||||||           | | ||||| ||||||||||||||    
T  30890398 caaccacctcgcccaatcatatcttgccacatgggcaccacgccgctaatgacagcccacctcagaaaaaaaaaccatttaggacaaaaagtcaaatgat 30890497  T
Q  105 tatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag-aacgaaaaacctatttaa 194  Q
    || |||||||||||||||||| ||| ||||| |||||| | ||| |||||||||||||  |||||||||||| ||||||| ||||||||||    
T  30890498 taaattttgcagtggcagattgaaaagattagtaacttcagggatgaaaattcaaatgacctatatttacagaaacgaaagacctatttaa 30890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28310545 - 28310384
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||| |||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||       | || | || |||||||||||||    
T  28310545 aagcccaccacctcactcaatcatcacttgccacatgggaaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattagaaccaaaagtcaaa 28310446  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||| |||||||||||| | | |  |||||||| |||||||| ||||| |||||||||||    
T  28310445 tgattaaattttgcagtggaaaactggaaggattagtaactttagggacggaaattcaaatg 28310384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 33458106 - 33458301
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca--tagtcaggaccaaaagtcaaat 101  Q
    |||||||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||||||||        |  || | |||||||||||||||||    
T  33458106 ccaaccacctcgctcaatcatcacttgcaatatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaaaacctaattaggaccaaaagtcaaat 33458205  T
Q  102 gattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||   ||||||||| ||||||| |||||||| |||||| | |||||| ||||||||||  |||||||| || | |||||| ||||||||||||    
T  33458206 gattaatatttgcagtgacagattagaaggattagtaacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaagc 33458301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 1741567 - 1741388
Alignment:
Q  18 caatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattttgcagt 117  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||       | || | ||||||||||||||||||||||   ||||||      
T  1741567 caatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaag 1741468  T
Q  118 ggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  1741467 ggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 1741388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 53037214 - 53037390
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||| |||| |||| |||||||||||||||| |||||| | ||||||| |||||||||| |||       | || | ||||||||||||||||    
T  53037214 aagcaaaccacttcgcccaattatcacttgccacatgggcaccacgttgctaatggcagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaa 53037313  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga 177  Q
    ||||||   ||||||| |||||||| ||||||| | ||||| || |||||||||||||||||  |||||||||||||    
T  53037314 tgattaatatttgcaggggcagattgaaaggatcagtaactgtagggacgaaaattcaaatgacctatatttacaga 53037390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 51279428 - 51279225
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||       | || | ||||| ||||||||||    
T  51279428 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcggcaaaaaaacctaattaggactaaaagtcaaa 51279329  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagcatt 199  Q
    ||||||   ||||||| |||| ||| ||| ||||| ||||||   ||||||||||||||||   |||||||| || | |||||| || ||||||||| ||    
T  51279328 tgattaatatttgcaggggcaaattgaaatgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcctt 51279229  T
Q  200 taaa 203  Q
    ||||    
T  51279228 taaa 51279225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 38642824 - 38642632
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatga 103  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||||       | || | |||||||||||| ||||||    
T  38642824 ccaaccacctcgcccactcatcacttgccacatgggcaccacatcgctaatgacag-ccacctcagccaaaaaacctaattaggaccaaaagtgaaatga 38642726  T
Q  104 ttatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||| |||||||||||| | |||  |||||||  |||||| | ||||  ||||| |||||   ||||||| || | |||||| ||||||||||||    
T  38642725 ttaaattttgcagtggtatattggaaggattggtaacttcagggacagaaatttaaatgacttatatttgcatggacgaaatacctatttaagc 38642632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11312932 - 11312760
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||  |||||| || ||||||||| |||||||||||         || | ||||||||||||||||    
T  11312932 aagcaaaccacctcgcccaatcatcacttgccacatgagcaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 11312833  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattta 173  Q
    ||||||   ||||||| |||||| |  |||||||  |||||| | |||||||||||||||||  |||||||||    
T  11312832 tgattaatatttgcaggggcagactgcaaggattggtaacttcagggacgaaaattcaaatgacctatattta 11312760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 40257066 - 40257220
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||| |       | || | |||| ||||||||||||||||    
T  40257066 aaccacctcgcccaatcatcacttgccacatgggcaccacgtcgc-aatgacagcccacctcaacaaaaatacctaattaggatcaaaagtcaaatgatt 40257164  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    |   ||||||| |||||||| ||| ||||| ||| || | ||||||||||||||||    
T  40257165 aatatttgcaggggcagattgaaatgattagtaatttcagggacgaaaattcaaat 40257220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 55036864 - 55037027
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattata 108  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||| || ||||||||         || | |||||||||| |||||||||||      
T  55036864 cacctcgttcaatcatcacttgccacatgggcaccacgtcgctaatgacaaccgacctcagcaaaaaaatctaattaggaccaaaaatcaaatgattaat 55036963  T
Q  109 ttttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
     ||||||| ||||||||  |||||||| |||||| | | |||||||||||||||  ||||||||    
T  55036964 atttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctatattt 55037027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10749505 - 10749574
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  10749505 aagcaaaccacctcgctcaatcatcacttgccacatggacactacgtcgctaatgacaacccacctcagc 10749574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 30804033 - 30804207
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccaca-tggacaccacatcgctaatgacagcccacct-cagcnnnnnnncatagtcaggaccaaaagtca 98  Q
    |||||||||||||||  |||||||||||||||||| ||| |||||| |||||||||||||||||||| ||         | || | ||||||||||||||    
