View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1503_low_19 (Length: 350)

Name: NF1503_low_19
Description: NF1503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1503_low_19
NF1503_low_19
[»] chr5 (30 HSPs)
chr5 (1-339)||(3114015-3114357)
chr5 (113-241)||(37873588-37873716)
chr5 (113-263)||(35310477-35310627)
chr5 (113-334)||(27336722-27336944)
chr5 (122-214)||(25663009-25663101)
chr5 (113-324)||(32269663-32269875)
chr5 (116-263)||(15291954-15292101)
chr5 (113-242)||(13166859-13166988)
chr5 (122-263)||(33691983-33692124)
chr5 (123-263)||(43115386-43115525)
chr5 (113-334)||(43129563-43129784)
chr5 (122-212)||(38875676-38875766)
chr5 (122-263)||(14423716-14423857)
chr5 (113-319)||(35455985-35456192)
chr5 (163-334)||(433371-433543)
chr5 (130-210)||(26212564-26212644)
chr5 (122-187)||(34335375-34335440)
chr5 (116-209)||(32230489-32230582)
chr5 (113-189)||(42921726-42921802)
chr5 (120-170)||(430638-430688)
chr5 (47-105)||(37873747-37873805)
chr5 (137-198)||(8858969-8859030)
chr5 (122-212)||(8100590-8100680)
chr5 (120-192)||(14436536-14436605)
chr5 (116-166)||(14723269-14723319)
chr5 (39-103)||(23023527-23023591)
chr5 (39-106)||(32269905-32269972)
chr5 (120-214)||(9829331-9829423)
chr5 (119-184)||(26577407-26577472)
chr5 (47-114)||(15292124-15292192)
[»] chr4 (33 HSPs)
chr4 (113-334)||(31847116-31847338)
chr4 (120-339)||(53619622-53619842)
chr4 (122-236)||(55933417-55933531)
chr4 (119-334)||(50000781-50000998)
chr4 (113-249)||(56462049-56462184)
chr4 (113-263)||(132414-132566)
chr4 (127-208)||(23255747-23255828)
chr4 (122-235)||(48656866-48656979)
chr4 (113-233)||(30940697-30940816)
chr4 (122-237)||(12918326-12918441)
chr4 (113-263)||(25504324-25504472)
chr4 (113-251)||(26521517-26521655)
chr4 (112-229)||(50462908-50463025)
chr4 (113-232)||(600651-600770)
chr4 (113-211)||(34107674-34107774)
chr4 (150-280)||(53170573-53170703)
chr4 (39-107)||(45661623-45661691)
chr4 (122-233)||(12053451-12053562)
chr4 (122-249)||(16957580-16957707)
chr4 (113-189)||(43849350-43849426)
chr4 (120-167)||(24719970-24720017)
chr4 (113-176)||(50483211-50483274)
chr4 (167-277)||(38535500-38535610)
chr4 (113-211)||(46440869-46440967)
chr4 (122-198)||(28739943-28740020)
chr4 (113-165)||(3330025-3330077)
chr4 (49-105)||(30940841-30940897)
chr4 (113-168)||(7536594-7536649)
chr4 (39-105)||(4419195-4419261)
chr4 (137-183)||(46391323-46391369)
chr4 (136-198)||(52022166-52022228)
chr4 (122-183)||(6865828-6865889)
chr4 (119-192)||(45386060-45386133)
[»] chr6 (27 HSPs)
chr6 (113-263)||(33220639-33220789)
chr6 (113-234)||(17249262-17249383)
chr6 (113-263)||(959609-959759)
chr6 (120-263)||(357645-357788)
chr6 (115-263)||(45605-45753)
chr6 (113-320)||(4206466-4206674)
chr6 (113-263)||(34304525-34304675)
chr6 (119-263)||(28008915-28009062)
chr6 (39-320)||(32115650-32115926)
chr6 (113-263)||(34415465-34415615)
chr6 (137-324)||(12401384-12401572)
chr6 (129-237)||(34168913-34169021)
chr6 (113-219)||(24016366-24016472)
chr6 (125-251)||(34554217-34554343)
chr6 (113-193)||(4165920-4166000)
chr6 (123-334)||(29337939-29338147)
chr6 (181-334)||(20693457-20693610)
chr6 (122-263)||(28543413-28543554)
chr6 (120-209)||(3714953-3715042)
chr6 (46-104)||(29338189-29338247)
chr6 (122-215)||(28625968-28626062)
chr6 (39-107)||(28625863-28625930)
chr6 (120-203)||(6225108-6225191)
chr6 (46-105)||(28009096-28009155)
chr6 (119-188)||(7200540-7200607)
chr6 (39-99)||(3137362-3137422)
chr6 (136-260)||(13398113-13398237)
[»] chr1 (27 HSPs)
chr1 (113-263)||(34644595-34644745)
chr1 (113-280)||(19035476-19035643)
chr1 (130-319)||(50161288-50161478)
chr1 (113-324)||(28040993-28041205)
chr1 (113-320)||(29169664-29169871)
chr1 (113-273)||(25375751-25375911)
chr1 (114-264)||(42919890-42920039)
chr1 (113-339)||(45659498-45659726)
chr1 (122-233)||(31737281-31737392)
chr1 (122-263)||(2764517-2764658)
chr1 (112-319)||(37200011-37200217)
chr1 (123-188)||(21473042-21473107)
chr1 (115-214)||(20259774-20259873)
chr1 (113-322)||(4861857-4862067)
chr1 (113-211)||(22346924-22347022)
chr1 (120-237)||(16500070-16500187)
chr1 (113-212)||(2898731-2898833)
chr1 (116-209)||(36486918-36487011)
chr1 (44-105)||(38731546-38731607)
chr1 (136-212)||(23043929-23044005)
chr1 (144-263)||(37932146-37932264)
chr1 (113-162)||(24177540-24177589)
chr1 (121-202)||(50314613-50314694)
chr1 (141-208)||(35387643-35387710)
chr1 (113-174)||(7213279-7213341)
chr1 (149-183)||(19035424-19035458)
chr1 (113-155)||(47459711-47459753)
[»] chr8 (24 HSPs)
chr8 (113-339)||(35739838-35740064)
chr8 (122-261)||(38815332-38815471)
chr8 (120-263)||(39434703-39434846)
chr8 (113-263)||(500256-500406)
chr8 (113-335)||(25021669-25021892)
chr8 (113-263)||(3187998-3188148)
chr8 (113-280)||(24125057-24125224)
chr8 (113-233)||(6592604-6592724)
chr8 (119-322)||(8619849-8620047)
chr8 (113-248)||(10189572-10189707)
chr8 (120-234)||(4073571-4073685)
chr8 (128-198)||(8882371-8882441)
chr8 (120-216)||(28196228-28196324)
chr8 (153-233)||(37517163-37517243)
chr8 (46-109)||(25021919-25021982)
chr8 (44-215)||(42922103-42922273)
chr8 (113-209)||(6618313-6618409)
chr8 (160-236)||(11611199-11611275)
chr8 (123-201)||(10556283-10556361)
chr8 (39-105)||(38815226-38815292)
chr8 (134-218)||(4699919-4700002)
chr8 (112-151)||(43824017-43824056)
chr8 (130-192)||(39671170-39671232)
chr8 (178-235)||(8390234-8390291)
[»] chr7 (33 HSPs)
chr7 (120-263)||(28517215-28517358)
chr7 (122-320)||(4501296-4501495)
chr7 (113-263)||(21326766-21326916)
chr7 (113-339)||(43856903-43857130)
chr7 (114-320)||(45613712-45613919)
chr7 (113-251)||(32584630-32584768)
chr7 (116-280)||(982981-983145)
chr7 (122-320)||(5825311-5825508)
chr7 (113-225)||(19277322-19277434)
chr7 (113-264)||(27521500-27521651)
chr7 (113-263)||(2904394-2904544)
chr7 (120-280)||(3676675-3676836)
chr7 (113-209)||(30216040-30216136)
chr7 (113-248)||(22198015-22198150)
chr7 (113-248)||(22239671-22239806)
chr7 (113-251)||(24527618-24527756)
chr7 (113-198)||(42295177-42295262)
chr7 (117-213)||(10905151-10905246)
chr7 (122-193)||(40726478-40726549)
chr7 (121-257)||(9281066-9281201)
chr7 (121-257)||(9292037-9292172)
chr7 (163-251)||(33202405-33202493)
chr7 (113-233)||(34067820-34067939)
chr7 (44-105)||(43856811-43856872)
chr7 (128-251)||(25186876-25186999)
chr7 (122-251)||(34772819-34772946)
chr7 (165-233)||(1249667-1249735)
chr7 (120-321)||(38839360-38839564)
chr7 (44-107)||(30216165-30216228)
chr7 (39-105)||(27521403-27521469)
chr7 (126-198)||(43383211-43383283)
chr7 (116-164)||(48539213-48539261)
chr7 (39-105)||(45613951-45614017)
[»] chr3 (30 HSPs)
chr3 (115-280)||(44198798-44198963)
chr3 (120-256)||(46940705-46940841)
chr3 (113-319)||(7900887-7901094)
chr3 (113-339)||(53785738-53785965)
chr3 (113-251)||(39583169-39583307)
chr3 (113-326)||(49017992-49018206)
chr3 (115-219)||(37132971-37133075)
chr3 (113-263)||(52741439-52741590)
chr3 (113-237)||(26772787-26772911)
chr3 (113-247)||(4473090-4473224)
chr3 (113-280)||(13582539-13582705)
chr3 (136-263)||(37992384-37992511)
chr3 (113-234)||(5338672-5338796)
chr3 (119-184)||(38670887-38670952)
chr3 (120-251)||(38146092-38146223)
chr3 (113-190)||(32546824-32546901)
chr3 (113-233)||(3443270-3443390)
chr3 (113-233)||(38978757-38978877)
chr3 (113-192)||(7502010-7502090)
chr3 (120-207)||(54508367-54508455)
chr3 (122-184)||(51234654-51234716)
chr3 (136-207)||(43123197-43123268)
chr3 (39-105)||(13582442-13582508)
chr3 (39-105)||(38145988-38146054)
chr3 (122-179)||(52411903-52411960)
chr3 (71-115)||(7502109-7502153)
chr3 (38-106)||(46320025-46320093)
chr3 (43-105)||(46940882-46940944)
chr3 (289-334)||(29862003-29862048)
chr3 (120-192)||(35484691-35484763)
[»] scaffold0490 (1 HSPs)
scaffold0490 (113-280)||(6363-6529)
[»] scaffold0148 (1 HSPs)
scaffold0148 (113-263)||(33279-33428)
[»] chr2 (25 HSPs)
chr2 (123-326)||(23484802-23485006)
chr2 (113-320)||(41867778-41867986)
chr2 (113-324)||(2888545-2888753)
chr2 (122-263)||(5532457-5532598)
chr2 (113-233)||(4413024-4413144)
chr2 (120-280)||(9685326-9685486)
chr2 (116-339)||(19161634-19161858)
chr2 (113-251)||(28225029-28225167)
chr2 (154-263)||(44686490-44686598)
chr2 (113-339)||(17344667-17344894)
chr2 (130-210)||(1296031-1296111)
chr2 (116-192)||(13147096-13147175)
chr2 (122-263)||(27502400-27502540)
chr2 (117-198)||(34814812-34814893)
chr2 (126-189)||(18744956-18745019)
chr2 (122-251)||(3825764-3825894)
chr2 (113-183)||(33612555-33612625)
chr2 (114-168)||(2886638-2886692)
chr2 (120-198)||(5679314-5679392)
chr2 (39-105)||(17344570-17344636)
chr2 (39-105)||(41868017-41868083)
chr2 (116-163)||(20142753-20142800)
chr2 (47-105)||(13413291-13413349)
chr2 (186-263)||(9674946-9675023)
chr2 (135-188)||(44720374-44720427)
[»] scaffold0224 (1 HSPs)
scaffold0224 (114-264)||(18292-18441)
[»] scaffold0186 (1 HSPs)
scaffold0186 (113-263)||(10389-10543)
[»] scaffold1768 (1 HSPs)
scaffold1768 (116-320)||(54-259)
[»] scaffold0110 (1 HSPs)
scaffold0110 (113-339)||(47390-47617)
[»] scaffold0031 (1 HSPs)
scaffold0031 (122-215)||(49449-49542)
[»] scaffold0009 (1 HSPs)
scaffold0009 (113-251)||(103135-103272)
[»] scaffold0493 (1 HSPs)
scaffold0493 (113-182)||(8525-8594)
[»] scaffold0119 (1 HSPs)
scaffold0119 (141-225)||(16191-16275)
[»] scaffold0470 (1 HSPs)
scaffold0470 (113-209)||(7631-7727)
[»] scaffold0085 (1 HSPs)
scaffold0085 (145-198)||(37391-37444)


Alignment Details
Target: chr5 (Bit Score: 302; Significance: 1e-170; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 3114357 - 3114015
Alignment:
Q  1 atatattatatatcaagaataatcacacatgaa----agacaaatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgacc 96  Q
    ||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114357 atatattatatatcaagaataattacacatgaatagaagacaaatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgacc 3114258  T
Q  97 ctttgaactttgtagaaggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgttt 196  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114257 ctttgaactctgtagaaggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgttt 3114158  T
Q  197 gatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgtttcctct 296  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114157 gatgcaacttttagggctgcctgtcctaccgtaaaagccccgacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgtttcctct 3114058  T
Q  297 tacccatttgtacaccataacatctgcatgactaagtgatgat 339  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  3114057 tacccatttgtacaccataacatctgcatgactaagtgttgat 3114015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 37873716 - 37873588
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||| |    
T  37873716 aggaagccaaaagtgtcaaaagcaaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaacttttagag 37873617  T
Q  213 ctgtctgccctaccgtaaaagccccaacc 241  Q
    ||||||| |||||||||||||||||||||    
T  37873616 ctgtctgtcctaccgtaaaagccccaacc 37873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 35310477 - 35310627
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||    
T  35310477 aggaagccgaaagtgtcaaaagcagatggtataaaagcatgttgattgtcagaacatgctttctcatgtttggccactttgcttgacgcatcttttaggg 35310576  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     |||||| ||||||||||||||||| |||||||| ||||  ||||||||||    
T  35310577 ttgtctgtcctaccgtaaaagccccgacccctaaacccacaagtggtgaaa 35310627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 334
Target Start/End: Original strand, 27336722 - 27336944
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| ||| ||||||||||| ||||||||||||||  ||||||| |||||||||| | ||||||||||||| |||||||| |||| |||||||||||||    
T  27336722 aggaagccacaagtgtcaaaagcaaatggtataaaagtatgttgattgtcagaacacgatttctcatgtttgaccactttgcttgacgcaacttttaggg 27336821  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||||||| ||||  ||||||||||| |||||||| ||||  ||||||||||  |  |||||||| ||| |||  || |||||||  ||||||  ||||||    
T  27336822 ctgtctgtcctattgtaaaagcccccacccctaaacccacaagtggtgaaaccccagtcaagtccacacatgcatgttttcctccaacccatccgtacac 27336921  T
Q  312 cataacatctgcatgactaagtg 334  Q
    ||||||||| ||| | |||||||    
T  27336922 cataacatccgcaggcctaagtg 27336944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 25663101 - 25663009
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct 214  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  25663101 aaagtgtcaaaagcaaatggtataaaaacatgttgattatcagaacacgctttctcatgtttggccactttgtttgatgcagcttttagggct 25663009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 324
Target Start/End: Complemental strand, 32269875 - 32269663
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| | ||||| |||||| |||||||||||||| | |||||| ||||||||||  |||||||||||||| |||||||| |||||||| |||||||||    
T  32269875 aggaaatcgaaagtatcaaaagcaaatggtataaaagcgtgttgattgtcagaacacactttctcatgtttgaccactttggttgatgcagcttttaggg 32269776  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
     ||  || |||||| |||||| ||| || |||||| |||  ||||||||||  |  |||||||||||| |||  || ||||||| |||||||  ||||||    
T  32269775 ttgcatgtcctaccataaaaggcccgacacctaattccagaagtggtgaaaccccagtcaagtctacacatgcatgttttcctcctacccatccgtacac 32269676  T
Q  312 cataacatctgca 324  Q
    |||||||||||||    
T  32269675 cataacatctgca 32269663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 116 - 263
Target Start/End: Complemental strand, 15292101 - 15291954
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    |||| |||||||| |||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| || |||||||||| ||    
T  15292101 aaactaaaagtgtaaaaaacaaattgtataaaaacatgttgattgtcagaacacgttttctcatgtttggccactttgtttgacgccacttttagggttg 15292002  T
Q  216 tctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||| | ||||| ||||| ||| || | |||||| |  ||||||||||    
T  15292001 tctgtcataccgcaaaaggcccgacacttaatccaacaagtggtgaaa 15291954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 13166988 - 13166859
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||| |||| |||  ||||||||    
T  13166988 aggaagccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttagccactttgcttgacgcagattttaggg 13166889  T
Q  213 ctgtctgccctaccgtaaaagccccaaccc 242  Q
     |||||| || ||||||||||||| |||||    
T  13166888 ttgtctgtcccaccgtaaaagccctaaccc 13166859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 33692124 - 33691983
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| ||||||||| |||| |||||||| ||||| |||| | ||| |||||||||||||||||| |||| ||| |||||||| ||| ||| |    
T  33692124 aaagtgtcaaaagcaaatggtacaaaagcatgttgattgtcataacacgttttgtcatgtttggccactttgcttgacgcagcttttaggcctgcctgtc 33692025  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||||||||||||||| |||||||| ||||  ||||||||||    
T  33692024 ctaccgtaaaagccccgacccctaaacccacaagtggtgaaa 33691983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 123 - 263
Target Start/End: Complemental strand, 43115525 - 43115386
Alignment:
Q  123 aagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccc 222  Q
    ||||||||||| |||||| ||| ||| |||||||| ||||| |||| |||||||||| |||| || |||| ||| | |||||||||||||||||||  ||    
T  43115525 aagtgtcaaaagcaaatgctatgaaagcatgttgattgtcaaaacacgctttctcatatttgaccgctttattt-acgcaacttttagggctgtctatcc 43115427  T
Q  223 taccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  43115426 taccgtaaaagccccgacctctaatcccatgagtggtgaaa 43115386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 334
