View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1565_low_24 (Length: 246)
Name: NF1565_low_24
Description: NF1565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1565_low_24 |
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[»] scaffold0140 (2 HSPs) |
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[»] scaffold1674 (2 HSPs) |
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[»] scaffold0025 (2 HSPs) |
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[»] scaffold0005 (1 HSPs) |
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[»] scaffold0011 (1 HSPs) |
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[»] scaffold0133 (2 HSPs) |
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[»] scaffold0006 (1 HSPs) |
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[»] scaffold0250 (1 HSPs) |
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[»] scaffold1899 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 38)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 16932602 - 16932839
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||| |
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|
T |
16932602 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctcataaccacttcagccatcggaatatcttccgccttctcgaaga |
16932700 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |
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|
T |
16932701 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacacaggacatctcccgcttccttgaagatcacc |
16932800 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16932801 |
ttgcatccaatcacccttggcattcttttagagtaatct |
16932839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 22781193 - 22781428
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| || | ||||| ||| |||||| ||||||||||||||||||| |
|
|
T |
22781193 |
atctacttgtactcaatcacccttggctttt-agagtaatccacaagtatacacctc--aatcccttcagccatcggaatgtcttccgccttctcgaaga |
22781289 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
22781290 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcctgcttccttgaagatcacc |
22781389 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
22781390 |
ttgcatccaatcacccttggcattcttttagagtaatct |
22781428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 11007024 - 11007259
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||| |
|
|
T |
11007024 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccacttcagccatcagaatatcttccgccttctcgaaga |
11007120 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||| |
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|
T |
11007121 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacacagaacatctcctggttccttgaagatcacc |
11007220 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||||||||||||| |||||||||||| |||||| |
|
|
T |
11007221 |
ttgcatccaatcacccttgacattcttttagagtaatct |
11007259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 9174927 - 9175162
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
9174927 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacct--taaccccttcagccctcggaatatcttccgccttctcgaag- |
9175022 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
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|
T |
9175023 |
gtccttgcagtccaactacactaggaattttaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcccgcttccttgaagatcacc |
9175122 |
T |
|
Q |
201 |
ttgcatccaatca--cccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||| |||||||| ||||||||| |||||| |
|
|
T |
9175123 |
ttgcatccaatcacccccttggccttcttttaggataatc |
9175162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22045172 - 22045387
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
22045172 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
22045267 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| |
|
|
T |
22045268 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaccgcagaacatctcccgcttccttgaagatcacc |
22045367 |
T |
|
Q |
201 |
ttgcatccaatcacccttgg |
220 |
Q |
|
|
|||||| ||||||||||||| |
|
|
T |
22045368 |
ttgcattcaatcacccttgg |
22045387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 36379822 - 36379595
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| | ||| |||||| ||||| |||||||||| |
|
|
T |
36379822 |
atctacttgtgcccaatcacccttggatttttagggtaatccacaagtatacacct--taacccctttagccatcggaatgatttccgtcttctcgaag- |
36379726 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||| || | | ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |
|
|
T |
36379725 |
gtccttgcagtccaactacgctggcaattttaggtagttccacaagcattcaccataacatcttcaacacaagacatctcccgcttccttgaagatcacc |
36379626 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||| |||||||||||||| || |||||| |
|
|
T |
36379625 |
ttgcattcaatcacccttggcctttttttag |
36379595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 16454846 - 16454674
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
16454846 |
taacctcttcagccatcggaacgttttccgccttctcaaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccataa |
16454747 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
T |
16454746 |
catcttcaacacaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttttttag |
16454674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 75 - 231
Target Start/End: Original strand, 14788242 - 14788397
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || | |
|
|
T |
14788242 |
cggaatgtcttccgccttctcgaag-gtccttgcagtccatctacactaggaattttaggtagttccacaagcattcaccataacatcttcaacacagga |
14788340 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
T |
14788341 |
catctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttttttag |
14788397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 12396607 - 12396779
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
12396607 |
taacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggagttttaggcagttccacaagcattcaccataa |
12396706 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||| | || ||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||| |
|
|
T |
12396707 |
catcttcaccacaggacatctcatgcttccttgaagatcaccttacatccaatcacccttggcctttttttag |
12396779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 12401549 - 12401721
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
12401549 |
taacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggagttttaggcagttccacaagcattcaccataa |
12401648 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||| | || ||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||| |
|
|
T |
12401649 |
catcttcaccacaggacatctcatgcttccttgaagatcaccttacatccaatcacccttggcctttttttag |
12401721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 75 - 231
Target Start/End: Original strand, 22801581 - 22801736
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
T |
22801581 |
cggaatgtcttccgccttctcgaat-gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccataacatcttcaacgcagga |
22801679 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||| |||||||||||| | ||||||||||||||||||||||| || |||||| |
|
|
T |
22801680 |
catctcccgcttccttgaaggtttccttgcatccaatcacccttggcctttttttag |
22801736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 36920344 - 36920497
Alignment:
Q |
77 |
gaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataaca |
176 |
Q |
|
|
|||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||||| || ||| |
|
|
T |
36920344 |
gaatgtcttccgccttctcgaag-gtccttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccataatctcttcaacacaggaca |
36920442 |
T |
|
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||||||||||| || ||||||||||||||||||||||| || |||||| |
|
|
T |
36920443 |
tctcctgcttccttgaaggtctccttgcatccaatcacccttggcctttttttag |
36920497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5100412 - 5100196
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| || ||||||||||||||||| ||||||||| |||||||||||||| ||| | ||||| || ||||||||||| | |||||||||| |
|
|
T |
5100412 |
atctacttgtgcctaatcacccttggctttt-agagtaatcaacaagtatacacct--taatcccttcagccctcggaatatcttgtgtcttctcgaag- |
5100317 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||| || || || ||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |
|
|
T |
5100316 |
gtccttgcaatctaattatgctaggtattttaggtagttcaacaagcattcaccataacatcttcaacgcaggacatctcccgcttccttgaagatctcc |
5100217 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
5100216 |
ttgcatccaatcactcttggc |
5100196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 47564296 - 47564125
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| | |||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |
|
|
T |
47564296 |
taaccccttcagccatcagaatattttccgccttctcgaag-gtccttgcagtccaactacgctaggaattttaggtagtttcacaagcattcaccataa |
47564198 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
| |||||||| || |||| ||| ||||||||||| || ||||||||||||||||||||||| || |||||| |
|
|
T |
47564197 |
cctcttcaacacaatacatttcccgcttccttgaaaatttccttgcatccaatcacccttggcctttttttag |
47564125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 77 - 230
Target Start/End: Complemental strand, 24880033 - 24879882
Alignment:
Q |
77 |
gaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataaca |
176 |
Q |
|
|
|||| |||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||| || ||| |
|
|
T |
24880033 |
gaatgtcttccaccttctcgaag-gtccttgcagtccaactactctaggaattttaggtagttccacaagcattcatcataacatcttcaacacaggaca |
24879935 |
T |
|
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggcattctttta |
230 |
Q |
|
|
||||| |||||| |||| || |||||||||||||||||||||||| || ||||| |
|
|
T |
24879934 |
tctcccgcttcc-tgaatattaccttgcatccaatcacccttggccttttttta |
24879882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 22133116 - 22133271
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| ||||||| | |||||||| |
|
|
T |
22133116 |
tcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcc |
22133214 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
22133215 |
cgcttccttgaagatcaccttgcatccaatcacccttggccttcttttaggataatc |
22133271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 12396529 - 12396617
Alignment:
Q |
77 |
gaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttca |
166 |
Q |
|
|
|||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| |||||| |
|
|
T |
12396529 |
gaatgtcttccgccttctcgaag-gtccttgcagtccaactaaactaggaattttaggtagttccacaagcattcaccttaacctcttca |
12396617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 12401471 - 12401559
Alignment:
Q |
77 |
gaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttca |
166 |
Q |
|
|
|||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| |||||| |
|
|
T |
12401471 |
gaatgtcttccgccttctcgaag-gtccttgcagtccaactaaactaggaattttaggtagttccacaagcattcaccttaacctcttca |
12401559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 3825206 - 3825331
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||| | ||| | ||||| || | |||| |||||||||||||||||| |||||||||||||||||| |||| || ||||||||||| |
|
|
T |
3825206 |
tccacaagtttacaccccttaaacccttcagccctcagaatgtcttccgccttctcgaag-gtccttgcagtccaactatactatgaattttaggtagtt |
3825304 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
3825305 |
ccacaagcattcaccttaacctcttca |
3825331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 18535653 - 18535798
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccaca-------agcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| |||||||| | | |
|
|
T |
18535653 |
tcttccgcgttctagaagag-ccttgcagtccaactacactaggaattttatgtagttccacattccacaagtatccaccataacctcttcaacacggga |
18535751 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
T |
18535752 |
catctcccacttccttgaagatctccttgcatccaatcacccttggc |
18535798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 3825321 - 3825420
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||| | || |||||||||||||| |
|
|
T |
3825321 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagatttatatagttctacgagcattcaccataa |
3825420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 16454926 - 16454836
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttca |
166 |
Q |
|
|
|||||| ||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||| |||||||| |||| |||||| |
|
|
T |
16454926 |
cggaatgtcttctgccttctcgaag-gtccttgcagtccaactacactaagaattttaggtagttccacaaacattcaccttaacctcttca |
16454836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 10114328 - 10114219
Alignment:
Q |
112 |
ccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaa-cgcataacatctcctgcttccttgaagatcaccttgcatccaa |
210 |
Q |
|
|
||||||||||||||| ||||||||||| ||||||| || |||||||| ||||||| | | ||| ||||| ||||||||||||||| |||| ||||||| |
|
|
T |
10114328 |
ccaactacactaggaattttaggtagttccacaagtatataccataacctcttcaaccacggaacgtctcccgcttccttgaagatctccttccatccaa |
10114229 |
T |
|
Q |
211 |
tcacccttgg |
220 |
Q |
|
|
|||||||||| |
|
|
T |
10114228 |
tcacccttgg |
10114219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 22045036 - 22045198
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | ||||||| |
|
|
T |
22045036 |
taacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataa |
22045134 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
22045135 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
22045198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 12740263 - 12740306
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
12740263 |
tctcccgcttccttgaagatcaccttgcatccaatcacccttgg |
12740306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 12748469 - 12748512
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
12748469 |
tctcccgcttccttgaagatcaccttgcatccaatcacccttgg |
12748512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34571132 - 34571175
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
34571132 |
tctcccgcttccttgaagatcaccttgcatccaatcacccttgg |
34571175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 3577453 - 3577557
Alignment:
Q |
65 |
cttcacccaccggaatatcttccgccttctcgaagag--tccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatc |
162 |
Q |
|
|
