View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1565_low_15 (Length: 321)
Name: NF1565_low_15
Description: NF1565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1565_low_15 |
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[»] scaffold0029 (2 HSPs) |
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[»] scaffold0394 (1 HSPs) |
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[»] scaffold0194 (2 HSPs) |
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[»] scaffold0031 (3 HSPs) |
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[»] scaffold0025 (1 HSPs) |
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[»] scaffold0295 (1 HSPs) |
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[»] scaffold0006 (1 HSPs) |
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[»] scaffold0005 (1 HSPs) |
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[»] scaffold0352 (1 HSPs) |
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[»] scaffold0220 (1 HSPs) |
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[»] scaffold0135 (6 HSPs) |
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[»] scaffold0054 (2 HSPs) |
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[»] scaffold0026 (1 HSPs) |
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[»] scaffold0017 (1 HSPs) |
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[»] scaffold0014 (1 HSPs) |
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[»] scaffold0012 (1 HSPs) |
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[»] scaffold0009 (1 HSPs) |
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[»] scaffold0002 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 37)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 14108829 - 14108940
Alignment:
Q |
7 |
ggaacagagatgagaataaagattttaggaatgattatgttgatgaagattaagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgttta |
106 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
14108829 |
ggaacaaagatgagaataaagattttaggaatgattatgttgatgaagattaagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgttta |
14108928 |
T |
|
Q |
107 |
caataaaatata |
118 |
Q |
|
|
|||||||||||| |
|
|
T |
14108929 |
caataaaatata |
14108940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 14418786 - 14418897
Alignment:
Q |
7 |
ggaacagagatgagaataaagattttaggaatgattatgttgatgaagattaagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgttta |
106 |
Q |
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|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
14418786 |
ggaacaaagatgagaataaagattttaggaatgattatgttgatgaagattaagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgttta |
14418885 |
T |
|
Q |
107 |
caataaaatata |
118 |
Q |
|
|
|||||||||||| |
|
|
T |
14418886 |
caataaaatata |
14418897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 45087067 - 45087183
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgttac |
220 |
Q |
|
|
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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|
T |
45087067 |
cttaattgttattttagtcctttaactaattttttggtatcggtttggtcccataactaaaaaaaggtccgttttggtattttaacttttgctccgttac |
45087166 |
T |
|
Q |
221 |
atgttttagtcctttcc |
237 |
Q |
|
|
||||||| ||| ||||| |
|
|
T |
45087167 |
atgttttggtcttttcc |
45087183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 45088310 - 45088192
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
T |
45088310 |
ggcttaattgctattttagtcccttaactaattgtttggtatcagtttggtcccataactaaaaaaaggtccgttttggtattttaacttttgctcagtt |
45088211 |
T |
|
Q |
219 |
acatgttttagtcctttcc |
237 |
Q |
|
|
|| |||||| ||||||||| |
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|
T |
45088210 |
acttgttttggtcctttcc |
45088192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 45596866 - 45596988
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaa-ttttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctc |
214 |
Q |
|
|
||||||||||||||||||||| |||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||||||| ||| ||| |
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|
T |
45596866 |
ataggcttaattgctattttaatcccttaactaatttttttggtatcggtttgataacataactaaaaaaaagtccgttttggtattttaagtttatctc |
45596965 |
T |
|
Q |
215 |
cgttacatgttttagtcctttcc |
237 |
Q |
|
|
| ||||||||||| ||||||||| |
|
|
T |
45596966 |
cattacatgttttggtcctttcc |
45596988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 21709149 - 21709215
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
T |
21709149 |
taaaatttaggcttaattgctattttcgtcccttaactaattttttagtatcgctttggtcccataa |
21709215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 40930740 - 40930653
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagat-taagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| ||||| ||||||||| |
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|
T |
40930740 |
ttttaggaatgattatgttgatgaagataggagaagaagatgaagaaaggtgagaaaaata-taagtgttggtggtttataataaaata |
40930653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 26024888 - 26024944
Alignment:
Q |
120 |
gcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
26024888 |
gcttaattgctatcttcgtcccttaacttattttttggtatcgctttggtcccataa |
26024944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 21710661 - 21710602
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||| ||||| |||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
21710661 |
taggctgaattgatatttttgtcccttaacttattttttggtatcgctttggtcccataa |
21710602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 38406350 - 38406266
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
|||||||||| ||||||| |||||||| ||||||| |||||||||||||| ||||||||| |||| | | ||||||||||||||| |
|
|
T |
38406350 |
ttttaggaataattatgtccatgaagatgaagaaga---tgaagaaaggtgaggaaaatatttggtgtggatggtttacaataaaata |
38406266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 4167825 - 4167785
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaaaatg |
69 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
4167825 |
ttttaggaatgattatgttgatgaagatgaagaagaaaatg |
4167785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 19070015 - 19069951
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||| || |||| ||||||||||| |||||||||| || ||||||||| ||||| |
|
|
T |
19070015 |
atataggcttaattacttttttggtcccttaacttattttttggtttcattttggtcccttaact |
19069951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 36701357 - 36701417
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
36701357 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
36701417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 40852227 - 40852159
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
40852227 |
taaaataaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
40852159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 23350915 - 23350974
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || ||||||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
23350915 |
ggcttaattactcatttagtcccttaacttattttttggtttcgttttggtcccttaact |
23350974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 24733625 - 24733688
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
24733625 |
tataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
24733688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 4167746 - 4167700
Alignment:
Q |
70 |
aagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
||||||||||||||||||||| |||| ||| ||||||||||||||| |
|
|
T |
4167746 |
aagaaaggtgagaaaaatattaggtgtcggtggtttacaataaaata |
4167700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 19543481 - 19543543
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||| ||||||||||||||| |||||||||||| || ||| |||||| |||| |||| |
|
|
T |
19543481 |
taaaatataaacttaattgctattttcgtcccttaactatttatttagtatcgctttgatccc |
19543543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 39143572 - 39143510
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
39143572 |
ataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
39143510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 48095423 - 48095361
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
48095423 |
ataggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact |
48095361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 3217814 - 3217753
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
3217814 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
3217753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 7777017 - 7776956
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
7777017 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
7776956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 8736184 - 8736123
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||||| |
|
|
T |
8736184 |
taggcttaattactcttttggtcccttaatttattttttggtgtcgttttggtcccttaact |
8736123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 10986695 - 10986752
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||| || |||| |||||||||||| ||||||||||||| |||| ||| |||| |
|
|
T |
10986695 |
ggcttaatttctcttttcgtcccttaactatttttttggtatcgttttgctcctataa |
10986752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 13965038 - 13965099
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
13965038 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
13965099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 26025924 - 26025883
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtat |
160 |
Q |
|
|
||||||||||||||||| |||| ||||||||||| ||||||| |
|
|
T |
26025924 |
ggcttaattgctatttttgtcctttaactaatttcttggtat |
26025883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 27284240 - 27284301
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
27284240 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
27284301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 39383805 - 39383858
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
39383805 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtccc |
39383858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 40738193 - 40738246
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||||||||| |||||| |||||||| || |||||| ||||||||| |
|
|
T |
40738193 |
ggcttaattgctattttcgtccctcaactaattaattagtatcgctttggtccc |
40738246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 45057539 - 45057600
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||| |||| ||||| |
|
|
T |
45057539 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttgatcccttaact |
45057600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 47987325 - 47987386
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
47987325 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
47987386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 19105666 - 19105598
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| ||||||||||||| || |||| ||||||||||| |||||||| | || ||||||||| ||||| |
|
|
T |
19105666 |
taaattataggcttaattactcttttggtcccttaacttattttttgatttcattttggtcccttaact |
19105598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 20493744 - 20493804
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
20493744 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
20493804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 31852141 - 31852081
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31852141 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
31852081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 36701799 - 36701739
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
36701799 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
