View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1565_high_1 (Length: 764)
Name: NF1565_high_1
Description: NF1565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1565_high_1 |
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[»] scaffold0004 (1 HSPs) |
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[»] scaffold0166 (1 HSPs) |
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[»] scaffold0096 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 162 - 462
Target Start/End: Complemental strand, 9411493 - 9411194
Alignment:
Q |
162 |
atatatataatgcattaatattttgcatagttgtcaaaatagacttagtcattagagttggatttggatcctctccaaccatttctctcatgttgtttgt |
261 |
Q |
|
|
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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|
T |
9411493 |
atatatatagtgcattaatattttgcatagctgtcaaaatagacttagtcattagagttggacttggatcctctccaaccatttctctcatgttgtttgt |
9411394 |
T |
|
Q |
262 |
cctaccataatctaagccatttattcacctattttctctctctttagtgctgttttttgttcatttatgaaccaatcaaccattggatcagaaaaggaga |
361 |
Q |
|
|
||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
9411393 |
cctgccataatctaagccatttattcacctattttctctct--ttagtgttgttttttgtttatttatgaaccaatcaaccattggatcagaaaaggaga |
9411296 |
T |
|
Q |
362 |
gggggctgcacaaaaaatgcaggagatgatccaaatccattagagttaaggatggcaaagcgggtcggcccaacctgttt-aactcgtctctcataagcc |
460 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| || |
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|
T |
9411295 |
gggggctgcacaaaaaatgcaggagaggatccaaatccattagagttaaggatggcaaagcgggtcggcccaacctgtttaaactcgtctctcttaaacc |
9411196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 30624865 - 30625123
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| |||| | |||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||| ||||| | |
|
|
T |
30624865 |
cttctatgaagaagtcgagaaattgacttttttagtgaagtcgtttaattcaaccaatcagatttcaagtcatgacacgtcagatgttgggataaatttt |
30624964 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
30624965 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaaaattttaacggttagatttgtttggtctctatgttattgtggtacaccct |
30625064 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
30625065 |
ctacacatgatttttcttatttttccaattctctttcctctttatcactcattcatctc |
30625123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 494 - 752
Target Start/End: Complemental strand, 41413659 - 41413401
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
||||||||| || |||||| || ||| || |||| ||||||||||| | | ||||||||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
T |
41413659 |
cttctatgatgaagtcgggtaaatgacttcttcggtgaagtcgtttgaatggaccaatcagatttcaagccatgacacgtcagatgttaggacaaattat |
41413560 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |
|
|
T |
41413559 |
aatatggatcacttgcttcatatgttccaccgtggacaagtttatttcaagatcttaacggttaggtttacttggtgtctatgttattgtggtacaccct |
41413460 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||| |||||| |||||||||||||| |||||||| |||||| |
|
|
T |
41413459 |
ttacacatgatttttcttataattccaaatctctttcctctttatcactcatgcatctc |
41413401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 221 - 398
Target Start/End: Complemental strand, 14270893 - 14270716
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgttttttg |
320 |
Q |
|
|
||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
14270893 |
ggatttggatcctctccaaccatttctttcatgttgtttgtcctgccataatctaagctatttattcacctattttctctctctttaatgctgttttttg |
14270794 |
T |
|
Q |
321 |
ttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatc |
398 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
14270793 |
ttcatttatgaaccaatcaaccattggatccgtaaaggagagggggctgcacaaaaaaggcaggagatgatccaaatc |
14270716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 1828413 - 1828671
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
||||||||| || |||||| || ||| || |||| ||||||||||| | | ||||||||||||||||||||||||| ||| ||||| |||||||||| |
|
|
T |
1828413 |
cttctatgatgaagtcgggtaaatgacttcttcggtgaagtcgtttgaatggaccaatcagatttcaagccatgacacgtcagatgttatgacaaattat |
1828512 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |
|
|
T |
1828513 |
aatatggatcacttgcttcatatgttccaccgtggacaagtttatttcaagatcttaacggttaggtttacttggtgtctatgttattgtggtacaccct |
1828612 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||| |||||| ||||| |||||||| |||||||| |||||| |
|
|
T |
1828613 |
ttacacatgatttttcttataattccaaatctctctcctctttatcactcatgcatctc |
1828671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 40313878 - 40314136
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
||||||||| || |||||| || ||| || |||| ||||||||||| | | ||||||||||||||||||||||||| ||| ||||| |||||||||| |
|
|
T |
40313878 |
cttctatgatgaagtcgggtaaatgacttcttcggtgaagtcgtttgaatggaccaatcagatttcaagccatgacacgtcagatgttaggacaaattac |
40313977 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |
|
|
T |
40313978 |
aatatggatcacttgcttcatatgttccaccgtggacaagtttatttcaagatcttaacggttaggtttacttggtgtctatgttattgtggtacaccct |
40314077 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||| |||||| ||||| |||||||| |||||||| |||||| |
|
|
T |
40314078 |
ttacacatgatttttcttataattccaaatctctctcctctttatcactcatgcatctc |
40314136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 9424303 - 9424145
Alignment:
Q |
1 |
tggaaactttgtcaccatacacagtggctgctcgttcaaagaaacagatcggtgtcaaaggtatgtgtgaacctttagagcactcaaccagatcttgtgt |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
T |
9424303 |
tggaaactttgtcaccatacacagtggctgctcgttcaaggaaacagatcggtgtcaaaggtatgtgtgaacctttagagcactcaaccaggtcttgcgt |
9424204 |
T |
|
Q |
101 |
cattgtaacatcctcactggttctggttctgtacggcaggtatttgcttaatacatgca |
159 |
Q |
|
|
||||||||| |||||| |||||||||||||||||||| ||||||||||||||| ||||| |
|
|
T |
9424203 |
cattgtaacgtcctcattggttctggttctgtacggctggtatttgcttaatatatgca |
9424145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 531 - 708
Target Start/End: Complemental strand, 31482248 - 31482071
Alignment:
Q |
531 |
aagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttcatatgttccaccatagac |
630 |
Q |
|
|
||||||||| | | ||||||||| |||| ||| ||||||| ||| | || |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
31482248 |
aagtcgtttgaatgagccaatcaaattttaagtgatgacacttcagaagtaaggacaaattataatatggatcacttgctccatatgttccaccatagac |
31482149 |
T |
