View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1503_low_26 (Length: 282)
Name: NF1503_low_26
Description: NF1503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1503_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 22441598 - 22441846
Alignment:
| Q |
15 |
aaatagaacctcatgaattccattaacaatggcaaggacaaagtgagtccttcctccccattgcatcaaaggaagcaacgctccgcttggcaccagtcct |
114 |
Q |
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| T |
22441598 |
aaatagaacctcatgaattccattaacaatggcaaggacaaagtgagtccttcctccccattgcatcaaaggaagcaacgctccgcttggcactagtcct |
22441697 |
T |
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| Q |
115 |
gaaattcatttcatgagtagtgacaaaaatttcaacaacaataaataaatcatataacagttagaaggtaattgaatgaatgacagtgtaaaacctacca |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
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| T |
22441698 |
gaaattcatttcatgagtagtgacaaaaatttcaacaacaataaataaatcatataacagttagaaggtaattcaatgaatgatagtgtaaaacctacca |
22441797 |
T |
|
| Q |
215 |
atggcaccgtgtataacttccaagaatgcagcacattgcagaaaacctt |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22441798 |
atggcaccgtgtataacttccaagaatgcagcacattgcagaaaacctt |
22441846 |
T |
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