36701739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 37374516 - 37374456
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
37374516 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
37374456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 45456733 - 45456793
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
45456733 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
45456793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 71887 - 71769
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
T |
71887 |
ggcttaattgctattttagtcccttaactaattttttggtatcgctttggtcccataactaaaaaaaggtccgttgtggtattttaacttttgctccgtt |
71788 |
T |
|
Q |
219 |
acatgttttagtcctttcc |
237 |
Q |
|
|
||||||||| ||||||||| |
|
|
T |
71787 |
acatgttttggtcctttcc |
71769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 70668 - 70788
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact-nnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |
|
|
T |
70668 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactaaaaaaaaagtccattttggtattttaacttttactccg |
70767 |
T |
|
Q |
217 |
ttacatgttttagtcctttcc |
237 |
Q |
|
|
||||||||||| ||||||||| |
|
|
T |
70768 |
ttacatgttttggtcctttcc |
70788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0394 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0394
Description:
Target: scaffold0394; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 14268 - 14384
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaa-ttttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctcc |
215 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
T |
14268 |
taggcttaattgctattttagtcccttaactaatttttttggtatcggtttggtcccataactaaaaaaaagtccgttttggtattttaacttttgttcc |
14367 |
T |
|
Q |
216 |
gttacatgttttagtcc |
232 |
Q |
|
|
||||||||||||||||| |
|
|
T |
14368 |
gttacatgttttagtcc |
14384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 27688483 - 27688599
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctcc |
215 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
T |
27688483 |
ataggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactaaaaaaaagtccgttttggtattttaacttttgttcc |
27688582 |
T |
|
Q |
216 |
gttacatgttttagtcc |
232 |
Q |
|
|
|||||||||||| |||| |
|
|
T |
27688583 |
gttacatgttttggtcc |
27688599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 27695635 - 27695520
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
T |
27695635 |
taggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactgaaaaaaagtccgttttggtattttaacttttgttccg |
27695536 |
T |
|
Q |
217 |
ttacatgttttagtcc |
232 |
Q |
|
|
||||||||||| |||| |
|
|
T |
27695535 |
ttacatgttttggtcc |
27695520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 20184446 - 20184538
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttt |
209 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
20184446 |
taggcttaattgttattttagtcccttaactaattttttggtatcggtttggtcccataactaaaaataaatccgttttggtattttaacttt |
20184538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 20185872 - 20185758
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgt |
217 |
Q |
|
|
||||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||| ||||| |
|
|
T |
20185872 |
aggcttaattgctattttagtccattacctaatttttttgtatcggtttgatcccataactaaaaaaaagtttgttttggtattttaacttttgttccgt |
20185773 |
T |
|
Q |
218 |
tacatgttttagtcc |
232 |
Q |
|
|
|||||||||| |||| |
|
|
T |
20185772 |
tacatgttttggtcc |
20185758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 39991507 - 39991620
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgttac |
220 |
Q |
|
|
|||||||| ||||||||| ||||||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||| | || |
|
|
T |
39991507 |
cttaattgttattttagttccttaactaattttttgatatcgttttgatcccataactaaaaaaaa-tccgttttggtattttaacttttgctccatcac |
39991605 |
T |
|
Q |
221 |
atgttttagtccttt |
235 |
Q |
|
|
||||||||||||||| |
|
|
T |
39991606 |
atgttttagtccttt |
39991620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 39992561 - 39992495
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
T |
39992561 |
taaaatataggcttaattactattttagtcccttaactaattttttggtatcacttttgtcccataa |
39992495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 21815897 - 21815965
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||| |||| |||||||||||||||| ||||||||||||||||||| |||||| |||||| |||||| |
|
|
T |
21815897 |
aataaattataagcttaattgctattttcgtcccttaactaattttttagtatcgctttggttccataa |
21815965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 49221505 - 49221566
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| ||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||| |
|
|
T |
49221505 |
taggtttaattgttatttttgtcccttaactaattttttggtatcgggttagtcccataact |
49221566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 21817457 - 21817401
Alignment:
Q |
120 |
gcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
21817457 |
gcttaattactattttcatcccttaactaattttttggtatcgctttggtcccataa |
21817401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 45940746 - 45940679
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||| ||||||||| ||||||||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
45940746 |
aaaatttaggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaact |
45940679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 12061622 - 12061683
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
12061622 |
taggcttaattactcttttggtcccttaacttattttttggtgtcgttttggtcccttaact |
12061683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 18024977 - 18024916
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| ||| ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
18024977 |
taggcttaattactaatttggtcccttaacttattttttggtttcgttttggtcccttaact |
18024916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 12739959 - 12740023
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
12739959 |
atataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
12740023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 32304229 - 32304285
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||||||| |||| ||||||||| | ||| |||||||||| ||||||||| |
|
|
T |
32304229 |
ataggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtccc |
32304285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 13355165 - 13355228
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||| |||||||||| || | ||||||||||||||||| || ||||||||| ||||||||| |
|
|
T |
13355165 |
ataaaaaataggcttaaatgttcttttagtcccttaactatttaattggtatcgctttggtccc |
13355228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 14859193 - 14859134
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||| |||||||| || |||||| |||||| |||||| |||||| |
|
|
T |
14859193 |
taggcttaattgctattttcttcccttaaatatttttttagtatcgctttggttccataa |
14859134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 22976973 - 22977032
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtc |
170 |
Q |
|
|
||||||||||||||||| || |||| |||| |||||| |||||||||| ||| ||||||| |
|
|
T |
22976973 |
aaaatataggcttaattacttttttggtcctttaacttattttttggtttcgttttggtc |
22977032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 38771676 - 38771617
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
38771676 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
38771617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 40503790 - 40503731
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
40503790 |
ggcttaattgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
40503731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 17934151 - 17934081
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| ||||||||| || ||||||||||||||| |||||||||| | | ||||||||| ||||| |
|
|
T |
17934151 |
aataaaataatggcttaattactcatttagtcccttaacttattttttggttttgttttggtcccttaact |
17934081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 966975 - 967032
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcc |
171 |
Q |
|
|
|||||||||||| |||| |||| |||||||||||| || ||||||||| |||||||| |
|
|
T |
966975 |
atataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcc |
967032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 5348881 - 5348837
Alignment:
Q |
192 |
ttttggtattttaacttttgctccgttacatgttttagtcctttcc |
237 |
Q |
|
|
||||||||||||||||||| ||||||||||| |||| ||||||||| |
|
|
T |
5348881 |
ttttggtattttaactttt-ctccgttacatattttggtcctttcc |
5348837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 13302018 - 13301961
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||| |||| |||| ||||||||| || || |||||||||| ||||||||| |
|
|
T |
13302018 |
tataggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc |
13301961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 13312674 - 13312617
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||| |||| |||| ||||||||| || || |||||||||| ||||||||| |
|
|
T |
13312674 |
tataggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc |
13312617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 19794837 - 19794780
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
19794837 |
tataggcttaataactcttttggtcccttaacttattttttggtttcgttttggtccc |
19794780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 24243057 - 24242996
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
24243057 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
24242996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 28004264 - 28004325
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
28004264 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
28004325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 43464812 - 43464869
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||| |||| |||| ||||||||| || || |||||||||| ||||||||||||| |
|
|
T |
43464812 |
ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccataa |
43464869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 51891360 - 51891299
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
51891360 |
taggtttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
51891299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 8327806 - 8327766
Alignment:
Q |
138 |
tcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||||||||||||||||||| ||||| |
|
|
T |
8327806 |
tcccttaactatttatttggtatcggtttggtcccttaact |
8327766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 31049133 - 31049077
Alignment:
Q |
122 |
ttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31049133 |
ttaaatgcttttttagtcccttaactatttaattggtatcgctttggtcccttaact |
31049077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 29751199 - 29751085
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgt |
217 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
T |
29751199 |
aggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactaaaaaaaagtccgttttggtattttaacttttgttccgt |
29751100 |
T |
|
Q |
218 |
tacatgttttagtcc |
232 |
Q |
|
|
|||||||||| |||| |
|
|
T |
29751099 |
tacatgttttggtcc |
29751085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 29744781 - 29744894
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
T |
29744781 |
ggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactaaaaaaaagtccgttttggtattttaacttttgttccgtt |
29744880 |
T |
|
Q |
219 |
acatgttttagtcc |
232 |
Q |
|
|
||||||||| |||| |
|
|
T |
29744881 |
acatgttttggtcc |
29744894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 14403686 - 14403796
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| |
|
|
T |
14403686 |
taggcttaattgctattttagtcccttacctaatttgttggtatcactttggtcccataactaaaatttggtccattttggtattttaacttttgcgccg |
14403785 |
T |
|
Q |