|
Q |
631 |
aagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgattttt |
708 |
Q |
|
|
| |||| |||| |||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||| |
|
|
T |
31482148 |
agatttacttcatgatcttaatggttagatttgtttggtctctatggtattatggtacaccatctacacataattttt |
31482071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 736
Target Start/End: Complemental strand, 24788400 - 24788298
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||| | ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
24788400 |
tttattttatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
24788301 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
24788300 |
ttt |
24788298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 1278296 - 1278223
Alignment:
Q |
314 |
ttttttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggaga |
387 |
Q |
|
|
|||||| |||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||| ||| |||| |
|
|
T |
1278296 |
tttttttttcatttatgaaccaatcaatcattggactagagaaggagagggagctgcacaaaaaaggcacgaga |
1278223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 701
Target Start/End: Original strand, 39884696 - 39884763
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacat |
701 |
Q |
|
|
||||||||| |||||||| |||||||||| || |||||||||||||||||||| || ||||||||| |
|
|
T |
39884696 |
tttatttcatgatcttaatggttagatttacttagtctctatgttattgtggtatactgtctacacat |
39884763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 27292947 - 27293205
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
T |
27292947 |
cttctatgaagaagtcggggaattgactttttcggtgaagtcgtttaattcagccaatcagatttcaagccatgacacgtcatatgttgggacaaattct |
27293046 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
27293047 |
aatatggatcacttgtttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
27293146 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
27293147 |
ctacacatgatttttcttatttttccaattctctttcctctttatcactcattcatctc |
27293205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 4919016 - 4919273
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| | |
|
|
T |
4919016 |
cttctatgaagaagtcggggaattgactttttcggtgaagtcgtt-aattcagccaatcagatttcaagccatgacacgtcagatgttgggacaaattct |
4919114 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || |
|
|
T |
4919115 |
aatatggatcacttgtttcatatgttccaccatagacaagtttatttcaagatcttaatggttagatttgtttggtctctatgatattgtggtacacgct |
4919214 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
T |
4919215 |
ctacacatgatttttcttatttttccaattctatttcctctttatcactcattcatctc |
4919273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 494 - 736
Target Start/End: Original strand, 42976332 - 42976573
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| ||||| |||||| || ||||||| |||||||||||||| |||||||||||||||| ||||||| ||| |||| | | ||||| | |
|
|
T |
42976332 |
cttctatgaagaagtcggacaattgacttcttcgatgcagtcgtttaattcaaccaatcagatttcaagagatgacacgtcacatgtaga-ataaatttt |
42976430 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||||| |||| || ||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||| ||||||||||| | |
|
|
T |
42976431 |
aatatggatcacttgctccataagtcccaccatagacaagtttcttttatgatcttaacggttagatttacttggtctctatgttaatgtggtacaccat |
42976530 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctcttt |
736 |
Q |
|
|
|||||||||||||||||| | | ||||||||| |||||||| |
|
|
T |
42976531 |
ctacacatgatttttcttctagtatcaattctctctcctcttt |
42976573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 400
Target Start/End: Original strand, 54676943 - 54677121
Alignment:
Q |
220 |
tggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctcttta----gtgctgtt |
315 |
Q |
|
|
||||||| |||||||||||||||||||||| |||| |||||| || ||||||||||| ||| |||||| ||||||||||| ||| ||| |||| |
|
|
T |
54676943 |
tggatttagatcctctccaaccatttctcttatgtagtttgttctgtcataatctaag--attcattcac--attttctctctttttccctggtgttgtt |
54677038 |
T |
|
Q |
316 |
ttttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcca |
400 |
Q |
|
|
|||||||||||||||| ||||||||||||| |||||||||| ||| ||| ||||||||||| | |||||| ||||||| |||| |
|
|
T |
54677039 |
ttttgttcatttatgagtcaatcaaccattgaatcagaaaagtaga--gggttgcacaaaaaaggtaggagaggatccaattcca |
54677121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 644 - 711
Target Start/End: Complemental strand, 45989676 - 45989609
Alignment:
Q |
644 |
gatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
45989676 |
gatcttaacggttagatttaattggtctctatgttattgtggtataccatctacacatgatttttctt |
45989609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 634 - 711
Target Start/End: Original strand, 20133410 - 20133487
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
20133410 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttctt |
20133487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 644 - 736
Target Start/End: Complemental strand, 42069112 - 42069020
Alignment:
Q |
644 |
gatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctcttt |
736 |
Q |
|
|
||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| | || ||||||| | |||||||| |
|
|
T |
42069112 |
gatcttaacggttagatttaattgatctctatgttattgtggtataccatctacacatgatttttcttctaatttcaattctttctcctcttt |
42069020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 736
Target Start/End: Complemental strand, 55919463 - 55919361
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
55919463 |
tttatttcatgattttaatagttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
55919364 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
55919363 |
ttt |
55919361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 644 - 711
Target Start/End: Complemental strand, 47031525 - 47031458
Alignment:
Q |
644 |
gatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
|||||||| |||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
47031525 |
gatcttaatggttagatttaattgatctctatgttattgtggtataccatctacacatgatttttctt |
47031458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 34114776 - 34114921
Alignment:
Q |
222 |
gatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctct----ctttagtgctgtttt |
317 |
Q |
|
|
||||||||||||||||||| |||| ||| || |||||||| || | ||||||| |||| |||| ||| |||||||||| ||||||| | |||| |
|
|
T |
34114776 |
gatttggatcctctccaactatttttctgatattgtttgttctgttgttatctaagtcattcattccccttttttctctctatctctttagtaccgtttc |
