View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1566_high_3 (Length: 582)

Name: NF1566_high_3
Description: NF1566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1566_high_3
NF1566_high_3
[»] chr8 (57 HSPs)
chr8 (73-437)||(39889838-39890197)
chr8 (1-116)||(39890197-39890312)
chr8 (183-354)||(30539132-30539304)
chr8 (248-355)||(16982751-16982857)
chr8 (183-353)||(6807311-6807480)
chr8 (185-354)||(29657702-29657877)
chr8 (248-355)||(3676268-3676375)
chr8 (248-339)||(37813247-37813338)
chr8 (183-355)||(23702275-23702448)
chr8 (248-351)||(21486721-21486824)
chr8 (183-355)||(45177201-45177375)
chr8 (186-345)||(41487360-41487520)
chr8 (185-344)||(26823828-26823989)
chr8 (183-345)||(32071165-32071325)
chr8 (379-437)||(41487268-41487326)
chr8 (376-437)||(45177393-45177454)
chr8 (263-355)||(25144024-25144116)
chr8 (522-562)||(39888411-39888451)
chr8 (264-355)||(29044687-29044778)
chr8 (248-343)||(41567087-41567182)
chr8 (376-437)||(30539056-30539117)
chr8 (185-310)||(42218429-42218555)
chr8 (183-230)||(36688263-36688311)
chr8 (183-354)||(20853378-20853549)
chr8 (186-232)||(25896993-25897040)
chr8 (263-354)||(27545422-27545512)
chr8 (248-354)||(22192439-22192545)
chr8 (264-354)||(22846526-22846616)
chr8 (264-353)||(33298422-33298511)
chr8 (376-422)||(44101372-44101418)
chr8 (258-355)||(29790834-29790931)
chr8 (386-422)||(17070989-17071025)
chr8 (386-422)||(17577247-17577283)
chr8 (377-437)||(23702194-23702253)
chr8 (393-437)||(44269189-44269233)
chr8 (249-332)||(5916759-5916842)
chr8 (318-353)||(8287745-8287780)
chr8 (264-355)||(9762283-9762374)
chr8 (183-229)||(22846709-22846756)
chr8 (318-353)||(37205682-37205717)
chr8 (378-437)||(37813279-37813337)
chr8 (394-437)||(41487413-41487456)
chr8 (394-437)||(44101492-44101535)
chr8 (263-341)||(14880417-14880495)
chr8 (317-355)||(17071047-17071085)
chr8 (248-310)||(17071807-17071867)
chr8 (248-310)||(17576406-17576466)
chr8 (317-355)||(17577187-17577225)
chr8 (186-239)||(20699450-20699504)
chr8 (376-437)||(25144128-25144189)
chr8 (187-240)||(26824088-26824141)
chr8 (391-428)||(29657901-29657938)
chr8 (388-437)||(35213096-35213145)
chr8 (378-422)||(22192486-22192529)
chr8 (299-355)||(35213169-35213225)
chr8 (249-353)||(41625528-41625632)
chr8 (183-230)||(45515933-45515981)
[»] chr6 (37 HSPs)
chr6 (183-355)||(33399786-33399958)
chr6 (184-355)||(6036800-6036971)
chr6 (183-355)||(30349349-30349522)
chr6 (185-355)||(266252-266420)
chr6 (248-353)||(26311546-26311651)
chr6 (187-342)||(10727347-10727504)
chr6 (183-328)||(2853582-2853730)
chr6 (186-355)||(18031082-18031250)
chr6 (183-344)||(17248636-17248799)
chr6 (258-355)||(5003219-5003316)
chr6 (374-437)||(12766399-12766461)
chr6 (248-351)||(20474849-20474951)
chr6 (186-355)||(32143261-32143432)
chr6 (249-352)||(26601528-26601631)
chr6 (263-345)||(3812822-3812903)
chr6 (376-422)||(10727273-10727319)
chr6 (376-437)||(2840857-2840918)
chr6 (292-351)||(11351746-11351805)
chr6 (394-437)||(28011329-28011372)
chr6 (186-345)||(239095-239256)
chr6 (379-437)||(18031002-18031059)
chr6 (183-232)||(30349620-30349670)
chr6 (376-422)||(33401240-33401286)
chr6 (376-437)||(2853495-2853555)
chr6 (376-437)||(30349541-30349601)
chr6 (397-437)||(266189-266229)
chr6 (183-230)||(2203416-2203464)
chr6 (394-437)||(238995-239038)
chr6 (183-229)||(2841079-2841126)
chr6 (394-437)||(3579662-3579705)
chr6 (378-437)||(10727382-10727440)
chr6 (318-353)||(12256901-12256936)
chr6 (248-355)||(17532318-17532424)
chr6 (378-436)||(5003267-5003324)
chr6 (387-437)||(32143447-32143497)
chr6 (374-422)||(5606936-5606984)
chr6 (202-230)||(20474970-20474998)
[»] chr1 (66 HSPs)
chr1 (184-352)||(16874646-16874816)
chr1 (183-345)||(3377501-3377665)
chr1 (183-351)||(45738936-45739105)
chr1 (186-343)||(8301497-8301655)
chr1 (185-344)||(1096469-1096630)
chr1 (259-354)||(46912332-46912427)
chr1 (248-354)||(39642349-39642455)
chr1 (249-434)||(44672380-44672555)
chr1 (258-355)||(16298197-16298294)
chr1 (183-355)||(17760682-17760858)
chr1 (252-355)||(25486285-25486387)
chr1 (248-355)||(30849370-30849477)
chr1 (268-355)||(48319490-48319577)
chr1 (202-355)||(49426133-49426284)
chr1 (248-355)||(50226531-50226638)
chr1 (248-351)||(50401438-50401540)
chr1 (263-345)||(41997791-41997873)
chr1 (186-343)||(17692730-17692887)
chr1 (248-345)||(18632382-18632479)
chr1 (376-437)||(23891727-23891788)
chr1 (183-355)||(32295093-32295267)
chr1 (186-342)||(12960998-12961155)
chr1 (248-351)||(14190686-14190789)
chr1 (248-355)||(25085533-25085640)
chr1 (248-355)||(44436824-44436930)
chr1 (378-437)||(45739123-45739182)
chr1 (376-437)||(17760875-17760936)
chr1 (249-333)||(8009796-8009880)
chr1 (183-355)||(14978797-14978970)
chr1 (248-355)||(46572893-46572998)
chr1 (248-354)||(7579731-7579837)
chr1 (248-354)||(23220633-23220739)
chr1 (184-232)||(5287838-5287887)
chr1 (264-345)||(16545643-16545724)
chr1 (376-437)||(39642268-39642329)
chr1 (378-437)||(16874691-16874749)
chr1 (252-355)||(20224671-20224773)
chr1 (394-437)||(41997707-41997750)
chr1 (265-355)||(5287367-5287457)
chr1 (249-295)||(7060696-7060742)
chr1 (183-232)||(12960846-12960896)
chr1 (264-354)||(46505311-46505401)
chr1 (374-428)||(46573010-46573064)
chr1 (183-232)||(51250485-51250535)
chr1 (376-437)||(3377697-3377758)
chr1 (249-353)||(6320631-6320733)
chr1 (376-437)||(12960913-12960974)
chr1 (248-344)||(6569658-6569754)
chr1 (376-429)||(48319589-48319644)
chr1 (318-353)||(14879-14914)
chr1 (386-437)||(23220757-23220808)
chr1 (318-353)||(32558353-32558388)
chr1 (318-353)||(33811562-33811597)
chr1 (318-353)||(34988227-34988262)
chr1 (376-437)||(1096633-1096695)
chr1 (186-231)||(15659259-15659305)
chr1 (376-422)||(25486397-25486443)
chr1 (376-422)||(27864255-27864300)
chr1 (202-232)||(50226412-50226442)
chr1 (376-422)||(50401558-50401603)
chr1 (249-310)||(6606603-6606664)
chr1 (376-429)||(15659056-15659108)
chr1 (317-354)||(18216820-18216857)
chr1 (249-333)||(19893066-19893150)
chr1 (315-355)||(7061368-7061408)
chr1 (318-354)||(7598746-7598782)
[»] chr3 (90 HSPs)
chr3 (183-354)||(51315625-51315798)
chr3 (248-437)||(44436456-44436645)
chr3 (183-354)||(54719138-54719309)