217 |
ttacatgtttt |
227 |
Q |
|
|
||||||||||| |
|
|
T |
14403786 |
ttacatgtttt |
14403796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 21611913 - 21611972
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
21611913 |
taggcttaattgctattttcgtcccttaactaattttttggtatcgatttggtcccataa |
21611972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 33801796 - 33801882
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagatta-agaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaa |
114 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| ||||| ||||||| |
|
|
T |
33801796 |
ttttaggaatgattatgttgatgaagataggagaagaagatgaagaaaggtgaaaaaaatatcaagtgttggtggtttataataaaa |
33801882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 21282816 - 21282874
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||||||| |
|
|
T |
21282816 |
aggcttaattgctattttcgtcccttaattaatttttttgtatcgctttggtcccataa |
21282874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 5660249 - 5660192
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| |||||| ||||||||||||||||||| ||||||| ||||| |
|
|
T |
5660249 |
ggcttaattgctattttcgtccctaaactaattttttggtatcgttttggtctcataa |
5660192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 5659106 - 5659162
Alignment:
Q |
121 |
cttaattgctatttta-gtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
5659106 |
cttaattgctatttttcgtcccttaactaattttttggtatcactttggtcccataa |
5659162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 21283965 - 21283922
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggt |
158 |
Q |
|
|
|||||||||||||| |||||| |||||||||||||||||||||| |
|
|
T |
21283965 |
tataggcttaattgttattttcgtcccttaactaattttttggt |
21283922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 21612933 - 21612882
Alignment:
Q |
125 |
attgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||| |||||| ||||||||| |||||||||||||||| ||||||||||||| |
|
|
T |
21612933 |
attgttattttcgtcccttaattaattttttggtatcgttttggtcccataa |
21612882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 8938883 - 8938945
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
8938883 |
ataggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
8938945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 19048233 - 19048303
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||||||||| || |||| ||||||||||| |||||||||| || ||||||||| ||||| |
|
|
T |
19048233 |
aataaaataaaggcttaattacttttttggtcccttaacttattttttggtttcattttggtcccttaact |
19048303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 8286754 - 8286689
Alignment:
Q |
113 |
aatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||||| || |||| | ||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
8286754 |
aatataggcttaattacttttttgggcccttaacttattttttggtttcgttttggtcccttaact |
8286689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 3618781 - 3618840
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
3618781 |
ggcttaaatgcttttttagtcccttaactatttaattggtatcgctttggtcccttaact |
3618840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 5645932 - 5645865
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||| |||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
5645932 |
aaaataaaggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
5645865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 8286307 - 8286370
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||| || |||| ||| ||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
8286307 |
tataggcttaattactcttttggtctcttaacttattttttggtttcgttttggtcccttaact |
8286370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 12260444 - 12260499
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||||||||||| |||| ||||||||| | ||| |||||||||| ||||||||| |
|
|
T |
12260444 |
taggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtccc |
12260499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 18700401 - 18700460
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
18700401 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
18700460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 26841664 - 26841605
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
26841664 |
ggcttaattactctttttgtcccttaacttattttttggtttcgttttggtcccttaact |
26841605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 5645546 - 5645599
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
5645546 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtccc |
5645599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 6888781 - 6888842
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||||| |
|
|
T |
6888781 |
taggcttaattactcttttggtcccttaatttattttttggtttcgttttggtcccttaact |
6888842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 21272183 - 21272118
Alignment:
Q |
113 |
aatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||| ||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
21272183 |
aatattggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
21272118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 26392905 - 26392844
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
26392905 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
26392844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 29465754 - 29465787
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaatt |
151 |
Q |
|
|
|||||||||||||||||| ||||||||||||||| |
|
|
T |
29465754 |
aggcttaattgctattttcgtcccttaactaatt |
29465787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 31038321 - 31038374
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
31038321 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtccc |
31038374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 32223834 - 32223903
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| ||| |||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
32223834 |
ataaaataaaggtttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
32223903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 3366493 - 3366557
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| ||||||||| ||| ||||| || || ||||||||| ||||||||| ||||| |
|
|
T |
3366493 |
atataggcttaaatgctattttggtctcttaattatttaattggtatcgctttggtcccttaact |
3366557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 12261553 - 12261489
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| ||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
12261553 |
atataggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaact |
12261489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 13703376 - 13703440
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||| |||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
13703376 |
atataagcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact |
13703440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 17383734 - 17383794
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
17383734 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
17383794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 18693691 - 18693635
Alignment:
Q |
122 |
ttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
18693691 |
ttaattacttttttggtcccttaacttattttttggtttcgttttggtcccttaact |
18693635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 29467343 - 29467291
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcc |
171 |
Q |
|
|
||||||||||||||||| |||||||||||| || ||| |||| | |||||||| |
|
|
T |
29467343 |
ggcttaattgctattttcgtcccttaactatttatttagtattgctttggtcc |
29467291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 30859919 - 30859979
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
30859919 |
aggcttaattactcatttggtcccttaacttattttttggtttcgttttggtcccttaact |
30859979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 31038821 - 31038761
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||||||||||||||| | |||||||| ||| |||||| || ||||| |
|
|
T |
31038821 |
aggcttaattactcttttagtcccttaacttaatttttggtttcgttttggttccttaact |
31038761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 31739974 - 31739914
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31739974 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
31739914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 45)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 51646031 - 51645912
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |
|
|
T |
51646031 |
taggcttaattgctattttagtcccttagctaattttttggtatcggtttggtcccataactaaaaaaa-gtccgttttggtattttaagtttatctccg |
51645933 |
T |
|
Q |
217 |
ttacatgttttagtcctttcc |
237 |
Q |
|
|
||||||||||| ||||||||| |
|
|
T |
51645932 |
ttacatgttttggtcctttcc |
51645912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 11038572 - 11038695
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgct |
213 |
Q |
|
|
|||| |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||| | |
|
|
T |
11038572 |
atattggcttaattgctattttagtcccttagctaattttttggtattgctttggtcccataactaaaaaaaagtctgttttggtattttaacttttgtt |
11038671 |
T |
|
Q |
214 |
ccgttacatgttttagtcctttcc |
237 |
Q |
|
|
| ||| | |||||| ||||||||| |
|
|
T |
11038672 |
ctgtttcttgttttggtcctttcc |
11038695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 36220663 - 36220599
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
36220663 |
atataggcttaattgctattttagtaccttaactaattttttggtatcgttttggtcccataact |
36220599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 36219402 - 36219524
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgct |
213 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||| || |
|
|
T |
36219402 |
atatatgcttaattgctattttagtcccttaactaatttttgagtatcggtttggtcccataactaaaaaaa-gtccgttttagtattttaagtttatct |
36219500 |
T |
|
Q |
214 |
ccgttacatgttttagtcctttcc |
237 |
Q |
|
|
||||||||| |||| ||| ||||| |
|
|
T |
36219501 |
ccgttacatattttggtcatttcc |
36219524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 52980319 - 52980233
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
|||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
T |
52980319 |
ttttaggaatgattatgttgatgaagatgaaaaagaataa-aagaaaggtgagaaaaatattaggtgttggtggtttacaataaaata |
52980233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 756486 - 756544
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
756486 |
aggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataa |
756544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 11039788 - 11039672
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||| |||| || |||||| |||| |||||||||||||||||||||||||| |
|
|
T |
11039788 |
ggcttaattgctattttagtcatttaactaattttttggtatcactttgatc--ataactaaaaaaaagtccattttggtattttaacttttgctccgtc |
11039691 |
T |
|
Q |
219 |
acatgttttagtcctttcc |
237 |
Q |
|
|
||||||||||||| ||||| |
|
|
T |
11039690 |
acatgttttagtcatttcc |
11039672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 702708 - 702651
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
702708 |
ggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataa |
702651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 771007 - 770950
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
771007 |
ggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataa |
770950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 35060511 - 35060454
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
35060511 |
ggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataa |
35060454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 16038273 - 16038332
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
16038273 |
taggcttaattgttattttcgtcccttaactaattttttggtatcgctttggtcccataa |