||||| ||| |||||| ||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||| ||| ||| | ||||||||| || |
|
|
T |
3577453 |
cttcaaccatcggaatgtcttccgccttcttgaagacaatccttgca-tccaactacactaggaattttaggtagttccataagtctacaccataacctc |
3577551 |
T |
|
Q |
163 |
ttcaac |
168 |
Q |
|
|
|||||| |
|
|
T |
3577552 |
ttcaac |
3577557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 9174792 - 9174953
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||| ||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
9174792 |
aacctcttcagccatcggaatgtcttctgccttctcgaaga-tgcttggagtccaactacgctaggaatttcaggtagttctacaagactataccataac |
9174890 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
9174891 |
ctcttcaatacgagatatctccagctttccttgaagatctacttgtacccaatcacccttggc |
9174953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 11006889 - 11007050
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||||||||| ||||||||||||| | |||| ||| ||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
11006889 |
aacctcttcagccatcggaatatcttctgccttctcgaaga-tgcttgtagttcaactacgctaggaatttcaggtagttctacaagactataccataac |
11006987 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
11006988 |
ctcttcaatacgagatatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
11007050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 36379941 - 36379797
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| ||||| ||||||||||||| |||||| | | ||||||||||||| ||| | ||| | | ||||| | |||||||| ||||||| || || |
|
|
T |
36379941 |
cggaatgtcttctgccttctcgaaga-tccttgtatccaaactacactaggaatttcaagtaattctacaagactataccataacctcttcaatacagaa |
36379843 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||||| ||||||||||||||| |||| |||||||||||||| |
|
|
T |
36379842 |
catctcccgcttccttgaagatctacttgtgcccaatcacccttgg |
36379797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 3577642 - 3577748
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagag--tccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccat |
156 |
Q |
|
|
||||| ||||| ||| |||||| |||||| ||||| ||||| |||||||| |||||||||||||||| ||||||||||| ||||||| | |||||| |
|
|
T |
3577642 |
taacctcttcaaccatcggaatgccttccgacttcttgaagatcatccttgca-tccaactacactaggaattttaggtagttccacaagtctacaccat |
3577740 |
T |
|
Q |
157 |
aacatctt |
164 |
Q |
|
|
||| |||| |
|
|
T |
3577741 |
aacctctt |
3577748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 5137731 - 5137687
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
T |
5137731 |
tctcccgcctccttgaagatcaccttgcatccgatcacccttggc |
5137687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 16932466 - 16932573
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||| ||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | ||||||| |
|
|
T |
16932466 |
taacctcttcagccatcggaatgtcttccgtcttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataa |
16932564 |
T |
|
Q |
159 |
catcttcaa |
167 |
Q |
|
|
| ||||||| |
|
|
T |
16932565 |
cctcttcaa |
16932573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 35371380 - 35371436
Alignment:
Q |
112 |
ccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaac |
168 |
Q |
|
|
||||||| ||||||| ||||||||||| ||||||| | |||||||||||||||||| |
|
|
T |
35371380 |
ccaactatactaggacttttaggtagttccacaagtttacaccataacatcttcaac |
35371436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 22781057 - 22781219
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttcc-gccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
|||| ||||| ||| |||||| |||||| ||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | ||||||| |
|
|
T |
22781057 |
aacctcttcagccatcggaatgtcttcccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataa |
22781155 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| |||| | |||||||||||||| |
|
|
T |
22781156 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttgtactcaatcacccttggc |
22781219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 18535538 - 18535612
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt |
138 |
Q |
|
|
||||| ||||| ||| |||||| |||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||| |
|
|
T |
18535538 |
taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgtagtcc----acactaggaattttaggtagt |
18535612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 26559305 - 26559263
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
||||| |||||| |||||||| ||||||||||||||||||||| |
|
|
T |
26559305 |
tctcccgcttccgtgaagatctccttgcatccaatcacccttg |
26559263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 28)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34477875 - 34478110
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| | | | |||||||||||||||||||||||| |
|
|
T |
34477875 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccacttcagctatcagaatatcttccgccttctcgaaga |
34477971 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
34477972 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
34478071 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
34478072 |
ttgcatccaatcacccttggcattcttttagagtaatct |
34478110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 10756716 - 10756482
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
10756716 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccacttcagccatcggaatatcttccgccttctcgaag- |
10756621 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||| |
|
|
T |
10756620 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcaacgcataacatcttccgcttccttgaagatcacc |
10756521 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
10756520 |
ttgcatccaatcacccttggcattcttttagagtaatct |
10756482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 31544556 - 31544322
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
31544556 |
atctacttgtacccaatcacccttggctttt-agagtaatctacaagtatacacctc--aaccacttcagccatcggaatatcttccgccttctcgaag- |
31544461 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| || |
|
|
T |
31544460 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacacagaacatctcctgcttccttgaagatctcc |
31544361 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||||||||| |||| |||||||||| |||||| |
|
|
T |
31544360 |
ttgcatccaatcaccattggtcttcttttagagtaatct |
31544322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15355309 - 15355525
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
15355309 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
15355404 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||| |||||||||||||||||| |
|
|
T |
15355405 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcagcgcagaacatctcccgcttccttgaagatcacc |
15355504 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
15355505 |
ttgcatccaatcactcttggc |
15355525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 23666865 - 23666649
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
23666865 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
23666770 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||| |||||||||||||||||| |
|
|
T |
23666769 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcagcgcagaacatctcccgcttccttgaagatcacc |
23666670 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
23666669 |
ttgcatccaatcactcttggc |
23666649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 18468491 - 18468319
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18468491 |
taacctcttcagccatcggaacatcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
18468392 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||| ||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
T |
18468391 |
catcttcaatgcaaaacatctctcgcttccttgaagatcaccttgcatctaatcacccttggccttcttttag |
18468319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 27911973 - 27911747
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
27911973 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct--taaccccttcagccctcggaatgtcttccgccttctcgaag- |
27911878 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||| || || |
|
|
T |
27911877 |
gtccttgcagtctaactacactaggaattttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcccagttccttgaaggtctcc |
27911778 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||||||||||| || |||||| |
|
|
T |
27911777 |
ttgcatccaatcacccttggcctttttttag |
27911747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41586746 - 41586978
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
41586746 |
atctacttgtgcccaatcacccttgtcttt--agagtaatccacaagtacacacct--taaccccttcagccctcggaatgtcttccgccttctcgaag- |
41586840 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||| || || |
|
|
T |
41586841 |
gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcccgcttccttgaaggtctcc |
41586940 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||||||||||| | ||||||| ||||| |
|
|
T |
41586941 |
ttgcatccaatcacccttggcctctttttagagtaatc |
41586978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 18510151 - 18510378
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| | |||||||||||||||||| |||||||||||||||||||||||| |||| ||||| ||| |||||| |||||||||||||||||| |
|
|
T |
18510151 |
atctacttgtgctcaatcacccttggctttt-agagtaatccacaagtatacacctta-aaccccttcagccatcggaatgtcttccgccttctcgaag- |
18510247 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |
|
|
T |
18510248 |
gtccttgcagtctaactacgctaggtattttaggtagttccacaagcattcaccataacatcttcaacgcaggacatctcccgcttccttgaagatctcc |
18510347 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||| |||||||||||||||| || |||||| |
|
|
T |
18510348 |
ttgcctccaatcacccttggcctttttttag |
18510378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 6746840 - 6746668
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| || |
|
|
T |
6746840 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacgctaggatttttaggtagtcccacaagcattcaccacaa |
6746741 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |
|
|
T |
6746740 |
catcttcaacgcaggacatctcctgcttctttgaaggtcaccttgcatccaatcacccttggtcttcttttag |
6746668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 659506 - 659344
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
T |
659506 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggagttttaggtagttccacaaacattcaccataa |
659407 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||||||| || |||||||| |||||||||||| || ||||||||||||||||||||||| |
|
|
T |
659406 |
catcttcaacacaggacatctcccgcttccttgaaggtctccttgcatccaatcacccttggc |
659344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 20044435 - 20044298
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |
|
|
T |
20044435 |
tcttccgccttctcgaagagtccttgcagtccaactacactagaagttttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcc |
20044336 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
|||||||||||| | ||||||||||||||||||||| |
|
|
T |
20044335 |
cgcttccttgaaggtttccttgcatccaatcacccttg |
20044298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 20504659 - 20504829
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| | |||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
T |
20504659 |
taacctcttcagccatcagaatgtcttcctccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccataa |
20504757 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattctttta |
230 |
Q |
|
|
| |||||||| || |||||||| |||||||| ||| || |||||||||||||| ||||||||||| ||||| |
|
|
T |
20504758 |
cctcttcaacacaggacatctcccgcttccttaaaggtctccttgcatccaatcccccttggcattttttta |
20504829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 31466726 - 31466865
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||| | ||||||||| || |||||||| |
|
|
T |
31466726 |
tcttccgtcttctcgaagagtccttgtagtccaactacactaggagaattatgtagttccacaagcattcaccatgaaatcttcaacacaggacatctcc |
31466825 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||| ||||||| || ||||||||||||||||||||||| |
|
|
T |
31466826 |
cactttcttgaaggtctccttgcatccaatcacccttggc |
31466865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 659619 - 659496
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| ||||||| ||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
659619 |
tccacaagtttacacct--taaccccttcaaccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagtt |
659523 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
659522 |
ccacaagcattcaccttaacctcttca |
659496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 18468606 - 18468481
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||| ||| ||||| ||||| || |||||| |||||||||||||| ||| ||||||| |||||||| |||||||||||||||||||||| |
|
|
T |
18468606 |
tccacaagtttacagctcataaccccttcagccctcggaatgtcttccgccttctcaaag-gtccttgtagtccaacaacactaggagttttaggtagtc |
18468508 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
|||||||||||||| |||| |||||| |
|
|
T |
18468507 |
ccacaagcattcactttaacctcttca |
18468481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 6746955 - 6746830
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || | |||| |||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||| |
|
|
T |
6746955 |
tccacaagtttacacctcttaaccccttcagccctcagaatgtcttccgccttctcgaag-gtccttacagtccaactacgctaggaattttaggtagtt |
6746857 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
|||||||||||||| |||| |||||| |
|
|
T |
6746856 |
ccacaagcattcactttaacctcttca |
6746830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 31466607 - 31466711
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| | |||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||| |
|
|
T |
31466607 |
taaccccttcagccatcagaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaggtagttccacaagcattcaccttaa |
31466705 |
T |
|
Q |
159 |
catctt |
164 |
Q |
|
|
| |||| |
|
|
T |
31466706 |
cctctt |
31466711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 20044554 - 20044448
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||| |
|
|
T |
20044554 |
taaccccttcagccatcggaatgacttccgccttctcgaag-gtccttgcagtccaactacaccaggaattttaggtagttccacaagcattcactttaa |
20044456 |
T |
|
Q |
159 |
catcttca |
166 |
Q |
|
|
| |||||| |
|
|
T |
20044455 |
cctcttca |