chr3 (183-355)||(3916431-3916603)
chr3 (186-355)||(44585926-44586097)
chr3 (257-355)||(25843441-25843539)
chr3 (263-355)||(36687731-36687823)
chr3 (248-434)||(44433126-44433311)
chr3 (184-355)||(1814697-1814866)
chr3 (248-355)||(1938383-1938490)
chr3 (264-355)||(19404534-19404625)
chr3 (248-355)||(33329757-33329864)
chr3 (183-354)||(38177178-38177349)
chr3 (248-355)||(43747420-43747527)
chr3 (248-354)||(27178288-27178394)
chr3 (263-437)||(14856614-14856788)
chr3 (183-355)||(20432324-20432497)
chr3 (248-355)||(47189734-47189841)
chr3 (248-343)||(54464229-54464324)
chr3 (183-310)||(38957845-38957975)
chr3 (249-355)||(46226765-46226871)
chr3 (186-354)||(48348400-48348569)
chr3 (263-355)||(7218291-7218383)
chr3 (263-355)||(36677651-36677743)
chr3 (248-355)||(28712521-28712628)
chr3 (376-422)||(54719073-54719119)
chr3 (376-437)||(14340801-14340862)
chr3 (380-437)||(25154370-25154427)
chr3 (376-437)||(43747346-43747407)
chr3 (267-355)||(44624710-44624797)
chr3 (184-296)||(50802660-50802773)
chr3 (184-296)||(50873104-50873217)
chr3 (258-355)||(52008319-52008418)
chr3 (376-435)||(3192967-3193026)
chr3 (252-354)||(35359067-35359169)
chr3 (253-338)||(791477-791562)
chr3 (376-437)||(12759576-12759635)
chr3 (376-437)||(28204545-28204606)
chr3 (183-355)||(3192774-3192947)
chr3 (377-437)||(4474256-4474316)
chr3 (377-437)||(8024842-8024902)
chr3 (397-437)||(28712668-28712708)
chr3 (389-437)||(51315562-51315610)
chr3 (183-355)||(14340874-14341046)
chr3 (185-296)||(22494555-22494667)
chr3 (265-328)||(49787334-49787397)
chr3 (283-345)||(14992781-14992843)
chr3 (183-294)||(44127547-44127661)
chr3 (376-422)||(44624816-44624861)
chr3 (260-345)||(4474147-4474231)
chr3 (183-295)||(25902553-25902667)
chr3 (376-437)||(38958030-38958091)
chr3 (376-437)||(44585855-44585916)
chr3 (249-353)||(36567016-36567120)
chr3 (184-341)||(43586715-43586872)
chr3 (394-434)||(47189667-47189707)
chr3 (386-437)||(86758-86809)
chr3 (376-435)||(14992691-14992750)
chr3 (394-437)||(15978895-15978938)
chr3 (386-437)||(17773238-17773288)
chr3 (386-437)||(19074539-19074589)
chr3 (183-229)||(25248692-25248739)
chr3 (249-280)||(25248758-25248789)
chr3 (398-437)||(28712522-28712561)
chr3 (183-294)||(28712663-28712775)
chr3 (318-353)||(37182140-37182175)
chr3 (378-437)||(44436586-44436644)
chr3 (378-437)||(51315672-51315730)
chr3 (268-355)||(53184596-53184682)
chr3 (249-295)||(4474270-4474316)
chr3 (376-422)||(25248872-25248918)
chr3 (248-294)||(38958046-38958092)
chr3 (319-353)||(42230172-42230206)
chr3 (319-353)||(45744037-45744071)
chr3 (184-229)||(53020587-53020633)
chr3 (376-437)||(1814616-1814676)
chr3 (376-437)||(7218220-7218280)
chr3 (202-231)||(29512567-29512596)
chr3 (249-353)||(32508060-32508164)
chr3 (248-297)||(35359182-35359231)
chr3 (318-355)||(38511796-38511833)
chr3 (388-437)||(46226887-46226936)
chr3 (249-334)||(54716667-54716752)
chr3 (263-355)||(86655-86747)
chr3 (321-353)||(10439426-10439458)
chr3 (299-355)||(12759648-12759704)
chr3 (183-230)||(25154447-25154495)
chr3 (377-437)||(28944096-28944155)
chr3 (186-229)||(36677783-36677827)
chr3 (397-437)||(44127552-44127592)
[»] scaffold0062 (2 HSPs)
scaffold0062 (249-342)||(46228-46321)
scaffold0062 (394-437)||(46144-46187)
[»] chr7 (62 HSPs)
chr7 (186-355)||(36580415-36580585)
chr7 (186-355)||(18504246-18504417)
chr7 (183-355)||(35250119-35250292)
chr7 (183-355)||(28785895-28786071)
chr7 (183-345)||(17931880-17932040)
chr7 (183-355)||(41243644-41243816)
chr7 (249-355)||(29834291-29834397)
chr7 (187-355)||(21505758-21505927)
chr7 (248-352)||(6726398-6726501)
chr7 (183-355)||(15107132-15107303)
chr7 (186-355)||(18186591-18186763)
chr7 (184-354)||(28472391-28472560)
chr7 (248-354)||(4049775-4049882)
chr7 (183-355)||(15029058-15029234)
chr7 (248-355)||(36903330-36903436)
chr7 (248-344)||(15348018-15348113)
chr7 (183-355)||(20184916-20185090)
chr7 (185-336)||(47909696-47909848)
chr7 (376-437)||(4049907-4049968)
chr7 (376-437)||(5172709-5172770)
chr7 (374-437)||(20185100-20185163)
chr7 (264-354)||(8073957-8074047)
chr7 (183-232)||(36903531-36903581)
chr7 (248-333)||(3381929-3382013)
chr7 (183-228)||(14247569-14247614)
chr7 (376-437)||(15348143-15348203)
chr7 (183-229)||(42256582-42256630)
chr7 (183-231)||(12905791-12905839)
chr7 (377-437)||(18186507-18186567)
chr7 (376-428)||(35250305-35250357)
chr7 (261-329)||(45717978-45718046)
chr7 (386-437)||(28472574-28472624)
chr7 (376-422)||(18504426-18504472)
chr7 (202-333)||(28350307-28350436)
chr7 (376-437)||(36580341-36580401)
chr7 (183-310)||(28350116-28350245)
chr7 (394-437)||(10097623-10097665)
chr7 (394-437)||(14247361-14247404)
chr7 (378-437)||(15029129-15029187)
chr7 (318-353)||(16879373-16879408)
chr7 (391-422)||(19645003-19645034)
chr7 (258-337)||(20505147-20505226)
chr7 (306-353)||(38879286-38879333)
chr7 (394-437)||(41243846-41243889)
chr7 (398-437)||(45697560-45697599)
chr7 (186-231)||(6792061-6792107)
chr7 (183-231)||(3318318-3318367)
chr7 (318-355)||(3319179-3319216)
chr7 (258-355)||(5172588-5172685)
chr7 (376-437)||(15107060-15107120)
chr7 (264-345)||(19644885-19644966)
chr7 (268-337)||(23826106-23826175)
chr7 (376-437)||(28785825-28785886)
chr7 (249-334)||(36801761-36801846)
chr7 (376-437)||(40872234-40872295)
chr7 (393-437)||(3247376-3247420)
chr7 (183-295)||(4049922-4050035)
chr7 (401-437)||(8662825-8662861)
chr7 (376-419)||(11373933-11373974)
chr7 (394-422)||(17876361-17876389)
chr7 (318-354)||(25987063-25987099)
chr7 (378-422)||(36903459-36903502)
[»] chr5 (67 HSPs)
chr5 (183-355)||(27904623-27904797)
chr5 (183-437)||(32391786-32392033)
chr5 (183-355)||(12406180-12406354)
chr5 (183-355)||(3333841-3334015)
chr5 (250-345)||(2974702-2974797)
chr5 (183-355)||(25910721-25910897)
chr5 (186-352)||(18402989-18403157)
chr5 (183-355)||(35166297-35166469)
chr5 (184-355)||(43098167-43098337)
chr5 (248-354)||(40276170-40276276)
chr5 (186-355)||(31080480-31080650)
chr5 (248-355)||(9852853-9852960)
chr5 (248-334)||(19131661-19131747)
chr5 (376-437)||(19340828-19340889)
chr5 (183-355)||(22300601-22300774)
chr5 (268-355)||(26563075-26563162)
chr5 (183-355)||(36798170-36798344)
chr5 (185-343)||(37897870-37898029)