16038332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 35055332 - 35055390
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
35055332 |
aggcttaattgttattttcgtcccttaactaattttttggtatcgctttggtcccataa |
35055390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 701633 - 701690
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
701633 |
ggcttaattgctattttcgtcccttaacttattttttggtatcgctttggtcccataa |
701690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 769932 - 769989
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
769932 |
ggcttaattgctattttcgtcccttaacttattttttggtatcgctttggtcccataa |
769989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 757559 - 757500
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
757559 |
taggcttaattgctattttcatcccttaacttattttttggtatcgctttggtcccataa |
757500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 16039734 - 16039679
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||| || |||||||||| |
|
|
T |
16039734 |
cttaattgctatttttgtcccttaactaattttttggtatcgtttcggtcccataa |
16039679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 11094830 - 11094773
Alignment:
Q |
59 |
agaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
T |
11094830 |
agaagaagatgaagaaaggtgagaaaaatattaggtgttggtggtttacaataaaata |
11094773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 50551468 - 50551386
Alignment:
Q |
123 |
taattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaa |
205 |
Q |
|
|
|||||| |||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||| |
|
|
T |
50551468 |
taattgttattttagtcccttaattaattttttggtatcggtttagttccataactaaaaaaaagtccgttttggtattttaa |
50551386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 39592069 - 39592159
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaaa-atgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaatata |
118 |
Q |
|
|
||||||||||||||||| |||||||| || | | || | |||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
T |
39592069 |
ttttaggaatgattatgaagatgaagaagaatagggaagaagaagaaaggtgagaaaaatattaggtgttggtggtttacaataaaatata |
39592159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 52766142 - 52766212
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
52766142 |
aataaaatataggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
52766212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 36611041 - 36611101
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||||||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
36611041 |
aggcttaattactcttttagtcccttaacttattttttggtttcgttttggtcccttaact |
36611101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 41845493 - 41845560
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||||||||| |||| |||| ||||||||||||||| ||||||||| ||||||||| ||||| |
|
|
T |
41845493 |
aaaaaataggcttaaatgctcttttggtcccttaactaattaattggtatcgctttggtcccttaact |
41845560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 19630762 - 19630822
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
19630762 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
19630822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 25764361 - 25764421
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
25764361 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
25764421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 31208553 - 31208493
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
31208553 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
31208493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 34238005 - 34237946
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| ||||||||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
34238005 |
ggcttaaatgctattttggtcccttaactatttaattggtatcgttttggtcccttaact |
34237946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 40681561 - 40681506
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||||||||||| |||| ||||||||| | ||| |||||||||| ||||||||| |
|
|
T |
40681561 |
taggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtccc |
40681506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 2735669 - 2735607
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcc |
171 |
Q |
|
|
||||| ||||||||||| |||| |||| ||||||||| || || |||||||||| |||||||| |
|
|
T |
2735669 |
ataaattataggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcc |
2735607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 20614677 - 20614615
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
20614677 |
ataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
20614615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 31487967 - 31488037
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| | ||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31487967 |
aataaaatttgggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
31488037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 52766286 - 52766332
Alignment:
Q |
132 |
ttttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
52766286 |
ttttagtcccttaacttattttttggtttcgttttggtcccttaact |
52766332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 55014095 - 55014033
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| || ||||||||| |||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
55014095 |
ataggcttaattactcttttagtccattaacttattttttggtttcgttttggtaccttaact |
55014033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 56271285 - 56271215
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| ||| ||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
56271285 |
aatataatctaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
56271215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 9203619 - 9203558
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
9203619 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
9203558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 9207838 - 9207777
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
9207838 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
9207777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 11649503 - 11649564
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattt-tttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| ||||||||||||||||||||| ||||||||| ||||| ||| ||||| |
|
|
T |
11649503 |
aggcttaaatgctcttttagtcccttaactaatttaattggtatcgctttggacccttaact |
11649564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 32617657 - 32617596
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
32617657 |
taggcttaattactcatttggtcccttaacttattttttggtttcgttttggtcccttaact |
32617596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 42369569 - 42369508
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
42369569 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
42369508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 51644805 - 51644854
Alignment:
Q |
188 |
tccgttttggtattttaacttttgctccgttacatgttttagtcctttcc |
237 |
Q |
|
|
|||||||||||||||||| ||| || ||||||||||||| ||||||||| |
|
|
T |
51644805 |
tccgttttggtattttaagtttatcttcgttacatgttttggtcctttcc |
51644854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 1098052 - 1098112
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
1098052 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
1098112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 17475942 - 17475882
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
17475942 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
17475882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 25618435 - 25618495
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
25618435 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
25618495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 27509632 - 27509692
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
27509632 |
aggcttaattactcatttggtcccttaacttattttttggtttcgttttggtcccttaact |
27509692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 39899550 - 39899502
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggt |
158 |
Q |
|
|
||||| |||||||||||| || |||| ||||||||||| |||||||||| |
|
|
T |
39899550 |
taaaaaataggcttaattactcttttggtcccttaacttattttttggt |
39899502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 41610126 - 41610186
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
41610126 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
41610186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 40)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 46015915 - 46015797
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
|||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
T |
46015915 |
ggcttaattgttattttagtcccttaagtaattttttggtatcgctttggtcccataactaaaaaaaagtccgttttggtattttaacttttgttccgtt |
46015816 |
T |
|
Q |
219 |
acatgttttagtcctttcc |
237 |
Q |
|
|
| |||||||||||||||| |
|
|
T |
46015815 |
tcttgttttagtcctttcc |
46015797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 33332175 - 33332295
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
T |
33332175 |
taggcttaattgctattttagtctcttaactagttgtttggtatcggtttggtcccataactaaaaaaatgtccgttttgatattttaacttttgctccg |
33332274 |
T |
|
Q |
217 |
ttacatgttttagtcctttcc |
237 |
Q |
|
|
|||| |||||| ||| ||||| |
|
|
T |
33332275 |
ttacttgttttggtcatttcc |
33332295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 33333467 - 33333352
Alignment:
Q |
122 |
ttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgttaca |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||| |
|
|
T |
33333467 |
ttaattgctattttagtcccttaactaattttttggtatcagtttggtcccataattaaaaaaatgtccgttttggtattttaatttttgctccgttaca |
33333368 |
T |
|
Q |
222 |
tgttttagtcctttcc |
237 |
Q |
|
|
| |||| ||| ||||| |
|
|
T |
33333367 |
tcttttggtcatttcc |
33333352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 46014694 - 46014819
Alignment:
Q |
112 |
aaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttg |
211 |
Q |
|
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||| || | |||||||||| ||| ||||||||||||||||||||| |
|
|
T |
46014694 |
aaatgtaggcttaattgctattttagtcatttaactaattttttggtatcgcttcgatcccataactaaaaaaaagtctgttttggtattttaacttttg |
46014793 |
T |
|
Q |
212 |
ctccgttacatgttttagtcctttcc |
237 |
Q |
|
|
||| || ||||||||||||||||||| |
|
|
T |
46014794 |
ctctgtcacatgttttagtcctttcc |
46014819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 2939833 - 2939730
Alignment:
Q |
134 |
ttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgttacatgttttagtcct |
233 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| |||||| ||| | |
|
|
T |
2939833 |
ttagtcccttaactaatattttggtatcggtttggtcctataactaaaaaaatgtctgttttggtattttaacttttgctccgttacttgttttggtcat |
2939734 |
T |
|
Q |
234 |
ttcc |
237 |
Q |
|
|
|||| |
|
|
T |
2939733 |
ttcc |
2939730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 51597961 - 51598018
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
51597961 |
ggcttaattgctattttcgtcccttaacttattttttggtatcgctttggtcccataa |
51598018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 16962009 - 16962067
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||| |
|
|
T |
16962009 |
aggcttaattgctatttttgtcccttaactaattttttggtattgctttggtcctataa |
16962067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 50682654 - 50682588
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||| ||| |||||||||||||||| ||||||||| || ||||||||||||| ||||||||||||| |
|
|
T |
50682654 |
taaaaaataagcttaattgctattttggtcccttaattatttttttggtatcgctttggtcccataa |
50682588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 51599491 - 51599434
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||| |
|
|
T |
51599491 |
