View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1565_high_6 (Length: 389)
Name: NF1565_high_6
Description: NF1565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1565_high_6 |
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[»] scaffold0289 (1 HSPs) |
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[»] scaffold0041 (1 HSPs) |
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[»] scaffold0032 (1 HSPs) |
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[»] scaffold0003 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 19 - 372
Target Start/End: Complemental strand, 8457441 - 8457086
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccaca |
118 |
Q |
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|
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
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|
T |
8457441 |
gaactgtattgatatcaagtcaatgggatatcagaagccacaaacgaccgtaatgatcacaattaaaaaacaaatggtttttatcctctacacccccaca |
8457342 |
T |
|
Q |
119 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
218 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
8457341 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccgcagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
8457242 |
T |
|
Q |
219 |
ttaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactg |
318 |
Q |
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|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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|
T |
8457241 |
ttaacctttaacgaaaccgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcacgg |
8457142 |
T |
|
Q |
319 |
tgtatttgttggaagggtaaagttttcac--acacctatcagccatgtcaacctac |
372 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
T |
8457141 |
tgtatttgttggaagggtaaagttttcacacacacctatcagccatgtcaacctac |
8457086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 23 - 368
Target Start/End: Complemental strand, 18815646 - 18815299
Alignment:
Q |
23 |
tgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaa |
122 |
Q |
|
|
|||||||||| |||| ||| ||||||| ||||| || ||||||| ||| |||||||||||| |||||||||||| | | ||||||||| ||||||||||| |
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|
T |
18815646 |
tgtattgataccaagccaatgggatatcagaagtcaaaaacgactgtagtgatcacacttacaaaacaaatggtctttgtcctctacagccccacatgaa |
18815547 |
T |
|
Q |
123 |
gtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaa |
222 |
Q |
|
|
| ||||||||| ||| ||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||| |
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|
T |
18815546 |
accgcacaagataccagggaaacatccagaacattcctcttcctcagattatcctttgtagcaagtctattcagaaagagacgctagacaaatatattaa |
18815447 |
T |
|
Q |
223 |
cctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta |
322 |
Q |
|
|
||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||| ||||| |
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|
T |
18815446 |
cctttaacggaaccgctttatgccacaaaaaatgatgaaaatcctcagtaatattagggtcaaccgctgttaagtaagaataagcagattgcacggtgta |
18815347 |
T |
|
Q |
323 |
tttgttggaagggtaaagttttcacac--acctatcagccatgtcaac |
368 |
Q |
|
|
|||||||||||| | |||||| ||||| |||||||||||||| |||| |
|
|
T |
18815346 |
tttgttggaaggatgaagtttccacaccaacctatcagccatgccaac |
18815299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 370
Target Start/End: Complemental strand, 27987821 - 27987471
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccaca |
118 |
Q |
|
|
||||||||| ||||||||| ||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||| | | | ||||||| ||||||| |
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|
T |
27987821 |
gaactgtatcgatatcaagccaatgggatatcagaagccacaaacgac--tagtgatcacacttaaaaaacaaatggtctttgttctctacagccccaca |
27987724 |
T |
|
Q |
119 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
218 |
Q |
|
|
||||| | ||||||||| ||||||||||||||||| |||| |||||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
T |
27987723 |
tgaagccgcacaagataccagtgaaacatccagaatattt-tcttccgtagattatcctttgtagcaagtctattcagaaagagacgccatacaaaaata |
27987625 |
T |
|
Q |
219 |
ttaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactg |
318 |
Q |
|
|
||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||| |||||||| |
|
|
T |
27987624 |
ttaacctttaacggaaccgctttatgccacaaaaaatgatgaaaatcctcagtaatattagtatcaaccgctgttaagtaagaatacgtagattgcaaga |
27987525 |
T |
|
Q |
319 |
tgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacct |
370 |
Q |
|
|
|||||||||||||| ||| |||||| |||| ||||||||||||||| |||||| |
|
|
T |
27987524 |
tgtatttgttggaatggtgaagtttccacacccacctatcagccatgccaacct |
27987471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 323
Target Start/End: Original strand, 24819811 - 24819966
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| | ||| |||||| |||| |||| |||| |||||| |
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|
T |
24819811 |
agattatcctttgtagcaagtctattcagaaaaagccgccaaacaaaaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctg |
24819910 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat |
323 |
Q |
|
|
|||| |||||| |||| || | ||||||||||||||| ||||| ||||| |||||| |
|
|
T |
24819911 |
cagtgatgttagtgtccactgctgttaagtaagaataagcagaatgcaccgtgtat |
24819966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 312
Target Start/End: Original strand, 5196636 - 5196891
Alignment:
Q |
57 |
cacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacat |
156 |
Q |
|
|
|||||||||||||| || || ||||||||||| ||||||| || ||||||| | |||||| | | | ||||||| | | |||||||| || |||| |
|
|
T |
5196636 |
cacaaacgaccgtagtggtcgcacttaaaaaataaatggtccctgtcctctaactcaccacataaggccgcacaagacacatgggaaacatcaagcacat |
5196735 |
T |
|
Q |
157 |
ttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatg |
256 |
Q |
|
|
|||||| |||| || |||||||||| |||||||||| |||||||| || |||| ||| ||||| || |||||||||| || ||| ||||| |||||| |
|
|
T |
5196736 |
atctcttgcacaaattatcctttgtagcaagtctatttagaaagagtcgtcagataaagatattcacttttaacgaaatcgccttaagccac-aaaaatt |