T  30804033 aagccaaccacctcgtccaatcatcacttgccacactgggcaccacgtcgctaatgacagcccacctccaaaaaaaaaacctaattaggaccaaaagtca 30804132  T
Q  99 aatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattta 173  Q
    ||||||||   ||||||||| ||||||  |||||||| |||||| | | ||||||||||||||| | ||||||||    
T  30804133 aatgattaatatttgcagtgacagattggaaggattagtaacttcaggaacgaaaattcaaatgatatatattta 30804207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 10749431 - 10749319
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |  |||||| |||||||| |||||| | |||||||||||||||||  ||||||||||| | ||||||    
T  10749431 aggaccaaaagtcaaatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaa 10749332  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  10749331 gacctatttaagc 10749319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35432538 - 35432697
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||||||| |||| | ||||||||||||||| ||| |||||| || ||||||||| || || |||||       | || | | ||| ||||||||||    
T  35432538 aagccaaccacttcgcccgatcatcacttgccacttgggcaccacgtcactaatgacatcctacttcagcaaaaaaac-taattatgacaaaaagtcaaa 35432636  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    | ||||   ||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  35432637 taattaatatttgcagtggcagattggaaggattaataactttatgaacgaaaattcaaat 35432697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 33989102 - 33989016
Alignment:
Q  110 tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacagaacgaaaaacctatttaagc 196  Q
    ||||||||||||||||  |||||||| |||||| | | ||||||||||||| ||||||||||| ||| |||||| ||||||||||||    
T  33989102 tttgcagtggcagattggaaggattagtaacttaaggtacgaaaattcaaaaggtctatatttgcaggacgaaatacctatttaagc 33989016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21300330 - 21300261
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||| |||||| |||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  21300330 aagcaaaccacatcgtccaatcatcacttgccacatgggcaccacatcgctaatgacagtccacctcagc 21300261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24576477 - 24576544
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctca 68  Q
    ||||||||||| | || ||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  24576477 aagccaaccactttgcccaatcatcacttgccacatgggcaccacatcactaatgacaacccacctca 24576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 46670361 - 46670274
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||||||||||||| |||||||||||| |||||  |||||||| ||| || | ||||| |||||||||||  ||||||||    
T  46670361 aggaccaaaagtcaaatgattaaattttgcagtggtagattggaaggattagtaaattcaaggacggaaattcaaatgacctatattt 46670274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 11313006 - 11313082
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||||||||||||   ||||||| ||||||||| |||||||| |||||| || ||||||||||||||||    
T  11313006 aggaccaaaagtcaaatgattagtatttgcaggggcagattagaaggattagtaacttcat-gacgaaaattcaaatg 11313082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 22129193 - 22129357
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca---tagtcaggaccaaaagtc 97  Q
    |||| |||||||||||  ||| |||||||||||||||| |||||  ||||||||||||| ||||||||||        |   || | |||||||||||||    
T  22129193 aagcaaaccacctcgcctaattatcacttgccacatgggcaccatgtcgctaatgacagtccacctcagcaaaaaaaaaaactaattaggaccaaaagtc 22129292  T
Q  98 aaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||| ||||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||    
T  22129293 aaattattaatatttgcagaggcaaatttgaaggattagtaacttcagggacgaaaattcaaatg 22129357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 46670450 - 46670385
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcag 69  Q
    |||||||||| || |||||||||||||| |||||  ||||||||||||||||||| ||||||||||    
T  46670450 ccaaccaccttgcccaatcatcacttgctacatgagcaccacatcgctaatgacaacccacctcag 46670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 24576377 - 24576291
Alignment:
Q  109 ttttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    ||||||||| |||||||| |||||||| ||| || ||||||||||||||||||||  ||||||| || | |||||| ||||||||||    
T  24576377 ttttgcagttgcagattagaaggattagtaatttcatggacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33989200 - 33989262
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagccca 63  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||| ||||||| |||| ||||    
T  33989200 aagccaaccacttcgcccaatcatcacttgccacatgggcaccacgtcgctaacgacaaccca 33989262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 21255849 - 21255914
Alignment:
Q  132 attaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||| |||||||||||||||||||||||||| ||||||||| || |||||||| || |||||||||    
T  21255849 attagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaaagacttatttaagc 21255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 30654762 - 30654862
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    ||||||||||| || |||||||||||||||| |||||| | |||||| || ||||||||||||||||  |||||||| || | |||||| ||||||| ||    
T  30654762 tcaaatgatta-atattgcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagacctattaaa 30654860  T
Q  195 gc 196  Q
    ||    
T  30654861 gc 30654862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 33989290 - 33989377
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   | || |||| || |||  |||||||| |||||| ||||||||||||||||||| | |||||||    
T  33989290 aggaccaaaagtcaaatgattaatatctgtagtgacaaattggaaggattactaacttcatggacgaaaattcaaatgatatatattt 33989377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 35432475 - 35432541
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||| |||||| |||| |||||||||||||||||||||||| || | |||||| ||||||||||||    
T  35432475 gattagtaacttcatgggcgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagc 35432541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 22129119 - 22129030
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac 174  Q
    ||||| ||||||||||||||||   ||||||| |||| |||  |||||||| |||||| |  ||||||||||||||| | ||||||||||    
T  22129119 aggacgaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaatagcctatatttac 22129030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 35432458 - 35432401
Alignment:
Q  146 ggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagcatttaa 202  Q
    ||||||||||||||||||||||||||| || | |||||| |||||||||||| |||||    