ggcttaattgctattttcgtcccttaactaattttttggtatcgctttgatcctataa |
51599434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 16963484 - 16963427
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||| |||||| || ||||||||||||||||||||||| ||||||| ||||| |
|
|
T |
16963484 |
ggcttaattgttattttcgttccttaactaattttttggtatcgatttggtctcataa |
16963427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 2938567 - 2938670
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
|||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||| |||||| ||| |||||||| |||||||||||| |
|
|
T |
2938567 |
ggcttaattgctattt-agtcccttaactaa-tttttggtatcagtttgg--ccataactaaaaaaaggtccg-tttaatattttaatttttgctccgtt |
2938661 |
T |
|
Q |
219 |
acatgtttt |
227 |
Q |
|
|
||||||||| |
|
|
T |
2938662 |
acatgtttt |
2938670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 7964111 - 7964172
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || |||||||||| ||||||||| ||||| |
|
|
T |
7964111 |
taggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaact |
7964172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 6327936 - 6328000
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||||||| ||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
6327936 |
atataggcttaattgctctttaggtcccttaactatttaattggtatcgctttggtcccttaact |
6328000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 6328393 - 6328329
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||||||| |||| ||||||||| || || ||||||||| ||||||||| ||||| |
|
|
T |
6328393 |
atataggcttaattgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact |
6328329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 34023637 - 34023573
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||| |||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
34023637 |
atataggtttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact |
34023573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 36143196 - 36143140
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||||||| |||| ||||||||| | ||| |||||||||| ||||||||| |
|
|
T |
36143196 |
ataggcttaattgctcttttcgtcccttaagttattatttggtatcgatttggtccc |
36143140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 46448800 - 46448740
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
46448800 |
aggcttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact |
46448740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 52742743 - 52742779
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaa |
65 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| |
|
|
T |
52742743 |
ttttaggaatgattatgttgatgaagatgaagaagaa |
52742779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 7965568 - 7965509
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||| |||| |||||||||||| || |||||||||| ||||||||| ||||| |
|
|
T |
7965568 |
ggcttaaatgctcttttggtcccttaactatttatttggtatcgttttggtcccttaact |
7965509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 10579733 - 10579674
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
10579733 |
ggcttaattactcttttggtcccttaacttattttttggtttcgatttggtcccttaact |
10579674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 11652876 - 11652935
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
11652876 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
11652935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 24326582 - 24326641
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||| |||| |||||||||||| || |||||||||| ||||||||| ||||| |
|
|
T |
24326582 |
ggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaact |
24326641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 39203016 - 39202965
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtc |
170 |
Q |
|
|
|||||||||| ||||||||||| |||| |||||| ||||||||| ||||||| |
|
|
T |
39203016 |
ggcttaattgttattttagtcctttaattaatttgttggtatcgatttggtc |
39202965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 44114584 - 44114517
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
44114584 |
aaaaaataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
44114517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 37483043 - 37483113
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| | |||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
37483043 |
aataaaaaaaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
37483113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 3798770 - 3798709
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
3798770 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
3798709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 6714765 - 6714708
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| |
|
|
T |
6714765 |
tataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtccc |
6714708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 7334988 - 7334927
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
7334988 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact |
7334927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 31488023 - 31488084
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31488023 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
31488084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 37483603 - 37483542
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
37483603 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
37483542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 38980114 - 38980053
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
38980114 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
38980053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 48222557 - 48222496
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggt |
169 |
Q |
|
|
||||||||||||||| || |||| |||| |||||||||||| ||||| ||||||| ||||| |
|
|
T |
48222557 |
aataaaatataggctaaagtgctcttttggtcccttaactatatttttagtatcggattggt |
48222496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 52742786 - 52742843
Alignment:
Q |
59 |
agaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
||||||| |||||||||||||||||||||||| |||| || ||||||| ||||||| |
|
|
T |
52742786 |
agaagaagatgaagaaaggtgagaaaaatattaggtgtcagtggtttacagtaaaata |
52742843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 3798323 - 3798383
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
3798323 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
3798383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 14244619 - 14244559
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
14244619 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
14244559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 17738725 - 17738665
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
17738725 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
17738665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 24370114 - 24370174
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
24370114 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
24370174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 45678711 - 45678771
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
45678711 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
45678771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 48225453 - 48225393
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
48225453 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
48225393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 50227973 - 50227913
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
50227973 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
50227913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 53)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 9311019 - 9311139
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||| |
|
|
T |
9311019 |
taggcttaattgctattttagtcccttatctaattttttggtatcgctttggtcccataactaaaaaaaagtctgttttggtattttaacttttgttccg |
9311118 |
T |
|
Q |
217 |
ttacatgttttagtcctttcc |
237 |
Q |
|
|
|| | |||||| ||||||||| |
|
|
T |
9311119 |
tttcttgttttggtcctttcc |
9311139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 9312245 - 9312117
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaact |
207 |
Q |
|
|
||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| | |
|
|
T |
9312245 |
aataaaaagtaggtttaattgctattttagtcctttaactaattttttggtatcgctttgatcccataactaaaaaaaagtccgttttggtattttaatt |
9312146 |
T |
|
Q |
208 |
tttgctccgttacatgttttagtcctttc |
236 |
Q |
|
|
||||||| || |||||||||||||||||| |
|
|
T |
9312145 |
tttgctctgtcacatgttttagtcctttc |
9312117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 14816570 - 14816687
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||| |
|
|
T |
14816570 |
ggcttaattgctattttagtcccttaactaattttttggtatcgctttggtcccattactaaaaaaa-gtctgttttggtattttaacttttgttccgtt |
14816668 |
T |
|
Q |
219 |
acatgttttagtcctttcc |
237 |
Q |
|
|
| |||||| || |||||| |
|
|
T |
14816669 |
tcttgttttggttctttcc |
14816687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 14829170 - 14829053
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtt |
218 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||| |
|
|
T |
14829170 |
ggcttaattgctattttagtcccttaactaattttttggtatcgctttggtcccattactaaaaaaa-gtctgttttggtattttaacttttgttccgtt |
14829072 |
T |
|
Q |
219 |
acatgttttagtcctttcc |
237 |
Q |
|
|
| |||||| || |||||| |
|
|
T |
14829071 |
tcttgttttggttctttcc |
14829053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 39567061 - 39567120
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
39567061 |
taggcttaattgttattttcgtcccttaactaattttttggtatcgctttggtcccataa |
39567120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 39270853 - 39270795
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
T |
39270853 |
aggcttaattgctattttcgtcccttaacttattttttggtatcgttttggtcccataa |
39270795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 45378605 - 45378549
Alignment:
Q |
120 |
gcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |
|
|
T |
45378605 |
gcttaattgctattttcgtcccttaaataattttttggtatcgctttggtcccataa |
45378549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 44633830 - 44633775
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| |
|
|
T |
44633830 |
cttaattgctattttggttccttaactaattttttggtatcgctttggtcccataa |
44633775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 14819430 - 14819391
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttg |
156 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
T |
14819430 |
taggcttaattgctattttagtcccttaactaattttttg |
14819391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 39568564 - 39568509
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||||| |||||| |||||| |
|
|
T |
39568564 |
cttaattgctatttttgtcccttaactaattttttagtatcgttttggttccataa |
39568509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 44632698 - 44632760
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccca |
173 |
Q |
|
|
|||| ||||| |||||||||||||| ||| ||||| |||||||||||||||| |||||||||| |
|
|
T |
44632698 |
aaaaaataggtttaattgctattttcgtctcttaattaattttttggtatcgttttggtccca |
44632760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 29802150 - 29802219
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| ||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
29802150 |
ataaaatttaggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
29802219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 7486408 - 7486326
Alignment:
Q |
35 |
gaatgattatgttgatgaagatta--agaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
|||| ||| |||| |||||||||| ||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||| |