20044448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 27912127 - 27911947
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| ||| |||||| ||||||||||||||||||| | |||| |||| |||||| |||||| ||| ||||||| |
|
|
T |
27912127 |
tccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtcaaactacgctaggaatttcaggtagtt |
27912029 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||| | |||||||| ||||||| | |||||||| || ||||||||||| |||| ||||||||||||||| |
|
|
T |
27912028 |
ctacaagactataccataacctcttcaatacgagacatctcccactaccttgaagatctacttgtgcccaatcacccttggc |
27911947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 34477740 - 34477901
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||||| ||||| | |||||||| |
|
|
T |
34477740 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagtcctacaagactataccataac |
34477838 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
34477839 |
ctcttcaatacgagatatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
34477901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 15355173 - 15355335
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaag-cattcaccataa |
158 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | | ||||||| |
|
|
T |
15355173 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagacttataccataa |
15355271 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
15355272 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
15355335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 23667001 - 23666839
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaag-cattcaccataa |
158 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | | ||||||| |
|
|
T |
23667001 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagacttataccataa |
23666903 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
23666902 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
23666839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 10756852 - 10756690
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaag-cattcaccataa |
158 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | | ||||||| |
|
|
T |
10756852 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagacttataccataa |
10756754 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
10756753 |
cctcttcaatacgagatatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
10756690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 31544692 - 31544530
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||| || | ||||| | ||||||| |
|
|
T |
31544692 |
taacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtggttctacaagactataccataa |
31544594 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
31544593 |
cctcttcaatacgagatatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
31544530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 42426970 - 42427005
Alignment:
Q |
185 |
ttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |
|
|
T |
42426970 |
ttccttgaagatcaccttgcatccaatcacccttgg |
42427005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 16408938 - 16408895
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
16408938 |
tctcccgcttcctcgaagatcaccttgcatccgatcacccttgg |
16408895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 26174417 - 26174374
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
26174417 |
tctcccgcttcctcgaagatcaccttgcatccgatcacccttgg |
26174374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 37)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 16227993 - 16227756
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||| |
|
|
T |
16227993 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctcataaccacttcagccatcagaatatcttccgccttctcgaaga |
16227895 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |
|
|
T |
16227894 |
gtccttgtagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacacaggacatctcccgcttccttgaagatcacc |
16227795 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16227794 |
ttgcatccaatcacccttggcattcttttagagtaatct |
16227756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 47179185 - 47178958
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
47179185 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccacttcagccatcggaatatcttccgccttctcgaag- |
47179090 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
T |
47179089 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacacagaacatctcctgcttccttgaagatcacc |
47178990 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttaga |
232 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
47178989 |
ttgcatccaatcacccttggcattcttttaga |
47178958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 51751860 - 51751626
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||| ||||| ||| |||||| |||||||||||||||||| |
|
|
T |
51751860 |
atctacttgtacccaatcaccattggctttt-agagtaatccataagtatacacctc--aaccccttcagccatcggaatgtcttccgccttctcgaag- |
51751765 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||| ||||||||||| |||||| ||| ||||||| | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
T |
51751764 |
gtccttgtagtccaactacgctaggaatttcaggtagttctacaagcattcaccataacatcttcaacgcagaacatctcccgcttccttgaagatcacc |
51751665 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
51751664 |
ttgcatccaatcacccttggcattcttttagagtaatct |
51751626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 20301954 - 20301728
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
20301954 |
atctacttgtacccaatcacccttggctttt-agagtaattcacaagtatacacct--taaccccttcagccctcggaatgtcttccgccttctcgaag- |
20301859 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||| |||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||| |
|
|
T |
20301858 |
gtccttgcagcccaactacgctaggaattttagttagtcccacaagcattcaccataacatcttcaatgcaaaacatctcccgcttccttaaagatcacc |
20301759 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||||||||||| ||||||||| |
|
|
T |
20301758 |
ttgcatccaatcacccttggccttcttttag |
20301728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 40 - 231
Target Start/End: Original strand, 27337622 - 27337812
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
27337622 |
tccacaagtttacacctcttaacctcttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggagttttaggtagtc |
27337720 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
27337721 |
ctacaagcattcaccataacatcttcaacgcaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggccttcttttag |
27337812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 59 - 238
Target Start/End: Original strand, 31736322 - 31736501
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
31736322 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
31736421 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| |
|
|
T |
31736422 |
catcttcaacgcaggacatctcccgcttccttgaagatcaccttgcatcctatcacccttggccttcttttagagtaatc |
31736501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 28842144 - 28841954
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| ||||||| | ||| ||||| || |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
28842144 |
tccacaagttaacacctcatgaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagtt |
28842046 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
28842045 |
ccacaagcgtacaccataacatcttcaacgcaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggccttcttttag |
28841954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 31423778 - 31423990
Alignment:
Q |
5 |
acttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtcc |
104 |
Q |
|
|
|||||| |||||||||||||||||||| || |||||||||||||| ||||| ||||| ||||| || |||||| |||||||||||||||||| |||| |
|
|
T |
31423778 |
acttgtgcccaatcacccttggcttttaag-gtaatccacaagtacacacca--taaccccttcagccctcggaatgtcttccgccttctcgaag-gtcc |
31423873 |
T |
|
Q |
105 |
ttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgc |
204 |
Q |
|
|
|| ||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||| |
|
|
T |
31423874 |
ttacagtccaactacactagaaattttaggtagttccacaagcattcaccataatctcttcaacacaggacatctcccgcttccttgaagatcaccttgc |
31423973 |
T |
|
Q |
205 |
atccaatcacccttggc |
221 |
Q |
|
|
||||||||||||||||| |
|
|
T |
31423974 |
atccaatcacccttggc |
31423990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25249390 - 25249606
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||| | ||||| || |||||| |||| | ||||||||||| |
|
|
T |
25249390 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtacgcacct--taaacccttcagccctcggaatgtctttcaccttctcgaag- |
25249485 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||| | |
|
|
T |
25249486 |
gtcgttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcccgcttctttgaagatcatc |
25249585 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||||||||||||||||| |
|
|
T |
25249586 |
ttgcatccaatcacccttggc |
25249606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 16430488 - 16430262
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||| |||| |||||||||||| ||||||| || ||||| |||||||| |||||| ||||| ||||| ||| | |||| | |||||||||||||||| |
|
|
T |
16430488 |
atctatttgttcccaatcaccctaggctttt-agggtaattcacaagtacacacct--taaccccttcagccatcagaatgtgttccgccttctcgaag- |
16430393 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||| |||||| |||||| ||||||||||| |||||||||||||||||||| |||||||| || |||||||| ||||||||||||||| || |
|
|
T |
16430392 |
gtccttgcagtctaactacgctaggaattttaggtagttccacaagcattcaccataacctcttcaacacaggacatctcccgcttccttgaagatctcc |
16430293 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||||||||||| || |||||| |
|
|
T |
16430292 |
ttgcatccaatcacccttggcctttttttag |
16430262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 14098740 - 14098889
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |
|
|
T |
14098740 |
tcttccgttttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcc |
14098839 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||||| || ||||||||||||||||||||||| || |||||| |
|
|
T |
14098840 |
cgcttccttgaaggtctccttgcatccaatcacccttggcctttttttag |
14098889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 50077532 - 50077746
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| | ||||||| ||||||||| | |||||||||||||||||||| | ||||| ||||| || | |||| |||||||||||||||||| |
|
|
T |
50077532 |
atctacttgtgcttaatcaccattggcttttaa-agtaatccacaagtatacactt--taaccccttcagccctcagaatgtcttccgccttctcgaag- |
50077627 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||| |||| |
|
|
T |
50077628 |
gtccttgcaatccaactacgctaggaattttaggtagttccacaagcattcaccataacatcttcaacacgggacatctcccgcttccttgaaggccacc |
50077727 |
T |
|
Q |
201 |
ttgcatccaatcacccttg |
219 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
50077728 |
ttgcatccaatcacccttg |
50077746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 25127293 - 25127121
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
T |
25127293 |
taacctcttcagccatcggaacgtcttccgccttcttgaagagtccttgcagtccaactacactaggagttttaggtagttccacaatcattcaccataa |
25127194 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||| | |||||||| |||||||||||| || |||| |||||||| ||||||||| || |||||| |
|
|
T |
25127193 |
catcttcaacaaaggacatctcccgcttccttgaaggtctccttccatccaattacccttggcctttttttag |
25127121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 75 - 231
Target Start/End: Original strand, 28202170 - 28202325
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| || | |
|
|
T |
28202170 |
cggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccataacattttcaacacagga |
28202268 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||| |||||||||||| || |||||||||||||||||||||| || |||||| |
|
|
T |
28202269 |
catctcccgcttccttgaaggtcttcttgcatccaatcacccttggcctttttttag |
28202325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 6996997 - 6996879
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| || | |
|
|
T |
6996997 |
cggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttccacaagcatttaccataacatcttcaacacagga |
6996899 |
T |
|
Q |
175 |
catctcctgcttccttgaag |
194 |
Q |
|
|
||||||| |||||||||||| |
|
|
T |
6996898 |
catctcccgcttccttgaag |
6996879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 31736207 - 31736332
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || |||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| |
|
|
T |
31736207 |
tccacaagtttacacctcataaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacgttaggaattttaggtagtc |
31736305 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
31736306 |
ccacaagcattcaccttaacctcttca |
31736332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 20302109 - 20301928
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| ||| |||||| ||||||||||||||||||| |||||| ||||||||||| |||||| ||| ||||||| |
|
|
T |
20302109 |
tccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcaggtagtt |
20302011 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||| | |||||||| ||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
20302010 |
ctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
20301928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 166
Target Start/End: Complemental strand, 25127372 - 25127283
Alignment:
Q |
76 |
ggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| |
|
|
T |
25127372 |
ggaatgtcttccgccttctcgaag-gtctttgcagtccaactacactaggaattttaggtagttccacaagcattcaccttaacctcttca |
25127283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 14098621 - 14098720
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||| |||||||| ||| |
|
|
T |
14098621 |
taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttctacaaacattcaccttaa |
14098719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 13126200 - 13126359
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| | |||| ||||||||||| ||||||| |||||||| ||||||||||||| || ||||||||||| ||||||| | |||||||| |
|
|
T |
13126200 |
taacctcttcagccatcagaatgtcttccgccttgtcgaaga-tccttgca-tccaactacactaagaattttaggtagttccacaagtctacaccataa |
13126297 |
T |
|
Q |
159 |
catcttcaacg-cataacatctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
| |||||||| | ||||||||| |||||||||||||| ||||||||| |||||||||||| |