T  35432458 ggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcctttaa 35432401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 40256987 - 40256911
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    ||||||||||||||||||||||   ||||||  |||| |||  |||||||| |||||| | ||||||||||||||||    
T  40256987 aggaccaaaagtcaaatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaat 40256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 33458018 - 33457919
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaa 194  Q
    |||||||||||   ||||||||| || ||||||||||||| |||||| |  | | |||||||||||| || ||||||||| | |||||| ||||||||||    
T  33458018 tcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatgatccatatttacatggacgaaagacctatttaa 33457919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 55036782 - 55036672
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||| || |||||||||   ||||||| ||||||||  |||||||| |||||| | | | |||||||||||||  |||||||| || | ||||||    
T  55036782 aggaccaaaggttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaa 55036683  T
Q  184 aacctatttaa 194  Q
     ||||||||||    
T  55036682 gacctatttaa 55036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 10749669 - 10749754
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||   ||||| | ||||||||  || ||||| |||||| | ||||||||||| |||||  ||||||||    
T  10749669 gaccaaaagtcaaatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatgacctatattt 10749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 38642990 - 38643039
Alignment:
Q  148 acgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagc 196  Q
    ||||||||||||||| ||||||||| |||| |||||| ||||||||||||    
T  38642990 acgaaaattcaaatgatctatatttgcagagacgaaacacctatttaagc 38643039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 53037097 - 53037049
Alignment:
Q  128 aaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    |||||||| |||||| | |||||||||||||||||  ||||||||||||    
T  53037097 aaggattagtaacttcagggacgaaaattcaaatgacctatatttacag 53037049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16367160 - 16366964
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||         || | ||||||||||||||||    
T  16367160 aagcaaaccacctcgctcaatcatcacttgccacatgtgcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 16367061  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  ||||||||||| | |||||| || |||||||||    
T  16367060 tgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 16366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 32519342 - 32519503
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||       | || | ||||||||||||||||    
T  32519342 aagcaaaccacctcactcaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaa 32519441  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||   ||||||| |||||||| ||||||||| |||||| | | |||||||||||||||    
T  32519442 tgattaatatttgcaggggcagattgaaaggattagtaacttcaggaacgaaaattcaaatg 32519503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 28599614 - 28599810
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||         || | ||||||||||||||||    
T  28599614 aagccaaccacctcgctcaatcatcacttgccacatgggcaccacgtcgctcatgacagcccatctcagcaaaaaaatctaattaggaccaaaagtcaaa 28599713  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||| |||||||| |||||||||  |||||||  |||||| |  ||||||||||||||||   |||||||||| | | |||| ||||||||||||    
T  28599714 tgattaaattttgcaatggcagattggaaggatttgtaacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaagc 28599810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 9693928 - 9693768
Alignment:
Q  12 ctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattt 111  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||||||       | || | |||||||||||||||||||||| | ||    
T  9693928 ctcgcccaatcatcacttgccacataggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaaactt 9693829  T
Q  112 tgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||  |||||||| |||||| |  |||||||||| |||||| ||||||||    
T  9693828 tgcagtggcagattggaaggattagtaacttcagtgacgaaaattaaaatggcctatattt 9693768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22309628 - 22309432
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |  ||||||||||||||||||||||||       | ||   | ||||||||||||||    
T  22309628 aagccaaccacctcgcccaatcatcacttgccacatgggcacgatgtcgctaatgacagcccacctcagcaaaaaaacctaaatatgaccaaaagtcaaa 22309529  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   | ||||||||||||||  |||||||| |||||| || ||| ||||||||||||  |||||||| || | |||||| ||||||||||||    
T  22309528 tgattaatatgtgcagtggcagattggaaggattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 22309432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 196
Target Start/End: Original strand, 4375741 - 4375934
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca--tagtcaggaccaaaagtcaaatga 103  Q
    |||||||||||||||||||||||||||| |||| |||||| ||| ||||| || ||||||| |||        |  || | |||||||||||||||||||    
T  4375741 aaccacctcgctcaatcatcacttgccatatgggcaccacgtcgttaatgccaacccacctaagcaaaaaaaaacctaattaggaccaaaagtcaaatga 4375840  T
Q  104 ttatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||| ||||||||||||||||||  |||||||| |||||| ||||||||||||| |||||   ||||||| || | |||||| ||||||||||||    
T  4375841 ttaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaagc 4375934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 18477104 - 18476943
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||| || || |||||||||||| |||||||| |||||  ||| ||||||||||||||||||||       | || | |||| |||||||||||    
T  18477104 aagccaaccagctagcccaatcatcacttaccacatgggcaccatgtcgttaatgacagcccacctcagcaaaaaaacctaattaggatcaaaagtcaaa 18477005  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||| ||||||||||||||||||  |||||||| |||||| | |||| ||||||||||||    
T  18477004 tgattaaattttgcagtggcagattggaaggattagtaacttcagggacaaaaattcaaatg 18476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17284922 - 17285083
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||||||||||||  |||||||||||||||||||  |||||| ||||||||||||||||||||||||         || | |||||||||||| |||    
T  17284922 aagccaaccacctcgccaaatcatcacttgccacatgtgcaccacgtcgctaatgacagcccacctcagccaaaaaatctaattaggaccaaaagttaaa 17285021  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||| ||||||  ||| || |||  |||||||| |||||| || ||||||||||||||||    