|
|
T |
7486408 |
gaatcattgtgtttatgaagattaggagaagaagatgaagaa-ggtgagaaaaatattaggtgttggtggtttacaataaaata |
7486326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 41522488 - 41522588
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaaaatg-------------aagaaaggtgagaaaaatatttagtgttggttgtttacaataaaat |
115 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
T |
41522488 |
ttttaggaatgattatgttgatgaagatgaagaagaagatgggagaagatgataaagaaaggtgagaaaaatattaggtgttggtggtttacaataaaat |
41522587 |
T |
|
Q |
116 |
a |
116 |
Q |
|
|
| |
|
|
T |
41522588 |
a |
41522588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 4326034 - 4325973
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
4326034 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
4325973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 5822093 - 5822024
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||| | |||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
5822093 |
ataaaaaaaaggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
5822024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 43633111 - 43633176
Alignment:
Q |
107 |
caataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||| |||||||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| |
|
|
T |
43633111 |
caattaaatataggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtccc |
43633176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 5876895 - 5876835
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
5876895 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
5876835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 12823259 - 12823319
Alignment:
Q |
112 |
aaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||| |||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
12823259 |
aaataaaggcttaattactcttttggtcccttaacttattttttggtttcgttttggtccc |
12823319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 21524716 - 21524656
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
21524716 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
21524656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 45467436 - 45467496
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
45467436 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
45467496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 10134606 - 10134665
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||| |||| |||| ||||||||| || || |||||||||| ||||||||||||| |
|
|
T |
10134606 |
taggcttaaatgctctttttgtcccttaagtatttatttggtatcgctttggtcccataa |
10134665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 29802631 - 29802576
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
29802631 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtccc |
29802576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 31445661 - 31445728
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31445661 |
aaaaaataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
31445728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 36194996 - 36194937
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||| |||| |||||||||||||||| |||| |||||||||||||||||||| |
|
|
T |
36194996 |
taggcttaaatgctcttttagtcccttaacttgattttaagtatcggtttggtcccataa |
36194937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 45377427 - 45377478
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtc |
170 |
Q |
|
|
|||||||||| |||||| ||||||||| | |||||||||||||| ||||||| |
|
|
T |
45377427 |
ggcttaattgttattttcgtcccttaattgattttttggtatcgctttggtc |
45377478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 162415 - 162461
Alignment:
Q |
132 |
ttttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
162415 |
ttttagtcccttaacttattttttggtttcgttttggtcccttaact |
162461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 2222031 - 2221965
Alignment:
Q |
112 |
aaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
2222031 |
aaatataggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
2221965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 11760980 - 11760914
Alignment:
Q |
112 |
aaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||| |||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
11760980 |
aaataaaggcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact |
11760914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 3318098 - 3318037
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||||| |
|
|
T |
3318098 |
taggcttaattactcttttggtcccttaatttattttttggtttcgttttggtcccttaact |
3318037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 7116470 - 7116531
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
7116470 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
7116531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 9807340 - 9807279
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
9807340 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact |
9807279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 11713198 - 11713259
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
11713198 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
11713259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 12849962 - 12850023
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||| |||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
12849962 |
taggctaaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
12850023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 13463206 - 13463153
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||||||||| |||| ||||||||| | ||| |||||||||| ||||||||| |
|
|
T |
13463206 |
ggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtccc |
13463153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 18476140 - 18476071
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| ||||||||| |||| |||| |||||||||||| || || |||||| ||||||||| ||||| |
|
|
T |
18476140 |
ataaaatttaggcttaaatgctcttttggtcccttaactatttaatttgtatcgctttggtcccctaact |
18476071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 33099030 - 33098969
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
33099030 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact |
33098969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 41836492 - 41836553
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattt-tttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| ||||||||||||||||||||| ||||||||| ||||| ||| ||||| |
|
|
T |
41836492 |
aggcttaaatgctcttttagtcccttaactaatttaattggtatcgctttggacccttaact |
41836553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 162726 - 162662
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||| || ||| ||||||||||| |||||| ||| ||| ||||||||| ||||| |
|
|
T |
162726 |
atataggcttaattactctttgggtcccttaacttatttttaggtttcgttttggtcccttaact |
162662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 2221593 - 2221653
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
2221593 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
2221653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 7042021 - 7041957
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||||||| |||||| |||| |||||||||||| || | | |||||| ||||||||| |
|
|
T |
7042021 |
aataaaatataggctaaattgcatttttggtcccttaactatttatatagtatcgctttggtccc |
7041957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 10398757 - 10398697
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
10398757 |
aggcttaattactcatttggtcccttaacttattttttggtttcgttttggtcccttaact |
10398697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 11901554 - 11901494
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| | | ||||||||| ||||| |
|
|
T |
11901554 |
aggcttaattacttttttggtcccttaacttattttttggtttggttttggtcccttaact |
11901494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 14054787 - 14054847
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
14054787 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtaccttaact |
14054847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 22013461 - 22013521
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
22013461 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
22013521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 26060105 - 26060165
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
26060105 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
26060165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 31933645 - 31933581
Alignment:
Q |
112 |
aaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
|||||||||||||| |||| |||| ||||||||||| ||| |||||||||||||||||||| |
|
|
T |
31933645 |
aaatataggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataa |
31933581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 31988513 - 31988573
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31988513 |
aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact |
31988573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 41155073 - 41155013
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
41155073 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
41155013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 41387612 - 41387560
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggt |
169 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| |
|
|
T |
41387612 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggt |
41387560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 45123219 - 45123279
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
45123219 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
45123279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 45466360 - 45466300
Alignment:
Q |
110 |
taaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtc |
170 |
Q |
|
|
||||||| |||||||| |||| |||| |||||||||||| || ||||||||| ||||||| |
|
|
T |
45466360 |
taaaataaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtc |
45466300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 45467868 - 45467808
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| | | ||||||||| ||||| |
|
|
T |
45467868 |
aggcttaattactcttttggtcccttaacttattttttggttttgttttggtcccttaact |
45467808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 7184879 - 7184989
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact-nnnnnnnggtccgttttggtattttaacttttgctcc |
215 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| |
|
|
T |
7184879 |
taggcttaattgctattttagtctcttaactaattttttggtatcggtttgatcccataactaaaaaaaaggtccgttttggtattttaacttttactcc |
7184978 |
T |
|
Q |
216 |
gttacatgttt |
226 |
Q |
|
|
||||| ||||| |
|
|
T |
7184979 |
gttacttgttt |
7184989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 36889806 - 36889748
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
36889806 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
36889748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 36888337 - 36888397
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
36888337 |
aggcttaattgctattttagtcccttagctaattttttggtatcggtttggtcccataact |
36888397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 13809426 - 13809542
Alignment:
Q |
120 |
gcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccgtta |
219 |
Q |
|
|
|||||||| ||||||||| |||||||||||||||||||||||| |||| ||| |||| | | |||||||| ||||||||||||||| ||||| | |
|
|
T |
13809426 |
gcttaatttctattttaggcccttaactaattttttggtatcgctttgatcctataattaaaaaaag-tccgttttagtattttaacttttgttccgtca |
13809524 |
T |
|
Q |
220 |
catgttttagtcctttcc |
237 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
13809525 |
catgttttagtcctttcc |
13809542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 13810644 - 13810521