5196834 |
T |
|
Q |
257 |
atgaaaatcctc-agtaatgttattgtcaaccgttgttaagtaagaatacgcagatt |
312 |
Q |
|
|
|| ||| || | |||||||||| |||||||||| || ||||||||||| ||||||| |
|
|
T |
5196835 |
atcaaaccccaccagtaatgttaatgtcaaccgtcgtgaagtaagaataagcagatt |
5196891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 40891866 - 40891739
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
40891866 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctgcagtga |
40891767 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
||||| |||| |||| |||||||||||| |
|
|
T |
40891766 |
tgttagtgtccaccgctgttaagtaaga |
40891739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 12121682 - 12121855
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| | || |||||| |||| |
|
|
T |
12121682 |
agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccata |
12121781 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat |
323 |
Q |
|
|
|||| |||| ||||| |||| |||||| | || |||| |||||| |||||||| || || ||||| |||||| |
|
|
T |
12121782 |
aaaattgatcaaaatttgcagtgatgttagtctccaccgctgttaaataagaataagctgaatgcaccgtgtat |
12121855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 586904 - 587028
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| | ||| |||||| |||| ||||| ||| ||| || |||| | |
|
|
T |
586904 |
tcctttgtagcaagtctattcaaaaagagacgccaaacaaaaatattaacctttaagggaaccgctttaagccataaaaaacgatcaaactctgcagtga |
587003 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagta |
298 |
Q |
|
|
||||| ||| |||| ||||||||| |
|
|
T |
587004 |
tgttagagtcgaccgctgttaagta |
587028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 20705627 - 20705542
Alignment:
Q |
141 |
gaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt |
226 |
Q |
|
|
||||| || ||||| |||||||| | ||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |
|
|
T |
20705627 |
gaaacctcaagaacgtttctcttgcgcagattatcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctt |
20705542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 20873671 - 20873586
Alignment:
Q |
141 |
gaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt |
226 |
Q |
|
|
||||| || ||||| |||||||| | ||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |
|
|
T |
20873671 |
gaaacctcaagaacgtttctcttgcgcagattatcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctt |
20873586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 22865847 - 22865783
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||| |
|
|
T |
22865847 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt |
22865783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 47548969 - 47549033
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||| |
|
|
T |
47548969 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt |
47549033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 47553412 - 47553476
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||| |
|
|
T |
47553412 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt |
47553476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 27869019 - 27869076
Alignment:
Q |
173 |
atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaac |
230 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||| |
|
|
T |
27869019 |
atcctttgtagcaagtctattcagaaagagacgccaaacaaatatgttaacctttaac |
27869076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 34981961 - 34982112
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||| | |||||||||||| | ||| |||||||||||||||||||| | || |||||| |||| |||| |||| ||| || |
|
|
T |
34981961 |
agattatcctttgtagcaaggcgattcagaaagagcctccaaacaaaaatattaacctttaaagggaccgctttaagccataaaaactgatcaaactctg |
34982060 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt |
319 |
Q |
|
|
|| | || ||| | || |||||||||||||||||||| || || |||||||| |
|
|
T |
34982061 |
cattgatattagtatccaccgttgttaagtaagaataagctgaatgcactgt |
34982112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 36575490 - 36575394
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaat |
264 |
Q |
|
|
|||| |||||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| | ||| |||||| |||| |||| |||| ||||| |
|
|
T |
36575490 |
agattatcctttgtagcaagtctattcagaaaaagccgccaaacaaaaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaat |
36575394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 301
Target Start/End: Complemental strand, 37075698 - 37075565
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||| |||| ||||||| | ||| |||||||||||||| ||||| | ||| |||||| |||| |||| |||| ||| || |
|
|
T |
37075698 |
agattatcctttgtagcaagtcgattctgaaagagcctccaaacaaaaatattaacttttaaaggaaccgctttaagccataaaaattgatcaaactctg |
37075599 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
|||| || ||| | || |||||||||||| |||| |
|
|
T |
37075598 |
cagtgatattagtatccaccgttgttaagaaaga |
37075565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 179; Significance: 2e-96; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 19 - 370
Target Start/End: Original strand, 26995929 - 26996281
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccaca |
118 |
Q |
|
|
||||||||| |||| |||| ||| | ||||| ||||||||||||||||| || |||||||| || |||||||||| || ||||||||||| | | |||| |
|
|
T |
26995929 |
gaactgtatcgataccaagccaatgagatatcagaagccacaaacgaccatagtgatcaca-ttgaaaaacaaatagtctctatcctctatagtctcaca |
26996027 |
T |
|
Q |
119 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
218 |
Q |
|
|
||||| ||||||||||| |||| ||||||||||||||||||||| || || |||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
T |
26996028 |
tgaagccacacaagatacttgtgagacatccagaacatttctcttctgcaaattatcctttgcaccaagtctattcagaaagagacgccagacaaaaata |
26996127 |
T |
|
Q |
219 |
ttaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactg |
318 |
Q |
|
|
||||||||||||| || ||||| | |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | |
|
|
T |
26996128 |
ttaacctttaacggaatcgctttcttccacaaaaaatgatgaaaatcctcagtaatattattatcaaccgttgttaagtaagaataagcagattgcacgg |