chr5 (249-355)||(20512264-20512370)
chr5 (185-355)||(20629884-20630057)
chr5 (376-437)||(40276086-40276147)
chr5 (183-345)||(25363825-25363989)
chr5 (264-355)||(28446087-28446178)
chr5 (376-437)||(21066525-21066586)
chr5 (248-345)||(30604237-30604334)
chr5 (376-422)||(6130337-6130383)
chr5 (249-355)||(16132812-16132918)
chr5 (186-351)||(24405493-24405659)
chr5 (249-355)||(26702504-26702609)
chr5 (249-355)||(26972237-26972342)
chr5 (377-435)||(36798362-36798420)
chr5 (376-437)||(3999153-3999214)
chr5 (183-295)||(12406041-12406154)
chr5 (376-437)||(12406109-12406169)
chr5 (376-437)||(28446190-28446250)
chr5 (263-355)||(3999238-3999330)
chr5 (263-355)||(19340904-19340996)
chr5 (378-437)||(9852854-9852912)
chr5 (374-429)||(9852969-9853023)
chr5 (386-437)||(30603680-30603731)
chr5 (376-422)||(3333774-3333820)
chr5 (376-422)||(22300797-22300843)
chr5 (376-429)||(2974818-2974871)
chr5 (388-437)||(20512396-20512445)
chr5 (376-437)||(31080666-31080726)
chr5 (183-231)||(36798441-36798490)
chr5 (184-355)||(24779276-24779447)
chr5 (257-345)||(34320097-34320185)
chr5 (248-324)||(35877356-35877431)
chr5 (184-355)||(39574240-39574409)
chr5 (183-230)||(40132904-40132952)
chr5 (378-437)||(3333889-3333947)
chr5 (318-353)||(4096588-4096623)
chr5 (292-355)||(6130398-6130461)
chr5 (186-232)||(8284158-8284205)
chr5 (248-307)||(9852973-9853032)
chr5 (318-353)||(10029213-10029248)
chr5 (394-437)||(35166496-35166539)
chr5 (318-353)||(35306843-35306878)
chr5 (376-427)||(39574423-39574474)
chr5 (263-333)||(40133071-40133140)
chr5 (248-289)||(31080686-31080727)
chr5 (317-354)||(31157043-31157080)
chr5 (318-355)||(34734212-34734249)
chr5 (376-437)||(35877465-35877526)
chr5 (248-292)||(35877483-35877527)
chr5 (377-437)||(37897785-37897845)
[»] chr4 (103 HSPs)
chr4 (183-355)||(2836899-2837073)
chr4 (183-355)||(44356538-44356710)
chr4 (183-339)||(8965672-8965824)
chr4 (183-354)||(53312286-53312460)
chr4 (258-355)||(43074728-43074825)
chr4 (183-437)||(10059751-10060013)
chr4 (183-355)||(14449424-14449599)
chr4 (183-355)||(20112290-20112463)
chr4 (183-344)||(2016791-2016954)
chr4 (249-355)||(29697590-29697695)
chr4 (183-355)||(1420684-1420858)
chr4 (183-355)||(52462928-52463101)
chr4 (252-355)||(4796180-4796283)
chr4 (183-354)||(23759715-23759887)
chr4 (186-345)||(47999533-47999693)
chr4 (204-355)||(53924891-53925042)
chr4 (186-355)||(27978695-27978865)
chr4 (248-344)||(51362606-51362702)
chr4 (185-355)||(21871527-21871696)
chr4 (185-355)||(21927388-21927557)
chr4 (264-354)||(51371546-51371636)
chr4 (183-355)||(25909487-25909661)
chr4 (248-339)||(2654125-2654216)
chr4 (183-355)||(12719585-12719760)
chr4 (262-355)||(34567756-34567849)
chr4 (248-355)||(16292335-16292442)
chr4 (263-351)||(21322855-21322943)
chr4 (186-355)||(50769366-50769537)
chr4 (248-355)||(21597542-21597649)
chr4 (186-280)||(2180780-2180874)
chr4 (186-355)||(6637203-6637373)
chr4 (248-345)||(11824256-11824351)
chr4 (376-437)||(42526032-42526093)
chr4 (248-345)||(54983983-54984080)
chr4 (183-310)||(14060888-14061017)
chr4 (374-422)||(21597484-21597532)
chr4 (376-428)||(43074665-43074717)
chr4 (248-355)||(26089537-26089643)
chr4 (248-355)||(31553382-31553489)
chr4 (248-310)||(6207359-6207421)
chr4 (185-355)||(8070630-8070799)
chr4 (183-232)||(19909173-19909223)
chr4 (183-355)||(54855304-54855477)
chr4 (184-294)||(21957668-21957780)
chr4 (376-437)||(35393854-35393915)
chr4 (376-437)||(53924814-53924874)
chr4 (183-307)||(2181313-2181438)
chr4 (187-230)||(14060760-14060804)
chr4 (183-351)||(21451459-21451627)
chr4 (303-355)||(42526103-42526155)
chr4 (376-422)||(6614928-6614972)
chr4 (376-426)||(1571593-1571643)
chr4 (376-422)||(2654037-2654083)
chr4 (376-422)||(3658110-3658156)
chr4 (183-240)||(4796036-4796094)
chr4 (376-422)||(21322790-21322836)
chr4 (185-274)||(1420537-1420627)
chr4 (376-437)||(2837085-2837146)
chr4 (376-437)||(6207244-6207305)
chr4 (376-437)||(8965588-8965648)
chr4 (388-437)||(16292465-16292514)
chr4 (250-310)||(3658021-3658081)
chr4 (394-426)||(4796114-4796146)
chr4 (394-434)||(18937311-18937351)
chr4 (318-353)||(5344407-5344442)
chr4 (277-355)||(6614984-6615060)
chr4 (248-307)||(8965587-8965646)
chr4 (394-437)||(11824399-11824442)
chr4 (376-435)||(20117969-20118028)
chr4 (374-437)||(23759628-23759690)
chr4 (186-240)||(29350885-29350940)
chr4 (249-353)||(37289523-37289627)
chr4 (318-353)||(44921751-44921786)
chr4 (386-437)||(49185754-49185805)
chr4 (185-232)||(49185823-49185870)
chr4 (394-437)||(51233680-51233723)
chr4 (318-353)||(51537757-51537792)
chr4 (318-353)||(51696673-51696708)
chr4 (318-353)||(54607024-54607059)
chr4 (376-422)||(2181311-2181356)
chr4 (185-231)||(35615433-35615479)
chr4 (277-355)||(49185665-49185743)
chr4 (376-422)||(50769549-50769594)
chr4 (376-421)||(14016919-14016964)
chr4 (265-346)||(20118052-20118133)
chr4 (186-230)||(20737500-20737545)
chr4 (249-345)||(26675121-26675217)
chr4 (184-232)||(35615315-35615364)
chr4 (248-352)||(51233547-51233651)
chr4 (376-437)||(52462846-52462907)
chr4 (393-437)||(1420602-1420646)
chr4 (183-230)||(1571399-1571447)
chr4 (248-307)||(10059750-10059810)
chr4 (394-434)||(20737437-20737477)
chr4 (394-422)||(21871462-21871490)
chr4 (394-422)||(21927323-21927351)
chr4 (183-230)||(21957539-21957587)
chr4 (397-437)||(21957673-21957713)
chr4 (374-422)||(29697705-29697753)
chr4 (249-289)||(35392683-35392723)
chr4 (186-229)||(42526214-42526258)
chr4 (397-437)||(47999715-47999755)
chr4 (376-436)||(51371649-51371709)
[»] chr2 (68 HSPs)
chr2 (183-354)||(14943686-14943857)
chr2 (186-354)||(2609230-2609399)
chr2 (248-355)||(37803190-37803296)
chr2 (183-355)||(34679097-34679271)
chr2 (183-355)||(39918434-39918608)
chr2 (183-354)||(5470478-5470649)
chr2 (248-355)||(37431610-37431717)
chr2 (183-355)||(43028794-43028967)
chr2 (183-355)||(14489214-14489387)
chr2 (263-355)||(27489514-27489606)
chr2 (249-355)||(44617879-44617985)
chr2 (263-355)||(24472587-24472679)
chr2 (249-341)||(25411609-25411701)
chr2 (252-342)||(5008441-5008531)
chr2 (183-354)||(6592724-6592899)
chr2 (183-353)||(25333499-25333670)
chr2 (183-437)||(31827525-31827779)
chr2 (248-354)||(34760914-34761020)