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaactttt |
210 |
Q |
|
|
|||| |||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |
|
|
T |
13810644 |
aaaagataggcttaattgcaattttagtctcttaactaa--ttttggtatcgctttggtcccataactaaaaaaaagtccgatttggtattttaactttt |
13810547 |
T |
|
Q |
211 |
gctccgttacatgttttagtcctttc |
236 |
Q |
|
|
| || ||| | |||||| ||| |||| |
|
|
T |
13810546 |
gttctgtttcttgttttggtcatttc |
13810521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 35738361 - 35738453
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttt |
209 |
Q |
|
|
||||||||||| ||||||| || ||||||||||||||||||||||| |||||| ||||| || | ||| |||||||||||||||||| |
|
|
T |
35738361 |
taggcttaattactattttcgttccttaactaattttttggtatcgctttggttccatatctaaaatttgatccattttggtattttaacttt |
35738453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 7031803 - 7031864
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
7031803 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
7031864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 7032224 - 7032155
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||||||||||||| || |||| ||||||||||| ||||||| || ||| ||||||||| ||||| |
|
|
T |
7032224 |
ataacatataggcttaattactcttttggtcccttaacttattttttagtttcgttttggtcccttaact |
7032155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 27516157 - 27516218
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
27516157 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
27516218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 7983472 - 7983508
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaa |
65 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| |
|
|
T |
7983472 |
ttttaggaatgattatgttgatgaagatgaagaagaa |
7983508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 26892463 - 26892523
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||| |||| ||||||||||| |||||||||| ||| |||| |||| ||||| |
|
|
T |
26892463 |
aggcttaattgctcttttggtcccttaacttattttttggtttcgttttgatcccttaact |
26892523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 26897902 - 26897962
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||| |||| ||||||||||| |||||||||| ||| |||| |||| ||||| |
|
|
T |
26897902 |
aggcttaattgctcttttggtcccttaacttattttttggtttcgttttgatcccttaact |
26897962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 32194892 - 32194828
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
32194892 |
atataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
32194828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 34166841 - 34166901
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaacta-attttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||| ||||||||| || |||||||||||| |||| ||||||||| |
|
|
T |
34166841 |
taggcttaattgctattttcgtcccttaaatattttttttggtatcagttttgtcccataa |
34166901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 15130120 - 15130053
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||||||||||| || |||| |||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
15130120 |
aaaaaataggcttaattactcttttgatcccttaacttattttttggtttcgttttggtcccttaact |
15130053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 31557091 - 31557150
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
31557091 |
ggcttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact |
31557150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 34618580 - 34618521
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
34618580 |
ggcttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact |
34618521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 35251488 - 35251555
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||| |||||||||| || |||| ||||||||||| | |||||||| ||| ||||||||| ||||| |
|
|
T |
35251488 |
aaaataaaggcttaattactcttttggtcccttaacttaatttttggtttcgttttggtcccttaact |
35251555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 38578242 - 38578187
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
38578242 |
taggcttaattactcttttggtcccttaacttattttttggtgtcgttttggtccc |
38578187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 19297526 - 19297580
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
||||||||||||| |||| ||||||||| | ||| |||||||||| ||||||||| |
|
|
T |
19297526 |
aggcttaattgctcttttcgtcccttaagttattatttggtatcgttttggtccc |
19297580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 30785836 - 30785882
Alignment:
Q |
132 |
ttttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
30785836 |
ttttagtcccttaacttattttttggtttcgttttggtcccttaact |
30785882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 31309692 - 31309646
Alignment:
Q |
132 |
ttttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
31309692 |
ttttagtcccttaacttattttttggtttcgttttggtcccttaact |
31309646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 3603504 - 3603557
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||||||| |||||| |||||||||||| || ||| |||||| ||||||||| |
|
|
T |
3603504 |
ggcttaattgttattttcgtcccttaactatttatttagtatcgctttggtccc |
3603557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 4602877 - 4602816
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
4602877 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
4602816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 7983526 - 7983567
Alignment:
Q |
70 |
aagaaaggtgagaaaaatatttagtgttggttgtttacaata |
111 |
Q |
|
|
||||||||||||||||||||| |||||||| |||||||||| |
|
|
T |
7983526 |
aagaaaggtgagaaaaatattaggtgttggtggtttacaata |
7983567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 11131248 - 11131183
Alignment:
Q |
113 |
aatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||| |||| ||| |||| |||||||||||||| || || |||||||||| ||||||||| ||||| |
|
|
T |
11131248 |
aataaaggcataaatgctcttttagtcccttaagtatttatttggtatcgctttggtcccttaact |
11131183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 15044738 - 15044791
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcc |
171 |
Q |
|
|
|||||||| ||||||||| |||||||||||| || ||||||||| |||||||| |
|
|
T |
15044738 |
aggcttaagtgctattttggtcccttaactatttaattggtatcgctttggtcc |
15044791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 18904597 - 18904658
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| ||||||| || ||| ||||||||| ||||| |
|
|
T |
18904597 |
taggcttaattactcttttggtcccttaacttatttttttgtttcgttttggtcccttaact |
18904658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 27516601 - 27516540
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
27516601 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
27516540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 28190550 - 28190493
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||||||||||||||| |||| ||||||||| | ||| ||||||||| ||||||||| |
|
|
T |
28190550 |
tataggcttaattgcttttttcgtcccttaagttattatttggtatcattttggtccc |
28190493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 28958179 - 28958114
Alignment:
Q |
113 |
aatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||| || |||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
28958179 |
aatattggtttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
28958114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 31309827 - 31309766
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
31309827 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
31309766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 36099291 - 36099352
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
36099291 |
taggcttaattactcatttggtcccttaacttattttttggtttcgttttggtcccttaact |
36099352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 3124327 - 3124387
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| | |||||||||||||||||||| | |||| || ||||||||||||||| |
|
|
T |
3124327 |
aggcttaattacatttttagtcccttaactaattatgtggtttcattttggtcccataact |
3124387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 7182758 - 7182698
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || ||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
7182758 |
aggcttaattactcgtttggtcccttaacttattttttggtttcgttttggtcccttaact |
7182698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 30786089 - 30786025
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||| | |||| || |||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
30786089 |
atataggcttaattatttttttggttccttaacttattttttggtgtcgttttggtcccttaact |
30786025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 35589229 - 35589165
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||| || |||| ||||||||||| ||||||||| | | ||||||||| ||||| |
|
|
T |
35589229 |
atataggcttaattactcttttggtcccttaacttattttttggctttgttttggtcccttaact |
35589165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 45001045 - 45001105
Alignment:
Q |
111 |
aaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcc |
171 |
Q |
|
|
||||| ||||||||||| || ||| ||||||||||| |||||||||| ||| |||||||| |
|
|
T |
45001045 |
aaaatttaggcttaattactcatttggtcccttaacttattttttggtttcgttttggtcc |
45001105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 32)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 19718950 - 19718830
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactnnnnnnnggtccgttttggtattttaacttttgctccg |
216 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||| |||| |
|
|
T |
19718950 |
taggcttaattgctattttagtcctttaactaattttttggtatcgctttgatcctataactaaaaaaaaatccgttttggtattttaacttttattccg |
19718851 |
T |
|
Q |
217 |
ttacatgttttagtcctttcc |
237 |
Q |
|
|
| ||||||||||||||||||| |
|
|
T |
19718850 |
tcacatgttttagtcctttcc |
19718830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 4959559 - 4959620
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| ||||||||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
4959559 |
taggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaact |
4959620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 11079690 - 11079629
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| ||||||||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
11079690 |
taggcttaaatgctattttggtcccttaactatttaattggtatcgttttggtcccttaact |
11079629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 19798788 - 19798719
Alignment:
Q |
109 |
ataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||||||| |||| |||| ||||||||| || || ||||||||| ||||||||| ||||| |
|
|
T |
19798788 |
ataaaatataggcttaaatgctcttttggtcccttaagtatttatttggtatcactttggtcccttaact |
19798719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 22803650 - 22803589
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
22803650 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
22803589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 37812229 - 37812290
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
37812229 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
37812290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 42026724 - 42026663
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
42026724 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
42026663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 1155963 - 1156023
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
1155963 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
1156023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 7426990 - 7426954
Alignment:
Q |
29 |
ttttaggaatgattatgttgatgaagattaagaagaa |
65 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| |
|
|
T |
7426990 |
ttttaggaatgattatgttgatgaagatgaagaagaa |
7426954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 30112769 - 30112709