26996227 |
T |
|
Q |
319 |
tgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacct |
370 |
Q |
|
|
|||||||||||||||||| ||||| |||| |||||||||||||||||||||| |
|
|
T |
26996228 |
tgtatttgttggaagggtgtagtttccacacccacctatcagccatgtcaacct |
26996281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 23 - 370
Target Start/End: Complemental strand, 24545310 - 24544962
Alignment:
Q |
23 |
tgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaa-caaatggtttctatcctctacacccccacatga |
121 |
Q |
|
|
||||| |||| |||| ||| ||||||| | ||| ||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||| ||||| |||| |
|
|
T |
24545310 |
tgtatcgataccaagccaatgggatatcataaggcacaaacgatcgtagtgatcacacttaaaaaaacaaatggtctctatcctctacagccccaaatga |
24545211 |
T |
|
Q |
122 |
agtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatatta |
221 |
Q |
|
|
|| | ||||||||| |||||||||||| |||||||||||||| | |||| |||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
T |
24545210 |
agccgcacaagataccagtgaaacatc-agaacatttctctttcgaagattatcctttgtagcaagtctgttcagaaagagacgccagacaaaaatatta |
24545112 |
T |
|
Q |
222 |
acctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgt |
321 |
Q |
|
|
|| ||||||| ||| ||||||| ||| ||||||||||||| |||||||||| ||||| ||||| || | ||||||||||||||||||||| |||| ||| |
|
|
T |
24545111 |
acttttaacggaaccactttatgacac-aaaaatgatgaaattcctcagtaacgttatcgtcaatcgctattaagtaagaatacgcagattacactatgt |
24545013 |
T |
|
Q |
322 |
atttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacct |
370 |
Q |
|
|
||||||||||||| | |||||| |||| |||||||||||| || |||||| |
|
|
T |
24545012 |
atttgttggaaggatgaagtttccacacccacctatcagccgtgccaacct |
24544962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 40392670 - 40392882
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccaca |
118 |
Q |
|
|
||||||||| |||| |||||||| | ||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||| |
|
|
T |
40392670 |
gaactgtatcgataccaagtcaatgagatatcagaagccacaaacaaccgtagtgatcacacttgaaaaacaaatggtgtctatcctctacagccccaca |
40392769 |
T |
|
Q |
119 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
218 |
Q |
|
|
||||| | || |||||| |||||||||||||||||| |||| ||| || || |||||| || ||||||||| | ||| || ||||||||||||||| |
|
|
T |
40392770 |
tgaagccgcataagatacttgtgaaacatccagaacatatctcgtccgcaaattgtcctttatagtaagtctatttaaaaaaagtcgccagacaaaaata |
40392869 |
T |
|
Q |
219 |
ttaacctttaacg |
231 |
Q |
|
|
||||||||||||| |
|
|
T |
40392870 |
ttaacctttaacg |
40392882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 304
Target Start/End: Complemental strand, 28521059 - 28520809
Alignment:
Q |
54 |
agccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaa |
153 |
Q |
|
|
|||||||| |||||||| || |||||||||||||||||||||| || ||||||| | |||||| | ||| ||||||| | || || ||||| |||| |
|
|
T |
28521059 |
agccacaatcgaccgtagtggtcacacttaaaaaacaaatggtccctgtcctctaactcaccacataaggtcgcacaagacacaagggagacatcaagaa |
28520960 |
T |
|
Q |
154 |
catttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaa |
253 |
Q |
|
|
|||| ||| | |||| || ||||| |||| ||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||| ||||| |||| |
|
|
T |
28520959 |
cattcctcatacacaaattatcctctgtagcaagtctattcaggaagagacgccatacaaatatattcacctttaacgaaaccgctttaagccacaaaaa |
28520860 |
T |
|
Q |
254 |
atgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||||||| || ||| | |||||| |||||||| ||||||| |||||||| |
|
|
T |
28520859 |
ttgatgaaactcttcaatgatgttaatgtcaaccattgttaaataagaata |
28520809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 323
Target Start/End: Original strand, 10004045 - 10004200
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| ||||||||||||||||||| ||||| |||||||||| || ||||| | ||| |||||| |||| |||| |||| |||||| |
|
|
T |
10004045 |
agattatcctttgtagcaagtctattcagaaagagccgccaagcaaaaatattgacttttaaaggaaccgctttaagccataaaaattgatcaaaatctg |
10004144 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat |
323 |
Q |
|
|
|||| |||||| |||| |||| ||||||||||||||| ||||| ||||| |||||| |
|
|
T |
10004145 |
cagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgcaccgtgtat |
10004200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 323
Target Start/End: Original strand, 27030066 - 27030221
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| ||||||| || |||||||||||| ||| || ||||| ||||||||||| || ||||| | ||| |||||| |||| |||| |||| |||||| |
|
|
T |
27030066 |
agattatcctttatagcaagtctattcaaaaaaagccgccaaacaaaaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctg |
27030165 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat |
323 |
Q |
|
|
|||| |||||| |||| |||| ||||||||||||||| ||||| ||||| |||||| |
|
|
T |
27030166 |
cagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgcaccgtgtat |
27030221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 41342910 - 41342783
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
41342910 |
tcctttgtagcaaatctattcagaaagagacgccaaacaaaaatgttaacttttaaaggaaccgctttaagccataaaaattgatcaaactctgcagtga |
41342811 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
||||| | || |||| |||||||||||| |
|
|
T |
41342810 |
tgttagtatccaccgctgttaagtaaga |
41342783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 37668976 - 37669030
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacg |
231 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |
|
|
T |
37668976 |
tttgtatcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacg |
37669030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 49369887 - 49370014
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| | |||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
49369887 |
tcctttgtagcaagtctattcagaaagagacgccaaaaaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctgcagtga |
49369986 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
| || |||| ||||||||||| ||||| |
|
|
T |
49369987 |
tattggtgtccaccgttgttaaataaga |
49370014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 19 - 370
Target Start/End: Original strand, 11030 - 11382