chr2 (376-437)||(8857233-8857293)
chr2 (183-355)||(4576683-4576854)
chr2 (248-355)||(4925506-4925613)
chr2 (264-355)||(8553684-8553774)
chr2 (249-355)||(8857114-8857220)
chr2 (376-437)||(4576611-4576671)
chr2 (376-437)||(39918627-39918688)
chr2 (183-355)||(41196370-41196539)
chr2 (248-340)||(32969624-32969716)
chr2 (248-355)||(18969234-18969341)
chr2 (264-355)||(24306159-24306250)
chr2 (387-437)||(6510196-6510246)
chr2 (248-297)||(25452-25501)
chr2 (376-437)||(19206208-19206269)
chr2 (388-437)||(34679290-34679339)
chr2 (248-341)||(35718712-35718805)
chr2 (376-437)||(35718842-35718902)
chr2 (264-355)||(5362315-5362407)
chr2 (394-437)||(4925650-4925692)
chr2 (376-434)||(19895685-19895741)
chr2 (264-355)||(19895754-19895845)
chr2 (248-310)||(16043207-16043269)
chr2 (183-229)||(24498106-24498152)
chr2 (387-437)||(37431734-37431784)
chr2 (376-437)||(5470395-5470455)
chr2 (217-295)||(6510200-6510278)
chr2 (376-437)||(6592920-6592980)
chr2 (249-310)||(16238407-16238468)
chr2 (376-437)||(18709312-18709373)
chr2 (183-231)||(19399440-19399489)
chr2 (183-232)||(21361881-21361930)
chr2 (268-345)||(25092382-25092459)
chr2 (183-231)||(36715559-36715608)
chr2 (376-437)||(43028979-43029040)
chr2 (394-437)||(14489415-14489458)
chr2 (264-351)||(18709399-18709486)
chr2 (394-437)||(32969728-32969771)
chr2 (318-353)||(40711478-40711513)
chr2 (183-232)||(16043089-16043139)
chr2 (183-232)||(25375137-25375187)
chr2 (376-422)||(27489621-27489667)
chr2 (376-426)||(37803317-37803366)
chr2 (376-422)||(44617814-44617859)
chr2 (318-355)||(2936928-2936965)
chr2 (302-355)||(19399317-19399370)
chr2 (183-289)||(24306016-24306122)
chr2 (301-354)||(36195720-36195773)
chr2 (184-231)||(19399183-19399231)
chr2 (378-422)||(32013248-32013291)
chr2 (317-353)||(42445508-42445544)
[»] scaffold0015 (3 HSPs)
scaffold0015 (248-355)||(76929-77035)
scaffold0015 (376-437)||(77046-77107)
scaffold0015 (183-232)||(77125-77175)
[»] scaffold0137 (1 HSPs)
scaffold0137 (184-351)||(19915-20083)
[»] scaffold0328 (2 HSPs)
scaffold0328 (186-355)||(9415-9585)
scaffold0328 (376-437)||(9606-9667)
[»] scaffold0809 (1 HSPs)
scaffold0809 (186-351)||(2905-3068)
[»] scaffold0578 (1 HSPs)
scaffold0578 (252-342)||(3146-3236)
[»] scaffold0011 (1 HSPs)
scaffold0011 (202-355)||(145373-145527)
[»] scaffold0150 (1 HSPs)
scaffold0150 (376-437)||(9618-9678)
[»] scaffold0067 (2 HSPs)
scaffold0067 (376-437)||(4199-4260)
scaffold0067 (248-293)||(4216-4261)
[»] scaffold0417 (2 HSPs)
scaffold0417 (283-355)||(9439-9511)
scaffold0417 (389-433)||(9534-9578)
[»] scaffold0372 (1 HSPs)
scaffold0372 (183-351)||(124-292)
[»] scaffold0025 (3 HSPs)
scaffold0025 (186-232)||(19605-19652)
scaffold0025 (248-354)||(19170-19276)
scaffold0025 (386-437)||(19107-19158)
[»] scaffold0016 (2 HSPs)
scaffold0016 (263-310)||(203361-203408)
scaffold0016 (376-437)||(203256-203317)
[»] scaffold0166 (1 HSPs)
scaffold0166 (184-355)||(21659-21830)
[»] scaffold0014 (1 HSPs)
scaffold0014 (318-353)||(79127-79162)
[»] scaffold0515 (1 HSPs)
scaffold0515 (183-232)||(3639-3689)
[»] scaffold0306 (1 HSPs)
scaffold0306 (183-232)||(3639-3689)
[»] scaffold0041 (1 HSPs)
scaffold0041 (376-437)||(93987-94048)


Alignment Details
Target: chr8 (Bit Score: 151; Significance: 1e-79; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 73 - 437
Target Start/End: Complemental strand, 39890197 - 39889838
Alignment:
Q  73 ggggttggattcaattggtttgaccaaaggtaataaaagagttgataagttaaatgtttatattcaaatcaatattacaatttacatattaatattttct 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  39890197 ggggttggattcaattggtttgaccaaaggtaataaaagagttgataagttaaatgtttatattcaaatcaatattacaattaacgtattaatattttct 39890098  T
Q  173 attnnnnnnnggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaag-nnnnnnnctacaaaaccgccctctaagttt 270  Q
    |||       |||||||||||||||||| | || |||| |||| ||||||||||||||  | |||||||        ||||||| |||||||||||||||    
T  39890097 attaaaaaaaggcttaatagcagttttagctccttaacctttttaaagttgcgatttttaccctctaagaaaaaaaactacaaatccgccctctaagttt 39889998  T
Q  271 tgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgttannnnnnnnnnnnnnn 370  Q
    |||||||||| || ||||| || ||||||||||||||||| | ||||||||||||||||||| ||||||||| |  ||||| ||                    
T  39889997 tgcatctgtggcaattttggcctccaatgtcaattttgactcggtttacgctgacgtgacactctaagtgagataccacgtttt-------ttttttttt 39889905  T
Q  371 nnnatcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
       | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39889904 tttaccaaaaattgatcttgggaggccaaaactgctacagttgcaaaacttatggagcgattttgta 39889838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39890312 - 39890197
Alignment:
Q  1 cgttttagaagcaaaacttcaagtaatagagagtatatgtgaccgccattaacattgaactatcatagaaaaggggttggattcaattggtttgaccaaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39890312 cgttttaaaagcaaaacttcaagtaatagagagtatatgtgaccgccattaacattgaactatcatagaaaaggggttggattcaattggtttgaccaaa 39890213  T
Q  101 ggtaataaaagagttg 116  Q
    ||||||||||||||||    
T  39890212 ggtaataaaagagttg 39890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 30539304 - 30539132
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| ||| |||||||  |||||||||||||||||  | |||||        ||||||||||| || ||||||||||||||||||     
T  30539304 ggcttaatagcagttttagcccttaactttcccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgtcccctaagttttgcatctgtgg 30539205  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||| |||||||||||||||||||  | || || ||||||||| |||||||||||||||| ||||||||    
T  30539204 cagttttggcccccaatgtcaattttgattcggtctatgctgacgtggcaccctaagtgaggtgccacgtgtt 30539132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 16982857 - 16982751
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||| | ||||||||||  ||| |||||||||||| ||||| |||||||||| |    
T  16982857 ctacaaaaccgccccctaagttttgcatctgtgccagttttg-cccccaaggccaattttgacttagtctacgctgacgtggcaccccaagtgaggtgcc 16982759  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  16982758 acgtgtta 16982751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 6807480 - 6807311
Alignment:
Q  183 ggcttaatagcagttttaa-cccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||| |||||  |||||||||||  ||||||||| |||||| | ||||||        |||||||||| ||| ||||||||||||| ||||     
T  6807480 ggcttaatagcaattttagtcccctaactttcccaaagttgcaattttgaccctctaa--aaaaaactacaaaaccaccccctaagttttgcatttgtgg 6807383  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||| ||| ||| |||||||||||| | || |||||||||||| |||||||||||||||| |||||||    
T  6807382 cagttttgtccctcaaggtcaattttgactctgtctacgctgacgtggcaccctaagtgaggtgccacgtgt 6807311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 354
Target Start/End: Original strand, 29657702 - 29657877
Alignment:
Q  185 cttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnn----ctacaaaaccgccctctaagttttgcatctgt 279  Q
    |||||||| ||||||| | |||||||||| ||||||||||||||||||| |||||||           |||||||||||||| |||| |||||||| |||    
T  29657702 cttaataggagttttacctccctaactttatcaaagttgcgattttggccctctaagaagaaaaaaaactacaaaaccgccccctaaattttgcatatgt 29657801  T
Q  280 gacagttttgaccccc-aatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    | |||||||| ||||| || |||||||||||  | || ||| ||||||||||||||||||||||||| ||||||||    
T  29657802 ggcagttttggccccccaaagtcaattttgattcggtctacactgacgtgacaccctaagtgaggtgccacgtgtt 29657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 3676375 - 3676268
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| |||||||||||||||||| ||||||||  ||||||   |||||||||| | || |||||||||||| |||||||||||||||| |    
T  3676375 ctacaaaaccgcccactaagttttgcatctgtggcagttttggtccccaaaaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 3676276  T
Q  348 acgtgtta 355  Q
    | ||||||    
T  3676275 atgtgtta 3676268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 37813338 - 37813247
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagt 339  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||| | |||||||||| | || |||||||||||| ||||||||||    
T  37813338 ctacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagt 37813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 23702448 - 23702275
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| |||| |||||||   |||||||||||||| || | |||||        |||||||  | || ||||||||||||| |||||    
T  23702448 ggcttaatagcagttttagccccctaactttccaaaagttgcgattttagccccctaagaaaaaaattacaaaattgtcccctaagttttgcatttgtga 23702349  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| || |||| |||||||||||| |||| || |||||| || ||||||||||||| || |||||||||    
T  23702348 cagttttggcctccaaggtcaattttgactcagtctatgctgacatggcaccctaagtgagatgccacgtgtta 23702275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 21486721 - 21486824
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| |||||||||||| ||||| || ||||| || ||||  |||||||||||   || ||||||||||||||||||||||||||||| |    
T  21486721 ctacaaaaccgccccctaagttttgcacctgtggcatttttggcctccaagatcaattttgacttggtctacgctgacgtgacaccctaagtgaggtgtc 21486820  T
Q  348 acgt 351  Q
    ||||    
T  21486821 acgt 21486824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 45177201 - 45177375
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||||| |||| || ||||||||| |||||||||||||||||   | |||||        |||||||| || || ||||||||||||||||||    
T  45177201 ggcttaatagcagatttagcctcctaactttctcaaagttgcgattttgatcccctaagaaaaaaaactacaaaatcgtcccctaagttttgcatctgtg 45177300  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| ||| ||| |  ||||||||| | || ||| |||||||| |||||||||||||||| ||| |||||    
T  45177301 acagttttggccctcaaggctaattttgactcggtctacactgacgtggcaccctaagtgaggtgtcacatgtta 45177375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 186 - 345
Target Start/End: Complemental strand, 41487520 - 41487360
Alignment:
Q  186 ttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||| || || ||||        |||||||||||||| |||||||||||| ||||  |     
T  41487520 ttaatagcagttttagccctctaacttttccaaagttgcgattttagccct-taagaaaaaaaactacaaaaccgccccctaagttttgcaactgtagct 41487422  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||| |||||||   |||||||||| | || |||||||||||||||| ||||||||||||    
T  41487421 gttttggcccccaagaccaattttgactcggtctacgctgacgtgacacgctaagtgaggtg 41487360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 26823828 - 26823989
Alignment:
Q  185 cttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||||| |||||||| |||||||| |||||||| | |  ||||        |||||||| | ||| ||||||||||||| |||| |    
T  26823828 cttaatagcagttttaaccctctaactttctcaaagttacgattttgaccccttaagaaaaaaaactacaaaatcaccccctaagttttgcatttgtggc 26823927  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
    |||||||  |||||||| |||||||||  || | || | |||||||||||||||||||||||    
T  26823928 agttttgggccccaatgccaattttgattcaatctaggttgacgtgacaccctaagtgaggt 26823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 345
Target Start/End: Complemental strand, 32071325 - 32071165
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||| | | |||||       |||||||||||||| ||||||||||||| | ||||    
T  32071325 ggcttaatagcagttttagcccctaacttttctaaagttgcgattttgac-ccctaag-aaaaaactacaaaaccgccccctaagttttgcatatatgac 32071228  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||  | ||||   |||||||||| | || ||||||||| |  |||| |||||||||||    
T  32071227 agttttggtctccaagaacaattttgactcggtctacgctgacatatcaccttaagtgaggtg 32071165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 437
Target Start/End: Complemental strand, 41487326 - 41487268
Alignment:
Q  379 aaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  41487326 aaattggccttgggcggccaaaactgctacagttgcaaaacttagggggcggttttgta 41487268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 45177393 - 45177454
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  45177393 caaaaattggctttgggaggccaaaactactacagttgcaaaacttatggggcagttttgta 45177454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 25144024 - 25144116
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||||||| |||||||| |  |||| | |||||||||| | ||||||||||||||  |||||||||||| ||| ||| |||||    
T  25144024 ctaagttttgcatctgtggcagttttggcatccaaagccaattttgactcggtttacgctgacgttgcaccctaagtgatgtgccacatgtta 25144116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 562
Target Start/End: Complemental strand, 39888451 - 39888411