34114875 |
T |
|
Q |
318 |
ttgttcatttatgaaccaatcaa-ccattggatcagaaaaggagag |
362 |
Q |
|
|
|||||||| |||||||||||||| |||||| |||||||||| |||| |
|
|
T |
34114876 |
ttgttcatctatgaaccaatcaacccattgaatcagaaaagaagag |
34114921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 15531287 - 15531216
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatt |
705 |
Q |
|
|
||||||||| |||||||| |||||||||| || |||||||||||||||||||| || ||||||||||||| |
|
|
T |
15531287 |
tttatttcatgatcttaatggttagatttacttagtctctatgttattgtggtatactgtctacacatgatt |
15531216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 28679508 - 28679610
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||| | |||||||| |||| |||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
28679508 |
tttattttatgatcttaatagttaaatttacttgatctctatgttattgtggtataccatctacacatgatttttcttctagtaccaattttctctcctc |
28679607 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
28679608 |
ttt |
28679610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 397
Target Start/End: Original strand, 48351638 - 48351822
Alignment:
Q |
217 |
agttggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctat-tttctctctctttagtgc---t |
312 |
Q |
|
|
||||||||||| ||||| || |||||||||||||| |||||| || | ||||||||||||||||| ||| ||| | | ||||||||| | || | |
|
|
T |
48351638 |
agttggatttgaatcctttcgaaccatttctctcacgttgttggttatgccataatctaagccattcatttaccactctctctctctctctctcgccttt |
48351737 |
T |
|
Q |
313 |
gttttttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaat |
397 |
Q |
|
|
||||||||| |||| || ||||||||||||| ||| | ||||| ||||||| |||||||||||| | |||||| |||| |||| |
|
|
T |
48351738 |
tttttttgtttattttcgagccaatcaaccattagattataaaagaagaggggactgcacaaaaaaggtaggagacgatctaaat |
48351822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 329
Target Start/End: Original strand, 9595018 - 9595127
Alignment:
Q |
220 |
tggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgtttttt |
319 |
Q |
|
|
|||| ||||||||| |||||||||||||||| || | ||||| || || |||||||||||||||| ||| |||||| ||| || || |||||||| |
|
|
T |
9595018 |
tggagttggatcctgtccaaccatttctctcttgctatttgttctgtcacgatctaagccatttatttaccctttttctttcttattggtattgtttttt |
9595117 |
T |
|
Q |
320 |
gttcatttat |
329 |
Q |
|
|
|||||||||| |
|
|
T |
9595118 |
gttcatttat |
9595127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 581
Target Start/End: Complemental strand, 24228360 - 24228273
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgtt |
581 |
Q |
|
|
||||||||| || |||||| || ||| || |||| ||||||||||| | | ||||||||||||||||||||||||| ||| ||||| |
|
|
T |
24228360 |
cttctatgatgaagtcgggtaaatgacttcttcggtgaagtcgtttgaatggaccaatcagatttcaagccatgacacgtcagatgtt |
24228273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 17643733 - 17643763
Alignment:
Q |
222 |
gatttggatcctctccaaccatttctctcat |
252 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
17643733 |
gatttggatcctctccaaccatttctctcat |
17643763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 494 - 752
Target Start/End: Complemental strand, 50650608 - 50650350
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | |
|
|
T |
50650608 |
cttctatgaagaagtcggggaattgactttttcggtaaagtcgtttaattcagccaatcagatttcaagccatgacacgtcagatgttgggacaaattct |
50650509 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
50650508 |
aatatggatcacttgtttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
50650409 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
50650408 |
ctacacatgatttttcttatttttccaattctctttcctctttatcactcattcatctc |
50650350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 12938402 - 12938660
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
||||||||| || |||||| || ||| || |||| ||||||||||| | | ||||||||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
T |
12938402 |
cttctatgatgaagtcgggtaaatgacttcttcggtgaagtcgtttgaatggaccaatcagatttcaagccatgacacgtcagatgttaggacaaattat |
12938501 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |
|
|
T |
12938502 |
aatatggatcacttgcttcatatgttccaccgtggacaagtttatttcaagatcttaacggttaggtttacttggtgtctatgttattgtggtacaccct |
12938601 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||| |||||| ||||| |||||||| |||||||| |||||| |
|
|
T |
12938602 |
ttacacatgatttttcttataattccaaatctctctcctctttatcactcatgcatctc |
12938660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 514 - 736
Target Start/End: Complemental strand, 31659015 - 31658794
Alignment:
Q |
514 |
aattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttca |
613 |
Q |
|
|
|||||| || |||| || |||||||||||||| |||||||||||||||| ||||||||||| |||| || | ||||| |||||||||||||||||| || |
|
|
T |
31659015 |
aattgacttcttcggtgcagtcgtttaattcaaccaatcagatttcaagagatgacacatcacatgtagg-ataaattctaatatggatcacttgctcca |
31658917 |
T |
|
Q |
614 |
tatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttat |
713 |
Q |
|
|
|| || ||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
T |
31658916 |
taagtcccaccatagacaagtttcttttatgatcttaacggttagatttacttggtctctatgttattgtggtacaccatctacacatgatttttcttct |
31658817 |
T |
|
Q |
714 |
ttttccaattctctttcctcttt |
736 |
Q |
|
|
| ||||||||| |||||||| |
|
|
T |
31658816 |
aatatcaattctctctcctcttt |
31658794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 524 - 708
Target Start/End: Complemental strand, 33216841 - 33216657
Alignment:
Q |
524 |
ttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttcatatgttccac |
623 |
Q |
|
|
|||| ||||||||||| | | |||||||||||||| ||| ||||||| || || || ||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
33216841 |
ttcggtgaagtcgtttgaatgagccaatcagattttaagtgatgacacgtcctaagtaatgacaaattataatatggatcacttgctccatatgttccac |
33216742 |
T |
|
Q |
624 |
catagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgattttt |
708 |
Q |
|
|
|||||||| |||| |||| |||||||| |||||||||||||||| ||||||| |||| ||||||| | ||||| ||| |||||| |
|
|
T |
33216741 |
catagacagatttacttcatgatcttaatggttagatttgtttggcctctatggtattatggtacagcatctacgcataattttt |
33216657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 529 - 701
Target Start/End: Original strand, 29833311 - 29833483
Alignment:
Q |
529 |
tgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttcatatgttccaccatag |
628 |
Q |
|
|
||||||||||| | | | |||||||||||| ||| ||||||| ||| | || |||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