Target Start/End: Original strand, 43129563 - 43129784
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| ||| |||||||| ||||||||| ||||||||||||| |||||||||| | ||||||||||||| |||||||| |||| ||| ||||||||     
T  43129563 aggaaaccgaaaatgtcaaaagcaaatggtagaaaaacatgttgattgtcagaacacgttttctcatgtttgaccactttgcttgacgcatcttttagga 43129662  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgtttcctcttacccatttgtacacc 312  Q
    |||  || || ||||||||||  || ||||||||||| |  ||||||||||  |  ||||| |  ||| |||  | ||||||| || ||||  ||||| |    
T  43129663 ctgaatgtccaaccgtaaaagttccgacccctaatccaacaagtggtgaaaccccagtcaatttcacacatgcatttttcctcctatccatccgtacatc 43129762  T
Q  313 ataacatctgcatgactaagtg 334  Q
    |||||||||||||| |||||||    
T  43129763 ataacatctgcatgcctaagtg 43129784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 38875676 - 38875766
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||| | ||||||||||||||  ||||||||    
T  38875676 aaagtgtcaaaaacaaatggtacaaaaacatgttgattgtcagaacacactttctcatgtttggtcgctttgtttgatgcagtttttaggg 38875766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 14423716 - 14423857
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||| || ||||||| |||| |||  |||||||| || ||| |    
T  14423716 aaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgttcggtcactttgcttgacgcattttttagggttgcctgtc 14423815  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||| || ||||  || || ||||||||||  ||||||||||    
T  14423816 ctacggttaaaggtccgacacctaatcccacaagtggtgaaa 14423857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 319
Target Start/End: Original strand, 35455985 - 35456192
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| |||||| |||||||| |||| ||||||||| |||||||| ||| |||||| ||||||||||||||| ||| |||  || |  |||||||| |||    
T  35455985 aggaagccaaaattgtcaaaagcaaaaggtataaaagcatgttgattgttagaacacgctttctcatgtttgaccattttacttaacacaactttttggg 35456084  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgttt-cctcttacccatttgtacac 311  Q
    ||  || |||||||||||||| ||  ||||||||||| | ||||||  |||  | ||||||||| ||| |||  | ||| |||| ||||||| |||||||    
T  35456085 ctacctaccctaccgtaaaaggccggacccctaatcctacgagtggcaaaaccccggtcaagtccacacatgcatatttacctcctacccatctgtacac 35456184  T
Q  312 cataacat 319  Q
    ||||||||    
T  35456185 cataacat 35456192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 334
Target Start/End: Original strand, 433371 - 433543
Alignment:
Q  163 agaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaa 262  Q
    |||||| |||||||||||||||||||||||| ||||  || |||||| || |||||  ||||||||||||||||| |||| ||| ||||   ||||||||    
T  433371 agaacacgctttctcatgtttggccactttgcttgacacagcttttaaggttgtctatcctaccgtaaaagcccctacccttaaacccacaggtggtgaa 433470  T
Q  263 atactggtcaagtctacaaatg-agtgtttcctcttacccatttgtacaccataacatctgcatgactaagtg 334  Q
    |  | ||||||||| ||| ||| |   |||||||  |||||| |||||||||||||||| ||||| |||||||    
T  433471 accccggtcaagtccacacatgcatattttcctccaacccatctgtacaccataacatccgcatgcctaagtg 433543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 26212644 - 26212564
Alignment:
Q  130 aaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttag 210  Q
    ||||||||||||||||||| ||||||||  ||||||| | |||||||||||||||||||||||| |||| |||||||||||    
T  26212644 aaaaacaaatggtataaaagcatgttgatcgtcagaatacgctttctcatgtttggccactttgcttgacgcaacttttag 26212564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 34335375 - 34335440
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggcc 187  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||    
T  34335375 aaagtgtcaaaaacaaatggtataaaagcatgttgattgtcaggacacgctttctcatgtttggcc 34335440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 32230582 - 32230489
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    |||||||||||||| ||  || ||||||||||| | |||||| ||||||||||   |||||||||||||| ||||||| |||| ||||||||||    
T  32230582 aaaccaaaagtgtcgaacgcagatggtataaaagcttgttgattgtcagaacacattttctcatgtttggtcactttgcttgacgcaactttta 32230489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 42921726 - 42921802
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccac 189  Q
    |||||||| ||||||||| || |||||||||||||| |||||||| |||||||||| | |||||| |||||| ||||    
T  42921726 aggaaaccgaaagtgtcataagcaaatggtataaaagcatgttgattgtcagaacacgttttctcgtgtttgaccac 42921802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 430638 - 430688
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatg 170  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  430638 caaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacatg 430688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 37873805 - 37873747
Alignment:
Q  47 taaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    ||||||||||||||| |||||| | ||| ||||||||||| ||||||||||||||||||    
T  37873805 taaacacaacattcatagacctagaagtcatgacattgttctgcatgaccctttgaact 37873747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 8858969 - 8859030
Alignment:
Q  137 aatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||| | |||||| ||||    
T  8858969 aatgatataaaaacatgttgattgtcagaacacgctttctcatgtttgactactttgcttga 8859030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 8100590 - 8100680
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||||||| ||||||||||||||||| |||||  | ||||| |||| | ||||||||||||| ||| |||  |||||||| | |||||||    
T  8100590 aaagtgtcacaaacaaatggtataaaagcatgtaaattgtcacaacacgttttctcatgtttgaccattttacttgatgcagcgtttaggg 8100680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 14436536 - 14436605
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccacttt 192  Q
    |||| |||||||||||||||| ||||||||||||||||   | |||||| | ||| |||||||||||||||||    
T  14436536 caaaggtgtcaaaaacaaatgatataaaaacatgttga---ttagaacacgttttttcatgtttggccacttt 14436605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 14723319 - 14723269
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaa 166  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  14723319 aaaccaaaagtgtaaaaaacaaatgatataaaagcatgttgattgtcagaa 14723269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 23023527 - 23023591
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaa 103  Q
    |||||||||||||||||||||||  ||||| ||||  ||||||||| | ||||||||| ||||||    
T  23023527 aatcttcgtaaacacaacattcatcgacctaggagacatgacattgatatgcatgaccttttgaa 23023591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 32269972 - 32269905
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaactt 106  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||| | ||||||||| |||||||||    
T  32269972 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccttttgaactt 32269905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 9829423 - 9829331
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct 214  Q
    ||||||||||||| | ||||||||||||| |||||||| ||||| ||||   ||| ||||| || ||||||||| || | |||||||||||||||    
T  9829423 caaaagtgtcaaatataaatggtataaaagcatgttgattgtcaaaacacattttatcatg-ttagccactttgctt-acgcaacttttagggct 9829331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 26577472 - 26577407
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttg 184  Q
    |||||||||| ||| |||||| |||||||||||||||||  ||| |||||  |||||| |||||||    
T  26577472 ccaaaagtgtgaaacacaaattgtataaaaacatgttgatagtcggaacacactttcttatgtttg 26577407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 15292192 - 15292124
Alignment:
Q  47 taaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaac-tttgtagaag 114  Q
    |||||||||||||||  ||||| |||| | |||||||| | ||||||||| ||||||| ||||||||||    
T  15292192 taaacacaacattcatggacctaggagatgtgacattgctatgcatgaccttttgaacttttgtagaag 15292124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 8e-49; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 113 - 334
Target Start/End: Original strand, 31847116 - 31847338
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||| |||||||||    
T  31847116 aggaagccaaaagtgtcaaaagcaaatggtaaaaaaacatgttgactgtcagaacatggtttctcatgtttgaccactttgcttgacgcagcttttaggg 31847215  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||| ||| ||||| ||||||||||| |||||||| ||||  ||||||||||  || |||||||| ||| |||  || |||||||  | |||| |||||||    
T  31847216 ctgcctgtcctactgtaaaagcccccacccctaaacccacaagtggtgaaaccctagtcaagtccacacatgcatgttttcctccaatccatctgtacac 31847315  T
Q  312 cataacatctgcatgactaagtg 334  Q
    ||||| ||||||| | |||||||    
T  31847316 cataatatctgcaggcctaagtg 31847338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 120 - 339
Target Start/End: Original strand, 53619622 - 53619842
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||| |||| ||| ||||||||| || |||    
T  53619622 caaaagtgtcaaaaacaaatggtataaaagcatgttgattgtcagaacacgttttctcatgtttggccactttgcttgacgcagcttttagggttgcctg 53619721  T
Q  220 ccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataaca 318  Q
     ||||| ||||||||||| ||| |||| ||||  ||||||||||  |  |||||||| ||| |||  || |||||||  || |||  |||||||||||||    
T  53619722 tcctactgtaaaagcccccacctctaaacccacaagtggtgaaaccccagtcaagtccacacatgcatgttttcctccaactcatccgtacaccataaca 53619821  T
Q  319 tctgcatgactaagtgatgat 339  Q
    | |||| | ||||||| ||||    
T  53619822 tatgcaggcctaagtgttgat 53619842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 55933531 - 55933417
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| |||||||||||||| |||||||| ||| ||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||| |    
T  55933531 aaagtgtcaaaagcaaatggtataaaagcatgttgattgttagaacaaactttctcatgtttggccactttgtttgacgcaacttttagggctgactgtc 55933432  T
Q  222 ctaccgtaaaagccc 236  Q
    |||||||||||||||    
T  55933431 ctaccgtaaaagccc 55933417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 119 - 334
Target Start/End: Complemental strand, 50000998 - 50000781
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaa-catgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtc 217  Q
    ||||||||||||||| ||||| |||| |||| |||||||| |||||||||| ||||||||||||||| |||||||| |||| ||| ||||||| ||||||    
T  50000998 ccaaaagtgtcaaaagcaaattgtattaaaagcatgttgattgtcagaacacgctttctcatgtttgaccactttgcttgacgcagcttttagagctgtc 50000899  T
Q  218 tgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataa 316  Q
    || ||||||||||||||||| |||||| | ||||  ||||||||||  |  |||||||| ||| |||  || |||||||  ||||||  |||||||||||    
T  50000898 tgtcctaccgtaaaagcccccaccccttaacccacaagtggtgaaaccccagtcaagtccacacatgcatgttttcctccaacccatccgtacaccataa 50000799  T
Q  317 catctgcatgactaagtg 334  Q
    |||| ||| | |||||||    
T  50000798 catccgcaggcctaagtg 50000781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 249
Target Start/End: Complemental strand, 56462184 - 56462049
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||||||||    
T  56462184 aggaaaccaaaagtgtctaaaacaaatggtataaaaacatgttgattgtcagaacacgctttatcatgttt-gccactttgtttgacgcaacttttaggg 56462086  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcc 249  Q
      ||||   | |||||||||| | | |||||||||||    
T  56462085 tggtctatacaaccgtaaaagtctcgacccctaatcc 56462049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 132414 - 132566
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||| | |||||||||||| |||| |||| |||| ||| |||||||||    
T  132414 aggaaaccgaaagtgtaaaaaacaaatggtataaaagcatgttgattgtcagaacacgatttctcatgttttgccattttgcttgacgcagcttttaggg 132513  T
Q  213 ctgtctgccct--accgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||| ||| |||  |||||||||| ||| ||||||||||| |  ||||||||||    
T  132514 ctgcctgtcctacaccgtaaaagtcccgacccctaatccaacaagtggtgaaa 132566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 23255747 - 23255828
Alignment:
Q  127 gtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttt 208  Q
    |||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  23255747 gtcaaaaacaaatggtataaaagcatgttaattgtcagaacacgctttctcatgtttggccactttgcttgacgcaactttt 23255828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 48656979 - 48656866
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||||||||||||||||||||||||||||| |||| || || ||||  |||||||||||||| ||| |||  |||||| |||||||||||||||||| |    
T  48656979 aaagtgtcaaaaacaaatggtataaaaacattttgattgacataacacactttctcatgtttgtccattttacttgatgaaacttttagggctgtctgtc 48656880  T
Q  222 ctaccgtaaaagcc 235  Q
     ||| |||||||||    
T  48656879 atactgtaaaagcc 48656866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 30940816 - 30940697
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| | |||||||||||| ||| |||||||||| |||||||| |||||||||| ||||||||||||||| |||||||  |||| |||||||||||||    
T  30940816 aggaaatcgaaagtgtcaaaagcaa-tggtataaaagcatgttgattgtcagaacacgctttctcatgtttgaccactttacttgacgcaacttttaggg 30940718  T
Q  213 ctgtctgccctaccgtaaaag 233  Q
     |||||| ||||  |||||||    
T  30940717 ttgtctgtcctatggtaaaag 30940697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 12918441 - 12918326
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||||||||||  |||| ||||||||   |||||| |||||||||| | ||||| ||||||| ||||||||||||| ||||||||||||| ||| || |    
T  12918441 aaagtgtcaaaagtaaatagtataaaagtgtgttgattgtcagaacacgatttcttatgtttgaccactttgtttgacgcaacttttagggttgtttgtc 12918342  T
Q  222 ctaccgtaaaagcccc 237  Q
    ||||||||||||||||    
T  12918341 ctaccgtaaaagcccc 12918326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 25504324 - 25504472
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||||||| |||||||| |||| ||||||||||||||| || ||| |||||| | ||||||||||||| ||| |||| |||||||||| |||||||    
T  25504324 aggaaaccaaaaatgtcaaaagcaaacggtataaaaacatgtcgattgttagaacacgttttctcatgtttgacca-tttgcttgatgcaac-tttaggg 25504421  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     || ||| | ||||||||||| ||  || ||||||||||  ||||||||||    
T  25504422 ttgcctgtcataccgtaaaaggcctgacgcctaatcccacaagtggtgaaa 25504472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 26521517 - 26521655
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||||||||||||||  ||| || ||| ||||||| |||||||| ||||| |||| | ||| |||||||| |||||||||||||| |||||||||||||    
T  26521517 aggaaaccaaaagtgttgaaagcatatgatataaaagcatgttgattgtcataacacgttttttcatgtttagccactttgtttgacgcaacttttaggg 26521616  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
     ||| || |||||| ||||||  |  |||||||||||||    
T  26521617 ttgtttgtcctaccataaaaggtctgacccctaatccca 26521655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 50463025 - 50462908
Alignment:
Q  112 aaggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagg 211  Q
    ||||||| |||||||||||||| |||||||||| ||| |||||||| |||| ||| |  ||||||||||||||| ||  ||| |||| |||||||||| |    
T  50463025 aaggaaatcaaaagtgtcaaaagcaaatggtatgaaagcatgttgattgtcggaagacactttctcatgtttggtcatcttgcttgacgcaacttttaag 50462926  T
Q  212 gctgtctgccctaccgta 229  Q
    |||||||| |||||||||    
T  50462925 gctgtctgtcctaccgta 50462908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 600770 - 600651
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||| ||||| |||||||||||||| |||||| | ||| |||||| | |||||||||||||| ||||||| ||||   |||||||||||    
T  600770 aggaaaccgaaagtgacaaaagcaaatggtataaaagcatgttaattgttagaacacgttttctcatgtttggtcactttgcttgacataacttttaggg 600671  T
Q  213 ctgtctgccctaccgtaaaa 232  Q
     |||||| ||||| ||||||    
T  600670 ttgtctgtcctacagtaaaa 600651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 34107774 - 34107674