Alignment:
Q  522 aaatagtccaccaaattcaatataatccaacattgcacaat 562  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39888451 aaatagtccaccaaattcaatataatccaacattgcacaat 39888411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 29044778 - 29044687
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| |||| |||||||| ||||||| | |||||||||| | || ||||||||||||  ||||||| ||||||| |||| ||||    
T  29044778 taagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggtaccctaaatgaggtgccacgcgtta 29044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 41567182 - 41567087
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgagg 343  Q
    ||||||||| | || |||| |||||||||||| |||||||| |||| |||||| ||||||||| | || || |||||||||||||| ||| |||||    
T  41567182 ctacaaaacagtcccctaaattttgcatctgtcacagttttaaccctcaatgttaattttgactcggtctatgctgacgtgacaccttaaatgagg 41567087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 30539117 - 30539056
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||| |||||  |||||||    
T  30539117 caaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggcagttttgta 30539056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 42218555 - 42218429
Alignment:
Q  185 cttaatagcagttttaacccctaactttttca-aagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    |||||||||||||||||||| | |  |||| | |||||||||||||| |||| ||||       ||||||||||| || |||||||||||  | ||| ||    
T  42218555 cttaatagcagttttaaccctttaagttttaagaagttgcgattttgacactataagaaaaaaactacaaaaccgtcccctaagttttgccccagtggca 42218456  T
Q  284 gttttgacccccaatgtcaattttgac 310  Q
    |||||||||||| | ||||||||||||    
T  42218455 gttttgaccccctaggtcaattttgac 42218429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 36688311 - 36688263
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttg 230  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  36688311 ggcttaatagcagttttaaccccctaactttttcaaagttgtgattttg 36688263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 20853378 - 20853549
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| |||| ||||||| |  |||||||||||||| | | ||||        |||||||||| ||| ||||||||||||| ||||     
T  20853378 ggcttaatagcagttttagccccctaactttcttgaagttgcgattttgaccccctaa-aaaaaaactacaaaaccaccccctaagttttgcatatgtgg 20853476  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||| |||||||  ||||||||||     | |||| ||||||| ||||| || ||||||| ||||||||    
T  20853477 cagttttggcccccaagatcaattttgaatagatctacgttgacgtggcacccaaaatgaggtgccacgtgtt 20853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 25896993 - 25897040
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  25896993 ttaatagcagttttagccccctaactttttcaaagttgcgattttggc 25897040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 354
Target Start/End: Original strand, 27545422 - 27545512
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||||||||||||||| || |||||||| |||| || | ||||||| || |  | |||||||||||| |||||||||||||||| ||||||||    
T  27545422 ctaagttttgcatctatggcagttttggccccaaa-gccaattttaactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgtt 27545512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 22192545 - 22192439
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| |  |||||||||||| ||||  | |||||| |  |||| |||||||||||| | || |||||| | ||| |||||||||||||||| |    
T  22192545 ctacaaaaccgtctcctaagttttgcaactgtagccgttttggctgccaaggtcaattttgactcggtctacgcttatgtggcaccctaagtgaggtgtc 22192446  T
Q  348 acgtgtt 354  Q
    |||||||    
T  22192445 acgtgtt 22192439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 22846526 - 22846616
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||||||| || |||||||| ||| ||| | |||||||||    || ||||||||| || |||||||||||||||| ||||||||    
T  22846526 taagttttgcatctttggcagttttggccctcaagggcaattttgaattggtctacgctgacatggcaccctaagtgaggtgccacgtgtt 22846616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 353
Target Start/End: Original strand, 33298422 - 33298511
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtc-aattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    ||||||| ||||||||| |||||||| | ||||| ||| ||||||||  | || |||||||||||| |||||||||||||||| |||||||    
T  33298422 taagtttggcatctgtggcagttttggctcccaa-gtctaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacgtgt 33298511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 44101418 - 44101372
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||    
T  44101418 caaaaattggtcttgggaggccaaaactgctaaagttgcaaaactta 44101372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 29790834 - 29790931
Alignment:
Q  258 gccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||||||  |||| ||||||||  |||| | ||||||||||||   || |||||||||||| ||||||| |||| ||| ||| |||||    
T  29790834 gccctctaagttttgcacatgtggcagttttggtccccgaggtcaattttgacttggtctacgctgacgtggcaccctatgtgaagtgtcacatgtta 29790931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 17071025 - 17070989
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||| |||||||||||||||||||||||||||||    
T  17071025 ccttggggggccaaaactgctacagttgcaaaactta 17070989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 17577247 - 17577283
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||| |||||||||||||||||||||||||||||    
T  17577247 ccttggggggccaaaactgctacagttgcaaaactta 17577283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 23702253 - 23702194
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| ||||||| | |||||||| |||||||||||||||||| |||||| |||||||    
T  23702253 aaaaattggccttgggggaccaaaactactacagttgcaaaactta-ggggcggttttgta 23702194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 44269233 - 44269189
Alignment:
Q  393 aggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||    
T  44269233 aggccaaaactactacagttgcaaaacttagggggtgattttgta 44269189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 332
Target Start/End: Complemental strand, 5916842 - 5916759
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacac 332  Q
    |||||||| |||||||| || ||| |||| || |||||||| ||| | | |||||||||||| ||||  |||||||||||||||    