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccaca |
118 |
Q |
|
|
||||||||| |||| |||| ||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | || |||| |
|
|
T |
11030 |
gaactgtatcgataccaagccaatgggagatcaaaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttatgtcctctaaatccacaca |
11129 |
T |
|
Q |
119 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
218 |
Q |
|
|
||||| |||| |||||| ||| || ||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||| || ||||| ||| |
|
|
T |
11130 |
tgaagccacataagataccagggagacatctagaacatttctcttccgcagattatcctttgtagaaagtctattcaggaagagacatcatacaaatata |
11229 |
T |
|
Q |
219 |
ttaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactg |
318 |
Q |
|
|
||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||| ||||||||||| | |
|
|
T |
11230 |
ttaacctttaacggaacctctttgtgccacaaaaaatgatgaaaatcctcagtaatattagtgtcaactgctgttaagtaagaataagcagattgcacag |
11329 |
T |
|
Q |
319 |
tgtatttgttggaagggtaaagttttcaca-cacctatcagccatgtcaacct |
370 |
Q |
|
|
||||||| || ||||||| ||||| |||| || | |||||||||| |||||| |
|
|
T |
11330 |
tgtatttattcgaagggtggagtttccacaccatccatcagccatgccaacct |
11382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 138; Significance: 5e-72; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 19 - 333
Target Start/End: Original strand, 24059608 - 24059924
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccaca |
118 |
Q |
|
|
||||||||| |||| |||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
24059608 |
gaactgtatcgataccaagccaatgggatatcagaagccacaaacgaccgtagtgatcacacttaaaaaacaaatggtctctatcctctacagccccaca |
24059707 |
T |
|
Q |
119 |
tgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaata |
218 |
Q |
|
|
||||| | |||||||| | |||||||||||||||| | |||| ||| || || ||||||||| |||||||| ||| ||||||||| || ||||||||| |
|
|
T |
24059708 |
tgaagccgtacaagatacctgtgaaacatccagaacctgtctcgtccgcaaattgtcctttgtagcaagtctactcataaagagacgtcaaacaaaaata |
24059807 |
T |
|
Q |
219 |
ttaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattg--cac |
316 |
Q |
|
|
||||| ||||||||||| | |||||| | ||||||| ||||||||||| |||| |||||||||| |||||||||||||||| ||| |||| ||| |
|
|
T |
24059808 |
ttaacttttaacgaaaccgttttatgttatagaaaatgacgaaaatcctcactaatattattgtcaaatattgttaagtaagaataagcatattgtacac |
24059907 |
T |
|
Q |
317 |
tgtgtatttgttggaag |
333 |
Q |
|
|
|||||||||||||||| |
|
|
T |
24059908 |
ggtgtatttgttggaag |
24059924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 370
Target Start/End: Original strand, 25135450 - 25135622
Alignment:
Q |
200 |
gagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctca-gtaatgttattgtcaaccgttgttaagta |
298 |
Q |
|
|
||||||| ||||||| |||||||||||||| | ||| |||||| |||| |||||| ||||||||| | | ||||| ||| ||||||||| |||||| || |
|
|
T |
25135450 |
gagacgctagacaaatatattaacctttaatggaaccgctttaagccaaaaaaaattatgaaaatcttaaagtaatattagtgtcaaccgctgttaaata |
25135549 |
T |
|
Q |
299 |
agaatacgcagattgcactgtgtatttgttggaagggtaaag-ttttcacacacctatcagccatgtcaacct |
370 |
Q |
|
|
|||||| ||||||||||| |||||||||| |||||| | ||| || ||| ||||||||||||||| |||||| |
|
|
T |
25135550 |
agaataagcagattgcacggtgtatttgtgggaaggatgaagcttcccacccacctatcagccatgccaacct |
25135622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 23158276 - 23158122
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| | ||||||||| |||| |
|
|
T |
23158276 |
agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaaggggactgctttaagccata |
23158177 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| |||| ||||| |||| |||||| |||| |||| ||||||||||||||| |
|
|
T |
23158176 |
aaaattgatcaaaatatgcagtgatgttagtgtccaccgctgttaagtaagaata |
23158122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 36279329 - 36279175
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| | ||| |||||| |||| |
|
|
T |
36279329 |
agaacattcctcttacgaagattatcctttgtagcaagtctattcagaaagaaccgccaaacaaaaatattaacttttaagggaaccgctttaagccata |
36279230 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| |||| |||||| |||| |||||| |||| |||| ||||||||||||||| |
|
|
T |
36279229 |
aaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaata |
36279175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 51872781 - 51872954
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| | || |||||| |||| |
|
|
T |
51872781 |
agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccata |
51872880 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat |
323 |
Q |
|
|
|||| ||| |||||| |||| |||||| |||| ||| |||||| |||||||| || || ||||| |||||| |
|
|
T |
51872881 |
aaaattgaacaaaatctgcagtgatgttagtgtctgccgctgttaaataagaataagctgaatgcaccgtgtat |
51872954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 8111038 - 8111111
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||| |||| |
|
|
T |
8111038 |
tcctttgttgcaagtctattcagaaagagacgccatacaaaaatattaacctttaatggaaccgctttaagcca |
8111111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 17826883 - 17826738
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| |||| |||| |||| ||| || |||| | |
|
|
T |
17826883 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaaggaaaccactttaagccataaaaattgatcaaactctacagtga |
17826784 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt |
319 |
Q |
|
|
| || |||| ||||||||||| ||||| || || || |||||||| |
|
|
T |
17826783 |
tattgatgtccaccgttgttaaataagagtaagctgaatgcactgt |
17826738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 15649175 - 15649024
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||| | |||||||||||| | ||| |||||||||||||||||||| | ||||||||| |||| | ||||||| ||| || |
|
|
T |
15649175 |
agattatcctttgtagcaaggcgattcagaaagagcctccaaacaaaaatattaacctttaaagggactgctttaagccataataaatgatcaaactctg |
15649076 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt |
319 |
Q |
|
|
|| | || ||| | || |||||||||||||||||||| || || |||||||| |
|
|
T |
15649075 |
cattgatattagtatccaccgttgttaagtaagaataagctgaatgcactgt |