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcaga--acatgctttctcatgtttggccactttgtttgatgcaacttttag 210  Q
    |||||| | |||||||||||||||||||||||||||||||||||| | || ||  ||| | |||||||||||||||||||| |||||| |||| ||||||    
T  34107774 aggaaatcgaaagtgtcaaaaacaaatggtataaaaacatgttgattatctgaacacacgttttctcatgtttggccacttcgtttgacgcaatttttag 34107675  T
Q  211 g 211  Q
    |    
T  34107674 g 34107674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 53170573 - 53170703
Alignment:
Q  150 catgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcc 249  Q
    ||||||||||||||||||| ||||||||||||||||| |||||   | |  | ||||||||||||| ||| | ||| |||||||  || || ||||||||    
T  53170573 catgttgactgtcagaacacgctttctcatgtttggctactttacctaacacgacttttagggctgcctgtcatactgtaaaaggtccgacacctaatcc 53170672  T
Q  250 catgagtggtgaaatactggtcaagtctaca 280  Q
    || |||||||||||  |  ||||||||||||    
T  53170673 cacgagtggtgaaaccccagtcaagtctaca 53170703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 45661623 - 45661691
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaacttt 107  Q
    |||| |||||||||||| |||||  |||||  ||||||||||||||||||| |||||||||||||||||    
T  45661623 aatcctcgtaaacacaatattcatggacctacgagttatgacattgttgtgtatgaccctttgaacttt 45661691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 12053451 - 12053562
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||| ||| ||| |||||| ||||||||| | |||| ||| |||||| | ||||||||||||| | ||||||||||| ||| ||||||| ||||| || |    
T  12053451 aaagagtcgaaagcaaatgatataaaaacgttttgattgttagaacacgatttctcatgtttgacaactttgtttgacgcagcttttagagctgtttgtc 12053550  T
Q  222 ctaccgtaaaag 233  Q
    |||| |||||||    
T  12053551 ctactgtaaaag 12053562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 16957580 - 16957707
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| ||||||||||| || |||||||| | ||||| ||  ||||||||||||||| || |||| |  | |||||||||||| ||| ||  |    
T  16957580 aaagtgtcaaaagcaaatggtatataagcatgttgattatcagagcacactttctcatgtttggtcattttgctctacgcaacttttaggactgcctatc 16957679  T
Q  222 ctaccgtaaaagccccaacccctaatcc 249  Q
    |||| |||| || ||| |||||||||||    
T  16957680 ctactgtaagaggcccgacccctaatcc 16957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 43849426 - 43849350
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccac 189  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||  | || ||||| |||||||| |||||||||||    
T  43849426 aggaagccaaaagtgtcaaacacaaatagtataaaagcatgttggttatctgaacacgctttctcgtgtttggccac 43849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 24719970 - 24720017
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaac 167  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  24719970 caaaagtgtcaaacacaaatgatataaaaacatgttgattgtcagaac 24720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 50483274 - 50483211
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttct 176  Q
    |||||||| |||||||| ||| |||||||||||||| |||||||| |||||||| | |||||||    
T  50483274 aggaaaccgaaagtgtcgaaagcaaatggtataaaatcatgttgattgtcagaagacgctttct 50483211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 277
Target Start/End: Complemental strand, 38535610 - 38535500
Alignment:
Q  167 catgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatac 266  Q
    |||||||||| || |||| |||||||||| ||  |||||||||| ||||||||  ||||  |||||||||||||| | |||||||  ||| ||||||  |    
T  38535610 catgctttcttatatttgaccactttgttagacacaacttttagagctgtctgttctacattaaaagccccaacctcaaatcccacaagtagtgaaaccc 38535511  T
Q  267 tggtcaagtct 277  Q
    | |||||||||    
T  38535510 tagtcaagtct 38535500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 46440967 - 46440869
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagg 211  Q
    ||||| || |||||||||||| |||||| ||||||||| |||| | ||| ||||||  |||| | ||||||| ||||||||||||| |  |||||||||    
T  46440967 aggaagccgaaagtgtcaaaagcaaatgatataaaaacgtgttaattgttagaacacacttttttatgtttgaccactttgtttgacgttacttttagg 46440869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 28739943 - 28740020
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaa-acatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    ||||||||||| | ||||||||||||| ||||||| ||||||| ||||   |||||| |||||||||||||| |||||    
T  28739943 aaagtgtcaaacataaatggtataaaacacatgttaactgtcacaacacaatttctcgtgtttggccactttatttga 28740020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 3330025 - 3330077
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcaga 165  Q
    ||||| ||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  3330025 aggaagccaaaagtgtcaaaagcaaatagtataaaagcatgttgattgtcaga 3330077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 30940897 - 30940841
Alignment:
Q  49 aacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    ||||||||||||| |||||| |||  |||||||||||| ||||||||| ||||||||    
T  30940897 aacacaacattcatagacctaggatatatgacattgttatgcatgaccttttgaact 30940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 7536649 - 7536594
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaaca 168  Q
    |||||||  ||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  7536649 aggaaactgaaattgtcaaaaacaaattgtataaaaacatgttgattgtcaaaaca 7536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 4419195 - 4419261
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| ||||||||||||||||||  ||||| ||||  || |||||||| ||||| ||||||||||||    
T  4419195 aatcatcgtaaacacaacattcatggacctaggagacataacattgttatgcataaccctttgaact 4419261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 46391369 - 46391323
Alignment:
Q  137 aatggtataaaaacatgttgactgtcagaacatgctttctcatgttt 183  Q
    |||||||||||||||||||| |||| |||||||| |||||| |||||    
T  46391369 aatggtataaaaacatgttggctgtgagaacatgttttctcgtgttt 46391323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 52022166 - 52022228
Alignment:
Q  136 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    ||||||||||||||||||| |||||||||||||   | |||||| ||||| ||||||| ||||    
T  52022166 aaatggtataaaaacatgtcgactgtcagaacactttctctcatttttggtcactttgattga 52022228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 6865889 - 6865828
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgttt 183  Q
    |||||||||||| |||||| ||||||| ||||||||  ||||||||| | |||||| |||||    
T  6865889 aaagtgtcaaaagcaaatgatataaaagcatgttgatagtcagaacacgttttctcgtgttt 6865828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 45386133 - 45386060
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccacttt 192  Q
    |||||||| |||||   |||||||||||||| |  |||| |||||||||| ||||||| ||||||| |||||||    
T  45386133 ccaaaagtttcaaatgtaaatggtataaaaagaaattgattgtcagaacacgctttcttatgtttgaccacttt 45386060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 263
Target Start/End: Complemental strand, 33220789 - 33220639
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| |||||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||| |||||||| ||||||| |    
T  33220789 aggaagccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcaacacacgctttctcatgtttggccactttgcttgatgcagcttttagag 33220690  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||||| ||||||||||||||||| |||||||| ||||  ||||||||||    
T  33220689 ctgtctgtcctaccgtaaaagccccgacccctaaacccacaagtggtgaaa 33220639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 17249383 - 17249262
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  17249383 aggaagccaaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacactttctcatgtttggccactttgtttgacgcaacttttaggg 17249284  T
Q  213 ctgtctgccctaccgtaaaagc 234  Q
     ||| || ||||||||||||||    
T  17249283 ttgtttgtcctaccgtaaaagc 17249262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 959609 - 959759
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||| |||||||||| | ||||||||| || ||||||||| ||||  ||||||||||||    
T  959609 aggaaaccgaaaatgtcaaaaacaaatggtataaagacatgttgattgtcagaacacgttttctcatggttagccactttgcttgacacaacttttaggg 959708  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     ||| || ||||||||||||| ||| || ||||||||||| ||||||||||    
T  959709 ttgtttgtcctaccgtaaaaggcccgacacctaatcccataagtggtgaaa 959759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 357788 - 357645
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    ||||||||| ||||||||| | ||||||| |||||| | |||||||||| |||||||||||||||||||||||| |||| | | |||||||||||| |||    
T  357788 caaaagtgttaaaaacaaaggttataaaagcatgttcattgtcagaacacgctttctcatgtttggccactttgcttgacgaagcttttagggctgcctg 357689  T
Q  220 ccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     |||||||||||||| || |||||||| ||||  ||||||||||    
T  357688 tcctaccgtaaaagcaccgacccctaaacccacaagtggtgaaa 357645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 263
Target Start/End: Complemental strand, 45753 - 45605
Alignment:
Q  115 gaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct 214  Q
    |||||| |||||||||||||||||||| |||||| |||||||| |||||||||| | |||||||||||||  ||||||| |||||||| ||||||| |||    
T  45753 gaaaccgaaagtgtcaaaaacaaatggaataaaagcatgttgattgtcagaacacgttttctcatgtttgatcactttgcttgatgcagcttttagagct 45654  T
Q  215 gtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    | ||| ||||| |||||||  || || ||||||||||  ||||||||||    
T  45653 gcctgtcctacggtaaaaggtccgacacctaatcccacaagtggtgaaa 45605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 320
Target Start/End: Complemental strand, 4206674 - 4206466
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| |||||| ||||||| |||||| | |||||||||| |||||||||||||| ||||||||| |||| || ||||||| ||    
T  4206674 aggaacccgaaagtgtcaaaagcaaatgatataaaagcatgttcattgtcagaacacgctttctcatgtttagccactttgcttgacgccacttttaagg 4206575  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    |||  || |||||||||||||  |  |  ||||||||||  ||||||||||  |  |||||||||||| |||  || |||||||  ||||||||||||||    
T  4206574 ctgcatgtcctaccgtaaaaggtctgatgcctaatcccacaagtggtgaaaccccagtcaagtctacacatgcatgttttcctccaacccatttgtacac 4206475  T
Q  312 cataacatc 320  Q
    |||||||||    
T  4206474 cataacatc 4206466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 34304525 - 34304675
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||  | |||| |||| ||| |||||||||    
T  34304525 aggaagcccaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggttattttgcttgacgcagcttttaggg 34304624  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||  ||| || |||||||||||||| || ||||| ||||  ||||||||||    
T  34304625 ctagctgtccaaccgtaaaagccccgactcctaaacccacaagtggtgaaa 34304675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 263
Target Start/End: Complemental strand, 28009062 - 28008915
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaacatgtt---gactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    ||||||||||||||| |||||||||||||| ||| ||   || ||| |||||| ||||||||||||||| || ||||| |||| | | ||||||||| ||    
T  28009062 ccaaaagtgtcaaaagcaaatggtataaaaccatattcttgattgttagaacaagctttctcatgtttgaccgctttgcttgacgtagcttttagggttg 28008963  T
Q  216 tctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
      || ||||||||||||||||| ||||||||||||| |||||||||||    
T  28008962 catgtcctaccgtaaaagccccgacccctaatcccacgagtggtgaaa 28008915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 320
Target Start/End: Original strand, 32115650 - 32115926
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact--ttgtagaaggaaaccaaaagtg-tcaaaaac 135  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||||| ||||||||| ||||||||  ||||||||||  | ||    || |||||| |    
T  32115650 aatcatcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaactctttgtagaaggtcaacagccatggtcaaaagc 32115749  T
Q  136 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagcc 235  Q
    ||||||| ||||| |||||||        ||||  |||||||||||||||||||||||||||| |||||||||| |||||  || |||| |||||||  |    
T  32115750 aaatggtctaaaagcatgttgc-------aaca--ctttctcatgtttggccactttgtttgacgcaacttttaaggctgcatgtcctaacgtaaaatgc 32115840  T
Q  236 ccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacatc 320  Q
    || || ||||||||||| |||| |||||  | ||||||||||||| |||  || ||||||| ||| ||| ||||||||||||||||    
T  32115841 ccgacacctaatcccataagtgatgaaaccccggtcaagtctacacatgcatgttttcctcctactcatctgtacaccataacatc 32115926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 34415465 - 34415615
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||  ||||||||||||| |||| |||| |||| ||| ||| || ||    
T  34415465 aggaaacctaaagtgtcaaaaacaaatggcataaaagcatgttgattgtcagaacacactttctcatgtttcgccattttgcttgacgcagcttgtaagg 34415564  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     || ||  ||||||||||||| ||  ||||||||||| | | |||||||||    
T  34415565 atgcctatcctaccgtaaaagtcctgacccctaatccaacgtgtggtgaaa 34415615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 324
Target Start/End: Original strand, 12401384 - 12401572
Alignment:
Q  137 aatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccc 236  Q
    ||||||||| || |||||||| |  || |||| ||| ||| ||||||||||||||||||||| ||||||||||| ||||  || |||||| |||||||||    
T  12401384 aatggtatataagcatgttgattagcaaaacacgctatcttatgtttggccactttgtttgacgcaacttttagtgctgcttgtcctaccataaaagccc 12401483  T
Q  237 caacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacatctgca 324  Q
      | || ||||||||| ||||||||||  |   ||||||||||| |||  || ||||||| |||||||  |||||||||||||| ||||    
T  12401484 tgaaccataatcccataagtggtgaaaccccaatcaagtctacacatgcatgttttcctcctacccatccgtacaccataacatttgca 12401572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 34168913 - 34169021
Alignment:
Q  129 caaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgt 228  Q
    ||||| |||||||||||||| |||||||  ||||  ||||||||||||||||||||||||||||| |||| |||| |||||||| ||  || ||||| ||    
T  34168913 caaaagcaaatggtataaaagcatgttgcttgtccaaacatgctttctcatgtttggccactttgcttgacgcaaattttagggttgcatgtcctacggt 34169012  T
Q  229 aaaagcccc 237  Q
    |||||||||    
T  34169013 aaaagcccc 34169021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 24016366 - 24016472
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||||||| | |||| | ||||||||||||||||||||||| ||| |||||| ||||||||||||||| | | |||  ||||||||||||||| ||    
T  24016366 aggaaaccaaaactatcaatagcaaatggtataaaaacatgttgattgtgagaacaagctttctcatgtttgactattttacttgatgcaacttttacgg 24016465  T
Q  213 ctgtctg 219  Q
     ||||||    
T  24016466 ttgtctg 24016472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 34554343 - 34554217
Alignment:
Q  125 gtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcccta 224  Q
    |||||||||  ||||||||||||||||| |||| | |||||||| |||||||||||||||| |  |||| |||| ||||||||||| | |||||| ||||    
T  34554343 gtgtcaaaagtaaatggtataaaaacatcttgattatcagaacacgctttctcatgtttggtcgttttgcttgacgcaacttttagtgttgtctgaccta 34554244  T
Q  225 ccgtaaaagccccaacccctaatccca 251  Q
    |  |||||||||  | |||||||||||    
T  34554243 ctttaaaagccctgatccctaatccca 34554217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 4166000 - 4165920
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttg 193  Q
    ||||| || |||||||||||| |||||| ||||||| |||||||| |||||||||| |||||||||||||| |||||||||    
T  4166000 aggaacccgaaagtgtcaaaagcaaatgatataaaagcatgttgattgtcagaacacgctttctcatgtttagccactttg 4165920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 334
Target Start/End: Complemental strand, 29338147 - 29337939