29833311 |
tgaagtcgtttgaatgaaccaatcagattttaagtgatgacacgtcagaagtaaggacaaattataatatggatcacttgctccatatgttccaccatag |
29833410 |
T |
|
Q |
629 |
acaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacat |
701 |
Q |
|
|
||| |||| || | |||||||| ||||||||||||||||| |||||| |||| ||||||||| ||| ||||| |
|
|
T |
29833411 |
acagatttacttgatgatcttaatggttagatttgtttggtttctatggtattatggtacaccatcttcacat |
29833483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 34387573 - 34387435
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctg-tttttt |
319 |
Q |
|
|
|||||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||| |||||| ||||||||||||| ||| || |||||| |
|
|
T |
34387573 |
ggatttggattctctccaaccatttctcttatgttgtttgttttgtcataatctaagccattaattcac---ttttctctctcttaggtgttgttttttt |
34387477 |
T |
|
Q |
320 |
gttcatttatgaaccaatcaaccattggatcagaaaaggaga |
361 |
Q |
|
|
||||| ||||| |||||||||||||||||||| ||||||| |
|
|
T |
34387476 |
gttcaactatgagtcaatcaaccattggatcagagaaggaga |
34387435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 634 - 711
Target Start/End: Complemental strand, 39833307 - 39833230
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
39833307 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttctt |
39833230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 1292301 - 1292228
Alignment:
Q |
279 |
catttattcacctattttctctctctttagtgctgttttttgttcatttatgaaccaatcaaccattggatcaga |
353 |
Q |
|
|
||||||||||| | |||||||| ||||| ||| || ||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
1292301 |
catttattcactt-ttttctctgtctttggtgttgatttttgttcatttatgagccaatcaaccattggatcaga |
1292228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 378
Target Start/End: Complemental strand, 1294865 - 1294763
Alignment:
Q |
274 |
taagccatttattcacctattttctctctctttagtgctgttttttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcaca |
373 |
Q |
|
|
|||| ||||||||||| | |||||||| ||||| ||| ||| | ||||||||| |||| |||||||||||||||||||||||||| |||||| |||| | |
|
|
T |
1294865 |
taagtcatttattcactt-ttttctctttctttggtgttgtgtattgttcatt-atgagtcaatcaaccattggatcagaaaaggaaagggggttgcata |
1294768 |
T |
|
Q |
374 |
aaaaa |
378 |
Q |
|
|
||||| |
|
|
T |
1294767 |
aaaaa |
1294763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 29703612 - 29703541
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatt |
705 |
Q |
|
|
||||||||| |||||||| |||||||||| || |||||||||||||||||||| || ||||||||||||| |
|
|
T |
29703612 |
tttatttcatgatcttaatggttagatttacttagtctctatgttattgtggtatactgtctacacatgatt |
29703541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 36950234 - 36950163
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatt |
705 |
Q |
|
|
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||| |
|
|
T |
36950234 |
tttatttcatgatcttaatggttagatttacttggtctctatgttattgtggtatattgtctacacatgatt |
36950163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 732
Target Start/End: Original strand, 5232946 - 5233044
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcct |
732 |
Q |
|
|
||||||||| |||||||| ||||||||| ||| ||| ||||||||||||||||| | ||||||||||| ||||||| | | |||||||||| |||| |
|
|
T |
5232946 |
tttatttcatgatcttaatagttagatttacttgatctttatgttattgtggtacaacatctacacatgaattttcttctagtaccaattctctctcct |
5233044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 732
Target Start/End: Original strand, 20104322 - 20104420
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcct |
732 |
Q |
|
|
||||||||| |||||||| |||||||||| ||| ||| ||||||||||||||||| | ||||||||| | ||||||| | | |||||||||| |||| |
|
|
T |
20104322 |
tttatttcatgatcttaatggttagatttacttgatctttatgttattgtggtacaacatctacacattaattttcttctagtaccaattctctctcct |
20104420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 705
Target Start/End: Original strand, 53282294 - 53282365
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatt |
705 |
Q |
|
|
||||||||| ||||||| |||||||||| || |||||||||||||||||||| || ||||||||||||| |
|
|
T |
53282294 |
tttatttcattatcttaatggttagatttacttagtctctatgttattgtggtatactgtctacacatgatt |
53282365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 494 - 751
Target Start/End: Original strand, 27286165 - 27286422
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| || || | |
|
|
T |
27286165 |
cttctatgaagaagtcgaggaattgactttttcggtgaagtcgtttaattcagccaatcagatttcaagccatgacacgtcagatgttgggaaaattttt |
27286264 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
27286265 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaaaatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
27286364 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatct |
751 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
27286365 |
ctacacatgatttttcttatttttccaattctctttcctctttatcactcattcatct |
27286422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 494 - 752
Target Start/End: Complemental strand, 52386030 - 52385772
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| || ||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
T |
52386030 |
cttctatgaagaagttgggaaattgactttttcggtgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattct |
52385931 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
|| ||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
52385930 |
aaaatggatcacgtgtttcatatgttccaccatagacaagtttatttcaagatctttacggttagatttgtttgatctctatgttattgtggtacaccct |
52385831 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| |
|
|
T |
52385830 |
ctacacatgatttttcttacttttccaattctctttcctctttatcacccattcatctc |
52385772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 223 - 399
Target Start/End: Complemental strand, 27528347 - 27528170
Alignment:
Q |
223 |
atttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgtt-ttttgt |
321 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
T |
27528347 |
atttcgatcctctccaaccatttctctcatgttgtttgtcctgccataacctaagccatttattcacctattttctcactctttagtgctgtttttttgt |
27528248 |
T |
|
Q |
322 |
tcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcc |
399 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||| |
|
|
T |
27528247 |
tcatttatgaaccaatcaaccattggatcagaaaatgagaggaggctacacaaaaaaggcaggagaggatccaaatcc |
27528170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 221 - 387
Target Start/End: Complemental strand, 32800723 - 32800554
