View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1565_high_30 (Length: 204)
Name: NF1565_high_30
Description: NF1565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1565_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9424464 - 9424266
Alignment:
| Q |
1 |
agcttgagaggaaagtataatataaccataaggagattgggagataaatgaacttacaatatcaccattagaaattcctaagttgaccaaagcagaagca |
100 |
Q |
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| T |
9424464 |
agcttgagaggaaagtataatataaccataaggagattgggagataaatgaacttacaatatcaccattagaaattcctaagttgaccaaagcagaagca |
9424365 |
T |
|
| Q |
101 |
agcttgagacatctttcataggtttctctccaagaaaatctaacatgatcattgtagatgatggaaactttgtcaccatacacaggttctgctcgttca |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
9424364 |
agcttgagacatctttcataggtttctctccaagaaaatctaacatgatcattgtagatgatggaaactttgtcaccatacacagtggctgctcgttca |
9424266 |
T |
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