Alignment:
Q  123 aagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccc 222  Q
    ||||||||||| |||||||||||| | |||||||| ||| |||||| | |||||||||||||||  ||||| ||||  || |||||| |  ||| || ||    
T  29338147 aagtgtcaaaagcaaatggtataagagcatgttgattgttagaacacgttttctcatgtttggcagctttgcttgacacatcttttatgattgtttgtcc 29338048  T
Q  223 taccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacatct 321  Q
    ||||||||||||||| ||| ||||||    ||||||| |||    | ||||||| ||| |||  || ||||||| ||||||| || ||||||||||||||    
T  29338047 taccgtaaaagccccgaccactaatc----gagtggtaaaacctcgatcaagtccacacatgcatgttttcctcctacccatctgcacaccataacatct 29337952  T
Q  322 gcatgactaagtg 334  Q
    ||| | |||||||    
T  29337951 gcaggcctaagtg 29337939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 334
Target Start/End: Complemental strand, 20693610 - 20693457
Alignment:
Q  181 tttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    |||||||||||||||||||||||| |||||||| || ||  |||| |||||||| |  ||| ||||||||| |||||||||||  ||| ||||||  |||    
T  20693610 tttggccactttgtttgatgcaacctttagggccgtatgttctactgtaaaagctcagacctctaatcccacgagtggtgaaaccctgatcaagttcaca 20693511  T
Q  281 aatgagtgtttcctcttacccatttgtacaccataacatctgcatgactaagtg 334  Q
     |  |   ||||||| ||||||| |||||||||||| ||||||| | |||||||    
T  20693510 tagcatgttttcctcctacccatctgtacaccataatatctgcaggcctaagtg 20693457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 28543413 - 28543554
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| ||||| |||||| | |||  ||| | ||| |||| | |||||||||||||||||||||| |||| || ||||||| ||||| ||| |    
T  28543413 aaagtgtcaaaatcaaatagtataagagcatagtgattttcaaaacacgatttctcatgtttggccactttgcttgacgcgacttttaaggctgcctgtc 28543512  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     ||||||||||| ||  ||| |||||||||  ||||||||||    
T  28543513 ttaccgtaaaagtcctgacctctaatcccacaagtggtgaaa 28543554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 3714953 - 3715042
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    ||||||||||||||||| ||| |||||||||||||| | ||| |||||| | ||||||||||||  ||| |||||||||  |||||||||    
T  3714953 caaaagtgtcaaaaacagatgatataaaaacatgttaattgtgagaacacgttttctcatgtttaaccattttgtttgacacaactttta 3715042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 29338247 - 29338189
Alignment:
Q  46 gtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaac 104  Q
    ||||||||||||||||  ||||| ||||| ||||||||| |||||||||||||||||||    
T  29338247 gtaaacacaacattcatggacctaggagtcatgacattgatgtgcatgaccctttgaac 29338189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 28625968 - 28626062
Alignment:
Q  122 aaagtgtcaaaaacaaatggtat-aaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    ||||||| ||||||||||||||| ||||| ||||||| |||||||||| | |||||| ||||| ||||| ||  |||| ||| |||| |||||||    
T  28625968 aaagtgtaaaaaacaaatggtataaaaaaaatgttgattgtcagaacacgttttctcgtgtttagccaccttacttgacgcagctttaagggctg 28626062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 28625863 - 28625930
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaacttt 107  Q
    ||||| ||||||||||||||||| ||||||  ||| ||||||| |||| ||||||||| ||||||||||    
T  28625863 aatctccgtaaacacaacattcatagacctatgagatatgaca-tgttatgcatgaccttttgaacttt 28625930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 6225108 - 6225191
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaa 203  Q
    ||||||||||||| |||||||  ||| || |||||||| ||||| ||||   ||||||||||||| ||||||| ||||| ||||    
T  6225108 caaaagtgtcaaacacaaatgacatataagcatgttgattgtcacaacaaaatttctcatgtttgaccactttatttgacgcaa 6225191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 28009155 - 28009096
Alignment:
Q  46 gtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    ||||| ||||| ||||  ||||| ||||| |||||||||||||| |||||||||||||||    
T  28009155 gtaaagacaacgttcatggacctaggagtcatgacattgttgtgtatgaccctttgaact 28009096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 7200607 - 7200540
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggcca 188  Q
    |||||||||||||| |||||||  ||||||||||||||| |||  ||||  | |||||||||||||||||    
T  7200607 ccaaaagtgtcaaacacaaatg--ataaaaacatgttgattgtttgaactcgatttctcatgtttggcca 7200540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 3137422 - 3137362
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctt 99  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||| | ||||||||||||    
T  3137422 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccctt 3137362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 13398237 - 13398113
Alignment:
Q  136 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagcc 235  Q
    |||| ||||||||| ||||||| |||| ||||||||||| |||| |||| ||  |||  ||||| |||||| |||   |||||   |||||||||||| |    
T  13398237 aaatagtataaaaatatgttgattgtcggaacatgctttttcatatttgaccgttttacttgatacaacttgtagaattgtctattctaccgtaaaagtc 13398138  T
Q  236 ccaacccctaatcccatgagtggtg 260  Q
     ||||| ||||||||| || |||||    
T  13398137 tcaaccgctaatcccaggaatggtg 13398113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 34644595 - 34644745
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || ||||||||||||||||||||||||||| ||||| |  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  34644595 aggaagccgaaagtgtcaaaaacaaatggtataaaagcatgtaggttgtcagaacacgctttctcatgtttggccactttgtttgacgcaacttttaggg 34644694  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     ||  || ||||||||||||||||| |||||||| ||||  ||||||||||    
T  34644695 ttgcttgtcctaccgtaaaagccccgacccctaaacccacaagtggtgaaa 34644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 280
Target Start/End: Original strand, 19035476 - 19035643
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||||||  |||||||||||  ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||| ||| |||||||||    
T  19035476 aggaaaccgtaagtgtcaaaagtaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcagcttttaggg 19035575  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    ||| ||||||||| |||||||  || || ||||||||||  | ||||||||| |  ||||||||||||    
T  19035576 ctgcctgccctacggtaaaaggtccgacacctaatcccacaactggtgaaatcccagtcaagtctaca 19035643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 130 - 319
Target Start/End: Complemental strand, 50161478 - 50161288
Alignment:
Q  130 aaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgta 229  Q
    ||||| ||||| ||||||| |||||||| ||| |||||| ||||||||||||||| |||||||| |||| ||||||||||||| |||||| |||||||||    
T  50161478 aaaaaaaaatgatataaaagcatgttgattgtgagaacacgctttctcatgtttgtccactttgcttgacgcaacttttagggttgtctgtcctaccgta 50161379  T
Q  230 aaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacat 319  Q
    |||| | || |||||||| ||| |||||||||||||  ||| ||||| ||| |||  || ||| ||||||||||   ||||||||||||||    
T  50161378 aaagtctcagcccctaattccacgagtggtgaaatatcggttaagtccacacatgcatgtttttctcttacccaaccgtacaccataacat 50161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 324
Target Start/End: Complemental strand, 28041205 - 28040993
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||| |||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||| ||   |||||| |    
T  28041205 aggaaaccgaaagtgtcaaaagcaaatggtataaaaacctgttgattgtcagaacacactttctcatgtttggccactttgtttgacgcggattttagag 28041106  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||| ||  ||||| |||||||  || || ||||||||||  ||| ||||||  |  |||||||||||| | |  || ||||| | ||||||| |||||||    
T  28041105 ctgcctatcctacggtaaaaggtccgacacctaatcccacaagtagtgaaaccccagtcaagtctacacaagcatgttttccacctacccatctgtacac 28041006  T
Q  312 cataacatctgca 324  Q
    |||||||||||||    
T  28041005 cataacatctgca 28040993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 320
Target Start/End: Complemental strand, 29169871 - 29169664
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| |||||||||| | |||||| ||||||||||| ||  ||||  ||||||| ||||    
T  29169871 aggaaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgttttctcgtgtttggccaccttacttgacacaactttaaggg 29169772  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||||||| ||||| ||||||| ||| || ||||||||||  ||||||||||  |  |||||||||||| |||  || ||||||| |||| ||  ||||||    
T  29169771 ctgtctgtcctacggtaaaaggcccgacacctaatccca-aagtggtgaaaccccagtcaagtctacacatgcatgttttcctcctacctatccgtacac 29169673  T
Q  312 cataacatc 320  Q
    |||||||||    
T  29169672 cataacatc 29169664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 25375911 - 25375751
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||  || |||||||| ||| |||||||||| ||||||| |||| ||||||||| | |    
T  25375911 aggaagccaaaagtgtcaatagcaaatggtataaaaacatgttgatggtaagaacatgttttgtcatgtttggtcactttgcttgacgcaacttttggag 25375812  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaa 273  Q
     |||||| |||||||||||||| |  ||||||||||| | |||| ||||||  ||||||||    
T  25375811 ttgtctgtcctaccgtaaaagctctgacccctaatccgacgagtagtgaaaccctggtcaa 25375751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 42919890 - 42920039
Alignment:
Q  114 ggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggc 213  Q
    ||||| |||||||||||||| || |||  ||||||||||||||| ||| |||||| | |||||||||||||||| ||||||||||||||||||||||||     
T  42919890 ggaaatcaaaagtgtcaaaagcagatgacataaaaacatgttgattgtgagaacacg-tttctcatgtttggccgctttgtttgatgcaacttttagggt 42919988  T
Q  214 tgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaat 264  Q
    ||| || |||| | ||||||| || |||| |||||||| |||| |||||||    
T  42919989 tgtttgtcctatcataaaagctccgacccgtaatcccacgagtagtgaaat 42920039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 45659726 - 45659498
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttt-agg 211  Q
    |||||| | |||||||||||| |||||||||||||| |||||||| |||||||||| |||||||| ||||||||||| ||  |||| ||| ||||| |||    
T  45659726 aggaaatcgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcgtgtttggccaccttacttgacgcagcttttaagg 45659627  T
Q  212 gctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtaca 310  Q
    ||||  || ||||| ||||||| ||| |  ||||||||||  ||||||||||  |  |||||||||||  |||  || ||||||| ||||||| ||||||    
T  45659626 gctgcatgtcctacggtaaaaggcccgatacctaatcccacaagtggtgaaaccccagtcaagtctacgcatgcatgttttcctcctacccatctgtaca 45659527  T
Q  311 ccataacatctgcatgactaagtgatgat 339  Q
    | ||||||| |||||| || |||| ||||    
T  45659526 ctataacatgtgcatgcctgagtgttgat 45659498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 31737392 - 31737281
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||| |||| ||  |||||||||| || |  |    
T  31737392 aaagtgtcaaaaacaaatggtataaaagcatgttgattgtcagaatatgttttctcatgtttggccactttgcttgacgccgcttttagggccgtttatc 31737293  T
Q  222 ctaccgtaaaag 233  Q
     |||||||||||    
T  31737292 ttaccgtaaaag 31737281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 2764517 - 2764658
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||||||||||  |||||| |||||| |||||||| |||| ||||| | ||||||||||||| ||||||||| |||  ||||||||||| ||| ||  |    
T  2764517 aaagtgtcaaaagaaaatggcataaaagcatgttgattgtcggaacacgttttctcatgtttgaccactttgtctgacacaacttttaggactgcctatc 2764616  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||| ||||||| ||||||||||| ||||  ||||||||||    
T  2764617 ctaccataaaagcaccaacccctaaacccacaagtggtgaaa 2764658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 112 - 319
Target Start/End: Original strand, 37200011 - 37200217
Alignment:
Q  112 aaggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagg 211  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||| ||||||| |||||||  |||| | |||||||| |    
T  37200011 aaggaagccaaaagtgt-aaaaacaaatggtataaaaacatattgattgttagcacatgctttcttatgtttgaccactttacttgacgtaacttttatg 37200109  T
Q  212 gctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtaca 310  Q
    ||||  || ||||  |||||||| ||   || |||||||| ||||||||||| |   |||||||| ||| |||  || |||||||||||||||| ||||     
T  37200110 gctgcatgtcctattgtaaaagctccggtccttaatcccacgagtggtgaaacatcagtcaagtc-acacatgcatgttttcctcttacccattggtacc 37200208  T
Q  311 ccataacat 319  Q
    |||||||||    
T  37200209 ccataacat 37200217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 21473042 - 21473107
Alignment:
Q  123 aagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggcca 188  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21473042 aagtgtcaaaagcaaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttggcca 21473107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 20259873 - 20259774
Alignment:
Q  115 gaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct 214  Q
    |||||| |||||||||| || |||||||||||||||||||||| |||||||||| |||||||||| |||  |||||||| |||| | | |||||||||||    
T  20259873 gaaaccgaaagtgtcaacaataaatggtataaaaacatgttgattgtcagaacacgctttctcatttttaaccactttgcttgacgtagcttttagggct 20259774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 322
Target Start/End: Complemental strand, 4862067 - 4861857
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| | |||||||||||| ||||| ||||||||  ||||||  |||||||| | ||||||||||||||| ||| |||  |||| |||||||||| ||    
T  4862067 aggaaatcgaaagtgtcaaaagcaaattgtataaaagtatgttgcttgtcagaagacgctttctcatgtttgaccattttacttgacgcaacttttaagg 4861968  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||||||| |||||| |||| | |   ||||||||||| |  |||||||||| ||  ||||| || ||| |||  || ||| ||| |||||||  ||||||    
T  4861967 ctgtctgtcctaccataaatgtcaagacccctaatccaacaagtggtgaaacaccagtcaaatccacacatgcatgtttttctcctacccatccgtacac 4861868  T
Q  312 cataacatctg 322  Q
    |||||||||||    
T  4861867 cataacatctg 4861857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 22346924 - 22347022
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagg 211  Q
    |||||||| |||||||||||| |||| ||||||||  |||||||| |||||||||| |||||||||| ||||||||||||| ||||   ||||||||||    
T  22346924 aggaaaccgaaagtgtcaaaagcaaaaggtataaacgcatgttgattgtcagaacacgctttctcatatttggccactttgcttgacataacttttagg 22347022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 16500070 - 16500187
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    |||||||||||||| ||||| |||||||  |||||| | ||| |||||||| ||||| || ||||||||||||   ||| ||||||||||||  ||||||    
T  16500070 caaaagtgtcaaaagcaaatagtataaaggcatgttaattgttagaacatgttttcttatatttggccactttacgtgacgcaacttttaggattgtctg 16500169  T
Q  220 ccctaccgtaaaagcccc 237  Q
     |||||||||||||||||    
T  16500170 tcctaccgtaaaagcccc 16500187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 2898731 - 2898833
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgct----ttctcatgtttggccactttgtttgatgcaactttt 208  Q
    |||||||| ||||| |||||| |||||||||||||||| | |||| |||||||||| |||    ||||||||||||||||||||| |||||||| |||||    
T  2898731 aggaaaccgaaagtatcaaaagcaaatggtataaaaac-tattgattgtcagaacacgctcactttctcatgtttggccactttgcttgatgcatctttt 2898829  T
Q  209 aggg 212  Q
    ||||    
T  2898830 aggg 2898833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 36486918 - 36487011
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    |||||||||||||||||| |||||  |||||||| || |||| ||||| |||| |||||||||| |||| |||||||  ||||||||| |||||    
T  36486918 aaaccaaaagtgtcaaaagcaaattatataaaaagatattgattgtcaaaacacgctttctcatatttgaccactttacttgatgcaattttta 36487011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 38731546 - 38731607
Alignment:
Q  44 tcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||||||||||| |||||  ||||| ||||| |||||||| |||||||||||||||||||||    