15649024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 18116484 - 18116357
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||| ||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
18116484 |
tcctttgtagcaaatctattcagaaagagacgccaaacaaaaatgttaacttttaaaggaaccgctttaagccataaaaattgatcaaactctgcagtga |
18116385 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
||||| | || |||| |||||||||||| |
|
|
T |
18116384 |
tgttagtatccaccgctgttaagtaaga |
18116357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 29123541 - 29123410
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa-cgaaactgctttatgccacgaaaaatgatgaaaatcctcagta |
272 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||| |||| |||| |||| ||| || |||| |
|
|
T |
29123541 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaagggaaaccgctttaagccataaaaattgatcaaactctgcagtg |
29123442 |
T |
|
Q |
273 |
atgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|| || |||| ||||||||||| |||||||| |
|
|
T |
29123441 |
atattgatgtccaccgttgttaaataagaata |
29123410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 4303304 - 4303231
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||| |||| |
|
|
T |
4303304 |
tcctttgtagcaagtctattcagaaaaagacgccaaacaaaaatattaacttttaagggaaccgctttaagcca |
4303231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 12915913 - 12915985
Alignment:
Q |
176 |
ctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccac |
248 |
Q |
|
|
||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||| ||| || ||| ||||| |
|
|
T |
12915913 |
ctttgtagcaattctattcagaaagagacgccaaacaaaaatgttaacctttaacggaaccgccttaagccac |
12915985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 36951324 - 36951388
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||||| |
|
|
T |
36951324 |
tttgtagcaagtctattcagaaagagacgccatacaaaaatgttaaccttcaacggaaccgcttt |
36951388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 50693853 - 50693789
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||||| |
|
|
T |
50693853 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaaccgcttt |
50693789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 3621622 - 3621677
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa |
229 |
Q |
|
|
|||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
T |
3621622 |
tcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctttaa |
3621677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 22340699 - 22340829
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| |||||||||| |||||||||||||| |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| | |||| | |
|
|
T |
22340699 |
tcctttgtagcaagtctatttagaaagagacgccaaacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaacactgcagtga |
22340798 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
| || |||| ||||||||||| |||||||| |
|
|
T |
22340799 |
tattgatgtccaccgttgttaaataagaata |
22340829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 25135278 - 25135407
Alignment:
Q |
53 |
aagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccaga |
152 |
Q |
|
|
||||||||| ||||| | ||||| ||||||||||||||||||| | | ||||||| ||||||| |||| | ||||||| || || ||||||||| |
|
|
T |
25135278 |
aagccacaatcgaccaaagtgatcgcacttaaaaaacaaatggtctttgtcctctaataccccacaagaagccgcacaagaagctagggagacatccaga |
25135377 |
T |
|
Q |
153 |
acatttctcttccacagataatcctttgta |
182 |
Q |
|
|
||||||||||||| || || |||||||||| |
|
|
T |
25135378 |
acatttctcttccgcaaattatcctttgta |
25135407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 17469223 - 17469159
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| |||||||||||||||||||| |||| |||||||| |||||||| |||| ||| ||||| |
|
|
T |
17469223 |
tttgtagcaagtctattcagaaagagatgccaaacaaaaatgttaaccttcaacggaaccgcttt |
17469159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 17228056 - 17228198
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| |||||||||| |||||||||||||||||||| || || || ||||||| |||||||||| ||||| ||||||||||||| || ||||| | |
|
|
T |
17228056 |
tcctttgtagcaagtctatttagaaagagacgccagacaaatatgttcacatttaacggaactgctttaagccacaaaaaatgatgaaactcttcagtga |
17228155 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaatacgcagattgcac |
316 |
Q |
|
|
| ||| ||||||||| |||||| ||||||||||| |||||||| |
|
|
T |
17228156 |
ttttagtgtcaaccgctgttaaataagaatacgccgattgcac |
17228198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 323
Target Start/End: Original strand, 2894351 - 2894506
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||||||||||||| || ||||| |||||||||||||| ||||| | ||| |||||| |||| ||| |||| |||||| |
|
|
T |
2894351 |
agattatcctttgtagcaagtctattcagaaaaagccgccaaacaaaaatattaacttttaagggaaccgctttaagccatagaaattgatcaaaatctg |
2894450 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat |
323 |
Q |
|
|
|||| |||||| | || |||| ||||||||||||||| ||||| ||||| |||||| |
|
|
T |
2894451 |
cagtgatgttagtatccaccgctgttaagtaagaataagcagaatgcaccgtgtat |
2894506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 7218453 - 7218361
Alignment:
Q |
173 |
atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatc |
265 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||| ||| || ||| |||| |||| ||||||||||| |
|
|
T |
7218453 |
atcctttgtagcaagtctattcagaaaaagacgccaaacaaaaatgttaacctttaacggaaccgccttaagccataaaaattgatgaaaatc |
7218361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 18295522 - 18295368
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| | || |||||| |||| |
|
|
T |
18295522 |
agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccata |
18295423 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| |||| ||||| |||| |||||| | || |||| |||||| |||||||| |
|
|
T |
18295422 |
aaaattgatcaaaatatgcagtgatgttagtatccaccgctgttaaataagaata |
18295368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 319
Target Start/End: Original strand, 667385 - 667530
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | ||| ||||| |||| |||| |||| ||| || |||| | |
|
|
T |