|
|
T |
13126298 |
cctcttcaaccacggaacatctccc-cttccttgaagatctccttgcatctaatcacccttgg |
13126359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 13548139 - 13548257
Alignment:
Q |
102 |
tccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcat--aacatctcctgcttccttgaagatcac |
199 |
Q |
|
|
|||||||| |||||||| ||||||| ||||||||||| |||||||| | ||||||||| |||||||| ||| ||| ||||| |||||||||||||||| |
|
|
T |
13548139 |
tccttgca-tccaactaaactaggatttttaggtagttccacaagcctacaccataacctcttcaac-catggaacgtctcccgcttccttgaagatcat |
13548236 |
T |
|
Q |
200 |
cttgcatccaatcacccttgg |
220 |
Q |
|
|
||||||||| ||||||||||| |
|
|
T |
13548237 |
cttgcatccgatcacccttgg |
13548257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 31423623 - 31423800
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
|||||||||| |||||| ||||| ||||| ||| |||||| |||||| | |||||||||| |||||| ||||||||||| |||||| ||||||||||| |
|
|
T |
31423623 |
tccacaagtacacacct--taacctcttcagccatcggaatgtcttccacattctcgaaga-tccttgtagtccaactacgctaggaattttaggtagtt |
31423719 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||| | ||||| || |||||||| || |||||||| ||||||||||||||| |||| ||||||||||||||| |
|
|
T |
31423720 |
ctacaagactataccat-acttcttcaacacaagacatctcccgcttccttgaagatccacttgtgcccaatcacccttggc |
31423800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28997360 - 28997414
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacct |
56 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
28997360 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct |
28997414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29003076 - 29003130
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacct |
56 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
29003076 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct |
29003130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 776710 - 776667
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
776710 |
tctcccgcttccttgaagatcaccttgcatccaatcacccttgg |
776667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 28221583 - 28221626
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
28221583 |
tctcccgcttccttgaagatcaccttgcatccaatcacccttgg |
28221626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 50077420 - 50077534
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| ||||||||||| |||||| ||||||||||| |||||| ||||||||||| | ||||| | |||||||| |||| || || |||||||| |
|
|
T |
50077420 |
tcttccgtcttctcgaaga-tccttgtagtccaactacgctaggaattttaggtagttctacaagactataccataacctcttaaatacaggacatctcc |
50077518 |
T |
|
Q |
182 |
tgcttccttgaagatc |
197 |
Q |
|
|
||||||||||||||| |
|
|
T |
50077519 |
cgcttccttgaagatc |
50077534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 51752015 - 51751889
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || | |||| |||||||||||||||||| ||||||| ||||||||||| |||| | ||| ||||||| |
|
|
T |
51752015 |
tccacaagtttacacctcataaccccttcagccctcagaatgtcttccgccttctcgaag-gtccttgtagtccaactacgctagaaatttcaggtagtt |
51751917 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaa |
167 |
Q |
|
|
| ||||| | |||||||| ||||||| |
|
|
T |
51751916 |
ctacaagactataccataacctcttcaa |
51751889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 28221961 - 28221997
Alignment:
Q |
184 |
cttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |
|
|
T |
28221961 |
cttccttgaagatcaccttgcatccaatcacccttgg |
28221997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 16228128 - 16228022
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
16228128 |
aacctcttcagccatcggaatttcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataac |
16228030 |
T |
|
Q |
160 |
atcttcaa |
167 |
Q |
|
|
||||||| |
|
|
T |
16228029 |
ctcttcaa |
16228022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 31928726 - 31928788
Alignment:
Q |
102 |
tccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttc |
165 |
Q |
|
|
|||||||| |||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| |
|
|
T |
31928726 |
tccttgca-tccaactacactaggatttttaggtagttccacaagcctacaccataacctcttc |
31928788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 47179315 - 47179243
Alignment:
Q |
65 |
cttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt |
138 |
Q |
|
|
||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| |
|
|
T |
47179315 |
cttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt |
47179243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8954040 - 8953993
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagta |
49 |
Q |
|
|
|||||||||| |||||||||||||||| |||||| |||||||||||||| |
|
|
T |
8954040 |
atctacttgtgcccaatcacccttggc-ttttagggtaatccacaagta |
8953993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 50167881 - 50167924
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||||||||| ||||||||||||||||| |||||||| |
|
|
T |
50167881 |
tctcccgcttccttgaatatcaccttgcatccaataacccttgg |
50167924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 16430640 - 16430486
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
|||||||||| |||||| ||||| ||||| ||| | |||| ||||||||||||||||||| |||||| | | || |||||||||| ||| ||||||| |
|
|
T |
16430640 |
tccacaagtacacacct--taacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtatccaaattacactaggaatttcaggtagtt |
16430544 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatc |
197 |
Q |
|
|
| ||||| | |||||||| |||| || | ||||||||| |||||||||||||| |
|
|
T |
16430543 |
ctacaagactataccataacctctttaatacggaacatctccctcttccttgaagatc |
16430486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 19753677 - 19753623
Alignment:
Q |
111 |
tccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttc |
165 |
Q |
|
|
|||||||||||||||| ||||||||||| ||||||| | ||||||||| ||||| |
|
|
T |
19753677 |
tccaactacactaggatttttaggtagttacacaagcctacaccataacctcttc |
19753623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 8954083 - 8954014
Alignment:
Q |
152 |
accataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||||| ||||||| || ||||||||| ||||||||||||||| |||| ||||||||||||||| |
|
|
T |
8954083 |
accataacctcttcaatacagaacatctcccgcttccttgaagatctacttgtgcccaatcacccttggc |
8954014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 47)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 6064249 - 6064484
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| ||||||||||||||||||| |
|
|
T |
6064249 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagtcatcggaatgtcttccgccttctcgaaga |
6064345 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
6064346 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacgcagaacatctcctgcttccttgaagatcacc |
6064445 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
6064446 |
ttgcatccaatcacccttggcattcttttagagtaatct |
6064484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 457708 - 457474
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
457708 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaacacttcagccatcggaatatcttccgccttctcgaag- |
457613 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||||| |
|
|
T |
457612 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacacagaacatctcctacttccttgaagatcacc |
457513 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
457512 |
ttgcatccaatcacccttggcattcttttagagtaatct |
457474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10956805 - 10957038
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||| |
|
|
T |
10956805 |
atctacttgtacccaatcacccttgg-tttttagagtaatccacaagtatacacctc--aaccccttcagccatcggaatatcttccgccttctcgaag- |
10956900 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
T |
10956901 |
gtccttgcagtctaactacactaggagttttaggtagtcccacaagcattcaccacaacatcttcaacgcagaacatctcccgcttccttgaagatcacc |
10957000 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||||||||||| |||||||||| ||||| |
|
|
T |
10957001 |
ttgcatccaatcacccttggccttcttttagagtaatc |
10957038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 11169903 - 11169669
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||| ||| | ||| |||||| |||||||||||||||||| |
|
|
T |
11169903 |
atctacttgtagccaatcacccttggctttt-agagtaatccacaagtatacacttc--aacccctttagccatcggaatgtcttccgccttctcgaag- |
11169808 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| |
|
|
T |
11169807 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacacaaaacatctcccgcttccttgaagatcacc |
11169708 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
11169707 |
ttgcatccaatcacccttggcattcttttagagtaatct |
11169669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 5899216 - 5898980
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccac-ttcacccaccggaatatcttccgccttctcgaag |
99 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| | |||| || ||||||||||||||||||||||||| |
|
|
T |
5899216 |
atctacttgttcccaatcacccttggctttt-agagtaatccacaagtatacacct--taacccccttcagccctcggaatatcttccgccttctcgaag |
5899120 |
T |
|
Q |
100 |
agtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaag-atca |
198 |
Q |
|
|
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||| |||| |
|
|
T |
5899119 |
-gtccttgcagtccaactacgctaggaattttaggtagtcccacaagcattcaccataacatcttcagcgcaggacatcttctgcctccttgaagaatca |
5899021 |
T |
|
Q |
199 |
ccttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
5899020 |
ccttgcatccaatcacccttggcattcttttaggataatct |
5898980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 43227805 - 43227656
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
43227805 |
tcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcc |
43227706 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
43227705 |
cgcttccttgaagatcaccttgcatccaatcacccttggccttcttttag |
43227656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 43422209 - 43422435
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| | | |||| ||||||||||||||||| |
|
|
T |
43422209 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct--taaccccttcagctctcagaatgtcttccgccttctcgaat- |
43422304 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |
|
|
T |
43422305 |
gtccttgcagtccaactacgctagaaattttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcccgcttccttgaagatcacc |
43422404 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
| |||||||||||||||||||||| |||||| |
|
|
T |
43422405 |
tagcatccaatcacccttggcatttttttag |
43422435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 238
Target Start/End: Complemental strand, 42991746 - 42991567
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
42991746 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtactcccacaagcatttaccataa |
42991647 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
|||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||| |
|
|
T |
42991646 |
catcttcaacgcatgacatctcccgcttccttgaagatcaccttgtatccaatcacccttggcctttttttagagtaatc |
42991567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 4309022 - 4309184
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4309022 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
4309121 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
4309122 |
catcttcaatgcagaacatctcccgcttccttgaatatcaccttgcatccaatcacccttggc |
4309184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 53916412 - 53916645
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || | |||| |||||||||||||||||| |
|
|
T |
53916412 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct--taaccccttcagccctcagaatgtcttccgccttctcgaag- |
53916507 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||| |||||| ||||| ||||||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||||||| ||| |
|
|
T |
53916508 |
gtccttgcagtctaactacgctaggtattttaggtagttccacaagcattaaccataacctcttcaacacaggacatctcccgcttccttgaagattacc |
53916607 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||||| ||||| || |||||| |||||| |
|
|
T |
53916608 |
ttgcatccaatcaccgttggcctttttttaggataatc |
53916645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 35918713 - 35918869
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| |
|
|
T |
35918713 |
tcttccgtcttctcgaagagtccttgcagtccaactacactagaagttttaggtagtcccacacgcattcaccataacatcttcaatgcaggacatctcc |
35918812 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
T |
35918813 |
cacttccttgaagatcaccttgcatccaatcacccttggccttcttttagagtaatc |
35918869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 18097624 - 18097796
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
T |
18097624 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttatgtagttccacaagcattcaccataa |
18097723 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||| || |||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
T |
18097724 |
tatcttcaacacaggacatctcccgctcccttgaagatcgccttgcatccaatcacccttggccttcttttag |
18097796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 890643 - 890870
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccac-ttcacccaccggaatatcttccgccttctcgaag |
99 |
Q |
|
|
|||||||||| |||||||||||||| |||| ||||||||||||||||| |||||| ||||| | |||| ||| |||||| |||||||||||||||||| |
|
|
T |
890643 |
atctacttgtggccaatcacccttggatttt-agagtaatccacaagtaaacacct--taacccccttcagccatcggaatgtcttccgccttctcgaag |
890739 |
T |
|
Q |
100 |
agtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcac |
199 |
Q |
|
|
| ||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||| || | |||||| | || ||||||| || |
|
|
T |
890740 |
a-tccttgcagtcagactacgctaggaattttaggtagttccacaagcattcaccataacatctttaacacaggatatctcccgttttcttgaaggtctt |
890838 |
T |
|
Q |
200 |
cttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||||| |||||| || |||||| |
|
|
T |
890839 |
cttgcatccaatcactcttggcctttttttag |
890870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 28138033 - 28138205
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| |
|
|
T |
28138033 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagaatccttgcagtccaactacattaggtgttttaggtagtttcacaagcattcaccataa |
28138132 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
| |||||||| ||| |||||| | ||||||||||| || |||||| |||||||||||||||| || |||||| |