T  38731546 tcgtaaacacaatattcatggacctaggagtcatgacattattgtgcatgaccctttgaact 38731607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 23043929 - 23044005
Alignment:
Q  136 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||||||||||| |||||||| ||| || || || |||||||| ||||||||||||| |||||||| |||| ||||    
T  23043929 aaatggtataaaagcatgttgattgtgagtacttgttttctcatatttggccactttgcttgatgcagctttgaggg 23044005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 263
Target Start/End: Complemental strand, 37932264 - 37932146
Alignment:
Q  144 taaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccc 243  Q
    |||||||| ||||| ||||||||||  ||||||| | |||| ||| |||| ||||  ||||||||||||||||||| | ||| |||||||||    ||||    
T  37932264 taaaaacacgttgattgtcagaacac-ctttctcgtatttgaccattttgcttgacacaacttttagggctgtctgtcttactgtaaaagccttggcccc 37932166  T
Q  244 taatcccatgagtggtgaaa 263  Q
    ||||||||  ||||||||||    
T  37932165 taatcccacaagtggtgaaa 37932146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 24177589 - 24177540
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtc 162  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  24177589 aggaaaccgaaactgtcaaaaacaaatggtataaaaatatgttgattgtc 24177540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 50314694 - 50314613
Alignment:
Q  121 aaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgca 202  Q
    |||| ||||||||  ||||||||||||| |||||||| ||| |||||| | ||| ||||||||| |||||||| || |||||    
T  50314694 aaaaatgtcaaaagtaaatggtataaaagcatgttgattgtgagaacaagttttgtcatgtttgaccactttgctttatgca 50314613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 35387710 - 35387643
Alignment:
Q  141 gtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttt 208  Q
    |||||||| | ||||||  |||||||||  |||| |||||||||||||||||| ||||||||| ||||    
T  35387710 gtataaaagcttgttgatcgtcagaacacactttttcatgtttggccactttgcttgatgcaaatttt 35387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 7213279 - 7213341
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtat-aaaaacatgttgactgtcagaacatgcttt 174  Q
    |||||||| ||||||||||||| ||||| ||| ||||||||||| | | ||||||||||||||    
T  7213279 aggaaaccgaaagtgtcaaaaataaatgatataaaaaacatgttaattatcagaacatgcttt 7213341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 19035424 - 19035458
Alignment:
Q  149 acatgttgactgtcagaacatgctttctcatgttt 183  Q
    ||||||||| |||||||||||||||||||||||||    
T  19035424 acatgttgattgtcagaacatgctttctcatgttt 19035458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 47459711 - 47459753
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgtt 155  Q
    ||||| |||||||| |||||| |||||||||||||||||||||    
T  47459711 aggaagccaaaagtatcaaaagcaaatggtataaaaacatgtt 47459753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 7e-40; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 35740064 - 35739838
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||||| | ||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||| || |  ||||||||||||    
T  35740064 aggaaactgaaagtgtcaaaagctaattgtataaaaacatgttgattgtcagaacccgctttctcatgtttggccactttgcttaacacaacttttaggg 35739965  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
     |||||| ||||||||||||| ||| | || ||||||||  ||||||||||  |  |||||||| ||| |||  || ||||||| ||||||||  |||||    
T  35739964 atgtctgtcctaccgtaaaaggcccga-ccttaatcccactagtggtgaaaccccagtcaagtccacacatgcatgttttcctcctacccattcatacac 35739866  T
Q  312 cataacatctgcatgactaagtgatgat 339  Q
    ||||||||||||||| ||||||| ||||    
T  35739865 cataacatctgcatgcctaagtgttgat 35739838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 38815332 - 38815471
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||  |   |||||||||||||||| |    
T  38815332 aaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgtttggcgtggcttttagggctgtctgtc 38815431  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtga 261  Q
    ||||| |||||||||| |||||||||||||  ||||||||    
T  38815432 ctaccataaaagccccgacccctaatcccacaagtggtga 38815471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 39434703 - 39434846
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||  |||    
T  39434703 caaaagtgtcaaaaacaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaacttttagagcttcctg 39434802  T
Q  220 ccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     ||||| ||||||||| | |||||||| ||||  ||||||||||    
T  39434803 tcctactgtaaaagcctccacccctaaacccacaagtggtgaaa 39434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 500256 - 500406
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| ||| ||||||||  ||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||| |||| |||||||||||||    
T  500256 aggaaaccgaaaatgtcaaaagtaaatggtataaaagcatgttgattgtcagaacacgttttctcatgtttggccactttgcttgacgcaacttttaggg 500355  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||| | ||||||||||||| ||| || ||||||||||  ||||||||||    
T  500356 ctgtcggtcctaccgtaaaaggcccgacacctaatcccacaagtggtgaaa 500406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 335
Target Start/End: Complemental strand, 25021892 - 25021669
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| |||||| ||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||| |||  |||||||| ||||  ||||||||||||    
T  25021892 aggaagccaaaaatgtcaaaagaaaatggtataaaaacatgttgattgtgagaacacactttctcatatttcaccactttgcttgacacaacttttaggg 25021793  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    |||| || | ||| |||||| |  | |||||||||||||  ||||||||||  | ||||||||| ||| |||  || ||||||| |||||||  ||||||    
T  25021792 ctgtatgtcatactgtaaaaacatcgacccctaatcccacaagtggtgaaactccggtcaagtccacacatgcatgttttcctcctacccatccgtacac 25021693  T
Q  312 cataacatctgcatgactaagtga 335  Q
    ||||||||||||| | ||||||||    
T  25021692 cataacatctgcaggcctaagtga 25021669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 3187998 - 3188148
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttag-g 211  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||| |||||||||| |||| ||||||||| ||||||||| |||||||||||||||| |    
T  3187998 aggaagccgaaagtttcaaaagcaaatggtataaaagcatgttgattgtcagaacacgcttcctcatgttttgccactttgcttgatgcaacttttagag 3188097  T
Q  212 gctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||  ||| ||||||||||||||||| | |||||| ||||  ||||||||||    
T  3188098 gcttcctgtcctaccgtaaaagccccga-ccctaaacccacaagtggtgaaa 3188148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 280
Target Start/End: Original strand, 24125057 - 24125224
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||| |||| |||||||| |||||||||    
T  24125057 aggaaatcaaaattgtcaaaagcaaatggtataaaagcatgttgattgtcagagcacgctttctcatgtttggccattttgcttgatgcagcttttaggg 24125156  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    |||  || || |||||||||| | | || | ||||||||  ||||||||||  |  ||||||||||||    
T  24125157 ctgcttgtcccaccgtaaaaggcacgacgcataatcccacaagtggtgaaaccccagtcaagtctaca 24125224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 233
Target Start/End: Original strand, 6592604 - 6592724
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||||| |||||||| ||||| |||||||| ||| |||||| |||||||||||||||||||||||| |||| ||| |||||| |     
T  6592604 aggaaactgaaagtgtcaaaagcaaatggtttaaaatcatgttgattgtgagaacacgctttctcatgtttggccactttgcttgacgcagcttttacga 6592703  T
Q  213 ctgtctgccctaccgtaaaag 233  Q
    ||||||  |||| ||||||||    
T  6592704 ctgtctatcctatcgtaaaag 6592724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 119 - 322
Target Start/End: Original strand, 8619849 - 8620047
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtct 218  Q
    |||||| ||| ||||||||||||||||||| || ||||| ||||| || | ||||| ||||||||| ||| |||  |||| |||||||||||||||||||    
T  8619849 ccaaaaatgttaaaaacaaatggtataaaagcacgttgattgtcaaaatacgctttttcatgtttgaccattttacttgacgcaacttttagggctgtct 8619948  T
Q  219 gccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgtttcctcttacccatttgtacaccataaca 318  Q
    |  ||| |||||||| | | | | |||||||||  ||||||||||  |  |||||||  ||| ||     |||||||||||||||| |||||||||||||    
T  8619949 gttctatcgtaaaagtcacgatctctaatcccacaagtggtgaaaccccagtcaagttcacacat-----tttcctcttacccattcgtacaccataaca 8620043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 10189572 - 10189707
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| |||||| |||||||  |||||| |||||||||||||||| ||||||||||||||||||| |||||| | |||||  |||  ||||||||||||     
T  10189572 aggaagccaaaaatgtcaaatgcaaatgatataaaaacatgttgattgtcagaacatgctttctcttgtttgactactttaattggcgcaacttttagga 10189671  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatc 248  Q
     ||| || |||||| ||||||||  |||||||||||    
T  10189672 atgtatgtcctaccataaaagccttaacccctaatc 10189707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 4073571 - 4073685
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    |||||||||||||  ||||| |||||||| |||||||| ||  | |||| | |||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  4073571 caaaagtgtcaaatgcaaattgtataaaatcatgttgattggtaaaacacgttttctcttgtttgaccactttgtttgatgcaacttttagggttgtctg 4073670  T
Q  220 ccctaccgtaaaagc 234  Q
      | |||||||||||    
T  4073671 ttccaccgtaaaagc 4073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 8882371 - 8882441
Alignment:
Q  128 tcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    ||||||||||||||| ||||| ||| |||| |||||||||| |||||||||||||||||||||||| ||||    
T  8882371 tcaaaaacaaatggtttaaaagcatattgattgtcagaacacgctttctcatgtttggccactttgcttga 8882441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 28196228 - 28196324
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgt 216  Q
    |||||||||||||||||||||||||||||||||||| | | ||| ||||  ||||||||||||| ||| ||||  ||||||||  ||||||| ||||    
T  28196228 caaaagtgtcaaaaacaaatggtataaaaacatgtttattatcataacacactttctcatgtttagccgctttacttgatgcagtttttaggactgt 28196324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 37517163 - 37517243
Alignment:
Q  153 gttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaag 233  Q
    ||||| |||| |||||  ||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||| |||||||    
T  37517163 gttgattgtcggaacaccctttctcatgtttggccactttgcttgatgcagcttttagagctgtctgtcctacggtaaaag 37517243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 25021982 - 25021919
Alignment:
Q  46 gtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaactttgt 109  Q
    |||||||||||||||   ||||| |||| |||||||||||||||||||||||||||||||||||    
T  25021982 gtaaacacaacattcctggacctaggagatatgacattgttgtgcatgaccctttgaactttgt 25021919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 42922273 - 42922103
Alignment:
Q  44 tcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaactttgtagaaggaaaccaaaagtgtcaaaaacaaatggta 143  Q
    |||||||||||| |||||  ||||  ||||||||||||||||||||||| ||  ||| |||| | |   ||||| ||||||||||||||  |||||| |     
T  42922273 tcgtaaacacaatattcatggaccgaggagttatgacattgttgtgcataact-tttaaactctatgttaggaagccaaaagtgtcaaaggcaaatgatt 42922175  T
Q  144 taaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    ||||| ||| |||| ||||| |||| | |||||||  |||| ||| ||||||||| |||||||||| |||||    
T  42922174 taaaagcattttgattgtcaaaacacgttttctcaaatttgaccattttgtttgacgcaacttttatggctg 42922103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 6618313 - 6618409
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    |||||||  |||||||||||| |||||||| ||||| |||||||| ||| |||||| ||||||||||||||  | ||| | ||||| ||||||||||    
T  6618313 aggaaactgaaagtgtcaaaagcaaatggtttaaaatcatgttgattgtgagaacacgctttctcatgtttaactactctatttgacgcaactttta 6618409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 11611275 - 11611199
Alignment:
Q  160 gtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccc 236  Q
    |||||||||||||||||||| |||||||||||| |||||  |||||||||||| |||||  | || |||||||||||    
T  11611275 gtcagaacatgctttctcatatttggccactttatttgacacaacttttagggatgtctatcttatcgtaaaagccc 11611199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 10556361 - 10556283
Alignment:
Q  123 aagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgc 201  Q
    |||||||||| |||| |  |||||||||||||||| | |||||| ||| ||||||||||||| ||||||| ||||||||    
T  10556361 aagtgtcaaatacaatttatataaaaacatgttgattttcagaatatgttttctcatgtttgaccactttctttgatgc 10556283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 38815226 - 38815292
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||| | ||||||||||||||||||    
T  38815226 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccctttgaact 38815292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 4699919 - 4700002
Alignment:
Q  134 acaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtct 218  Q
    ||||||||| |||||||||||| | ||| |||||| ||||  |||||||||||||||||| ||||  ||||||| |||| |||||    
T  4699919 acaaatggtgtaaaaacatgttaattgtgagaacacgctta-tcatgtttggccactttgcttgacacaactttgagggttgtct 4700002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 43824017 - 43824056
Alignment:
Q  112 aaggaaaccaaaagtgtcaaaaacaaatggtataaaaaca 151  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  43824017 aaggaagccaaaagtgtcaaaagcaaatggtataaaaaca 43824056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 39671232 - 39671170
Alignment:
Q  130 aaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccacttt 192  Q
    ||||| |||| ||||||||||||||| | ||||| |||| ||||||||  |||||||||||||    
T  39671232 aaaaataaattgtataaaaacatgttaattgtcaaaacacgctttctctggtttggccacttt 39671170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 8390234 - 8390291
Alignment:
Q  178 atgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagcc 235  Q
    |||||||| |||||||||| | |||| |||||||| ||||||||||| | ||||||||    
T  8390234 atgtttggtcactttgttttacgcaatttttagggttgtctgccctatcataaaagcc 8390291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 28517358 - 28517215
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    |||||||||||||| ||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||| |||| ||| ||||||||| ||||||    
T  28517358 caaaagtgtcaaaagcaaatggtataaaaacatgttgattgtctaaacacgctttctcatgtttggccactttgcttgacgcagcttttagggttgtctg 28517259  T
Q  220 ccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     ||||| ||||||||||| |||||||| ||||  ||||||||||    
T  28517258 tcctactgtaaaagcccccacccctaaacccacaagtggtgaaa 28517215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 320
Target Start/End: Original strand, 4501296 - 4501495
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||| |||||  ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||| || |    
T  4501296 aaagtgtcaaaagcaaattatataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgtttgacgcagcttttagggttgtttgtc 4501395  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacatc 320  Q
    |||| ||||||| ||| || ||||||||||  ||||||||||  |  |||||||||||| |||  || ||||||| |||| ||  |||||||||||||||    
T  4501396 ctacggtaaaaggcccgacacctaatcccacaagtggtgaaaccccagtcaagtctacacatgcatgttttcctcctacctatccgtacaccataacatc 4501495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 263
Target Start/End: Complemental strand, 21326916 - 21326766
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| | |||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||| ||  |||||||||    