T  17285022 tgattaaattttgttgtgacatattggaaggattagtaacttcattgacgaaaattcaaatg 17285083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 41846589 - 41846418
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    ||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||||| |||| | | |       | || | | ||  ||||||||||    
T  41846589 aagccaaccacctcgccaaatcatcacttgccacatgggcaccacgtcgctaatgacagtccactttaacaaaaaaacctaattatgattaaaagtcaaa 41846490  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||||||||||||| |||||||| |||||| | |||||||||||||||||  ||||||||    
T  41846489 tgattaatatttgcagtggcagattagaaggattactaacttcagggacgaaaattcaaatgacctatattt 41846418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 37984914 - 37985075
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||| ||| |||||||||||||||||||||||  ||||| | ||||||||||||||||||||||       | || | | || |||||||||||    
T  37984914 aagccaaccatctcactcaatcatcacttgccacatgggtaccacgttgctaatgacagcccacctcagcaaaaaaacctaattaagatcaaaagtcaaa 37985013  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||| |||||||||||||| |||  |||||||| ||| || |  |||||||| |||||||    
T  37985014 tgattaaattttgcagtggcaaattggaaggattagtaatttcagagacgaaaaatcaaatg 37985075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 1150124 - 1150320
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||| |||| ||||||||||||||||||||| |||||| |||||||||  || |||||||| |         || | ||||||||||||||||    
T  1150124 aagcaaaccacgtcgcccaatcatcacttgccacatgggcaccacgtcgctaatggaagtccacctcaacaaaaaaatctaattaggaccaaaagtcaaa 1150223  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| |||||||| ||||||||| ||| || | |||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  1150224 tgattaatatttgcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagc 1150320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 17366820 - 17366964
Alignment:
Q  12 ctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgattatattt 111  Q
    ||||| ||||||||||||| || |||| |||||| |||||||||||| |||||||||||       | || | ||||||||||||||| ||||||   ||    
T  17366820 ctcgcccaatcatcacttgtcatatgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaattgattaatatt 17366919  T
Q  112 tgcagtggcagattaaaaggattaataactttatggacgaaaatt 156  Q
    ||||||||||||||  |||||||| |||||||| |||||||||||    
T  17366920 tgcagtggcagattggaaggattagtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20911317 - 20911512
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||         || | | ||||||||||||||    
T  20911317 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccatctcagcaaaaaaatctaattatgaccaaaagtcaaa 20911416  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| | ||||||  || ||||| |||||| | |||| ||||||||||||  ||||||||||| | |||||| || |||||||||    
T  20911417 tgattaatatttgcag-gacagattggaatgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 20911512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 17580520 - 17580683
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||||||||||       | || | ||||||||||||||    |||    
T  17580520 aaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtca----att 17580615  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacg-aaaattcaaatggtctatattt 172  Q
    |   |||||||||||| |||  |||||||| |||||||| ||||| ||||||||||||  ||||||||    
T  17580616 aatatttgcagtggcatattggaaggattagtaactttagggacgaaaaattcaaatgacctatattt 17580683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 17580441 - 17580329
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaa 183  Q
    |||| |||||||||||||||||   ||||||| |||| |||  |||||||||||||||   |||||||||||||||| ||||||||||||||| ||||||    
T  17580441 aggatcaaaagtcaaatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaatagtctatatttacagagacgaaa 17580342  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  17580341 gacctatttaagc 17580329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5608791 - 5608733
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacag 59  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  5608791 aagccaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaatgacag 5608733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 8089639 - 8089831
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||        | || | |||||||||||||||    
T  8089639 aagcaaaccacctcgtccaattatcacttgccacatggacaccacgtcgctaatgacagtccacctcagcaaaaaaaacctaattaggaccaaaagtcaa 8089738  T
Q  100 atgatt-atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||| ||||||    | ||||||||  |||||||| |||||| | |||| ||||| ||||||  |||||||||| ||||||||| || |||||||    
T  8089739 atgattaatattt----ggggcagattggaaggattagtaacttcagggacaaaaatgcaaatgacctatatttacaagaacgaaagacatatttaa 8089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 19607107 - 19606939
Alignment:
Q  9 cacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaaatgattat 107  Q
    |||||||  |||||||||||||||| |||| |||||| ||||||||||||||||||||| ||        | || | ||||||||||||||||||||||     
T  19607107 cacctcgtccaatcatcacttgccatatgggcaccacgtcgctaatgacagcccacctcggcaaaaaaaacttaattaggaccaaaagtcaaatgattaa 19607008  T
Q  108 attttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
      ||||||  | ||||||  |||||||| |||||| | |||||||||||||||||   |||||||||||    
T  19607007 tatttgcaacgacagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttacag 19606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 20911241 - 20911131
Alignment:
Q  87 gaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaa 185  Q
    ||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| |    
T  20911241 gaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaga 20911142  T
Q  186 cctatttaagc 196  Q
    |||||||||||    
T  20911141 cctatttaagc 20911131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 1150050 - 1149938
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||| ||||  |||||||| |||||| | |||||||||||||||||  |||||||| || | ||||||    
T  1150050 aggaccaaaagtcaaatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 1149951  T
Q  184 aacctatttaagc 196  Q
     ||||||||||||    
T  1149950 tacctatttaagc 1149938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 22731803 - 22731915
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| | |||||| |||||| || |||||| | |||||||||||||||||| |||||||| || | ||||||    
T  22731803 aggaccaaaagtcaaatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatggcctatatttgcagggacgaaa 22731902  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  22731903 gacatatttaagc 22731915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 45663779 - 45663891
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| | ||||||  |||||||| |||||| | |||||||||||||||| | ||||||||||| | ||||||    
T  45663779 aggaccaaaagtcaaatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaattgactatatttacagggacgaaa 45663878  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  45663879 gacatatttaagc 45663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 8089565 - 8089455
Alignment:
Q  85 aggaccaaaagtcaaatgatt-atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaa 182  Q
    ||||||||||||||||||||| |||||| |||| ||||||||  |||||||| |||||| |  ||||||||||||||||   ||||||| |||| |||||    
T  8089565 aggaccaaaagtcaaatgattgatattt-gcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatgacatatatttgcagagacgaa 8089467  T
Q  183 aaacctatttaa 194  Q
    ||||||||||||    
T  8089466 aaacctatttaa 8089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 16367234 - 16367321
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||| ||||||||    
T  16367234 aggaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatattt 16367321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 196
Target Start/End: Complemental strand, 9959002 - 9958827
Alignment:
Q  21 tcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca-tagtcaggaccaaaagtcaaatgattatattttgcagtgg 119  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||||        | || | | ||||||||||||| ||||||   ||||||||||    
T  9959002 tcatcacttgcgacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaactaatta-gaccaaaagtcaactgattaatatttgcagtgg 9958904  T
Q  120 cagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    | ||||  ||| ||||  ||||| || |||||||||||||||| ||||||||| || | ||| |||||||||||||||    
T  9958903 ctgattggaagcattagcaacttcattgacgaaaattcaaatgatctatatttgcagggacg-aaaacctatttaagc 9958827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43682054 - 43681988
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctca 68  Q
    |||||||||||||| | ||||||||||||||||||||| || ||| |||||||||||| |||||||||    
T  43682054 aagccaaccacctcacccaatcatcacttgccacatgg-catcacgtcgctaatgacaacccacctca 43681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 10446920 - 10446833
Alignment:
Q  110 tttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||| |||||||| || | |||||| || |||||||||    
T  10446920 tttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 10446833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 28599529 - 28599430
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||| ||||| | |  |||||||| |||||| ||||||||||||||||||| ||||||||| | || |||||| ||||||||||    
T  28599529 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaa 28599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 9959107 - 9959173
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||||||||||   |||| ||||||||||| ||||||||| |||||| |||||| ||||||||||||    
T  9959107 tcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatg 9959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 41846674 - 41846751
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattta 173  Q
    |||||||||||   ||||||||||||||||  ||||| || |||||| | | |||||||||||||||| |||||||||    
T  41846674 tcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattcaaatggcctatattta 41846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 5608700 - 5608637
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaa 153  Q
    ||||||||||||||||| ||||||||||| || |||  |||||||| |||||| | ||||||||    
T  5608700 caaaagtcaaatgattaaattttgcagtgccaaattggaaggattagtaacttcagggacgaaa 5608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 5608876 - 5608977
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||| ||||| | | ||||||||| ||||||||  || ||||||||||||| ||||||||| |  |||||||| |||| |||||    
T  5608876 tcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttagagaggaaaattcaaatgatctatatttgctggaacgaaagacctgtttaa 5608975  T
Q  195 gc 196  Q
    ||    
T  5608976 gc 5608977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 9694002 - 9693937
Alignment:
Q  131 gattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||||| |||||||| |||||||||||||||||  |||||||| || | ||||||| ||||||||||    
T  9694002 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaaatcctatttaag 9693937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 9694056 - 9694125
Alignment:
Q  128 aaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |||||||| |||||| | |||||||||||||||||  |||||||| || | |||||| ||||||||||||    
T  9694056 aaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaagc 9694125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 32519265 - 32519156
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaac 186  Q
    |||||||||||||||||||   |||||||  ||| |||  |||||||| ||| || | |||||||||||||||||  |||||||| || | |||||| ||    
T  32519265 accaaaagtcaaatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagac 32519166  T
Q  187 ctatttaagc 196  Q
     |||||||||    
T  32519165 atatttaagc 32519156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 43681968 - 43681851
Alignment:
Q  87 gaccaaaa-gtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaa 184  Q
    |||||||| ||||||||||||   |||||| ||||| | |  || ||||| ||||||||||||||||||||||||||   ||||||| || | ||||||     
T  43681968 gaccaaaaagtcaaatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaag 43681869  T
Q  185 acctatttaagcatttaa 202  Q
    || ||||||||| |||||    
T  43681868 acatatttaagcctttaa 43681851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37563551 - 37563380
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||         || | ||||||||||||||||    
T  37563551 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaa 37563452  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    ||||||   ||||||| ||||||||| |||||||| ||| || | |||||||||||||||||| ||||||||    
T  37563451 tgattaatatttgcaggggcagattagaaggattagtaaattcagggacgaaaattcaaatggcctatattt 37563380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 44545792 - 44545597
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||  |||||||||||| | |||||||||       | || | ||||||||||||||||    