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccattt---attcacctattttctctctctttagtgctgtttt |
317 |
Q |
|
|
||||||||||||||| |||||||| ||||||||||||||||| | | ||||| |||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
T |
32800723 |
ggatttggatcctcttcaaccattcctctcatgttgtttgtcttgctataatttaagccattttttattcacctattttctctctctttagtgctgattt |
32800624 |
T |
|
Q |
318 |
ttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggaga |
387 |
Q |
|
|
|||||| ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
32800623 |
ttgttcttttatgaaccaatcaactattggatcagaaaaggagaggaagctgcgcaaaaaatgcaggaga |
32800554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 494 - 711
Target Start/End: Original strand, 39241559 - 39241773
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgttt-aattcagccaatcagatttcaagccatgacacatcatatgttgggacaaatta |
592 |
Q |
|
|
|||||||||||| || || || ||| || |||||||||||||||| ||| | ||||||||||| ||| || |||| ||| |||||| |||||||| |
|
|
T |
39241559 |
cttctatgaagaagttaggaaaatgacttcttcgatgaagtcgtttgaatggggtcaatcagattttaagtgataacacgtcagatgttgagacaaattc |
39241658 |
T |
|
Q |
593 |
taatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccc |
692 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||| |
|
|
T |
39241659 |
taatatg-atcacttgcttcatatgttccaccatagacaagtttatttcatgatcttaacggttagatttacctg---tctttgttattgtggtacacca |
39241754 |
T |
|
Q |
693 |
tctacacatgatttttctt |
711 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
39241755 |
tctacacatgatttttctt |
39241773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 221 - 399
Target Start/End: Original strand, 34105859 - 34106039
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattca-cctattt---tctctctctttagtgctgttt |
316 |
Q |
|
|
||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||| |||| ||||| ||| | | |||| |||| | || ||||| |
|
|
T |
34105859 |
ggatttgaatcctctccgaccatttctctcatgcagtttgttctaccataatctaaggcattcattcagcctctctccctctccctctctcgtattgttt |
34105958 |
T |
|
Q |
317 |
tttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcc |
399 |
Q |
|
|
||||||||||||||| |||||||||||| |||||||||| |||| | ||||||||||||| |||||||| ||||||||||| |
|
|
T |
34105959 |
tttgttcatttatgagtcaatcaaccattagatcagaaaa--agagagagctgcacaaaaaaagcaggagaagatccaaatcc |
34106039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 12981521 - 12981623
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
12981521 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
12981620 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
12981621 |
ttt |
12981623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 634 - 736
Target Start/End: Complemental strand, 45348344 - 45348242
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
45348344 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
45348245 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
45348244 |
ttt |
45348242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 644 - 710
Target Start/End: Complemental strand, 45325701 - 45325635
Alignment:
Q |
644 |
gatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttct |
710 |
Q |
|
|
||||||||||||||||||| || |||||||||||||||||||| ||| |||||||||||||||||| |
|
|
T |
45325701 |
gatcttaacggttagatttaattagtctctatgttattgtggtataccatctacacatgatttttct |
45325635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 498 - 752
Target Start/End: Original strand, 19436677 - 19436931
Alignment:
Q |
498 |
tatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataata |
597 |
Q |
|
|
|||||||| || ||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |
|
|
T |
19436677 |
tatgaagaagttggggaatagactttttcggtgaagtcgtttaattcagccaatcagatttcaagccatgatacgtcatatgttgggacaaattctaata |
19436776 |
T |
|
Q |
598 |
tggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctac |
697 |
Q |
|
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
T |
19436777 |
tggatcacttgtttcatatgttccaccatagacaagtttatttcaagatcttaacagttagatttgtttggtctctatgttattgtggtacaccctatac |
19436876 |
T |
|
Q |
698 |
acatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
19436877 |
acatgatttttcttatttttccaattctctttcctctttatcactcattcatctc |
19436931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 494 - 752
Target Start/End: Complemental strand, 29834161 - 29833903
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||| ||||| ||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | | |
|
|
T |
29834161 |
cttctacgaagaagtcggggaattgacttttttggtaaagtcgtttaattcagccaatcagatttcaagccatgacatgtcagatgttgggacaaactct |
29834062 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
29834061 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacagttagatttgtttggtctctatgttattgtggtaaaccct |
29833962 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
|| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
29833961 |
ctgcacatgattttacttatttttccaattctctttcctctttatcactcattcatctc |
29833903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 494 - 662
Target Start/End: Original strand, 29258388 - 29258556
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| |||||| |||||| || ||||||| ||| |||| | | ||||||||||||||||| ||||||| ||| || ||| ||||||| | |
|
|
T |
29258388 |
cttctatgaagaagtcgggcaattgacttcttcgatgcagttgtttgaatgggccaatcagatttcaagtgatgacacgtcagataatgg-acaaattct |
29258486 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatc-ttaacggttagattt |
662 |
Q |
|
|
|| |||||||||||||| ||| ||||||||| | ||||||||||||||| ||| ||||||||||||||| |
|
|
T |
29258487 |
aacatggatcacttgctccatgtgttccaccgtggacaagtttatttcataatctttaacggttagattt |
29258556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 45972423 - 45972525
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
45972423 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
45972522 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
45972523 |
ttt |
45972525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 644 - 711
Target Start/End: Original strand, 6442636 - 6442703
Alignment:
Q |
644 |
gatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
6442636 |
gatcttaactgttagatttaattggtctctatgttattgtggtataccatctacacatgatttttctt |
6442703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 711
Target Start/End: Original strand, 34094118 - 34094184
Alignment:
Q |
645 |
atcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
|||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
34094118 |
atcttaacggttagatttaattgatctctatgttattgtggtataccatctacacatgatttttctt |
34094184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 634 - 711
Target Start/End: Original strand, 29243380 - 29243455
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||| |||||||| |||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||| |
|
|
T |
29243380 |
tttatttcatgatcttaatggttagatttacttgatctctat--tattgtggtacaccatctacacatgatttttctt |
29243455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 732
Target Start/End: Original strand, 47327942 - 47328040
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcct |
732 |
Q |
|
|
||||||||| |||||||| ||||||||| ||| ||| ||||||||||||||||| | ||||||||||| ||||||| | | |||||||||| |||| |
|
|
T |
47327942 |
tttatttcatgatcttaatagttagatttacttgatctttatgttattgtggtacaacatctacacatgaattttcttctagtaccaattctctctcct |
47328040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 20439260 - 20439328
Alignment:
Q |
223 |
atttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacct |
291 |
Q |
|
|
||||| ||||||||||||||||||| |||||| |||| | || ||||||||||| ||||| |||||||| |
|
|
T |
20439260 |
atttgtatcctctccaaccatttctatcatgtcgtttattctgccataatctaaaccattcattcacct |
20439328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 34974809 - 34974926
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgtttt-tt |
319 |
Q |
|
|
||||||||||| ||| ||| ||||||| ||| ||||||| ||| ||||||||| |||||||| |||| ||| |||||||| |||||||||| || |
|
|
T |
34974809 |
ggatttggatcttcttcaatcatttctg--atgctgtttgttctattgtaatctaagtcatttattaaccttttt---ctctctttcgtgctgttttttt |
34974903 |
T |
|
Q |
320 |
gttcatttatgaaccaatcaacc |
342 |
Q |
|
|
|||||||||||| |||||||||| |
|
|
T |
34974904 |
gttcatttatgagccaatcaacc |
34974926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 14096257 - 14096515
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| | |
|
|
T |
14096257 |
cttctatgaagaagtcggggaattgactttttcggtgaagtcgtttaattcagccaatcagatttcaagacatgacacgtcagatgttgggacaaattct |
14096356 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| || |
|
|
T |
14096357 |
aatatggatcacttgtttcatatgttccaccatagacaagtttatttcaagatcttaaccgttagatttgtttggtctctatgatattgtggtacacgct |
14096456 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
T |
14096457 |
ctacacatgatttttcttatttttccaattctatttcctctttatcactcattcatctc |
14096515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 221 - 399
Target Start/End: Complemental strand, 15819968 - 15819792
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgttttttg |
320 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| || |||||||| |||||||||||||| ||||||||||||| |
|
|
T |
15819968 |
ggatttggatcctctccaaccatttctctaatgttgtttgttctgccataatctaagtagttcattcacct-ttttctctctctttggtgctgttttttg |
15819870 |
T |
|
Q |
321 |
ttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcc |
399 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||| |
|
|
T |
15819869 |
ttcatttatgaaccaatcaaccattggatcagaaaaagaga-ggggctgcacaaaaaagacaggagaggatccaaatcc |
15819792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 222 - 396
Target Start/End: Complemental strand, 34312127 - 34311952
Alignment:
Q |
222 |
gatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttct-ctctctttagtgctgttttttg |
320 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||| ||| |||| |||| | || ||||| ||| ||||||||| |
|
|
T |
34312127 |
gatttggatcctctccaaccatttcgctcatgttgtttgttctgtcataatctaagtcattcatttacctgtttttttctttctttggtgttgttttttg |
34312028 |
T |
|
Q |
321 |
ttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaa |
396 |
Q |
|
|
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |
|
|
T |
34312027 |
ttcatttatgagccaatcaaccattggatcagaaaaaaagagggggctgcacaaaaaaggcaggagaggatccaaa |
34311952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 242 - 360
Target Start/End: Complemental strand, 41696685 - 41696567
Alignment:
Q |
242 |
atttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgttttttgttcatttatgaaccaatcaac |
341 |
Q |
|
|
|||| ||||||||| |||||||| ||||||||| | |||||||||||||| |||||| ||||||| || ||| |||||||||||||||||||||||||| |
|
|
T |
41696685 |
atttttctcatgttatttgtcctgccataatcttaaccatttattcaccttttttctatctctttgatgttgtcttttgttcatttatgaaccaatcaac |
41696586 |
T |
|
Q |
342 |
cattggatcagaaaaggag |
360 |
Q |
|
|
|||| |||||||||||||| |
|
|
T |
41696585 |
cattcgatcagaaaaggag |
41696567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 621 - 736
Target Start/End: Complemental strand, 18977200 - 18977085
Alignment:
Q |
621 |
caccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttcca |
720 |
Q |
|
|
|||||| ||||||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||| | ||||||| | | ||| |
|
|
T |
18977200 |
caccatggacaagtttatttcatgatcttaacagttagatttacttagtctctatgttattgtggtacaccatctacacataacttttcttctagtacca |
18977101 |
T |
|
Q |
721 |
attctctttcctcttt |
736 |
Q |
|
|
||| ||| |||||||| |
|
|
T |
18977100 |
attatctctcctcttt |
18977085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 634 - 736
Target Start/End: Complemental strand, 14810191 - 14810089
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
14810191 |
tttatttcatgattttaatggttagatttatttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
14810092 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
14810091 |
ttt |
14810089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 15330735 - 15330837
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
15330735 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
15330834 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
15330835 |
ttt |
15330837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 221 - 397
Target Start/End: Complemental strand, 36922716 - 36922526
Alignment:
Q |
221 |
ggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcac--ctattttctctctctttagtgctgttttt |
318 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||| | ||||||| |||| |||| |||||| | |||||||||||||| || | |||||| |
|
|
T |
36922716 |
ggatttggattctctccaaccatttctctcatgttgtttgttccgccataatttaagtcattcattcactttttttttctctctctttggtaccgttttt |
36922617 |
T |
|
Q |
319 |
t------------gttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaat |
397 |
Q |
|
|
| |||| |||||| |||||||| ||||||||||||||| ||||| |||||||||||||| ||| |||| ||||||||| |
|
|
T |
36922616 |
tttcttttctttccttcaattatgagtcaatcaactattggatcagaaaagaagaggaggctgcacaaaaaaggcatgagaggatccaaat |
36922526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 634 - 736
Target Start/End: Complemental strand, 37261773 - 37261671
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
37261773 |
tttatttcatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
37261674 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
37261673 |
ttt |
37261671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 16429864 - 16429966
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
16429864 |
tttatttcatgattttaatggttagatttacttgatctctatgttattatggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
16429963 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
16429964 |
ttt |
16429966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 17690604 - 17690706
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||| | ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
17690604 |
tttattttatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
17690703 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
17690704 |
ttt |
17690706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 494 - 580
Target Start/End: Complemental strand, 18977302 - 18977216
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgt |
580 |
Q |
|
|
|||||||||||| ||| || || ||| || ||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||| |
|
|
T |
18977302 |
cttctatgaagaagtcaggaaaatgacttcttcgatgaagtcgtttaattcagccaatcagattttaagtgatgacacgtcacatgt |
18977216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 732
Target Start/End: Original strand, 37078947 - 37079045
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcct |
732 |
Q |
|
|
||||||||| |||||||| ||||||||| ||| ||| ||||||||||||||||| | ||||||||||| ||||||| | | |||||||||| |||| |
|
|
T |
37078947 |
tttatttcatgatcttaatagttagatttacttgatctttatgttattgtggtacaacatctacacatgaattttcttctagtaccaattctctctcct |
37079045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 687
Target Start/End: Original strand, 7089225 - 7089278
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggta |
687 |
Q |
|
|
||||||||| |||||||| |||||||||| ||| ||||||||||||||||||| |
|
|
T |
7089225 |
tttatttcatgatcttaatggttagatttacttgatctctatgttattgtggta |
7089278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 33755146 - 33755075
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatt |
705 |
Q |
|
|
||||||||| ||| |||| |||||||||| ||||||| ||||||||||||||| | ||||||||||||| |
|
|
T |
33755146 |
tttatttcatgatattaatggttagatttacttggtctatatgttattgtggtatattgtctacacatgatt |
33755075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 41696549 - 41696508
Alignment:
Q |
347 |
gatcagaaaaggagagggggctgcacaaaaaatgcaggagat |
388 |
Q |
|
|
|||||||||||||||||||| | ||||||||| ||||||||| |
|
|
T |
41696549 |
gatcagaaaaggagagggggttacacaaaaaaggcaggagat |
41696508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 494 - 752
Target Start/End: Original strand, 12938643 - 12938901
Alignment:
Q |
494 |
cttctatgaagaggtcggggaattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattat |
593 |
Q |
|
|
|||||||||||| |||| | |||||| ||||| ||||||||||||||||| |||||||||||| |||| ||||||| ||| ||||||||||||||| | |
|
|
T |
12938643 |
cttctatgaagaagtcgagaaattgacttttttagtgaagtcgtttaattcaaccaatcagattttaagcgatgacacgtcagatgttgggacaaatttt |
12938742 |
T |
|
Q |
594 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
693 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
12938743 |
aatatggatcacttgcttcatatgttccaccatagacaagtttatttcaaaatcttaacggttagatttgtttggtctctatgttattgtggtacaccct |
12938842 |
T |
|
Q |
694 |
ctacacatgatttttcttatttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
12938843 |
ctacacatgatttttcttatttttccaattctctttcctctttatcactcattcatctc |
12938901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 514 - 752
Target Start/End: Original strand, 33694802 - 33695039
Alignment:
Q |
514 |
aattgaatttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttca |
613 |
Q |
|
|
|||||| ||||||| ||||||||||| | | |||||||||||| ||| ||||||| | | || ||| | ||||| |||||||||||||||||| || |
|
|
T |
33694802 |
aattgactttttcggtgaagtcgtttgaatggaccaatcagattttaagtgatgacacgttagataatggaa-aaattttaatatggatcacttgctcca |
33694900 |
T |
|
Q |
614 |
tatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttat |
713 |
Q |
|
|
||||||||| ||||||||| ||||||||| ||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
33694901 |
tatgttccatcatagacaaatttatttcatgatcttaacagttagatttatttggcctctatattattgtggtacaccctctacatatgatttttcttat |
33695000 |
T |
|
Q |
714 |
ttttccaattctctttcctctttgtcactcattcatctc |
752 |
Q |
|
|
||||| |||||| || ||||| ||||||||||||||| |
|
|
T |
33695001 |
aattccatttctctctcttctttatcactcattcatctc |
33695039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 532 - 711
Target Start/End: Complemental strand, 28138217 - 28138039
Alignment:
Q |
532 |
agtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttcatatgttccaccatagaca |
631 |
Q |
|
|
|||||||||||||||||||||| |||||||| |||||||| ||| |||| || ||||||| ||||||||| |||||||| ||||||| ||| ||| |||| |
|
|
T |
28138217 |
agtcgtttaattcagccaatcaaatttcaagtcatgacacgtcagatgtagg-acaaattttaatatggaccacttgctccatatgtcccatcatggaca |
28138119 |
T |
|
Q |
632 |
agtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||| | ||||||||||||||||||| |
|
|
T |
28138118 |
agtttatttcatgatcttaaaggttagatttacttggtctctatattattgtggtacgtcatctacacatgatttttctt |
28138039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 668
Target Start/End: Complemental strand, 14532115 - 14532051
Alignment:
Q |
604 |
acttgcttcatatgttccaccatagacaagtttatttcaagatcttaacggttagatttgtttgg |
668 |
Q |
|
|
||||||| ||||||| |||||| |||| ||||| |||| |||||||| |||||||||||||||| |
|
|
T |
14532115 |
acttgctctatatgtttcaccatggacaggtttacttcacgatcttaatggttagatttgtttgg |
14532051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 154; Significance: 3e-81; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 218 - 399
Target Start/End: Complemental strand, 29308853 - 29308672
Alignment:
Q |
218 |
gttggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgtttt |
317 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
29308853 |
gttggatttggatcctctccaaccatttctcttatgttgtttgtcctgccataatctaagccatttattcacctattttatctctctttagtgctgtttt |
29308754 |
T |
|
Q |
318 |
ttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcc |
399 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| |
|
|
T |
29308753 |
ttgttcatttatcaaccaatcaaccattggatcagaaaaggaaagggggctgcacaaaaaaggcaggagaggatccaaatcc |
29308672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 220 - 378
Target Start/End: Complemental strand, 10309316 - 10309158
Alignment:
Q |
220 |
tggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcac-ctattttctctctctttagtgctgttttt |
318 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || || |||||| | |||||||||| ||||||| || |||| |
|
|
T |
10309316 |
tggatttggatcctctccaaccatttctctcatgttgtttgttctactataatctaaacctttcattcacttttttttctctctatttagtgttg-tttt |
10309218 |
T |
|
Q |
319 |
tgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaa |
378 |
Q |
|
|
|||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||| |
|
|
T |
10309217 |
tgttcatttatgaaccaatcaaccattgaattagaaaatgagagggagctgcacaaaaaa |
10309158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 521 - 708
Target Start/End: Complemental strand, 13802869 - 13802682
Alignment:
Q |
521 |
tttttcgatgaagtcgtttaattcagccaatcagatttcaagccatgacacatcatatgttgggacaaattataatatggatcacttgcttcatatgttc |
620 |
Q |
|
|
||||||| | ||||||||| | | | |||||||||||| ||| ||||||| ||| | || |||||||||||||||||||||||||||| ||||||||| |
|
|
T |
13802869 |
tttttcggtaaagtcgtttgaatgaaccaatcagattttaagtgatgacacgtcagaagtaaggacaaattataatatggatcacttgctccatatgttc |
13802770 |
T |
|
Q |
621 |
caccatagacaagtttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgattttt |
708 |
Q |
|
|
||||||||||| |||| || | |||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||| |
|
|
T |
13802769 |
caccatagacagatttacttgatgatcttaatggttagatttgtttggtctctatcgtattatggtacaccatctacacataattttt |
13802682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 584 - 708
Target Start/End: Original strand, 23613574 - 23613699
Alignment:
Q |
584 |
gacaaattataatatggatcacttgcttcatatgttccaccatagacaagtttatttc-aagatcttaacggttagatttgtttggtctctatgttattg |
682 |
Q |
|
|
|||||||| ||||||||| |||||||| |||||||||||||| || || ||| ||| ||||||||||||||||||||||||||||||| ||| ||||| |
|
|
T |
23613574 |
gacaaattctaatatggaccacttgctcaatatgttccaccatggataactttttttttaagatcttaacggttagatttgtttggtctccatgatattg |
23613673 |
T |
|
Q |
683 |
tggtacaccctctacacatgattttt |
708 |
Q |
|
|
||||||| |||||||||||||||||| |
|
|
T |
23613674 |
tggtacagcctctacacatgattttt |
23613699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 642 - 708
Target Start/End: Original strand, 23614272 - 23614338
Alignment:
Q |
642 |
aagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgattttt |
708 |
Q |
|
|
||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| |
|
|
T |
23614272 |
aagatcttaacggttagatttgtttggtctccataatattgtggcacaccctctacacatgattttt |
23614338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 531684 - 531786
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||||| || |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
531684 |
tttatttcataattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
531783 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
531784 |
ttt |
531786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 634 - 711
Target Start/End: Complemental strand, 30945527 - 30945452
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttctt |
711 |
Q |
|
|
||||||||| |||||||| |||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||| |
|
|
T |
30945527 |
tttatttcatgatcttaatggttagatttacttgatctctat--tattgtggtacaccatctacacatgatttttctt |
30945452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 3879543 - 3879472
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatt |
705 |
Q |
|
|
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||| |
|
|
T |
3879543 |
tttatttcatgatcttaatggttagatttacttggtctctatgttattgtggtatattgtctacacatgatt |
3879472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 9189208 - 9189296
Alignment:
Q |
309 |
tgctgttttttgttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcc |
399 |
Q |
|
|
||||||||||| |||||| | |||||||||| |||||||||| |||||||||| ||| |||| |||||| || ||| ||||||||||| |
|
|
T |
9189208 |
tgctgtttttttttcattaa--aaccaatcaatcattggatcaaaaaaggagagagggttgcataaaaaaggcgaaagaggatccaaatcc |
9189296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 132; Significance: 4e-68; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 220 - 399
Target Start/End: Original strand, 371929 - 372108
Alignment:
Q |
220 |
tggatttggatcctctccaaccatttctctcatgttgtttgtcctaccataatctaagccatttattcacctattttctctctctttagtgctgtttttt |
319 |
Q |
|
|
||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| |
|
|
T |
371929 |
tggatttggatcctctccaactatttctctcatgttatttgtcctgccataatctaagtcatttattcacatattttctttctctttagtgctgcttttt |
372028 |
T |
|
Q |
320 |
gttcatttatgaaccaatcaaccattggatcagaaaaggagagggggctgcacaaaaaatgcaggagatgatccaaatcc |
399 |
Q |
|
|
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
T |
372029 |
gttcatttatgaaccaatcaaccgttggatcaaaaaaggagagggggctgcacaaaaaatgctagagaggatccaaatcc |
372108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0166 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0166
Description:
Target: scaffold0166; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 736
Target Start/End: Complemental strand, 30783 - 30681
Alignment:
Q |
634 |
tttatttcaagatcttaacggttagatttgtttggtctctatgttattgtggtacaccctctacacatgatttttcttatttttccaattctctttcctc |
733 |
Q |
|
|
||||||| | ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||| ||||| |
|
|
T |
30783 |
tttattttatgattttaatggttagatttacttgatctctatgttattgtggtacaccatctacacatgatttttcttctagtaccaattttctctcctc |
30684 |
T |
|
Q |
734 |
ttt |
736 |
Q |
|
|
||| |
|
|
T |
30683 |
ttt |
30681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 5471 - 5429
Alignment:
Q |
219 |
ttggatttggatcctctccaaccatttctctcatgttgtttgt |
261 |
Q |
|
|
|||||||| ||||||||||||||||||||||||| ||||||| |
|
|
T |
5471 |
ttggatttagatcctctccaaccatttctctcataatgtttgt |
5429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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