T  21326916 aggaaatcgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcggcttttaggg 21326817  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||| || ||||| |||||||  || || ||||||||||  ||||||||||    
T  21326816 ctgtttgtcctacggtaaaaggtccgacacctaatcccacaagtggtgaaa 21326766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 339
Target Start/End: Original strand, 43856903 - 43857130
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||||||| |||||||| ||||| |||||||  |||||||| ||||| |||| |||||||||||| | ||||||||| |||| ||| ||||||  |    
T  43856903 aggaaaccaaaaatgtcaaaagcaaattgtataaacgcatgttgattgtcaaaacacgctttctcatgtctagccactttgattgacgcatcttttaatg 43857002  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
     |||||| ||||| ||||||||||| |||||||||||||  ||||||||||  |  |||||||| ||  |||  || ||| ||| |||||||  ||||||    
T  43857003 ttgtctgtcctactgtaaaagccccgacccctaatcccacaagtggtgaaacccccgtcaagtccacgcatgtatgtttttctcctacccatccgtacac 43857102  T
Q  312 cataacatctgcatgactaagtgatgat 339  Q
    ||||||||||||| | ||||||| ||||    
T  43857103 cataacatctgcaggcctaagtgttgat 43857130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 114 - 320
Target Start/End: Complemental strand, 45613919 - 45613712
Alignment:
Q  114 ggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggc 213  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||  ||||| | ||||||| ||| ||  |||| |||||||||||||     
T  45613919 ggaaaccgaaagtgtcaaaatcaaatggtataaaaacatgttgattgtcagaacacactttcccgtgtttggtcaccttacttgacgcaacttttagggt 45613820  T
Q  214 tgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacacc 312  Q
    |||||| ||||| | ||||| ||| || |||||||| |  ||||||||||  |  |||||||||||| |||  || ||||||| |||||||| ||||| |    
T  45613819 tgtctgtcctacggaaaaaggcccgacacctaatcctacaagtggtgaaaccccagtcaagtctacacatgcatgttttcctcctacccattcgtacatc 45613720  T
Q  313 ataacatc 320  Q
    ||||||||    
T  45613719 ataacatc 45613712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 32584630 - 32584768
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||||| |||||||| ||||| ||| |||| |||||||||| | ||||||||||||| |||||||||||||||||| ||||||||    
T  32584630 aggaaacataaagtgtcaaaagcaaatggtgtaaaagcatcttgattgtcagaacacgttttctcatgtttgaccactttgtttgatgcaatttttaggg 32584729  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
     ||  || |||||||||||| |||| |||||||||||||    
T  32584730 ttgcatgtcctaccgtaaaatccccgacccctaatccca 32584768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 280
Target Start/End: Original strand, 982981 - 983145
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    ||||| ||||| |||||| |||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||| |||| ||| |||||| |||||    
T  982981 aaaccgaaagtatcaaaagcaaatggtataaaagcatgttgattgtcagaacacgatttctcatgtttggccactttgcttgacgcagcttttatggctg 983080  T
Q  216 tctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
     ||| |||||  ||||||  || || ||||||||||  |||||| |||  || ||||||||||||    
T  983081 cctgtcctacaataaaaggtcccacacctaatcccacaagtggttaaaccctagtcaagtctaca 983145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 320
Target Start/End: Original strand, 5825311 - 5825508
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||||||||||  |||||||||||||||||||||| ||||| |||| || || |||||||||  ||||||| |||||||| |||||||||||  ||| |    
T  5825311 aaagtgtcaaaagtaaatggtataaaaacatgttgattgtcataacacgcattgtcatgtttg--cactttgcttgatgcagcttttagggcttcctgtc 5825408  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacatc 320  Q
    || ||||||||||| | |||||||| ||||  ||||||||||  |  |||||||| ||| |||  || |||||||  ||||||| |||||||||||||||    
T  5825409 ctgccgtaaaagcctcgacccctaaacccacaagtggtgaaaccccagtcaagtccacacatgcatgttttcctccaacccattcgtacaccataacatc 5825508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 19277322 - 19277434
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||| |||||| |||| ||| ||||||||     
T  19277322 aggaaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggctactttgcttgacgcagcttttagga 19277421  T
Q  213 ctgtctgccctac 225  Q
    ||| ||| |||||    
T  19277422 ctgcctgtcctac 19277434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 27521500 - 27521651
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||||||||||||||||  |||| |||||||  |||||||| |||||||||| | ||||||||||||| ||||||||||| | |||||||||| ||    
T  27521500 aggaaaccaaaagtgtcaaaagtaaattgtataaatgcatgttgattgtcagaacacgttttctcatgtttgaccactttgtttaacgcaacttttaagg 27521599  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaat 264  Q
     ||  || ||||||||||||| ||| || ||||||||||  | |||||||||    
T  27521600 gtgcatgtcctaccgtaaaaggcccgacacctaatcccacaaatggtgaaat 27521651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 2904394 - 2904544
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| |||||  ||||| ||||||||| ||||||| |||||||| |||| ||||||||||||||||||||| | | |||| |||| | ||||||||||     
T  2904394 aggaagccaaacatgtcacaaacaaatgatataaaatcatgttgattgtcggaacatgctttctcatgtttgactattttgcttgacgtaacttttagga 2904493  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||||  ||||||||||| ||| || ||||||| | ||  ||||||||||    
T  2904494 ctgtctatcctaccgtaaatgcctcatcccctaacctcacaagtggtgaaa 2904544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 120 - 280
Target Start/End: Original strand, 3676675 - 3676836
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct-gtct 218  Q
    |||||||||||||| |||||||||||||| ||| ||||  || |||||| ||||||| ||||||| |||||||| |||| ||| ||||||||||| | ||    
T  3676675 caaaagtgtcaaaagcaaatggtataaaagcatattgatagtaagaacacgctttctgatgtttgaccactttgcttgacgcagcttttagggctggcct 3676774  T
Q  219 gccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    | ||||| |||||||  || || ||||||||||  ||||||||||  |  ||||||||||||    
T  3676775 gtcctacggtaaaaggaccgacacctaatcccacaagtggtgaaaccccagtcaagtctaca 3676836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 30216136 - 30216040
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||| |||| ||| |||| |||| ||| ||||||    
T  30216136 aggaaaccgaaagtgtcaaaagcaaatggtataaaaacatgttgattgtcaaaacacgctttctcatatttgaccattttgcttgacgcagctttta 30216040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 22198015 - 22198150
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||| |||  |||||  ||||||||||||||| ||||||| |||| ||  |||||||||    
T  22198015 aggaaaccgaaagtgacaaaagcaaatggtataaaaacatgttgattgttggaacacactttctcatgtttggtcactttgcttgacgccgcttttaggg 22198114  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatc 248  Q
    |||   | |||||| |||||| ||| || |||||||    
T  22198115 ctgcgcgtcctaccataaaaggcccgacacctaatc 22198150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 22239806 - 22239671
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||| |||  |||||  ||||||||||||||| ||||||| |||| ||  |||||||||    
T  22239806 aggaaaccgaaagtgacaaaagcaaatggtataaaaacatgttgattgttggaacacactttctcatgtttggtcactttgcttgacgccgcttttaggg 22239707  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatc 248  Q
    |||   | |||||| |||||| ||| || |||||||    
T  22239706 ctgcgcgtcctaccataaaaggcccgacacctaatc 22239671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 24527618 - 24527756
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||||| |||||||||||||| |||||||| |||||||||| | ||||||||||||  |||||||  ||||  |  |||||||||    
T  24527618 aggaaactgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgttttctcatgttttcccactttacttgacactgcttttaggg 24527717  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
    ||| ||| ||||| |||||||  || || ||||||||||    
T  24527718 ctgcctgtcctacggtaaaaggtccgacacctaatccca 24527756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 42295262 - 42295177
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    |||||||| ||||| | |||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||| ||||    
T  42295262 aggaaaccgaaagtataaaaaacaaatggtataaaaacatgttgattgtcagaagaagctttcttatgtttggccattttgcttga 42295177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 10905151 - 10905246
Alignment:
Q  117 aaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggc 213  Q
    ||||||||||||||||| |||||||||||||  |||||||| ||||||||||   |||||||| ||||||||||||| |||| ||| ||||||||||    
T  10905151 aaccaaaagtgtcaaaagcaaatggtataaag-catgttgagtgtcagaacactttttctcatatttggccactttgcttgacgcagcttttagggc 10905246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 40726549 - 40726478
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttg 193  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||   ||| | ||||||||||||||||    
T  40726549 aaagtgtcaaaaacaaatggtataaaaacatgttgattgtcagaacacattttattatgtttggccactttg 40726478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 257
Target Start/End: Complemental strand, 9281201 - 9281066
Alignment:
Q  121 aaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgc 220  Q
    |||| |||||||  ||||| |||||||| |||||||| ||| |||||| |||||||||||||| || | |||| |||||||| ||||||||| ||||||     
T  9281201 aaaaatgtcaaatccaaatagtataaaagcatgttgattgttagaacacgctttctcatgttt-gctagtttgcttgatgcagcttttagggttgtctgt 9281103  T
Q  221 cctaccgtaaaagccccaacccctaatcccatgagtg 257  Q
    ||||| |||||| ||| | | | |||||||| |||||    
T  9281102 cctactgtaaaaaccctatcacataatcccacgagtg 9281066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 257
Target Start/End: Complemental strand, 9292172 - 9292037
Alignment:
Q  121 aaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgc 220  Q
    |||| |||||||  ||||| |||||||| |||||||| ||| |||||| |||||||||||||| || | |||| |||||||| ||||||||| ||||||     
T  9292172 aaaaatgtcaaatccaaatagtataaaagcatgttgattgttagaacacgctttctcatgttt-gctagtttgcttgatgcagcttttagggttgtctgt 9292074  T
Q  221 cctaccgtaaaagccccaacccctaatcccatgagtg 257  Q
    ||||| |||||| ||| | | | |||||||| |||||    
T  9292073 cctactgtaaaaaccctatcacataatcccacgagtg 9292037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 33202493 - 33202405
Alignment:
Q  163 agaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
    |||||| || ||||||||||||||||||| ||| || |||||||  |||||| |||  ||||| |||||||||||||||||||||||||    
T  33202493 agaacacgcgttctcatgtttggccacttagttggacgcaacttccagggctttctatcctactgtaaaagccccaacccctaatccca 33202405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 34067939 - 34067820
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||| ||||| ||||  ||||||||||||||| ||||| | |||| || ||||  ||||    
T  34067939 aggaaaccaaaagtgtcaaatacaaatggcatagaaa-atgttgattgtcaaaacacactttctcatgtttggtcacttggcttgaagcgacttcgaggg 34067841  T
Q  213 ctgtctgccctaccgtaaaag 233  Q
    ||||||| || || |||||||    
T  34067840 ctgtctgtcccacagtaaaag 34067820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 43856811 - 43856872
Alignment:
Q  44 tcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    ||||||||| ||||||||  ||||| ||||| ||||||||||||||||||||||||||||||    
T  43856811 tcgtaaacataacattcatggacctaggagtcatgacattgttgtgcatgaccctttgaact 43856872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 25186999 - 25186876
Alignment:
Q  128 tcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccg 227  Q
    |||||| ||||||||| ||||||||||||| | || ||||| ||||||||||||| | |||||||  ||||  |||||||||||| | | || ||||| |    
T  25186999 tcaaaagcaaatggtagaaaaacatgttgattatcggaacacgctttctcatgttagaccactttacttgacacaacttttagggttttatgtcctacgg 25186900  T
Q  228 taaaagccccaacccctaatccca 251  Q
    ||||||  || || ||||||||||    
T  25186899 taaaaggtccgacacctaatccca 25186876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 34772819 - 34772946
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||| |||||| |||||||||||||||||| || | |||| |||||  ||||||||| |||||| |||||| ||||  |||||||||| |||| ||  |    
T  34772819 aaagtttcaaaagcaaatggtataaaaacatattaattgtccgaacacactttctcatatttggctactttgattga--caacttttagagctgcctatc 34772916  T
Q  222 ctaccgtaaaagccccaacccctaatccca 251  Q
     ||||||||||  |||||| | ||||||||    
T  34772917 ataccgtaaaaagcccaacacataatccca 34772946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 1249667 - 1249735
Alignment:
Q  165 aacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaag 233  Q
    |||| ||||||||||||||| ||||||| ||||| |||  ||||||||||||||  |||||||||||||    
T  1249667 aacacgctttctcatgtttgaccactttatttgacgcaggttttagggctgtctatcctaccgtaaaag 1249735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 321
Target Start/End: Original strand, 38839360 - 38839564
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatg----ttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    |||||||||||||| |||||  ||||||||||||    |||| || || |||||||||||||||||||| | | ||| ||| | ||||||||||| | ||    
T  38839360 caaaagtgtcaaaagcaaattatataaaaacatgcatgttgattgacataacatgctttctcatgtttgacgattttattttacgcaacttttagagttg 38839459  T
Q  216 tctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgtttcctcttacccatttgtacaccata 315  Q
    ||||  || ||||||||| | | ||||| |||||||  | || ||||||    |||||||| ||| |||  ||||| ||||||| |||  ||||||||||    
T  38839460 tctgttcttccgtaaaagacacgaccccaaatccca-caatgatgaaatctcagtcaagtccacacatgcatgttttctcttacacatccgtacaccata 38839558  T
Q  316 acatct 321  Q
    ||||||    
T  38839559 acatct 38839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 30216228 - 30216165
Alignment:
Q  44 tcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaacttt 107  Q
    |||| ||||||||||||| |||||| |||| |||||||||| | ||||||||| ||||||||||    
T  30216228 tcgtgaacacaacattcatagacctaggagatatgacattgctatgcatgaccatttgaacttt 30216165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 27521403 - 27521469
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| |||||||||||||||||| |||| | ||||  ||||||||||| ||||||||| ||||||||    
T  27521403 aatcctcgtaaacacaacattcatagacttaggagacatgacattgttatgcatgaccttttgaact 27521469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 43383211 - 43383283
Alignment:
Q  126 tgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    ||||||| | |||||| |||||| |||||||| ||   ||||||||||||||||| ||||||||||| |||||    
T  43383211 tgtcaaacataaatggcataaaagcatgttgattgctggaacatgctttctcatggttggccactttatttga 43383283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 48539213 - 48539261
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcag 164  Q
    ||||| |||||||||||| |||||||||||||| |||||||| ||||||    
T  48539213 aaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcag 48539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 45614017 - 45613951
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| ||||||||||||||||||  ||||| |||| | |||||||||| ||||||| | ||||||||    
T  45614017 aatcctcgtaaacacaacattcatggacctaggagatttgacattgttatgcatgaacttttgaact 45613951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 44198798 - 44198963
Alignment:
Q  115 gaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct 214  Q
    |||||| |||||||||||| |||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||| |||| ||||||||||| |||    
T  44198798 gaaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattctcagaacacgctttctcatgtttggccactttgcttgacgcaacttttagagct 44198897  T
Q  215 gtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    | ||| ||||| |||||||  || || ||||||||||  ||||||||||  |  ||||||||||||    
T  44198898 gcctgacctacggtaaaaggtccgacacctaatcccacaagtggtgaaaccccagtcaagtctaca 44198963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 46940841 - 46940705