T  44545792 aagccaaccacctcgctcaatcatcacttgccacatgggcaccatgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaa 44545693  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaag 195  Q
    | |||||||||||||| |||||||  |||  |||| |||||| | | |||||||||||||||  |||||||| |||| || ||| |||||||||||    
T  44545692 taattatattttgcagcggcagatcgaaataattagtaacttcaggaacgaaaattcaaatgacctatatttgcagagacaaaagacctatttaag 44545597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 43938091 - 43937895
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||         || | | ||||||||||||||    
T  43938091 aagcaaaccacctcgctcaatcatcacttgccacatgtacaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaa 43937992  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||||||||  |||||||| |||||| | ||| |||||||||||||  |||||||||| || |||||| || |||||||||    
T  43937991 tgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagc 43937895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 15827918 - 15827757
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||||||||       | || | |  |||||||||||||    
T  15827918 aagccaaccacctcgctcaatcatcacttgccacatgggcaccacgttgctaatgacagctcacctcagcaaaaaaacctaattaaaaccaaaagtcaaa 15827819  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    || |||   |||||||||||||||| |||||||||||||||| |   |||||||||||||||    
T  15827818 tggttaatatttgcagtggcagattgaaaggattaataacttcaaaaacgaaaattcaaatg 15827757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5636212 - 5636372
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||||||||| ||||||||| ||| ||||||| |||||| | |||||||||||||||||||| |       | || | ||||||||| ||||||    
T  5636212 aagccaaccacctcgcacaatcatcatttgtcacatgggcaccacgttgctaatgacagcccacctcaactaaaaaacctaattaggaccaaatgtcaaa 5636311  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaat 161  Q
    | |||| ||||||||||||||||||  |||||||| |||||| | ||||||||||||||||    
T  5636312 taattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaat 5636372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 26825827 - 26825631
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| | |||||||||         || | | ||||||||||||||    
T  26825827 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaatctaattaagaccaaaagtcaaa 26825728  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||| ||||||||  || ||||| |||||| | |||||||||||||||||  ||||||||||| | |||||| || |||||||||    
T  26825727 tgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 26825631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 47121464 - 47121662
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnn-catagtcaggaccaaaagtcaa 99  Q
    ||||||||||| |||  |||||||||| |||||||||| |||||| ||| ||||| || ||||||| |||        | || | |||||||||||||||    
T  47121464 aagccaaccacttcgtccaatcatcacctgccacatgggcaccacgtcgttaatggcaacccacctaagcaaaaataacctaattaggaccaaaagtcaa 47121563  T
Q  100 atgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagca 197  Q
    ||||||| |||||||||||| ||||| |||| |||| |||||| |  ||||||||||||||||||| |||||| || | |||||| |||||||||||||    
T  47121564 atgattaaattttgcagtggtagattgaaagtattagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaagca 47121662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 26825904 - 26826013
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaac 186  Q
    |||||||||||||||||||   ||||||| |||||||| |||||||||||||||| |||||||||||||||||||   ||||||| || |||||||| ||    
T  26825904 accaaaagtcaaatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagac 26826003  T
Q  187 ctatttaagc 196  Q
    ||||||||||    
T  26826004 ctatttaagc 26826013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 35262818 - 35262662
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgat 104  Q
    ||||||| | |||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||       | || | | || |||||||||||||||    
T  35262818 caaccacattgctcaatcatcacttgccacatgggcaccatatcgctaataacaacccacctcagcaaaaaaac-taattatgatcaaaagtcaaatgat 35262720  T
Q  105 tatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    || ||||||||||||||||||  |||||||| |||||| |  ||| ||||||||||||    
T  35262719 taaattttgcagtggcagattggaaggattagtaacttcagagacaaaaattcaaatg 35262662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 12928313 - 12928422
Alignment:
Q  88 accaaaagtcaaatgatt-atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaa 185  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||| || | || ||| |    
T  12928313 accaaaagtcaaatgattgatattt-gcagcggcagattaaaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacaaaaga 12928411  T
Q  186 cctatttaagc 196  Q
    |||||||||||    
T  12928412 cctatttaagc 12928422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 27558035 - 27558235
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca----tagtcaggaccaaaagt 96  Q
    |||||||||| ||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||        |    || | |||| |||||||    
T  27558035 aagccaaccatctcgtccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaaaactaattaggatcaaaagt 27558134  T
Q  97 caaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||||||||||   |||||| ||||| | |  |||||||| ||||||  ||||||||||||||||||  |||||||| || | |||||| |||||||||||    
T  27558135 caaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 27558234  T
Q  196 c 196  Q
    |    
T  27558235 c 27558235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34454677 - 34454608
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  34454677 aagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 34454608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 47082041 - 47081883
Alignment:
Q  4 ccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatga 103  Q
    ||||||| ||||||||||||||| || |||||| |||||||| |||||||||||| |||||||||||       | || | | |||||||| ||||||||    
T  47082041 ccaaccaactcgctcaatcatcatttaccacattgacaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaagaccaaaaatcaaatga 47081942  T
Q  104 ttatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    |||   ||| || ||||||||| ||||||||| |||||| |  || |||||||||||||    
T  47081941 ttaatatttacaatggcagattgaaaggattagtaacttcagagatgaaaattcaaatg 47081883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23191040 - 23191165
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc-nnnnnnncatagtcaggaccaaaagtcaa 99  Q