667385 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacctttaagggaaccactttaagccataaaaattgattaaactctgcagtga |
667484 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt |
319 |
Q |
|
|
|||| |||| |||| |||||| ||||| || || || |||||||| |
|
|
T |
667485 |
tgttgatgtccaccgctgttaaataagagtaagctgaatgcactgt |
667530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 28604989 - 28604934
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa |
229 |
Q |
|
|
|||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
T |
28604989 |
tcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctttaa |
28604934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 20007463 - 20007602
Alignment:
Q |
19 |
gaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctaca-cccccac |
117 |
Q |
|
|
||||| ||| |||| |||| ||| ||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| |
|
|
T |
20007463 |
gaactatatcgataccaagccaatgggatatcagaagccacaaacaaccgtagtgatcacactt-aaaaacaaatggtctctatcctctacagaacccac |
20007561 |
T |
|
Q |
118 |
atgaagtcacacaagatatcagtgaaacatccagaacattt |
158 |
Q |
|
|
|||||| |||||||||| | |||||||||| ||||||||| |
|
|
T |
20007562 |
atgaagctacacaagatacctgtgaaacatctagaacattt |
20007602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 30275985 - 30276139
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| | ||||||||||||||||| | ||| |||||||||||||| ||||| | ||| |||||| |||| |
|
|
T |
30275985 |
agaacattcctcttgcgaagattatcctttgtagcgagtctattcagaaagagcctccaaacaaaaatattaacttttaagggaaccgctttaagccata |
30276084 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| |||| |||||| |||| |||||| |||| |||| ||||||||||||||| |
|
|
T |
30276085 |
aaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaata |
30276139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 316
Target Start/End: Original strand, 1258561 - 1258723
Alignment:
Q |
154 |
catttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaa |
253 |
Q |
|
|
||||||| || |||| || ||| |||||| ||||||||||||||||||||||| | ||||| || |||||||| |||| ||| ||||| ||| |||| |
|
|
T |
1258561 |
catttcttttacacaaattatcttttgtagcaagtctattcagaaagagacgcaaaacaaatatgttaaccttcaacggaaccgcttttaaccataaaaa |
1258660 |
T |
|
Q |
254 |
atgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcac |
316 |
Q |
|
|
|||| |||||| |||| ||||||| |||| |||| |||||||| ||||| || |||||||| |
|
|
T |
1258661 |
ttgattaaaatcttcagaaatgttagtgtccaccgccgttaagtacgaataagccgattgcac |
1258723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 304
Target Start/End: Original strand, 23384957 - 23385093
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| || |||||||||||||||| ||||| |||||||||||||| ||||| | ||| |||||| |||| |||| |||| ||| || |
|
|
T |
23384957 |
agattatcctttgtagcatgtctattcagaaagagccgccaaacaaaaatattaacttttaaaggaaccgctttaagccataaaaattgatcaaactctg |
23385056 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| || ||| | || ||| ||||||||||||||| |
|
|
T |
23385057 |
cagtgatattagtatccaccactgttaagtaagaata |
23385093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 304
Target Start/End: Original strand, 32349993 - 32350124
Alignment:
Q |
173 |
atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagta |
272 |
Q |
|
|
|||||||||| ||||||||||||||||||| | | | |||||||||||||| ||||| | || |||||| |||| |||| |||| |||||| |||| |
|
|
T |
32349993 |
atcctttgtagcaagtctattcagaaagagccacgaaacaaaaatattaacttttaagggaatcgctttaagccataaaaattgatcaaaatctgcagtg |
32350092 |
T |
|
Q |
273 |
atgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|| ||| | || |||| ||||||||||||||| |
|
|
T |
32350093 |
atattagtatccaccgctgttaagtaagaata |
32350124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 304
Target Start/End: Original strand, 21963522 - 21963658
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||| |||||||||||| | ||| |||||||||||||| ||||| | || |||||| |||| |||| |||| ||| || |
|
|
T |
21963522 |
agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatattaacttttaaagggaccgctttaagccataaaaattgatcaaactctg |
21963621 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| | ||| | || |||||||||||||||||||| |
|
|
T |
21963622 |
cagtgagattagtatccaccgttgttaagtaagaata |
21963658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 304
Target Start/End: Original strand, 21964707 - 21964843
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||| |||||||||||| | ||| |||||||||||||| ||||| | || |||||| |||| |||| |||| ||| || |
|
|
T |
21964707 |
agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatattaacttttaaagggaccgctttaagccataaaaattgatcaaactctg |
21964806 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| | ||| | || |||||||||||||||||||| |
|
|
T |
21964807 |
cagtgagattagtatccaccgttgttaagtaagaata |
21964843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 38938592 - 38938665
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
||||||||| |||||||||||||||||||||||| |||||||| |||| ||||| | ||| |||||| |||| |
|
|
T |
38938592 |
tcctttgtagtaagtctattcagaaagagacgccaaacaaaaatgttaatttttaagggaaccgctttaagcca |
38938665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 27914709 - 27914654
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaac |
223 |
Q |
|
|
|||| |||||||||| |||||||||||||||||| || || |||||||||||||| |
|
|
T |
27914709 |
agattatcctttgtagcaagtctattcagaaagaaccgtcaaacaaaaatattaac |
27914654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 322
Target Start/End: Original strand, 3514780 - 3514952
Alignment:
Q |
150 |
agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg |
249 |
Q |
|
|
|||||||| ||||| | |||| |||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| | || |||||| |||| |
|
|
T |
3514780 |
agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagaaccgccaaacaaaaatattaacttttaagggtaccgctttaagccata |
3514879 |
T |
|
Q |
250 |
aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta |
322 |
Q |
|
|
|||| |||| |||||| |||| |||||| |||| |||| ||||||||||||||| || || ||||| ||||| |
|
|
T |
3514880 |
aaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaataagctgaatgcaccgtgta |
3514952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 322
Target Start/End: Original strand, 48547674 - 48547822
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| |||| |||| ||| || |||| | |
|
|
T |
48547674 |
tcctttgttgcaagtctattcagaaagagacgccagacaaaaatattaacctttaatggaactgctttaagccataaaaattgattaaactctgcagtga |
48547773 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta |
322 |
Q |
|
|
|||| ||| ||||| ||||| |||||||| || || ||||| ||||| |
|
|
T |
48547774 |
tgttgaagtccaccgtcgttaaataagaataagctgaatgcaccgtgta |
48547822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 9819174 - 9819322
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||||||||||||| || ||||| ||| ||||||| || ||||| | ||| |||||| |||| |||| |||| |||||| |
|
|
T |
9819174 |
agattatcctttgtagcaagtctattcagaaaaagccgccaaacataaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctg |
9819273 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcac |
316 |
Q |
|
|
|||| |||||| |||| |||| ||||||||||||||| ||||| ||||| |
|
|
T |
9819274 |
cagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgcac |
9819322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 23603382 - 23603512
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||| ||| ||||||||||||||||||| ||||| |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| ||| || | | |
|
|
T |
23603382 |
tccttagtagcaagtctattcagaaagagtcgccaaacaaaaatgttaacttttaaaggaaccgctttaagccataaaaattgatcaaactccgcaatga |
23603481 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
| |||||||| |||||||||||||||||||| |
|
|
T |
23603482 |
tattattgtccaccgttgttaagtaagaata |
23603512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 23571723 - 23571596
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| |||||||||||||||||||||| || |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
23571723 |
tcctttgtagcaagtctattcagaaagagacgtcatacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctacagtga |
23571624 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
||||| |||| |||| |||||||||||| |
|
|
T |
23571623 |
tgttagtgtccaccgctgttaagtaaga |
23571596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 42462840 - 42462970
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| |||||||||||||||||| |||||| |||||||| ||||| ||||| | | | | |||| |||| |||| |||| ||| || |||||| |
|
|
T |
42462840 |
tcctttgtagcaagtctattcagaaagaaacgccaaacaaaaatgttaacttttaagggagccgttttaagccataaaaattgatcaaactctgcagtaa |
42462939 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| |||| ||||||||||| |||||||| |
|
|
T |
42462940 |
tgttgatgtccaccgttgttaaataagaata |
42462970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 8595377 - 8595450
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| |||| |
|
|
T |
8595377 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaaaggaaccgctttaagcca |
8595450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 16664099 - 16664163
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||||| |
|
|
T |
16664099 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaaccgcttt |
16664163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 39632931 - 39632867
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||||| |
|
|
T |
39632931 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaaccgcttt |
39632867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 10754162 - 10754250
Alignment:
Q |
153 |
acatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||||| || |||| || ||| |||||| |||||||||||| |||||||||||| ||||| || |||||||| |||| ||| ||||| |
|
|
T |
10754162 |
acatttcttttacacaaattatcttttgtagcaagtctattcataaagagacgccaaacaaagatgttaaccttcaacggaaccgcttt |
10754250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 52196409 - 52196473
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||| ||||| |||||||| |||||||| |||| ||| ||||| |
|
|
T |
52196409 |
tttgtagcaagtctattcagaaagaggcgccaaacaaaaatgttaaccttcaacggaaccgcttt |
52196473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 17153915 - 17153836
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
|||| |||||||||| |||||||||||| |||||| ||||| | |||||||||||| ||||| | ||| |||||| |||| |
|
|
T |
17153915 |
agattatcctttgtagcaagtctattcataaagagccgccaaataaaaatattaacttttaatggaaccgctttaagcca |
17153836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 42459405 - 42459278
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||| |||||||||||| ||||| || |||||||| ||||||||||||| ||| | ||| |||| | || || | |||||| ||||| | |
|
|
T |
42459405 |
tcctttgtagcaattctattcagaaaaagacgtcaaacaaaaatgttaacctttaacggaacctccttaagccataagaattggttaaaatcttcagtga |
42459306 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
|||| ||||| |||| |||||| ||||| |
|
|
T |
42459305 |
tgttgttgtccaccgctgttaaataaga |
42459278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 53152193 - 53152132
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa |
229 |
Q |
|
|
|||| |||||||||| |||||| |||| ||||||| | ||| |||||||||||||| ||||| |
|
|
T |
53152193 |
agattatcctttgtagcaagtcgattctgaaagagcctccaaacaaaaatattaacttttaa |
53152132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 322
Target Start/End: Complemental strand, 26077828 - 26077680
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| | || |||||| |||| |||| |||| |||||| |||| | |
|
|
T |
26077828 |
tcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccataaaaattgatcaaaatctgcagtga |
26077729 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta |
322 |
Q |
|
|
||||| |||| |||| ||||||| ||||||| || || ||||| ||||| |
|
|
T |
26077728 |
tgttagtgtccaccgctgttaagaaagaataagctgaatgcaccgtgta |
26077680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 10801803 - 10801715
Alignment:
Q |
153 |
acatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||||| || |||| || ||| |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||| |
|
|
T |
10801803 |
acatttcttttacacaaattatcttttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt |
10801715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 31423333 - 31423195
Alignment:
Q |
184 |
caagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtc |
283 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||| |||| |||| |||| ||| || |||| ||||| | | |
|
|
T |
31423333 |
caagtctattcagaaagagacgtcagacaaaaatattaacctttaagggaaccgctttaagccataaaaattgattaaactctgcagtgatgttgaagcc |
31423234 |
T |
|
Q |
284 |
aaccgttgttaagtaagaatacgcagattgcactgtgta |
322 |
Q |
|
|
||||||||||| |||||||| || || ||||| ||||| |
|
|
T |
31423233 |
caccgttgttaaataagaataagctgaatgcaccgtgta |
31423195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 26390340 - 26390289
Alignment:
Q |
178 |
ttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa |
229 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
26390340 |
ttgtagcaagtctattcagaaagagacgccagacaaaaatgttaacctttaa |
26390289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 29532477 - 29532532
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa |
229 |
Q |
|
|
||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
T |
29532477 |
tcctttgtagcaagtctattcagaaagagacgccagacaaaaatgttaacatttaa |
29532532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 74418 - 74545
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
74418 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctgcagtga |
74517 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaaga |
301 |
Q |
|
|
||||| |||| |||| |||||||||||| |
|
|
T |
74518 |
tgttagtgtccaccgctgttaagtaaga |
74545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 58498 - 58368
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa |
273 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | ||| |||||| |||| |||| |||| ||| || |||| | |
|
|
T |
58498 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacctttaagggaaccgctttaagccataaaaattgattaaactctgcagtga |
58399 |
T |
|
Q |
274 |
tgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| |||| |||| |||||| |||||||| |
|
|
T |
58398 |
tgttgatgtccaccgctgttaaataagaata |
58368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 224828 - 224737
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatc |
265 |
Q |
|
|
||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||| ||| || ||| |||| |||| ||||||||||| |
|
|
T |
224828 |
tcctttgtagcaagtctattcagaaaaagacgccaaacaaaaatgttaacctttaacggaaccgccttaagccataaaaattgatgaaaatc |
224737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 11266145 - 11266218
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| | ||| |||||| |||| |
|
|
T |
11266145 |
tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatattaacttttaaaggaaccgctttaagcca |
11266218 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 27891818 - 27891891
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca |
247 |
Q |
|
|
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||| |||| |
|
|
T |
27891818 |
tcctttgttgcaagtctattcagaaagagatgccagacaaaaatattaacctttaatggaaccgctttaagcca |
27891891 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 29322916 - 29322980
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt |
241 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||| |
|
|
T |
29322916 |
tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt |
29322980 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 29150424 - 29150481
Alignment:
Q |
174 |
tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacg |
231 |
Q |
|
|
||||||||| ||||||||||||| || |||| ||| |||||||||||||||||||||| |
|
|
T |
29150424 |
tcctttgtagcaagtctattcaggaaaagacaccaaacaaaaatattaacctttaacg |
29150481 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 304
Target Start/End: Complemental strand, 5825077 - 5824941
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct |
267 |
Q |
|
|
|||| |||||||||| |||||| |||||||||||| | ||| |||||||||||||| ||||| | || |||||| |||| |||| |||| ||| || |
|
|
T |
5825077 |
agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatattaacttttaaagggaccgctttaagccataaaaattgatcaaactctg |
5824978 |
T |
|
Q |
268 |
cagtaatgttattgtcaaccgttgttaagtaagaata |
304 |
Q |
|
|
|||| | ||| | || |||||||||||||||||||| |
|
|
T |
5824977 |
cagtgagattagtatccaccgttgttaagtaagaata |
5824941 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 316
Target Start/End: Complemental strand, 31962775 - 31962632
Alignment:
Q |
173 |
atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagta |
272 |
Q |
|
|
|||||||||| |||||||||||||| ||||| |||| ||||| || ||||||||||||| ||| |||| |||| |||| ||| |||||| |||| |
|
|
T |
31962775 |
atcctttgtagcaagtctattcagatagagatgccaaacaaatatgttaacctttaacggaaccacttttagccataaaaattgagcaaaatcttcagag |
31962676 |
T |
|
Q |
273 |
atgttattgtcaaccgttgttaagtaagaatacgcagattgcac |
316 |
Q |
|
|
|||||| |||| || | ||||| |||||||| || |||||||| |
|
|
T |
31962675 |
atgttagtgtccactgccgttaaataagaataagctgattgcac |
31962632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 8896369 - 8896418
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt |
226 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||| || |||||||| |
|
|
T |
8896369 |
tttgtagcaagtctattcagaaagagacgccaaacaactatgttaacctt |
8896418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 38931892 - 38931941
Alignment:
Q |
177 |
tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt |
226 |
Q |
|
|
|||||| |||||||||||||||||||| |||| ||||| || |||||||| |
|
|
T |
38931892 |
tttgtagcaagtctattcagaaagagatgccaaacaaatatgttaacctt |
38931941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 6678684 - 6678632
Alignment:
Q |
168 |
agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatatt |
220 |
Q |
|
|
|||| |||||||||| |||||| |||||||||||| | ||| ||||||||||| |
|
|
T |
6678684 |
agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatatt |
6678632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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