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||| ||||| |||||||||||||||| |||| ||| ||||||| | ||||||    
T  46940841 caaaagtgtcaaaaacaaatggtataaaagcatgttgattgtcggaacatgttttctaatgtttggccactttgcttgacgcatcttttagagttgtctg 46940742  T
Q  220 ccctaccgtaaaagccccaacccctaatcccatgagt 256  Q
     |||||| ||||| || | ||||||||||||| ||||    
T  46940741 tcctaccataaaatcctcgacccctaatcccacgagt 46940705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 319
Target Start/End: Original strand, 7900887 - 7901094
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || ||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||| ||| | |||| |||| |||  ||||||||    
T  7900887 aggaagccgaaagtgtcaaaaacaaatggtataaaagcatgttgattgtcagaaaacgctttctcatgttcggctattttgcttgacgcagtttttaggg 7900986  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
     | || | ||||||||||||| |||||||||||||||||  ||||||||||  |  |||||||| ||| |||  || ||||||| ||| ||| | |||||    
T  7900987 atatccgtcctaccgtaaaagacccaacccctaatcccacaagtggtgaaaccccagtcaagtccacacatgcatgttttcctcctacacatctatacac 7901086  T
Q  312 cataacat 319  Q
    ||||||||    
T  7901087 cataacat 7901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 339
Target Start/End: Original strand, 53785738 - 53785965
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| |||||||||| |||||||| ||||||||||| ||  |||| ||  |||| ||||    
T  53785738 aggaaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcgtgtttggccaccttacttgacgcggctttaaggg 53785837  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||| ||  ||||| ||||||| ||| || ||||||||||  ||||||||||  |  |||||||||||| |||  || ||||||| |||||||  ||||||    
T  53785838 ctgcctatcctacggtaaaaggcccgacacctaatcccactagtggtgaaaccccagtcaagtctacacatgcatgttttcctcctacccatccgtacac 53785937  T
Q  312 cataacatctgcatgactaagtgatgat 339  Q
    || |||||| ||||| || |||| ||||    
T  53785938 caaaacatccgcatgcctgagtgttgat 53785965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 251
Target Start/End: Complemental strand, 39583307 - 39583169
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||| |||||||||| ||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||| ||| |||||||||    
T  39583307 aggaaaccgaaagtgtcgaaaacaaatgatataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcagcttttaggg 39583208  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
    ||| ||  |||||| |||| | ||| |||| ||||||||    
T  39583207 ctgcctatcctaccataaatggcccgacccttaatccca 39583169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 326
Target Start/End: Original strand, 49017992 - 49018206
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||| ||| ||||||  ||||||||||||||| |||||||||| | | |||||| ||||    
T  49017992 aggaaaccgaaagtgtaaaaaaaaaatggtataaaaacatgttgattgttagaacacactttctcatgtttggtcactttgttttacgtaactttcaggg 49018091  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
     ||  || ||||||||||||| | | || |||||| |||  ||||||||||  |  ||||||| |||| |||  || ||||||| |||| ||  ||||||    
T  49018092 ttgcttgtcctaccgtaaaaggctcgacacctaattccacaagtggtgaaactccagtcaagtttacacatgcatgttttcctcgtaccaatccgtacac 49018191  T
Q  312 cataacatctgcatg 326  Q
    |||||||||||||||    
T  49018192 cataacatctgcatg 49018206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 37133075 - 37132971
Alignment:
Q  115 gaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggct 214  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||  |||||||| |||| | | |||||||||||    
T  37133075 gaaaccgaaagtgtaaaaaacaaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttaaccactttgcttgacgtagcttttagggct 37132976  T
Q  215 gtctg 219  Q
    |||||    
T  37132975 gtctg 37132971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 263
Target Start/End: Complemental strand, 52741590 - 52741439
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaac-ttttagg 211  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||| || |||||||||  || | |||||||    
T  52741590 aggaaaccaaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggtcaatttgtttgactcagctttttagg 52741491  T
Q  212 gctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||| ||| |||||  ||||||  || ||  |||||||||  ||||||||||    
T  52741490 gctgcctgtcctacaataaaaggtcctacatctaatcccacaagtggtgaaa 52741439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 26772787 - 26772911
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||| |||||||||| | ||||| |||||||||||||||| ||||  ||||||||||||    
T  26772787 aggaagccaaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgttttctgatgtttggccactttgcttgacacaacttttaggg 26772886  T
Q  213 ctgtctgccctaccgtaaaagcccc 237  Q
     ||  || ||||| ||||| |||||    
T  26772887 atgcatgtcctactgtaaatgcccc 26772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 4473090 - 4473224
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||  || |||||| ||||| |||||||| | ||||||| |||| |||| ||||| ||    
T  4473090 aggaagccgaaagtgtcaaaaacaaatagtataaaaacatattgatggttagaacacgctttttcatgttttgacactttgcttgacgcaatttttaagg 4473189  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaat 247  Q
    || |||| |||||||||||| |||||||| |||||    
T  4473190 ctctctgtcctaccgtaaaaaccccaaccactaat 4473224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 280
Target Start/End: Original strand, 13582539 - 13582705
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||  |||||| |||||||  ||||||| |||| ||| |||||||||    
T  13582539 aggaaatcaaaagtgt-aaaaacaaatggtataaaaacacgttgattgtcagaacacactttcttatgtttgatcactttgattgacgcagcttttaggg 13582637  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    |||  || ||||| ||||||| ||  || ||||||||||  |||| |||||    |||||||||||||    
T  13582638 ctgcttgtcctacggtaaaaggcctgacacctaatcccacaagtgttgaaacctcggtcaagtctaca 13582705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 37992384 - 37992511
Alignment:
Q  136 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagcc 235  Q
    ||||| ||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||||  ||||||  |||||| | || ||||||||||||  |    
T  37992384 aaatgatataaaatcatgttgattgtcagaacatgcttcctcatgtttggtcactttgtttgacacaacttgcagggctatatgtcctaccgtaaaaatc 37992483  T
Q  236 ccaacccctaatcccatgagtggtgaaa 263  Q
     | ||| |||||| |||||||| |||||    
T  37992484 tcgacctctaatctcatgagtgatgaaa 37992511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 5338672 - 5338796
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcag---aacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    ||||| || |||||||||||| ||||| |||||||| ||||||||||||||    |||   |||||||||||||||| | ||||||||| |||||| |||    
T  5338672 aggaagccgaaagtgtcaaaagcaaattgtataaaagcatgttgactgtcaacgcaacgcactttctcatgtttggcaattttgtttgacgcaactctta 5338771  T
Q  210 gggctgtctgccctaccgtaaaagc 234  Q
    ||||| |||| ||||||||||||||    
T  5338772 gggctttctgtcctaccgtaaaagc 5338796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 38670952 - 38670887
Alignment:
Q  119 ccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttg 184  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||||||||||    
T  38670952 ccaaaagtgtcaaaaacaaattgtataaaagcatgttgattgtcagaacacgctttctcatgtttg 38670887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 38146092 - 38146223
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    |||||||||||||   |||||||||||||||||||||| ||||| |||| | | ||||  ||||| |||||||| |||||||  ||||||||||||  ||    
T  38146092 caaaagtgtcaaatgtaaatggtataaaaacatgttgattgtcaaaacacgttgtctcgcgtttgaccactttgattgatgccgcttttagggctgcatg 38146191  T
Q  220 ccctaccgtaaaagccccaacccctaatccca 251  Q
     |||||| | ||||| || |||||||||||||    
T  38146192 tcctaccctcaaagctccgacccctaatccca 38146223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 32546824 - 32546901
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccact 190  Q
    |||||||  |||||||||||| ||||||||||||||  ||||||| |||| ||||| |||||||||||||||||||||    
T  32546824 aggaaactgaaagtgtcaaaagcaaatggtataaaagtatgttgattgtccgaacacgctttctcatgtttggccact 32546901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 3443390 - 3443270
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||| |  ||||||||||||| |||||||| ||| |||| |  |||| ||||||||||||| |||| |||| ||||||||||||     
T  3443390 aggaaactgaaagtgtcaacagaaaatggtataaaagcatgttgattgttagaatacactttttcatgtttggccattttgcttgacgcaacttttagga 3443291  T
Q  213 ctgtctgccctaccgtaaaag 233  Q
    || |||| |||| ||||||||    
T  3443290 ctctctgtcctatcgtaaaag 3443270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 38978877 - 38978757
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||||| || | | |||| ||||| |  ||| |||| ||||  ||||||||||||    
T  38978877 aggaaaccaaaagtgtcaaaaacaaatagtataaaaacatattgattgtcaaaatacgttttcacatgtctaaccaatttgcttgacacaacttttaggg 38978778  T
Q  213 ctgtctgccctaccgtaaaag 233  Q
     ||| |  |||||||||||||    
T  38978777 ttgtatttcctaccgtaaaag 38978757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 7502090 - 7502010
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaa-catgttgactgtcagaacatgctttctcatgtttggccacttt 192  Q
    |||||||||||| ||||||||  |||||||||||||| |||||||| |||  ||||| ||||||||||||||| |||||||    
T  7502090 aggaaaccaaaaatgtcaaaagaaaatggtataaaaaacatgttgattgttcgaacacgctttctcatgtttgaccacttt 7502010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 54508455 - 54508367
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatg-ctttctcatgtttggccactttgtttgatgcaacttt 207  Q
    ||||| |||||||| |||||| |||||||||||||| | |||||||||| |  |||||||||||| |||| ||||||||| ||||||||    
T  54508455 caaaaatgtcaaaagcaaatgatataaaaacatgttaattgtcagaacaagtttttctcatgtttagccattttgtttgacgcaacttt 54508367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 51234654 - 51234716
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttg 184  Q
    ||||||||||||| ||||||||||||| |||||||  ||||| |||||||||| |||||||||    
T  51234654 aaagtgtcaaaaataaatggtataaaagcatgttggttgtcataacatgctttttcatgtttg 51234716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 43123197 - 43123268
Alignment:
Q  136 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttt 207  Q
    |||| |||||| |||||||||| ||||||||||| |||| |||||||| | ||||||| ||||||| |||||    
T  43123197 aaatagtataacaacatgttgattgtcagaacatcctttatcatgtttagacactttgcttgatgcgacttt 43123268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 13582442 - 13582508
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||||||||||||||||||||||  | ||| ||||  ||||||||||| ||||||||| ||||||||    
T  13582442 aatcttcgtaaacacaacattcatggtcctaggagacatgacattgttatgcatgaccttttgaact 13582508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 38145988 - 38146054
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| ||||||||||||| ||||  ||||| ||||  ||||||||||| ||||||||||||||||||    
T  38145988 aatcatcgtaaacacaacgttcatggacctaggagacatgacattgttatgcatgaccctttgaact 38146054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 52411960 - 52411903
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcat 179  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||||| ||| ||||||    
T  52411960 aaagtgtcaaaagcaaatggaataaaagcatgttgattgtcagaacacgctctctcat 52411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 7502153 - 7502109
Alignment:
Q  71 gagttatgacattgttgtgcatgaccctttgaactttgtagaagg 115  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||    
T  7502153 gagtcatgacattgttgtgcatgaccctttaaactctgtagaagg 7502109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 46320093 - 46320025
Alignment:
Q  38 aaatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaactt 106  Q
    |||||||||||||||| |||||||  ||||| | ||| ||||||| ||||||  |||||||||||||||    
T  46320093 aaatcttcgtaaacacgacattcatggacctagaagtcatgacatcgttgtgtgtgaccctttgaactt 46320025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 46940944 - 46940882
Alignment:
Q  43 ttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||||||||||||||||||   ||||  |||| |||||||||| |||||||| ||||||||||    
T  46940944 ttcgtaaacacaacattcatgaacctatgagtcatgacattgtcgtgcatgatcctttgaact 46940882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 29862003 - 29862048
Alignment:
Q  289 tttcctcttacccatttgtacaccataacatctgcatgactaagtg 334  Q
    ||||||| |||||||  ||||||||||||||||||||| |||||||    
T  29862003 tttcctcctacccatccgtacaccataacatctgcatgcctaagtg 29862048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 35484763 - 35484691
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccacttt 192  Q
    |||| ||||||||  ||||| ||| ||||||||||||| |||  ||||||  ||||||||||||| |||||||    
T  35484763 caaacgtgtcaaatgcaaatagtacaaaaacatgttgattgttggaacatattttctcatgtttgaccacttt 35484691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 280
Target Start/End: Original strand, 6363 - 6529
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  6363 aggaaactgaaagtgtcaaaagcaaatggtatagaagcatgttgattgtcagaacacgctttctcatgtttggccactttacttgacgcaacttttaggg 6462  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
    ||||||| ||||| |||||||  || | |||||||||||  ||||||||||  |  ||||||||||||    
T  6463 ctgtctgtcctacggtaaaaggtccga-ccctaatcccacaagtggtgaaaccccagtcaagtctaca 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 33279 - 33428
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| ||| ||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||| || |||| ||    
T  33279 aggaaaccgaaaatgtcaaaagtaaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttagccactttgcttgatgccac-tttaagg 33377  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
     || ||| ||||||||||||| ||| || ||||||||||| ||||||||||    
T  33378 ttgcctgtcctaccgtaaaaggcccgacacctaatcccataagtggtgaaa 33428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 123 - 326
Target Start/End: Complemental strand, 23485006 - 23484802
Alignment:
Q  123 aagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccc 222  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||| | | |||||||||||   || ||    
T  23485006 aagtgtcaaaaacaaatggtataaaagcatgttgattgtcagaacatgctttctcatatttggccactttgtttgacgtagcttttagggctagttgtcc 23484907  T
Q  223 taccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccataacatct 321  Q
     ||||| |||| ||| || | ||||||||  ||||||||||  |   ||||||||||| |||  || ||||||| |||||||  ||||| |||||||| |    
T  23484906 caccgttaaaggcccgacacttaatcccacaagtggtgaaaccccaatcaagtctacacatgcatgttttcctcctacccatccgtacatcataacatat 23484807  T
Q  322 gcatg 326  Q
    |||||    
T  23484806 gcatg 23484802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 320
Target Start/End: Complemental strand, 41867986 - 41867778
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| |||| ||| |||||| ||    
T  41867986 aggaacccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacatgctttctcatgtttgaccactttgcttgacgcagcttttaagg 41867887  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||| ||| |||||  ||||||  || || ||||||||||  ||| |||||||    |||||||||||| | |  || ||||| | ||||||| |||||||    
T  41867886 ctgcctgtcctacgataaaaggtccgacacctaatcccacaagtcgtgaaatctcagtcaagtctacacaagcatgttttccacctacccatctgtacac 41867787  T
Q  312 cataacatc 320  Q
    |||||||||    
T  41867786 cataacatc 41867778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 324
Target Start/End: Original strand, 2888545 - 2888753
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||| | || |||||||||||||    