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||||| |||||||||||||| || || ||||||||| ||||||||| ||||| |
|
|
T |
30112769 |
aggcttaattgctcttttagtcccttaagtatttaattggtatcgctttggtcccttaact |
30112709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 42026278 - 42026342
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
42026278 |
atataggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
42026342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 4349495 - 4349554
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| |||| |||||||||| |
|
|
T |
4349495 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttgatcccataact |
4349554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 4349933 - 4349874
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
4349933 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
4349874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 6172399 - 6172340
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
6172399 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
6172340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 9040743 - 9040802
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
9040743 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
9040802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 9438237 - 9438296
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
9438237 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
9438296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 11079124 - 11079187
Alignment:
Q |
115 |
tataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| |||| ||||||||| ||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
11079124 |
tataggcttaaatgctcttttagtccattaactatttaattggtatcgctttggtcccttaact |
11079187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 24100326 - 24100267
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| |||||||||| || ||||| |
|
|
T |
24100326 |
ggcttaattactcttttggtcccttaacttattttttggtttcggtttggttccttaact |
24100267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 31369985 - 31369926
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
31369985 |
ggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
31369926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 42382231 - 42382172
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
42382231 |
ggcttaattactcttttggtcccttaacttattttttggtttcgatttggtcccttaact |
42382172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 7426936 - 7426890
Alignment:
Q |
70 |
aagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
T |
7426936 |
aagaaaggtgagaaaaatattaggtgatggtagtttacaataaaata |
7426890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 8127467 - 8127525
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtccc |
172 |
Q |
|
|
|||| ||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
8127467 |
atattggcttaattactcttttggtcccttaacttattttttggtttcgttttggtccc |
8127525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 16670089 - 16670027
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
16670089 |
ataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
16670027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 43476499 - 43476437
Alignment:
Q |
116 |
ataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
43476499 |
ataggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
43476437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 435552 - 435613
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
435552 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
435613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 6157557 - 6157496
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
6157557 |
taggcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact |
6157496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 16791969 - 16792030
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
16791969 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
16792030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 21289590 - 21289529
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
21289590 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
21289529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 25333247 - 25333194
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcc |
171 |
Q |
|
|
|||||||| ||||||||| |||||||||||| || ||||||||| |||||||| |
|
|
T |
25333247 |
aggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcc |
25333194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 37812607 - 37812550
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
37812607 |
cttaattacttttttggtcccttaacttattttttggtttcgttttggtcccttaact |
37812550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 17339794 - 17339854
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
17339794 |
aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact |
17339854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 24100759 - 24100699
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
24100759 |
aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
24100699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0194 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0194
Description:
Target: scaffold0194; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 19304 - 19244
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
19304 |
aggcttaattgttactttagttccttaactaattttttgatatcggtttggtcccataact |
19244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0194; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 18070 - 18127
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
T |
18070 |
cttaattactattttagtcccttaactaatttttgagtatcggtttggtctcataact |
18127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 129488 - 129420
Alignment:
Q |
108 |
aataaaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |
|
|
T |
129488 |
aataaaatacaggcttaattgttattttcgtcccttaacttattttttggtatcactttggtcccataa |
129420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 123422 - 123481
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||| |
|
|
T |
123422 |
taggcttaattgctattttcgtcccttaactaatttcttggtattgctttggtcccataa |
123481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 134298 - 134357
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||| |
|
|
T |
134298 |
taggcttaattgctattttcgtcccttaactaatttcttggtattgctttggtcccataa |
134357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 56508 - 56565
Alignment:
Q |
59 |
agaagaaaatgaagaaaggtgagaaaaatatttagtgttggttgtttacaataaaata |
116 |
Q |
|
|
||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
T |
56508 |
agaagaagatgaagaaaggtgagaaaaatattaggtgttggtggtttacaataaaata |
56565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 8275 - 8215
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
8275 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
8215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 83445 - 83385
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| ||||||||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
83445 |
aggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaact |
83385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 1470 - 1534
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
1470 |
atataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
1534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 11489 - 11423
Alignment:
Q |
112 |
aaatataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||||||| || |||| ||||||||||| | |||||||| ||| |||||| || ||||| |
|
|
T |
11489 |
aaatataggcttaattactcttttggtcccttaacttaatttttggtttcgttttggttccttaact |
11423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 25963 - 26020
Alignment:
Q |
119 |
ggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataa |
176 |
Q |
|
|
||||||| |||| |||| ||||||||| || || |||||||||| ||||||||||||| |
|
|
T |
25963 |
ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccataa |
26020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135 (Bit Score: 30; Significance: 0.0000001; HSPs: 6)
Name: scaffold0135
Description:
Target: scaffold0135; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 5917 - 5856
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
5917 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
5856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 10132 - 10071
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
10132 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
10071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 14347 - 14286
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
14347 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
14286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 18562 - 18501
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
18562 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
18501 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 22777 - 22716
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
22777 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
22716 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 26992 - 26931
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||| ||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
26992 |
taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaact |
26931 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 57020 - 57081
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| | |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
57020 |
taggcttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
57081 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 57617 - 57557
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| | |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
57617 |
aggcttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaact |
57557 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 100040 - 99979
Alignment:
Q |
117 |
taggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
100040 |
taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtaccttaact |
99979 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 172967 - 172910
Alignment:
Q |
121 |
cttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||||| |
|
|
T |
172967 |
cttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaact |
172910 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 230871 - 230931
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||| |||| |||| |||||||||||| || ||||||||| ||||||||| ||||| |
|
|
T |
230871 |
aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact |
230931 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 144717 - 144777
Alignment:
Q |
118 |
aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||| || |||| ||||||||||| |||||||||| ||| |||||| || ||||| |
|
|
T |
144717 |
aggcttaattactcttttggtcccttaacttattttttggtttcgttttggttccttaact |
144777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 242224 - 242160
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataact |
178 |
Q |
|
|
|||||||||||| |||| |||| |||||||||||| || |||||||| ||||||||| ||||| |
|
|
T |
242224 |
atataggcttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact |
242160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 429211 - 429163
Alignment:
Q |
114 |
atataggcttaattgctattttagtcccttaactaattttttggtatcg |
162 |
Q |
|
|
||||||||||||||||| |||| ||||||||| | ||| |||||||||| |
|
|
T |
429211 |
atataggcttaattgcttttttggtcccttaagttattatttggtatcg |
429163 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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