T  5916842 tacaaaacagccctctatgtattggatctttggcagttttggccctctaagtcaattttgactcagtcaacgctgacgtgacac 5916759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 8287780 - 8287745
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  8287780 acgctgacgtgacaccctaagtgaggtgccacgtgt 8287745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 9762283 - 9762374
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||| || |||||||| || ||||| ||||||||||  | || |||||||||||| |||  ||| ||||||| ||| |||||    
T  9762283 taagttttgcatctttggcagttttggcctccaatatcaattttgattctgtctacgctgacgtggcacattaaatgaggtgccacatgtta 9762374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 22846756 - 22846709
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgatttt 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  22846756 ggcttaatagcagttttaaccccttaacttttttaaagttgtgatttt 22846709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 37205717 - 37205682
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  37205717 acgctgacgtgacaccctaagtgaggtgccacgtgt 37205682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 37813279 - 37813337
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||||    
T  37813279 aaaattggccttggg-ggccaaaactgccacagatgcaaaacttagggggcggttttgta 37813337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 41487413 - 41487456
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||    
T  41487413 ggccaaaacagctacagttgcaaaacttagggggcggttttgta 41487456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 44101492 - 44101535
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||    
T  44101492 ggccaaaactgctacagatgcaaaacttaaggggtgattttgta 44101535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 14880417 - 14880495
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtga 341  Q
    |||| ||||||||||||| |||||||| ||||||| | | |||||||| | || || ||||||||| || |||||||||    
T  14880417 ctaaattttgcatctgtggcagttttggcccccaaggccgattttgactcggtctatgctgacgtggcatcctaagtga 14880495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 17071085 - 17071047
Alignment:
Q  317 tacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  17071085 tacgctgacgtggcaccctaagtgaggtgccacgtgtta 17071047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 17071867 - 17071807
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    |||||||||||||| |||||||||||| |||||||||||||   |||||| ||||||||||||    
T  17071867 ctacaaaaccgccc-ctaagttttgcacctgtgacagtttt-tgccccaaggtcaattttgac 17071807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 17576406 - 17576466
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    |||||||||||||| |||||||||||| |||||||||||||   |||||| ||||||||||||    
T  17576406 ctacaaaaccgccc-ctaagttttgcacctgtgacagtttt-tgccccaaggtcaattttgac 17576466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 17577187 - 17577225
Alignment:
Q  317 tacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  17577187 tacgctgacgtggcaccctaagtgaggtgccacgtgtta 17577225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 20699504 - 20699450
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaa 239  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||  |||||||    
T  20699504 ttaatagcagttttaaccccctaacttttttaaagttgcaattttgatactctaa 20699450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 25144128 - 25144189
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||| ||| ||| |||||||||||| |||| | |||||||    
T  25144128 caaaaattggccttggggggccaaaattgcaacaattgcaaaacttagggggtggttttgta 25144189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 26824141 - 26824088
Alignment:
Q  187 taatagcagttttaacccctaactttttcaaagttgcgattttggcactctaag 240  Q
    ||||||||||||| ||||||||||||  | |||||||||||||| | |||||||    
T  26824141 taatagcagttttcacccctaactttcacgaagttgcgattttgaccctctaag 26824088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 29657901 - 29657938
Alignment:
Q  391 ggaggccaaaactgctacagttgcaaaacttatggggc 428  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  29657901 ggaggccaaaacggctacagttgcaaaacttaaggggc 29657938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 35213145 - 35213096
Alignment:
Q  388 ttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| ||||||||||| ||||||||||||||||| |||||  |||||||    
T  35213145 ttggggggccaaaactgttacagttgcaaaacttaaggggcagttttgta 35213096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 22192486 - 22192529
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||| || ||||||| |||||||||||||||||||    
T  22192486 aaaattgaccttggcag-ccaaaacggctacagttgcaaaactta 22192529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 35213225 - 35213169
Alignment:
Q  299 gtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| | |  |||||||||||| |||| ||||||||||| |||||||||    
T  35213225 gtcaattttgactcggcctacgctgacgtggcaccttaagtgaggtgccacgtgtta 35213169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 353
Target Start/End: Original strand, 41625528 - 41625632
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    |||||||| |||| ||| ||||||  ||| || ||||||||| |||| |  ||| | ||||| | ||  ||||||||||| |||||||||||||||| ||    
T  41625528 tacaaaacagccccctatgttttgattctttggcagttttgaacccccagttcagtgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcca 41625627  T
Q  349 cgtgt 353  Q
    |||||    
T  41625628 cgtgt 41625632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 45515933 - 45515981
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttg 230  Q
    |||||||| ||||||||| ||||| || |||||||||||||||||||||    
T  45515933 ggcttaattgcagttttagccccttaattttttcaaagttgcgattttg 45515981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 33399786 - 33399958
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||       |||||||||||  | ||||||||| ||| |||| |    
T  33399786 ggcttaatagcagttttagcccctaacttttccaaagttgcgattttggccctctaagaaaaaaactacaaaaccggaccctaagttttacatttgtggc 33399885  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| |||| || |||||||||||| | || |||||||||||| |||||||||||| ||| |||||||||    
T  33399886 agttttggcccctaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgatgtgtcacgtgtta 33399958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 6036971 - 6036800