T  2888545 aggaagccaaaagtgtcataaacgaatggtataaaaacatgttgattgtcagaacacgttttctcatgtttgtccactttgctagacgcaacttttaggg 2888644  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtgttt-cctcttacccatttgtacac 311  Q
     ||| ||| ||||| |||     || ||||||||||| || ||||| ||||| |  || ||||| ||| |||  ||||| |||||||||||| |||| ||    
T  2888645 ttgtttgcactaccataa----tccgacccctaatcctataagtggcgaaattccagttaagtccacacatgcatgtttacctcttacccatatgtatac 2888740  T
Q  312 cataacatctgca 324  Q
    |||||||||||||    
T  2888741 cataacatctgca 2888753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 5532457 - 5532598
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    ||||||||||||  |||| |||||||| |||||||| ||||| |||| | ||||||||||||| |||||||| |||| ||| ||||||||||||  || |    
T  5532457 aaagtgtcaaaagtaaatagtataaaagcatgttgattgtcacaacacgttttctcatgtttgaccactttgcttgacgcagcttttagggctgcatgtc 5532556  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||||||||| |||| ||||||||||| |||||||||||||    
T  5532557 ctaccgtaaaatccccgacccctaatcctatgagtggtgaaa 5532598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 4413144 - 4413024
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||  || |||||||||    
T  4413144 aggaaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacacagcttttaggg 4413045  T
Q  213 ctgtctgccctaccgtaaaag 233  Q
     || ||| ||||| |||||||    
T  4413044 ttgcctgtcctacggtaaaag 4413024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 280
Target Start/End: Complemental strand, 9685486 - 9685326
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctg 219  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||||||||||| |||| ||   ||||||||||| ||     
T  9685486 caaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaacacgctttttcatgtttggccactttgcttgacgcggattttagggctgccta 9685387  T
Q  220 ccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctaca 280  Q
     ||||| |||||||  |  || ||||||||||  ||||||||||  |  ||||||||||||    
T  9685386 tcctacggtaaaaggtctgacacctaatcccacaagtggtgaaaccccagtcaagtctaca 9685326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 116 - 339
Target Start/End: Complemental strand, 19161858 - 19161634
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||  |||| |||  |||||||| ||    
T  19161858 aaaccgaaagtgtcaaaagcaaatggtataaaaacatgttgattgtcagaacacgctttttcatgtttgcccacttttcttgacgcagattttagggatg 19161759  T
Q  216 tctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccat 314  Q
    | || |||||| |||||| ||  ||  |||||| ||  ||||||||||  ||  ||||||||||| |||  || ||||||| |||||||   |||| |||    
T  19161758 tatgtcctaccataaaaggcctgacatctaatctcacaagtggtgaaaccctattcaagtctacacatgcatgttttcctcctacccatccttacatcat 19161659  T
Q  315 aacatctgcatgactaagtgatgat 339  Q
    |||||| ||||| || |||| ||||    
T  19161658 aacatccgcatgcctgagtgttgat 19161634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 28225029 - 28225167
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    ||||| || |||||||||||| |||||||||||||| |||||||| |||||||| | |||||||||| ||||| ||||||| |||| ||| ||||||  |    
T  28225029 aggaagccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcagaatacgctttctcatatttggtcactttgcttgacgcagcttttaaag 28225128  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
     ||| || |||||||||||||||| ||| ||||| ||||    
T  28225129 ttgtttgtcctaccgtaaaagccctaactcctaagccca 28225167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 44686490 - 44686598
Alignment:
Q  154 ttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcccatg 253  Q
    |||| |||||||||| |||||||||||||||||||| ||| ||||  || |||||||| ||||||| |||| |||||||||||| |||||||| ||||      
T  44686490 ttgattgtcagaacacgctttctcatgtttggccacattgcttgac-cagcttttaggactgtctgtcctatcgtaaaagccccgacccctaaacccaca 44686588  T
Q  254 agtggtgaaa 263  Q
    ||||||||||    
T  44686589 agtggtgaaa 44686598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 339
Target Start/End: Original strand, 17344667 - 17344894
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||  |||||||||||| |||||||||||||| |||||||| ||| | |||| | |||||| ||||||||||| ||  |||| ||| |||| |||     
T  17344667 aggaaactgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtgaaaacacgttttctcgtgtttggccaccttacttgacgcagctttaagga 17344766  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacac 311  Q
    ||| ||  ||||| |||||||  |  || ||||||||||  ||| ||||||  |  |||||||||||| |||  || ||||||| |||||||  ||||||    
T  17344767 ctggctttcctacggtaaaaggtctgacacctaatcccacaagttgtgaaaccccagtcaagtctacacatgcatgttttcctcctacccatccgtacac 17344866  T
Q  312 cataacatctgcatgactaagtgatgat 339  Q
    ||||||||| ||||| || |||| ||||    
T  17344867 cataacatccgcatgcctgagtgttgat 17344894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 1296111 - 1296031
Alignment:
Q  130 aaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttag 210  Q
    ||||| ||| |||||||||||||||| | |||||||||||  ||||||||||||||||| ||||||||| ||| |||||||    
T  1296111 aaaaaaaaaaggtataaaaacatgtttattgtcagaacatattttctcatgtttggccattttgtttgacgcagcttttag 1296031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 13147175 - 13147096
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaa---acatgttgactgtcagaacatgctttctcatgtttggccacttt 192  Q
    |||||||||||||||||| ||||||||||||||   | ||| ||| |||||||||| ||||||||||||||| |||||||    
T  13147175 aaaccaaaagtgtcaaaatcaaatggtataaaaagtatatgctgattgtcagaacacgctttctcatgtttgaccacttt 13147096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 27502400 - 27502540
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgcc 221  Q
    |||||||||||||  ||| |||||||| |||||||  |||| ||||| | ||||||||||||| |||||||| |||| ||| ||||||||| | | || |    
T  27502400 aaagtgtcaaaaagcaattgtataaaagcatgttgtttgtcggaacacgttttctcatgtttgaccactttgcttgacgcagcttttagggttat-tgtc 27502498  T
Q  222 ctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||| ||||||||| |  |||||||| ||||  ||||||||||    
T  27502499 ctatcgtaaaagctctgacccctaaacccacaagtggtgaaa 27502540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 34814893 - 34814812
Alignment:
Q  117 aaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    |||| |||||||| ||| |||||||||||||| ||| |||| |||||||||| |||||||||||||||  |||||| |||||    
T  34814893 aaccgaaagtgtcgaaagcaaatggtataaaagcatattgattgtcagaacacgctttctcatgtttgatcactttatttga 34814812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 18745019 - 18744956
Alignment:
Q  126 tgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccac 189  Q
    |||||||| ||||||||||||||  ||||||| |||||||||| |||||||| |||||||||||    
T  18745019 tgtcaaaagcaaatggtataaaagtatgttgattgtcagaacacgctttctcgtgtttggccac 18744956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 3825764 - 3825894
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcag-aacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgc 220  Q
    ||||||||  || ||||||  |||||||||||| || |||||| || |  |||| ||||||||| |||||||| |||| ||| ||||||||||| ||||     
T  3825764 aaagtgtctgaagcaaatgaaataaaaacatgtagattgtcaggaaaaaactttttcatgtttgaccactttgcttgacgcagcttttagggctctctgt 3825863  T
Q  221 cctaccgtaaaagccccaacccctaatccca 251  Q
    | ||||||||||| ||  |||||||||||||    
T  3825864 cataccgtaaaagtcctgacccctaatccca 3825894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 33612625 - 33612555
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgttt 183  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||| ||||| |||| | ||||||||||||    
T  33612625 aggaagccaaaagtgtcaaatacaaattgtataaaatcatgttgattgtcaaaacacgttttctcatgttt 33612555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 2886692 - 2886638
Alignment:
Q  114 ggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaaca 168  Q
    ||||||| ||| | ||||||||||||| |||||||||||||||| ||||||||||    
T  2886692 ggaaaccgaaaatatcaaaaacaaatgatataaaaacatgttgattgtcagaaca 2886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 5679314 - 5679392
Alignment:
Q  120 caaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    ||||||||||||| | ||||||||| |||  ||||||| | ||  |||||| |||||||||||||||||||||| ||||    
T  5679314 caaaagtgtcaaacataaatggtatgaaaggatgttgattatcttaacatgttttctcatgtttggccactttgcttga 5679392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 17344570 - 17344636
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||||| ||||||||| ||||||||    
T  17344570 aatcctcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaact 17344636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 41868083 - 41868017
Alignment:
Q  39 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||||| ||||||||| ||||||||    
T  41868083 aatcctcgtaaacacaacattcatggacctgggagacatgacattgttatgcatgaccttttgaact 41868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 20142800 - 20142753
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtca 163  Q
    ||||||||||||||||||  ||||||||||||| |||||||| |||||    
T  20142800 aaaccaaaagtgtcaaaagaaaatggtataaaagcatgttgattgtca 20142753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 13413291 - 13413349
Alignment:
Q  47 taaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 105  Q
    |||||||||||||||  ||||| ||||  ||||||||||| ||||||||| ||||||||    
T  13413291 taaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaact 13413349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 9674946 - 9675023
Alignment:
Q  186 ccactttgtttgatgcaacttttagggctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    ||||||||||||| |||  |||||||||| | || |||||| ||||||  |  | |||||||||||||||||||||||    
T  9674946 ccactttgtttgacgcatattttagggctatttgtcctaccataaaaggtctgatccctaatcccatgagtggtgaaa 9675023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 44720374 - 44720427
Alignment:
Q  135 caaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggcca 188  Q
    |||| |||||||||||||||||| ||||| |||| | ||| |||||||||||||    
T  44720374 caaacggtataaaaacatgttgattgtcataacacgttttttcatgtttggcca 44720427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 18441 - 18292
Alignment:
Q  114 ggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggc 213  Q
    ||||| |||||||||||||| || |||  ||||||||||||||| ||| |||||| | |||||||||||||||| ||||||||||||||||||||||||     
T  18441 ggaaatcaaaagtgtcaaaagcagatgacataaaaacatgttgattgtgagaacacg-tttctcatgtttggccgctttgtttgatgcaacttttagggt 18343  T
Q  214 tgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaat 264  Q
    ||| || |||| | ||||||| || |||| |||||||| |||| |||||||    
T  18342 tgtttgtcctatcataaaagctccgacccgtaatcccacgagtagtgaaat 18292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 263
Target Start/End: Original strand, 10389 - 10543
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactg----tcagaacatgctttctcatgtttggccactttgtttgatgcaactttt 208  Q
    ||||| ||| ||||||||||| |||||||||||||| |||||||| ||    |||||||| || || ||||||||||||| |||  |||| |||||||||    
T  10389 aggaagccacaagtgtcaaaagcaaatggtataaaagcatgttgattgattgtcagaacacgcattatcatgtttggccattttacttgacgcaactttt 10488  T
Q  209 agggctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaa 263  Q
    |||||||  || || || ||||||||||||||||||||||||| |||||||||||    
T  10489 agggctgcttgtccaactgtaaaagccccaacccctaatcccacgagtggtgaaa 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 320
Target Start/End: Complemental strand, 259 - 54
Alignment:
Q  116 aaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    ||||||||||||||||| ||||||||||||||| ||||||||  |||| |||   || |||||||||||||||||||| |||| |||  |||||||||||    
T  259 aaaccaaaagtgtcaaacacaaatggtataaaagcatgttgatggtcataacccactgtctcatgtttggccactttgcttgacgcagtttttagggctg 160  T
Q  216 tctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatgagtg-tttcctcttacccatttgtacaccat 314  Q
     ||| ||||| ||||||| ||| || | ||||||||  ||||||||||  |  |||||||||| | |||  || ||||||| |||||||  ||||| |||    
T  159 cctgtcctacagtaaaaggcccgacacttaatcccacaagtggtgaaaccccagtcaagtctatacatgcatgttttcctcctacccatccgtacatcat 60  T
Q  315 aacatc 320  Q
    ||||||    
T  59 aacatc 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 47617 - 47390
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||| | ||||||| |||| ||||||||||||||| ||||| ||||||||||||   ||||||||||||||||| |||  |||| ||||||||||||     
T  47617 aggaaatcgaaagtgttaaaagcaaatggtataaaaatatgttaactgtcagaacacattttctcatgtttggccattttacttgacgcaacttttaggt 47518  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatcccatgagtggtgaaatactggtcaagtctacaaatg-agtgtttcctcttacccatttgtacac 311  Q
     | | || ||||||||||||| | ||| |||||||||||  ||||||||||  |   ||||||| |||  || | | ||| ||| ||| |||||||||||    
T  47517 ttatttgtcctaccgtaaaagtctcaatccctaatcccacaagtggtgaaaccccaatcaagtccacacttgcatttttttctcatactcatttgtacac 47418  T
Q  312 cataacatctgcatgactaagtgatgat 339  Q
    |||||||| |||||  ||||||| ||||    
T  47417 cataacatttgcatccctaagtgttgat 47390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 49449 - 49542
Alignment:
Q  122 aaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctg 215  Q
    |||||||||||| |||||||||||||| || ||||| |||||||||| | |||||||  |||| ||||||||||||||||||||||||||||||    
T  49449 aaagtgtcaaaagcaaatggtataaaagcacgttgattgtcagaacacgatttctcacatttgaccactttgtttgatgcaacttttagggctg 49542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 103135 - 103272
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttaggg 212  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| |||||| ||| |||||||| ||||||||||  ||  |||| ||| |||| ||||    
T  103135 aggaaaccgaaagtgtcaaaagcaaatggtataaaagcatgttgattgtcag-acacgctttctcgtgtttggccatcttacttgacgcagctttgaggg 103233  T
Q  213 ctgtctgccctaccgtaaaagccccaacccctaatccca 251  Q
    ||| ||| ||||| ||||||| ||| || ||| ||||||    
T  103234 ctgcctgtcctacggtaaaaggcccgacaccttatccca 103272  T

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Target: scaffold0493 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 8594 - 8525
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtt 182  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8594 aggaaaccaaaagtgttaaacgcaaatggtataaaaacatgttgattgtcagaacatgttttctcatgtt 8525  T

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Target: scaffold0119 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 16191 - 16275
Alignment:
Q  141 gtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaacttttagggctgtctgccctac 225  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||| ||||||||| ||| ||||||| | |||||| |||||    
T  16191 gtataaaaacatgtttattgtcagaacatgttttctcatgtttggccattttgtttgacgcagcttttagcgttgtctgtcctac 16275  T

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Target: scaffold0470 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 7631 - 7727
Alignment:
Q  113 aggaaaccaaaagtgtcaaaaacaaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttgatgcaactttta 209  Q
    |||||||  |||||||||||| |||||||| ||||| |||||||| ||| |||||| ||||||||||||||  | ||| | ||||| ||||||||||    
T  7631 aggaaactgaaagtgtcaaaagcaaatggtttaaaatcatgttgattgtgagaacacgctttctcatgtttaactactctatttgacgcaactttta 7727  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 37391 - 37444
Alignment:
Q  145 aaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 198  Q
    ||||||||||||| |||||||| |||||||||||||||||  || |||||||||    
T  37391 aaaaacatgttgattgtcagaatatgctttctcatgtttgatcattttgtttga 37444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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