|
|
T |
28138133 |
cctcttcaacacatgacatcttccgcttccttgaaagtctccttgcttccaatcacccttggcctttttttag |
28138205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 35918575 - 35918702
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| |||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35918575 |
tccacaagtttacacctcttaacccattcagccctcggaatgtcttccgccttctcgaa-agtccttgcagtccaactacactaggagttttaggtagtc |
35918673 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaac |
168 |
Q |
|
|
||||||||||||||| |||| |||||||| |
|
|
T |
35918674 |
ccacaagcattcaccttaacctcttcaac |
35918702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 3316131 - 3315988
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| ||||||||||||||||||| ||| || ||||||||||| ||||||||||||||||||||||||||||| | | |
|
|
T |
3316131 |
cggaatgtcttccgccttctcgaag-gtccttgcagtccaactacgctaagaattttaggtagttccacaagcattcaccataacatcttcaacatagga |
3316033 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
||||||| ||||||||||| || ||||||| |||||||||||| |
|
|
T |
3316032 |
catctcccacttccttgaaggtcttcttgcattcaatcacccttg |
3315988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 28100825 - 28100972
Alignment:
Q |
84 |
ttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctg |
183 |
Q |
|
|
||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||| | |||||| | |
|
|
T |
28100825 |
ttccgtcttctcgaagagtccttacagtccaacgacactaggtgttttaggtagttccacaagcattcaccataacctcttcaacataggacatcttcca |
28100924 |
T |
|
Q |
184 |
cttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||| || ||||||||||||||||||||||| || |||||| |
|
|
T |
28100925 |
cttccttgaaagtctccttgcatccaatcacccttggcctttttttag |
28100972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 4308907 - 4309032
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || | |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
T |
4308907 |
tccacaagtttacacctcataaccccttcagccctcagaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggagttttaggtaatc |
4309005 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
4309006 |
ccacaagcattcaccttaacctcttca |
4309032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 43227943 - 43227820
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| | ||| ||||| || |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |
|
|
T |
43227943 |
tccacaagtttacacctcatgaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttagttagtt |
43227845 |
T |
|
Q |
140 |
ccacaagcattcaccataacatctt |
164 |
Q |
|
|
||||||||||||||| |||| |||| |
|
|
T |
43227844 |
ccacaagcattcaccttaacctctt |
43227820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 28100687 - 28100810
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| ||||||| ||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||| |||||||| || ||||||||||| |
|
|
T |
28100687 |
tccacaagtttacacct--taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccatctacactatgaattttaggtagtt |
28100783 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
28100784 |
ccacaagcattcaccttaacctcttca |
28100810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 42991861 - 42991736
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || || ||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
42991861 |
tccacaagtttacacctcttaaccccttcagccctcgaaatgtcttccgccttctcgaag-gtccttgtagtccaactacactaggaattttaggtagtt |
42991763 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||| ||||||||| |||| |||||| |
|
|
T |
42991762 |
ccacatgcattcaccttaacctcttca |
42991736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 18097511 - 18097634
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||| ||||| ||| |||||| |||||| ||||||||||| |||||||||||||||||| |||||| ||||||||||| |
|
|
T |
18097511 |
tccacaagtttacacctcc--accccttcagccatcggaatgtcttccaccttctcgaag-gtccttgcagtccaactaggctaggaattttaggtagtt |
18097607 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
18097608 |
ccacaagcattcaccttaacctcttca |
18097634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 28137920 - 28138043
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| ||||||| ||| | ||||| ||| |||||| |||||| ||||||| ||| |||||||||||||||||||||||| | ||||||||||| |
|
|
T |
28137920 |
tccacaagtttacacct--taatcccttcagccatcggaatgtcttcctccttctcaaag-gtccttgcagtccaactacactagaaattttaggtagtt |
28138016 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
28138017 |
ccacaagcattcaccttaacctcttca |
28138043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 6064114 - 6064275
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||||||||||||||||||||||| | |||| |||||||||||||||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
6064114 |
aacctcttcagccatcggaatatcttccgccttctcgaaga-tgcttgtagtccaactacactaggaatttcaggtagttctacaagactataccataac |
6064212 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | ||||||||||| ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
6064213 |
ctcttcaatacgagacatctcctgctttccttgaagatctacttgtacccaatcacccttggc |
6064275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 221
Target Start/End: Original strand, 53916294 - 53916438
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| ||||||||||||||||||| ||||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||| | |||||||| || | |
|
|
T |
53916294 |
cggaatgtcttccgccttctcgaaga-tccttatagtccaactacgctaggaatttcaggtagttctacaagactataccata-cttcttcaacacagga |
53916391 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
T |
53916392 |
catctcctgcttccttgaagatctacttgtgcccaatcacccttggc |
53916438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3306277 - 3306223
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacct |
56 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
3306277 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct |
3306223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 3306396 - 3306251
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| ||||||| | | |
|
|
T |
3306396 |
cggaatgtcttccgccttctcgaaga-tgcttgtagtccaactactctaggaatttcaggtagttctacaagactataccataacctcttcaatacgaga |
3306298 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| ||||||||||||||| |||| ||||||||||||||| |
|
|
T |
3306297 |
catctcccgcttccttgaagatctacttgtgcccaatcacccttggc |
3306251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 43422076 - 43422235
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| | |||| ||||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||| | ||||| | |||||| |
|
|
T |
43422076 |
taacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgt-gtccaactacactaggaatttcaggtagttctacaagactgtaccata- |
43422172 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| |||||||| ||| || | ||||||||||||||||||| |||| ||||||||||||||| |
|
|
T |
43422173 |
cttcttcaacacatgacttgtcctgcttccttgaagatctacttgtgcccaatcacccttggc |
43422235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 23636526 - 23636418
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||||| |||||| | |||||| |||||| ||| ||||||| |||| |||||||||||||| |
|
|
T |
23636526 |
taacctcttcagccatcggaatgtcttccgccttctcgaaga-tccttgtatcgaaactacgctaggaatttcaggtagttccactagcattcaccataa |
23636428 |
T |
|
Q |
159 |
catcttcaac |
168 |
Q |
|
|
| |||||||| |
|
|
T |
23636427 |
cctcttcaac |
23636418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 7607052 - 7607178
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| || ||||| ||||| ||||| ||| | |||| ||||||||||||||||||| |||||| ||||||||||| | |||| ||| ||||||| |
|
|
T |
7607052 |
tccacaagtttatacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgccaggaatttcaggtagtt |
7607150 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaa |
167 |
Q |
|
|
| ||||| | |||||||| ||||||| |
|
|
T |
7607151 |
ctacaagactataccataacctcttcaa |
7607178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 11170056 - 11169877
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| |||| ||||| ||| |||||| |||||||||||| ||||| | |||| ||||||||||| |||||| ||| ||||||| |
|
|
T |
11170056 |
tccacaagtttacacctc--aacctcttcagccatcggaatgtcttccgccttcatgaaga-tgcttgtagtccaactacgctaggaatttcaggtagtt |
11169960 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgctt-ccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||| | |||||||| ||||||| | |||||||| |||| ||||||||||| |||| | ||||||||||||||| |
|
|
T |
11169959 |
ctacaagactataccataacctcttcaataccagacatctcccgctttccttgaagatctacttgtagccaatcacccttggc |
11169877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 457828 - 457682
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| ||||||| | | |
|
|
T |
457828 |
cggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgaga |
457730 |
T |
|
Q |
175 |
catctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
457729 |
tatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
457682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 15824389 - 15824432
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
T |
15824389 |
tctcccgcttccttgaatatcaccttgcatccaatcacccttgg |
15824432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 29812510 - 29812463
Alignment:
Q |
173 |
aacatctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||||||| |||||||||||||||||||||||||| ||||| ||||| |
|
|
T |
29812510 |
aacatctcccgcttccttgaagatcaccttgcatccgatcacgcttgg |
29812463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 37407896 - 37407853
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
37407896 |
tctcccgcttccttgaagatcaccttgcatccgatcacccttgg |
37407853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 43402878 - 43402940
Alignment:
Q |
102 |
tccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttc |
165 |
Q |
|
|
|||||||| |||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| |
|
|
T |
43402878 |
tccttgca-tccaactacactaggatttttaggtagttccacaagcctacaccataacctcttc |
43402940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 10956686 - 10956830
Alignment:
Q |
76 |
ggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataac |
175 |
Q |
|
|
||||| ||||||||||||||||||| | |||| ||||||||||| ||| || ||| ||||||| | ||||| | |||||||| ||||||| | || |
|
|
T |
10956686 |
ggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctacgaatttcaggtagttctacaagactataccataacctcttcaatacgagac |
10956784 |
T |
|
Q |
176 |
atctcctgc-ttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
|||||| || ||||||||||||| |||| | |||||||||||||| |
|
|
T |
10956785 |
atctcccgctttccttgaagatctacttgtacccaatcacccttgg |
10956830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 10210837 - 10210793
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
T |
10210837 |
tctcccgcctccttgaagatcaccttgcatccgatcacccttggc |
10210793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 5258853 - 5258896
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
5258853 |
tctcccgcttcctcgaagatcaccttgcatccgatcacccttgg |
5258896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 4599219 - 4599292
Alignment:
Q |
149 |
ttcaccataacatcttcaacg-cataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | |||||||||| || ||| ||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
4599219 |
ttcaccaaaccatcttcaaccacagaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
4599292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 23635099 - 23635058
Alignment:
Q |
190 |
tgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||||||| ||||||||||||||||| || |||||| |
|
|
T |
23635099 |
tgaagatcaccttgtatccaatcacccttggcctttttttag |
23635058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 7763892 - 7763856
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatca |
213 |
Q |
|
|
||||| ||||||| ||||||||||||||||||||||| |
|
|
T |
7763892 |
tctcccgcttcctcgaagatcaccttgcatccaatca |
7763856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 10057884 - 10057840
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
10057884 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
10057840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 10060106 - 10060062
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
10060106 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
10060062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 10062328 - 10062284
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
10062328 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
10062284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 10064550 - 10064506
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
10064550 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
10064506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 10066772 - 10066728
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
10066772 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
10066728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 31156744 - 31156976
Alignment:
Q |
4 |
tacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtc |
103 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||| |||||||||||| |
|
|
T |
31156744 |
tacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccatcggaatatcttccgcactctcgaagagtc |
31156840 |
T |
|
Q |
104 |
cttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttg |
203 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
31156841 |
cttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatcttcaacgcagaacatctcctgcttccttgaagatcaccttg |
31156940 |
T |
|
Q |
204 |
catccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||||||||||||||||||||||| |||||| |
|
|
T |
31156941 |
catccaatcacccttggcattcttttagagtaatct |
31156976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1047745 - 1047979
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
1047745 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
1047840 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
T |
1047841 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcccgcttccttgaagatcacc |
1047940 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
1047941 |
ttgcatccaatcacccttggcattcttttagagtaatct |
1047979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 44071 - 43845