    |||||||||||||||| ||||||||||||| ||||||| || ||| |||||||||||| ||||||| |||        | || | |||||||||||||||    
T  23191040 aagccaaccacctcgcccaatcatcacttgtcacatggtcatcacgtcgctaatgacatcccaccttagcaaaaaaaacctaattaggaccaaaagtcaa 23191139  T
Q  100 atgattatattttgcagtggcagatt 125  Q
    |||||||   ||||||||||||||||    
T  23191140 atgattaatatttgcagtggcagatt 23191165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 34454754 - 34454838
Alignment:
Q  88 accaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||||||||||   ||||||| |||||||| |||| |||| |||||| | ||||||||||||||||| |||||||||    
T  34454754 accaaaagtcaaatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatgatctatattt 34454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 37563625 - 37563737
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    |||||||||||||||| |||||   ||||||| |||| |||  |||||||| |||||| | |||||||||||||||||| ||||||||||| | ||||||    
T  37563625 aggaccaaaagtcaaaagattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaa 37563724  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  37563725 gacatatttaagc 37563737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 43938165 - 43938277
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | ||||||||||||||||||  ||||||| | || ||||||    
T  43938165 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaaa 43938264  T
Q  184 aacctatttaagc 196  Q
     || |||||||||    
T  43938265 gacatatttaagc 43938277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 5280464 - 5280273
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgat 104  Q
    |||||| ||||| |||||||||||||||||||||  |||||||| ||||||||| ||||||||| |       | || | |||||| ||| |||||| ||    
T  5280464 caaccatctcgcccaatcatcacttgccacatgggtaccacatcactaatgacaacccacctcaacaaaaaaaccta-ttaggaccgaaattcaaattat 5280366  T
Q  105 tatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||   ||| ||||||||||||  |||||||| |||||| |   |||||||||||||||| |||||||| || | |||||| || |||||||||    
T  5280365 taatatttacagtggcagattggaaggattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacgaaagacttatttaagc 5280273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 25049438 - 25049545
Alignment:
Q  91 aaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaaccta 189  Q
    |||||||||||||||| |||||||||||||| |||  || ||||| |||||| | |||  ||||||||||||  ||||||||||| | |||||| |||||    
T  25049438 aaaagtcaaatgattaaattttgcagtggcatattggaaagattagtaacttcagggagaaaaattcaaatgacctatatttacagggacgaaagaccta 25049537  T
Q  190 tttaagca 197  Q
    ||||||||    
T  25049538 tttaagca 25049545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19980137 - 19980190
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaat 54  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  19980137 aagcgaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaat 19980190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 12928231 - 12928038
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca----tagtcaggaccaaaagtcaaat 101  Q
    ||||||||||| ||||||||||||||||| |||  ||||| ||||||||||||||| || |||||        |    || | ||||||||| |||||||    
T  12928231 aaccacctcgcccaatcatcacttgccacttgggtaccacgtcgctaatgacagccaac-tcagcataaaaaaaaacctaattaggaccaaatgtcaaat 12928133  T
Q  102 gattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag-aacgaaaaacctatttaagc 196  Q
    |||||   | |||| |||||||||  |||||||| |||||||| |||||||||||||| ||| |||||||| |||  |||||| || |||||||||    
T  12928132 gattaatatatgca-tggcagattggaaggattagtaactttagggacgaaaattcaagtggcctatatttgcagcgacgaaagacatatttaagc 12928038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 12931009 - 12931086
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||||||||||||   ||||||  ||||||||  |||||||| |||||| | |||||||||||||||||    
T  12931009 aggaccaaaagtcaaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatg 12931086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 20947384 - 20947449
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    ||||||||| |  ||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||    
T  20947384 caaccaccttgtccaatcatcatttgccacatgggcaccacgtcgttaatgacagcccacctcagc 20947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 20947295 - 20947219
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||   |||| |||||||||||  |||||||| |||||| |||||||||||||||||||  ||||||||    
T  20947295 tcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatattt 20947219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 5280553 - 5280654
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaa 194  Q
    |||||||||||   |||||| || |||||| ||||||||| |||||| | |||||||||||||||||  |||||||| | || || ||| ||||||||||    
T  5280553 tcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaa 5280652  T
Q  195 gc 196  Q
    ||    
T  5280653 gc 5280654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 47082129 - 47082200
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||   |||| ||||||||||| ||||||||| |||||     ||||||||||||||||||||||||||    
T  47082129 tcaaatgattaatatttgtagtggcagattgaaaggattagtaact-----gacgaaaattcaaatggtctatattt 47082200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 34454592 - 34454510
Alignment:
Q  90 caaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||||||||||||   ||||||| || |||||  |||||||| |||||| |  ||||||||||||||||  ||||||||    
T  34454592 caaaagtcaaatgattaatatttgcaggggtagattggaaggattagtaacttcaaagacgaaaattcaaatgacctatattt 34454510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 12929525 - 12929602
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||||||||||||   ||||||  ||||||||  |||||||| | |||| | ||||| |||||||||||    
T  12929525 aggaccaaaagtcaaatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatg 12929602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 44545854 - 44545789
Alignment:
Q  132 attaataactttatggacgaaaattcaaatggtctatatttac-agaacgaaaaacctatttaagc 196  Q
    |||| |||||| ||| |||||||||||||||  |||||||| | ||||||||| ||||||||||||    
T  44545854 attagtaacttaatgaacgaaaattcaaatgacctatatttgcaagaacgaaagacctatttaagc 44545789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 5636096 - 5636052
Alignment:
Q  128 aaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||||||| |||||||| |||||||||||||||||  ||||||||    
T  5636096 aaggattagtaactttagggacgaaaattcaaatgacctatattt 5636052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 201
Target Start/End: Complemental strand, 14085 - 13889
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||       |||| | |||||||||||||||||||||    
T  14085 aaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaataacaacccacctcagcaaaataacataattaggaccaaaagtcaaatgatt 13986  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagcattta 201  Q
    |   ||||||| || || ||  |||||||| ||| || |  |||||||||||||||   ||||||||||||| |||||| || ||||||||| ||||    
T  13985 aatatttgcaggggtaggttggaaggattagtaatttgagtgacgaaaattcaaattacctatatttacagagacgaaagacatatttaagccttta 13889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 14164 - 14241
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatg 162  Q
    ||||||||||||||||||||||   |||| || ||||||||  |||||||| |||||| |  || |||||||||||||    
T  14164 aggaccaaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatg 14241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 196
Target Start/End: Original strand, 10854 - 11045
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatgatt 105  Q
    |||||||| || ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||       | || | |||||||||||||||||||||    
T  10854 aaccaccttgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgatt 10953  T
Q  106 atattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    |   |||| || ||| |||| ||| ||||| |||||| |||||||||||||||||||  |||||||| || | |||||| || |||||||||    
T  10954 aatatttgtaggggcggattgaaaagattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 11045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 10780 - 10688
Alignment:
Q  80 tagtcaggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatattt 172  Q
    |||| ||||||||||||||||||||||   ||||||| |||| ||| ||||||||||||| || | ||||||||||||||||||  |||||||    
T  10780 tagttaggaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattaataatttcagggacgaaaattcaaatggcttatattt 10688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 14424 - 14596
Alignment:
Q  3 gccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaatg 102  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||| |||||       | || | | |  ||||||| |||||    
T  14424 gccaaccacctcgcccaatcatcacttgccacatgggcaccacatcgttaatgacaacccacgtcagcaaaaaacc-taattatgttcaaaagttaaatg 14522  T
Q  103 attatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacag 176  Q
    ||||   ||| ||||||||||||  |||||||| |||||| | |||||||||||||||||  ||||||||||||    
T  14523 attaatatttacagtggcagatttgaaggattagtaacttcaaggacgaaaattcaaatgacctatatttacag 14596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 11054 - 10854
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnnca----tagtcaggaccaaaagt 96  Q
    |||||||||| ||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||        |    || | |||| |||||||    
T  11054 aagccaaccatctcgtccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaaaactaattaggatcaaaagt 10955  T
Q  97 caaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaag 195  Q
    ||||||||||   |||||| ||||| | |  |||||||| ||||||  ||||||||||||||||||  |||||||| || | |||||| |||||||||||    
T  10954 caaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 10855  T
Q  196 c 196  Q
    |    
T  10854 c 10854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8620 - 8815
Alignment:
Q  1 aagccaaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagcnnnnnnncatagtcaggaccaaaagtcaaa 100  Q
    |||||||||| ||||| ||||||||||||||||||||| | ||||||| |||||||||||||||||||          | | | ||||| ||||||||||    
T  8620 aagccaaccatctcgcccaatcatcacttgccacatgggctccacatcactaatgacagcccacctcaaaaacaagata-aattaggacaaaaagtcaaa 8718  T
Q  101 tgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaaaacctatttaagc 196  Q
    ||||||   ||||||||| || |||  |||||||||||||||   ||| | |||||||||||  ||||||||||| | |||||| ||||||||||||    
T  8719 tgattaatatttgcagtgacaaattggaaggattaataacttcgcggatggaaattcaaatgacctatatttacagggacgaaatacctatttaagc 8815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 8535 - 8435
Alignment:
Q  96 tcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaa 194  Q
    |||||||||||   ||||||||||||||||  |||||||| |||||| | |||||||||||||||||  ||||||||| ||| |||||| ||||||||||    
T  8535 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaagacctatttaa 8436  T
Q  195 g 195  Q
    |    
T  8435 g 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 864 - 981
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| ||||||||  |||||||| |||||| | |||||||||||||||||| | ||||||||| | ||||||    
T  864 aggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaa 963  T
Q  184 aacctatttaagcattta 201  Q
     || ||||||||| ||||    
T  964 gacatatttaagccttta 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 785 - 721
Alignment:
Q  6 aaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacctcagc 70  Q
    ||||||||||| ||||||||||||||||| |||  ||||| || ||||||||||||||| |||||    
T  785 aaccacctcgcccaatcatcacttgccacttgggtaccacgtcactaatgacagcccacttcagc 721  T

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Target: scaffold0206 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 10438 - 10321
Alignment:
Q  85 aggaccaaaagtcaaatgattatattttgcagtggcagattaaaaggattaataactttatggacgaaaattcaaatggtctatatttaca-gaacgaaa 183  Q
    ||||||||||||||||||||||   ||||||| |||| |||  |||||||| |||||| | ||||||||||||||||| ||||||||| || | ||||||    
T  10438 aggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaa 10339  T
Q  184 aacctatttaagcattta 201  Q
     |||||||||||| ||||    
T  10338 gacctatttaagccttta 10321  T

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Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 12096 - 12015
Alignment:
Q  121 agattaaaaggattaataactttatggacgaaaattcaaatggtctatatttacaga-acgaaaaacctatttaagcattta 201  Q
    ||||| ||||||||| |||||| | |||| |||||| ||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  12096 agattgaaaggattactaacttcagggacaaaaatttaaatgatctatatttacagagacgaaaaacatatttaagccttta 12015  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 120390 - 120451
Alignment:
Q  5 caaccacctcgctcaatcatcacttgccacatggacaccacatcgctaatgacagcccacct 66  Q
    |||| ||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||||    
T  120390 caactacctcgcccaatcatcacttgtcacatgagcaccacatcgctaacgacagcccacct 120451  T

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