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
44071 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
43976 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
T |
43975 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcccgcttccttgaagatcacc |
43876 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||||||||||| ||||||||| |
|
|
T |
43875 |
ttgcatccaatcacccttggccttcttttag |
43845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 22136635 - 22136401
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
22136635 |
atctacttatacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaag- |
22136540 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| |
|
|
T |
22136539 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcaacgcagaacatcttccgcttccttgaagatcacc |
22136440 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
22136439 |
ttgcatccaatcacccttggcattcttttagagtaatct |
22136401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 40551662 - 40551428
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
40551662 |
atctacttatacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaag- |
40551567 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| |
|
|
T |
40551566 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcaacgcagaacatcttccgcttccttgaagatcacc |
40551467 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
40551466 |
ttgcatccaatcacccttggcattcttttagagtaatct |
40551428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 7350109 - 7350343
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || | ||||| || ||||| |||||||||||||||||| |
|
|
T |
7350109 |
atctacttgtacccaatcacccttgactttt-agagtaatccacaagtatacacctc--aatcccttcagcccttggaatgtcttccgccttctcgaag- |
7350204 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
T |
7350205 |
gtccttgcagtccaactacactagaagttttaggtagtcccacaagctttcaccataacatcttcaacacagaacatctcctgcttccttgaagatcacc |
7350304 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||| ||||| ||||||||||| |||||| |
|
|
T |
7350305 |
ttgcatccaatcactcttggtattcttttagagtaatct |
7350343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 20298757 - 20298585
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
20298757 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
20298658 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
T |
20298657 |
catcttcaacgcagaacatctcccgcttccttgaagatcaccttgcatccaatcactcttggccttcttttag |
20298585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 239
Target Start/End: Complemental strand, 28487042 - 28486862
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
T |
28487042 |
taacctcttcagccatcggaacgtcttccgtcttctctaagagtccttgcggtccaactacaccaggagttttaggtagtcccacaagcattcaccaaaa |
28486943 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
28486942 |
catcttcaacgcagaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggccttcttttagagtaatct |
28486862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 238
Target Start/End: Original strand, 7092971 - 7093150
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
7092971 |
taacctcttcagccatcggaacgtcttcggtcttctcgaagagtccttgcagtccaactacactaggatttttaggtagtcccacaagcattcaccataa |
7093070 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||| ||||| |
|
|
T |
7093071 |
catcttcaacgcaggacatctcccacttccttgaaggtcaccttgcatccaatcacccttggcctccttttagagtaatc |
7093150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 9680206 - 9679980
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| || || ||| |||||| ||||||||||| |
|
|
T |
9680206 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaagtatacacct--taaccccttcggccctcgtaatgtcttccaccttctcgaag- |
9680111 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||| ||||| |||| | ||||||||||| |||||||||||||||||||||| |||||| ||| |||||||| |||||||||||| || || |
|
|
T |
9680110 |
gtccttgcagtcagactacgctagaaattttaggtagttccacaagcattcaccataacatgttcaacacatgacatctcccgcttccttgaaggtctcc |
9680011 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||||||||||||| || |||||| |
|
|
T |
9680010 |
atgcatccaatcacccttggcctttttttag |
9679980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 86 - 231
Target Start/End: Complemental strand, 21679528 - 21679383
Alignment:
Q |
86 |
ccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgct |
185 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||| || ||||||| | ||| |
|
|
T |
21679528 |
ccgccttctcgaagagtccttgcagtccaactacactaggaattttatgtagttcgacaagcattcaccataacatcttcaacacagaacatcttccgct |
21679429 |
T |
|
Q |
186 |
tccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||| |||||||||||||||||||||||||| || |||||| |
|
|
T |
21679428 |
tccttgaaggtcaccttgcatccaatcacccttggcctttttttag |
21679383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 7470827 - 7470999
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| |||||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
T |
7470827 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcacttcaactatgctaggaattttaggtagtcccacaagcattcaccataa |
7470926 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
T |
7470927 |
catcttcaacacaggacatctcctgctcccttgaagatcactttgcatccaatcacccttggacttcttttag |
7470999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 44726399 - 44726256
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || | |
|
|
T |
44726399 |
cggaatgtcttccgccttctcgaag-gtcattgcagtccaactacactaggaattttaggtagttccacaagcattcaccataacatcttcaacacagga |
44726301 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
||||||| |||||||||||| || ||||||||||||||||||||| |
|
|
T |
44726300 |
catctcccgcttccttgaaggtctccttgcatccaatcacccttg |
44726256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 38395747 - 38395609
Alignment:
Q |
90 |
cttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttcct |
189 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||| |
|
|
T |
38395747 |
cttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc---acatcttcaacacatgacatctcccgcttcct |
38395651 |
T |
|
Q |
190 |
tgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||| || ||||||||||||||| |||||| || |||||| |
|
|
T |
38395650 |
tgaaggtctccttgcatccaatcatgcttggcctttttttag |
38395609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 38395891 - 38395768
Alignment:
Q |
42 |
cacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtccc |
141 |
Q |
|
|
||||||| |||||||| ||||| |||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38395891 |
cacaagtttacacctcataaccctttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggagttttaggtagtccc |
38395793 |
T |
|
Q |
142 |
acaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||| |||| |||||| |
|
|
T |
38395792 |
acaagcattcaccttaacctcttca |
38395768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 20298854 - 20298747
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
T |
20298854 |
taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccttaa |
20298755 |
T |
|
Q |
159 |
catcttca |
166 |
Q |
|
|
| |||||| |
|
|
T |
20298754 |
cctcttca |
20298747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 7470712 - 7470837
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| || || ||||| || |||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
T |
7470712 |
tccacaagtttacacctcatagccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacattaggaattttaggtagta |
7470810 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
7470811 |
ccacaagcattcaccttaacctcttca |
7470837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 28487157 - 28487032
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| |||| ||||| ||| |||||||| |||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||| |
|
|
T |
28487157 |
tccacaagtttacacctctaaaccccttcagccatcggaatattttccgccttctcgaag-gtccttgtagtccaactacgctaggaattttaggtagtt |
28487059 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
28487058 |
ccacaagcattcaccttaacctcttca |
28487032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 20298934 - 20298844
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttca |
166 |
Q |
|
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| |
|
|
T |
20298934 |
cggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccttaacctcttca |
20298844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 7092856 - 7092981
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| | | |||| |||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||| |
|
|
T |
7092856 |
tccacaagtttacacctcataaccccttcagctctcagaatgtcttccgccttctcgaag-gtccttgtagtccaactacgctaggaattttaggtagtt |
7092954 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
7092955 |
ccacaagcattcaccttaacctcttca |
7092981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 21679651 - 21679546
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||| | |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||| ||| |
|
|
T |
21679651 |
taaccccttcagccatcggattgtcttccgccttctcgaag-gtccttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccttaa |
21679553 |
T |
|
Q |
159 |
catcttc |
165 |
Q |
|
|
| ||||| |
|
|
T |
21679552 |
cctcttc |
21679546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 24815808 - 24815985
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
|||||||||| |||||| ||||| ||||| ||| |||||| | |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||| |
|
|
T |
24815808 |
tccacaagtacacacct--taacctcttcagccatcggaatgtattccgccttctcgaag-gtccttgcac-ccaactacactaggaattttaggtagtt |
24815903 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||| |||||| ||||| |||||||| | | | |||| |||||| |||||||| |||| |||||||||| ||||||| |
|
|
T |
24815904 |
ctacaagtattcacaataacgtcttcaacacgggataactcccgcttccatgaagatctcctttcatccaatcaaccttggc |
24815985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 7349974 - 7350133
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||||||||||| | ||||| | |||||||| |
|
|
T |
7349974 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaattttaggtagttctacaagactataccataac |
7350072 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||| |
|
|
T |
7350073 |
ctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttg |
7350133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 1047609 - 1047771
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | ||||||| |
|
|
T |
1047609 |
taacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataa |
1047707 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
1047708 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
1047771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 22136770 - 22136664
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
22136770 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataac |
22136672 |
T |
|
Q |
160 |
atcttcaa |
167 |
Q |
|
|
||||||| |
|
|
T |
22136671 |
ctcttcaa |
22136664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 40551797 - 40551691
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
40551797 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataac |
40551699 |
T |
|
Q |
160 |
atcttcaa |
167 |
Q |
|
|
||||||| |
|
|
T |
40551698 |
ctcttcaa |
40551691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 48491042 - 48490999
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
T |
48491042 |
tctcccgcttctttgaagatcaccttgcatccaatcacccttgg |
48490999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 4509673 - 4509753
Alignment:
Q |
83 |
cttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttc |
165 |
Q |
|
|
|||||||||||| |||| |||||||| |||||||||||||||| |||||| |||| |||||||| | ||||||||| ||||| |
|
|
T |
4509673 |
cttccgccttcttgaagt-tccttgca-tccaactacactaggatttttagatagttccacaagcctacaccataacctcttc |
4509753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 4511515 - 4511595
Alignment:
Q |
83 |
cttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttc |
165 |
Q |
|
|
|||||||||||| |||| |||||||| |||||||||||||||| |||||| |||| |||||||| | ||||||||| ||||| |
|
|
T |
4511515 |
cttccgccttcttgaagt-tccttgca-tccaactacactaggatttttagatagttccacaagcctacaccataacctcttc |
4511595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 47674669 - 47674711
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
||||| |||||||||||||||||||||||||| |||||||||| |
|
|
T |
47674669 |
tctcccgcttccttgaagatcaccttgcatccgatcacccttg |
47674711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 31156621 - 31156712
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaa |
167 |
Q |
|
|
|||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| ||||||| |
|
|
T |
31156621 |
cggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaa |
31156712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 6593062 - 6593106
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
6593062 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
6593106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 33310711 - 33310477
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
33310711 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaag- |
33310616 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
33310615 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccatcttcaacgcagaacatctcctgcttccttgaagatcacc |
33310516 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
33310515 |
ttgcatccaatcacccttggcattcttttagagtaatct |
33310477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 26066854 - 26067087
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||| |||||| ||||||| |||||||||| |
|
|
T |
26066854 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccatcggaatgtcttccgtcttctcgaag- |
26066949 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
26066950 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcaacgcagaacatctcctgcttccttgaagatcacc |
26067049 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
|||||||||||||| ||||||||||||||||| ||||| |
|
|
T |
26067050 |
ttgcatccaatcactcttggcattcttttagagtaatc |
26067087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 3630662 - 3630878
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| || || ||| |||||||||||||||||| |
|
|
T |
3630662 |
atctacttgtgcccaatcacccttggctttt-agagtaatccacaactatacacct--taaccccttcagccctcgaaatgtcttccgccttctcgaag- |
3630757 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| || || |
|
|
T |
3630758 |
gtccttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccataacatcttcaacacaggacatatcccgcttccttgaaggtctcc |
3630857 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||||||||||||||||| |
|
|
T |
3630858 |
ttgcatccaatcacccttggc |
3630878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3395853 - 3395639
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
3395853 |
atctactaatacccaatcacccttggctttt-agagtaatccacaagtatacacct--taaccccttcagccctcggaatgtcttccgccttctcgaag- |
3395758 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||||||||||| || |||||||| |||||||||||| || | |
|
|
T |
3395757 |
gtccttgcagtccaactacaataggaattttaggtagttccacaaacattcaccataacatcttcaacacaggacatctcccgcttccttgaaggtcttc |
3395658 |
T |
|
Q |
201 |
ttgcatccaatcacccttg |
219 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
3395657 |
ttgcatccaatcacccttg |
3395639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 15533450 - 15533600
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| |
|
|
T |
15533450 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccatgacatcttcaacacaagacatctcc |
15533549 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatcc-aatcacccttggcattcttttag |
231 |
Q |
|
|
|||||||||||| || |||||||||| ||||||||||||| || |||||| |
|
|
T |
15533550 |
cgcttccttgaaggtctccttgcatccaaatcacccttggcctttttttag |
15533600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 59 - 219
Target Start/End: Original strand, 30729457 - 30729616
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
T |
30729457 |
taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttacacaagcattcaccataa |
30729555 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttg |
219 |
Q |
|
|
|||||| ||| || || ||||| |||||||||||||| |||||||||||||||||||||| |
|
|
T |
30729556 |
catctttaacacaggacgtctcccgcttccttgaagattaccttgcatccaatcacccttg |
30729616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 15533332 - 15533437
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| | |||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||| ||||||| | |||| |
|
|
T |
15533332 |
aaccccttcagccatcagaatgtcttccgccttctcgaag-gtccttgcagtccaactacacttggaattttaggtagttccacaggcattcaacttaac |
15533430 |
T |
|
Q |
160 |
atcttca |
166 |
Q |
|
|
|||||| |
|
|
T |
15533431 |
ctcttca |
15533437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 221
Target Start/End: Original strand, 3630543 - 3630688
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||| |||| |||||| ||| |||||||||||||| ||| ||||||| | ||||| | | |||||||||||||| | | | |
|
|
T |
3630543 |
cggaatgtcttccgccttctcaaaga-tccttgtagttcaactacactaggaatttcaggtagttctacaagactataacataacatcttcaatacgtga |
3630641 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| ||||||||||||||| |||| ||||||||||||||| |
|
|
T |
3630642 |
catctcccgcttccttgaagatctacttgtgcccaatcacccttggc |
3630688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 26944794 - 26944710
Alignment:
Q |
83 |
cttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaac |
168 |
Q |
|
|
|||||||||| |||||| |||||||||||||||||| |||||| ||||||||||| ||||||| || ||||||||| |||||||| |
|
|
T |
26944794 |
cttccgccttttcgaag-gtccttgcagtccaactatgctaggaattttaggtagttccacaagtatccaccataacctcttcaac |
26944710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 33310846 - 33310685
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
33310846 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataac |
33310748 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
33310747 |
ctcttcaatacgagatatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
33310685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 26066719 - 26066880
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| |||||| |||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
26066719 |
aacctcttcagccatcggaatgtcttcctccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataac |
26066817 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
|||| || | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
26066818 |
ctctttaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
26066880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 3395989 - 3395882
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||| ||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | ||||||| |
|
|
T |
3395989 |
taacctcttcagccatcggaatgtcttctgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataa |
3395891 |
T |
|
Q |
159 |
catcttcaa |
167 |
Q |
|
|
| ||||||| |
|
|
T |
3395890 |
cctcttcaa |
3395882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 11137892 - 11137783
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagag--tccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccata |
157 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||| ||||||| | ||||||| |
|
|
T |
11137892 |
aacctcttcaaccatcggaatgccttccgccttcatgaagaccatccttgca-tccaactacactaggaattttaggtagttccacaagtctacaccata |
11137794 |
T |
|
Q |
158 |
acatcttcaac |
168 |
Q |
|
|
|| ||||||| |
|
|
T |
11137793 |
accacttcaac |
11137783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 34166523 - 34166479
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || |||| |||||||||||||||||| |||||||||||| |
|
|
T |
34166523 |
tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc |
34166479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 35216426 - 35216660
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
35216426 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
35216521 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
T |
35216522 |
gtccttgcagtccaactacactaggagtttcaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcctgcttcattgaagatcacc |
35216621 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35216622 |
ttgcatccaatcacccttggcattcttttagaataatct |
35216660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 19502792 - 19503026
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| ||||||||||||| |||| |
|
|
T |
19502792 |
atctacttatacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttcttgaag- |
19502887 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
T |
19502888 |
gttcttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcagaacatctcctgcttccttgaagatcatc |
19502987 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
19502988 |
ttgcatccaatcacccttggcattcttttagagtaatct |
19503026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 36559601 - 36559835
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
36559601 |
atctacttgtacccaatcacccttggctttc-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaag- |
36559696 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| |
|
|
T |
36559697 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcaacgcagaacatcttccgcttccttgaagatcacc |
36559796 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
36559797 |
ttgcatccaatcacccttggcattcttttagagtaatct |
36559835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 21519181 - 21519321
Alignment:
Q |
90 |
cttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttcct |
189 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||| |
|
|
T |
21519181 |
cttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcccgcttcct |
21519280 |
T |
|
Q |
190 |
tgaagatcaccttgcatccaatcacccttggcattctttta |
230 |
Q |
|
|
||||| || ||||||||||||||||||||||| || ||||| |
|
|
T |
21519281 |
tgaaggtctccttgcatccaatcacccttggccttttttta |
21519321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31733620 - 31733836
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||| |||| |||||||||||||||||||| || ||||||||||| |||||| || |||| ||| | ||| |||||| |||||| ||||||| ||| |
|
|
T |
31733620 |
atctatttgtgcccaatcacccttggctttt-agggtaatccacaa--atacacatcttaacttctttagccatcggaatgtcttcctccttctcaaag- |
31733715 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||| |||| | ||| ||||||| ||||||| || |||||||| ||||| ||| || |||||||| ||||||||||||||| || |
|
|
T |
31733716 |
gtccttgcagtccaactacgctagaaatttgaggtagttccacaagtatccaccataaaatctttaacacaggacatctcccgcttccttgaagatctcc |
31733815 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||||||||||| ||||| |
|
|
T |
31733816 |
ttgcatccaatcacctttggc |
31733836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 6263002 - 6263119
Alignment:
Q |
114 |
aactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatca |
213 |
Q |
|
|
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||||||| |
|
|
T |
6263002 |
aactacgctaggagttttaggtagttccacaagcattcaccataacatcttcaacacaggatatctcccgcttccttgaagatcaccttgcatccaatca |
6263101 |
T |
|
Q |
214 |
cccttggcattcttttag |
231 |
Q |
|
|
| |||||| || |||||| |
|
|
T |
6263102 |
cacttggcctttttttag |
6263119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 21519054 - 21519158
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |
|
|
T |
21519054 |
taaccccttcagccatcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccttaa |
21519152 |
T |
|
Q |
159 |
catctt |
164 |
Q |
|
|
| |||| |
|
|
T |
21519153 |
cctctt |
21519158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 22405147 - 22405255
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
T |
22405147 |
taacctcttcagccatcggaatggcttccgccttctcgaaga-tccttgaagtccaactacactaggaattttaggtagttccacaagcattcaccataa |
22405245 |
T |
|
Q |
159 |
catcttcaac |
168 |
Q |
|
|
|||||||||| |
|
|
T |
22405246 |
catcttcaac |
22405255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 218
Target Start/End: Original strand, 13828965 - 13829105
Alignment:
Q |
77 |
gaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacg-cataac |
175 |
Q |
|
|
|||| ||||||||||||| ||||| || ||||| |||||||||||||| | |||||| |||| ||||||| || ||||||||| |||||||| | ||| |
|
|
T |
13828965 |
gaatgtcttccgccttcttgaagattc-ttgca-tccaactacactagaaattttagttagttccacaagtatacaccataacctcttcaaccacggaac |
13829062 |
T |
|
Q |
176 |
atctcctgcttccttgaagatcaccttgcatccaatcaccctt |
218 |
Q |
|
|
|||||||||||||||||||||| |||| |||||||||||||| |
|
|
T |
13829063 |
atctcctgcttccttgaagatcttcttgtatccaatcaccctt |
13829105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 6259708 - 6259808
Alignment:
Q |
14 |
caatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtcc |
113 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| || ||||||||||||| ||||||||||| ||||||||||||| |
|
|
T |
6259708 |
caatcacccttggctttt-agagtaatccacaagtacgcacct--taaccccttcagccctcggaatatcttccaccttctcgaag-gtccttgcagtcc |
6259803 |
T |
|
Q |
114 |
aacta |
118 |
Q |
|
|
||||| |
|
|
T |
6259804 |
aacta |
6259808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 36559466 - 36559627
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataac |
159 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| |||||||||||||||||| ||| ||||||| | ||||| | |||||||| |
|
|
T |
36559466 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacactaggaatttcaggtagttctacaagactataccataac |
36559564 |
T |
|
Q |
160 |
atcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | | |||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
36559565 |
ctcttcaatacgagatatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
36559627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 14634529 - 14634572
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
14634529 |
tctcccgcttccttgaagatcaccttgcatccaatcacccttgg |
14634572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 19502656 - 19502818
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||||||| |||||| | ||||| | ||||||| |
|
|
T |
19502656 |
taacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggagtttcaggtagctctacaagactataccataa |
19502754 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| ||| | ||||||||||||||| |
|
|
T |
19502755 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttatacccaatcacccttggc |
19502818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 197
Target Start/End: Original strand, 31733468 - 31733622
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
|||||||||| |||||| ||||| ||| | ||| |||||| ||||| ||||||||||||| ||||| | | ||||||||||||| ||| ||||||| |
|
|
T |
31733468 |
tccacaagtacacacct--taacctctttagccatcggaatgtcttctgccttctcgaagaa-ccttgtatccaaactacactaggaatttcaggtagtt |
31733564 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatc |
197 |
Q |
|
|
| ||||| | | |||||| ||||||| || ||||||||| ||||||||||||||| |
|
|
T |
31733565 |
ctacaagactatatcataacctcttcaatacagaacatctcccgcttccttgaagatc |
31733622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 22405281 - 22405321
Alignment:
Q |
15 |
aatcacccttggctttttagagtaatccacaagtatacacct |
56 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
22405281 |
aatcacccttggctttt-agagtaatccacaagtatacacct |
22405321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 35216308 - 35216452
Alignment:
Q |
77 |
gaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataaca |
176 |
Q |
|
|
|||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| ||||||| | | | |
|
|
T |
35216308 |
gaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagata |
35216406 |
T |
|
Q |
177 |
tctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
35216407 |
tctcccgctttccttgaagatctacttgtacccaatcacccttggc |
35216452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 6259561 - 6259694
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| | |||| ||||||||||||||||||| |||||| | | ||||||||||||| ||| ||||||| | ||||| | ||||| | |
|
|
T |
6259561 |
taacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtatccaaactacactaggaatttcaggtagttctacaagactataccat-a |
6259658 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaag |
194 |
Q |
|
|
| |||||||| || |||||||| |||||||||||| |
|
|
T |
6259659 |
cttcttcaacacaggacatctcccgcttccttgaag |
6259694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 43081479 - 43081245
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||| | ||||||||||||||||||||||| |
|
|
T |
43081479 |
atctacttgtacccaatcacccttggctttt-agagtaatcaacaagtatacacctc--aaccacttcagccatcagaatatcttccgccttctcgaag- |
43081384 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
T |
43081383 |
gtccttgcagtccaactacactaggagttttaggtagacccacaagctttcaccataacatcttcaacacagaacatctcctgcttccttgaagatcacc |
43081284 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
43081283 |
ttgcatccaatcacccttggcattcttttagagtaatct |
43081245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 27828849 - 27828629
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| || |||||| ||||| |||||||||||| |
|
|
T |
27828849 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctcataaccccttcagccctcggaatgtcttctgccttctcgaag- |
27828752 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |
|
|
T |
27828751 |
gtccttgtagtccaactacactaggaattttaggtagtcccacaagcatttaccataacatctt----------------ccgcttccttgaagatcacc |
27828668 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
T |
27828667 |
ttgcatccaatcacccttggcattcttttagagtaatct |
27828629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 15072276 - 15072127
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||| |
|
|
T |
15072276 |
tcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttctacaagcattcaccataacatcttcaacacaggacatctcc |
15072177 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||||||||| || ||||||||||||||||||||||| || |||||| |
|
|
T |
15072176 |
tgcttccttgaaggtctccttgcatccaatcacccttggcctttttttag |
15072127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 41384248 - 41384022
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
|||||||||| |||||||| |||||| |||| ||||||||||||||||||||||||| |||| ||||| | | |||| |||||||||||||||||| |
|
|
T |
41384248 |
atctacttgtgcccaatcatccttggatttt-agagtaatccacaagtatacacctc--aaccccttcagtcctcagaatgtcttccgccttctcgaag- |
41384153 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||| |||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||| |
|
|
T |
41384152 |
gtccttgaagtctaactacgctaggtattttaggtagttccacaagcattcaccataacatcttcaacacaggacatctcccgcttccttgaaggtcacc |
41384053 |
T |
|
Q |
201 |
ttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||| ||| ||||||||| || |||||| |
|
|
T |
41384052 |
ttgcatcaaataacccttggcctttttttag |
41384022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 15072395 - 15072289
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |
|
|
T |
15072395 |
taaccccttcagccatcggaatatcttccgtcttctcgaag-gtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccttaa |
15072297 |
T |
|
Q |
159 |
catcttca |
166 |
Q |
|
|
| |||||| |
|
|
T |
15072296 |
cctcttca |
15072289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 27829004 - 27828823
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| ||| |||||| ||||||||||||||||||| |||||| ||||||||||| |||||| ||| ||||||| |
|
|
T |
27829004 |
tccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcaggtagtt |
27828906 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttcaacgcataacatctcctgctt-ccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||| | |||||||| ||||||| | ||||||||| |||| |||||||||| |||| | ||||||||||||||| |
|
|
T |
27828905 |
ctacaagactataccataacctcttcaatacgaaacatctcccgcttaacttgaagatctacttgtacccaatcacccttggc |
27828823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 21481949 - 21481856
Alignment:
Q |
128 |
ttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||||||| || |||| || ||||||||| |||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
21481949 |
ttttaggtagttccgcaagtatccaccataacctcttcaacacaggacatctcccgcttccttgaagatctccttgcatccaatcacccttggc |
21481856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18812426 - 18812371
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctc |
57 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
18812426 |
atctacttgtacccaatcacccttggc-ttttagagtaatccacaagtatacacctc |
18812371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 17849416 - 17849263
Alignment:
Q |
65 |
cttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatctt |
164 |
Q |
|
|
||||| ||| |||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||| ||||||| | ||||| | | |||| |
|
|
T |
17849416 |
cttcaaccatcggaatgccttccgccttcttgaaga-tccttgca-tccaactacactaggaattttaggtagttccacaagtctacaccaaaccctctt |
17849319 |
T |
|
Q |
165 |
caacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
|||| ||| |||| |||||||||||||||||||| ||||||||| |||||| |
|
|
T |
17849318 |
caaccactaaagtctcacacttccttgaagatcaccttgtatccaatcatccttgg |
17849263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 31574411 - 31574521
Alignment:
Q |
111 |
tccaactacactaggagttttaggtagtcccacaagcattcaccataaca-tcttcaacgcata-acatctcctgcttccttgaagatcaccttgcatcc |
208 |
Q |
|
|
|||||||||||||||| ||||||||||| || |||| || ||||||||| |||||||| | || ||||||||||||||||||||| |||||||||| |
|
|
T |
31574411 |
tccaactacactaggaattttaggtagttccgcaagtatacaccataaccctcttcaaccacgagacgtctcctgcttccttgaagatctccttgcatcc |
31574510 |
T |
|
Q |
209 |
aatcacccttg |
219 |
Q |
|
|
||||||||||| |
|
|
T |
31574511 |
aatcacccttg |
31574521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 4733268 - 4733225
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
4733268 |
tctcccgcttccttgaagatcaccttgcatccgatcacccttgg |
4733225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 41365542 - 41365589
Alignment:
Q |
173 |
aacatctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
|||||||||||||||||||||||||| | ||||||||||||| ||||| |
|
|
T |
41365542 |
aacatctcctgcttccttgaagatcatcgtgcatccaatcactcttgg |
41365589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 43081599 - 43081453
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | |||||||| ||||||| | | |
|
|
T |
43081599 |
cggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgaga |
43081501 |
T |
|
Q |
175 |
catctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
43081500 |
tatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
43081453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34255036 - 34255079
Alignment:
Q |
177 |
tctcctgcttccttgaagatcaccttgcatccaatcacccttgg |
220 |
Q |
|
|
||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
34255036 |
tctcccgcttcctcgaagatcaccttgcatccgatcacccttgg |
34255079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 197
Target Start/End: Complemental strand, 41384383 - 41384246
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| |||||| ||||||||||||||||||| | ||| ||||||||||| |||| | ||| ||||||| | ||||| | ||||||| |
|
|
T |
41384383 |
taacctcttcagccatcggaatgtcttccgccttctcgaaga-tgtttgtagtccaactacgctagaaatttcaggtagttctacaagactataccataa |
41384285 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatc |
197 |
Q |
|
|
| ||||||| | |||| ||| ||||||||||||||| |
|
|
T |
41384284 |
cctcttcaatacgagacatatcccgcttccttgaagatc |
41384246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 23946 - 23730
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaaga |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
T |
23946 |
atctacttgtacccaatcacccttggctttt-agagtaatccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaag- |
23851 |
T |
|
Q |
101 |
gtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcctgcttccttgaagatcacc |
200 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||| |||||||||||||||||| |
|
|
T |
23850 |
gtccttgtagtccaactacactaggagttttaggtagtcccacaagcattcaccataccgtcttcagcgcagaacatctcccgcttccttgaagatcacc |
23751 |
T |
|
Q |
201 |
ttgcatccaatcacccttggc |
221 |
Q |
|
|
|||||||||||||| |||||| |
|
|
T |
23750 |
ttgcatccaatcactcttggc |
23730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 24082 - 23920
Alignment:
Q |
60 |
aaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaag-cattcaccataa |
158 |
Q |
|
|
|||| ||||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||| | ||||| | | ||||||| |
|
|
T |
24082 |
aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaagacttataccataa |
23984 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgc-ttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
| ||||||| | |||||||| || ||||||||||||| |||| | ||||||||||||||| |
|
|
T |
23983 |
cctcttcaatacgagacatctcccgctttccttgaagatctacttgtacccaatcacccttggc |
23920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1674 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold1674
Description:
Target: scaffold1674; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 298 - 478
Alignment:
Q |
59 |
taaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa |
158 |
Q |
|
|
||||| ||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |
|
|
T |
298 |
taacctcttcagccatcggaacgtcttccgacttctcgaagagtccttgcagtccaactacgctaggaattttaggtagtcccacttgcattcaccataa |
397 |
T |
|
Q |
159 |
catcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||||| |
|
|
T |
398 |
catcttcaatgcagaacatctcccgcttccttgaagaccaccttgcatccaatcaccattggccttcttttagagtaatct |
478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1674; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 185 - 308
Alignment:
Q |
42 |
cacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtccc |
141 |
Q |
|
|
||||||| |||||| | ||||| ||||| || |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
185 |
cacaagtttacaccccataaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgtagtccaactacactaggagttttaggtagtccc |
283 |
T |
|
Q |
142 |
acaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||| |||| |||||| |
|
|
T |
284 |
acaagcattcaccttaacctcttca |
308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 70061 - 70217
Alignment:
Q |
82 |
tcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataacatctcc |
181 |
Q |
|
|
||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
T |
70061 |
tcttccgtcttctcgaagagtacttgcagtccaactacgctaggaattttaggtagtcccacaagcattcaccataacatcttcaatgcaggacatctcc |
70160 |
T |
|
Q |
182 |
tgcttccttgaagatcaccttgcatccaatcacccttggcattcttttagaataatc |
238 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||| |||||||||| ||||| |
|
|
T |
70161 |
cgcttccttgaaggtcaccttgcatccaatcacccttggccttcttttagagtaatc |
70217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 69922 - 70048
Alignment:
Q |
40 |
tccacaagtatacacctcgtaaccacttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc |
139 |
Q |
|
|
||||||||| |||||||| ||||| ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
T |
69922 |
tccacaagtttacacctcataaccccttcagccctcggaatgtcttccgccttctcgaaaggtccttgcagtccaactacactaggaattttaggtagct |
70021 |
T |
|
Q |
140 |
ccacaagcattcaccataacatcttca |
166 |
Q |
|
|
||||||||||||||| |||| |||||| |
|
|
T |
70022 |
ccacaagcattcaccttaacctcttca |
70048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 75 - 231
Target Start/End: Complemental strand, 51488 - 51333
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || | |
|
|
T |
51488 |
cggaatgtcttccgccttctcgaag-gtccttgcagtccatctacactaggaattttaggtagttccacaagcattcaccataacatcttcaacacagga |
51390 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggcattcttttag |
231 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
T |
51389 |
catctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttttttag |
51333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 35365 - 35220
Alignment:
Q |
75 |
cggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatcttcaacgcataa |
174 |
Q |
|
|
|||||| |||||||||||||||||| ||||||| |||| |||||| ||||| ||||||||||| |||||||||||||||||||| |||||||| || | |
|
|
T |
35365 |
cggaatgtcttccgccttctcgaag-gtccttgtagtctaactacgctaggtattttaggtagttccacaagcattcaccataacctcttcaacacagga |
35267 |
T |
|
Q |
175 |
catctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
||||||| | |||||||||| || ||||||||||||||||||||||| |
|
|
T |
35266 |
catctcccgtttccttgaaggtctccttgcatccaatcacccttggc |
35220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 4269 - 4107
Alignment:
Q |
65 |
cttcacccaccggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtccca-------caagcattcaccata |
157 |
Q |
|
|
||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||| |||| || ||||||| |
|
|
T |
4269 |
cttcagccaacggaatgtcttccgccttctcgaagag-ccttgcagtccaactacactagaaattttaggtagttccatattccacaagtatccaccata |
4171 |
T |
|
Q |
158 |
acatcttcaacgcataacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc |
221 |
Q |
|
|
|| |||||||| || |||||||| ||||||||||||||| |||| |||||||||||||||||| |
|
|
T |
4170 |
acctcttcaacacaggacatctcccgcttccttgaagatctccttacatccaatcacccttggc |
4107 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 4346 - 4293
Alignment:
Q |
84 |
ttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt |
138 |
Q |
|
|
||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||| |
|
|
T |
4346 |
ttccgacttctcgaag-gtccttgcagtccaactacactaggaatttgaggtagt |
4293 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 189206 - 189151
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtatacacctc |
57 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
189206 |
atctacttgtacccaatcacccttggc-ttttagagtaatccacaagtatacacctc |
189151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0250 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0250
Description:
Target: scaffold0250; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2397 - 2348
Alignment:
Q |
1 |
atctacttgtacccaatcacccttggctttttagagtaatccacaagtata |
51 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
2397 |
atctacttgtacccaatcacccttggc-ttttagagtaatccacaagtata |
2348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1899 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1899
Description:
Target: scaffold1899; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 1256 - 1213
Alignment:
Q |
196 |
tcaccttgcatccaatcacccttggcattcttttagaataatct |
239 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
1256 |
tcaccttgcatccaatcacccttggccttcttttagagtaatct |
1213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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