Alignment:
Q  184 gcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||   |||||       ||||||||| | || ||||||||||||| |||| ||    
T  6036971 gcttaatagcagttttagcccctaacttttctaaagttgcgattttggcctcctaagaagaaaactacaaaactgtcccctaagttttgcatatgtggca 6036872  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||| | ||||||||||   ||||| |||||||||||||||||||||||||| ||| |||||    
T  6036871 gttttgacccccaaagccaattttgacttggtttatgctgacgtgacaccctaagtgaggtgccacatgtta 6036800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 30349349 - 30349522
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| ||| ||||||||  ||||||||||||||||   | |||||       ||||||||||||||  |||||||||||||||||     
T  30349349 ggcttaatagcagttttagccctctaactttcccaaagttgcgattttgagcccctaagaaaaaaactacaaaaccgccccttaagttttgcatctgtgg 30349448  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     ||||||||||||||| | ||||| |||| | || |||| ||||||| |||||||||||||||| ||| |||||    
T  30349449 tagttttgacccccaaggccaattatgactcggtctacgttgacgtggcaccctaagtgaggtgccacatgtta 30349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 266420 - 266252
Alignment:
Q  185 cttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||  | |||||        |||||||||||||  ||||||||||| ||||| |||    
T  266420 cttaatatcagttttaacccctaactttctcaaaattgcgattttgggtc-ctaagaaaaaaattacaaaaccgccccttaagttttgcacctgtggcag 266322  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| |||| ||   |||||||||  | || ||||||||||||||| ||||||||||||| |||||||||    
T  266321 ttttggccccaaaac-caattttgattcggtctacgctgacgtgacatcctaagtgaggtgtcacgtgtta 266252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 26311651 - 26311546
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||| |||  |||||||||||| |||| |||||||| ||||||| |||||||||||| | || |||||||||||| || ||||||||||||| |    
T  26311651 ctacaaaaccaccccttaagttttgcatatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcc 26311552  T
Q  348 acgtgt 353  Q
    ||||||    
T  26311551 acgtgt 26311546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 187 - 342
Target Start/End: Complemental strand, 10727504 - 10727347
Alignment:
Q  187 taatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||| | |||||        |||||||||||||| |||||||||||||||||| |||    
T  10727504 taatagcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcag 10727405  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgag 342  Q
    ||||| ||||||| | ||||||||||    | ||||||||||||  ||||||||||||    
T  10727404 ttttggcccccaaggccaattttgacttgatctacgctgacgtgggaccctaagtgag 10727347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 2853730 - 2853582
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactc-taagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgt 279  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||| | | ||||        |||||||||||||| ||||||||| ||| |||    
T  2853730 ggcttaatagcagttttaacctcctaactttctcaaagttgcaattttggcccccctaagaaaaaaaactacaaaaccgccccctaagtttttcatatgt 2853631  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtg 328  Q
    | |||||||| ||||||| | |||||||||| || | ||||||||||||    
T  2853630 ggcagttttggcccccaaggccaattttgactcattctacgctgacgtg 2853582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 18031250 - 18031082
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacagt 285  Q
    ||||||| ||||||||||||||||||||| |||||||  |||||||  || ||||       ||||||||||| ||  ||||||||| || ||||| |||    
T  18031250 ttaatagtagttttaacccctaacttttttaaagttggaattttggtcctttaagaaaaaa-ctacaaaaccgtcccttaagttttgtatttgtgatagt 18031152  T
Q  286 tttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| ||| |||  |||||||||||   || |||||||||||| |||||||||||||||| ||| |||||    
T  18031151 tttggccctcaagatcaattttgacttggtctacgctgacgtggcaccctaagtgaggtgtcacttgtta 18031082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 17248636 - 17248799
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||   |||||||        |  |||||||||||||||||||||||||||| |    
T  17248636 ggcttaatagcagttttagcctcctaacttttttaaagttgcgattttgatcctctaagaaaaaaaacctcaaaaccgccctctaagttttgcatctgcg 17248735  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
    ||||||||| |||  ||   |||||||||  | || |||| ||||||| |||||||||||||||    
T  17248736 acagttttggcccttaagaccaattttgattcggtctacgttgacgtggcaccctaagtgaggt 17248799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 5003316 - 5003219
Alignment:
Q  258 gccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| ||||||||||||  |||| |||||||| | ||||||||||||||| ||   || ||||||||||||||||||||||||||||| ||| |||||    
T  5003316 gccccctaagttttgcaattgtggcagttttggctcccaatgtcaattttaacttggtctacgctgacgtgacaccctaagtgaggtgtcacatgtta 5003219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 374 - 437
Target Start/End: Original strand, 12766399 - 12766461
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  12766399 atcaaaaattggccttggg-ggccaaaactgctacagttgcaaaacttaaggggcggttttgta 12766461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 20474951 - 20474849
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||| ||||| | || |||| ||||||| ||  ||| |||||||| |    
T  20474951 ctacaaaac-gccccctaagttttgcatctgtggcagttttggcccccaatgtcaatgttgactcggtatacgttgacgtggcagtctatgtgaggtgcc 20474853  T
Q  348 acgt 351  Q
    ||||    
T  20474852 acgt 20474849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 32143261 - 32143432
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnc---tacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||| |||| |||||||||||||||||||||||||||||   |||||||           |||||||||||||  ||||||||||| ||||| |    
T  32143261 ttaatagcagatttagcccctaactttttcaaagttgcgattttgat-ctctaagagaaaaaaaattacaaaaccgccccttaagttttgcacctgtggc 32143359  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| |||||||   |||||||||| | || |||| ||| ||| ||| |||||||||||| ||| |||||    
T  32143360 agttttggcccccaagaccaattttgactcggtctacgttgatgtggcactctaagtgaggtggcacatgtta 32143432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 352
Target Start/End: Original strand, 26601528 - 26601631
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||| ||| |||||||||||||||||||||| ||||  ||||||   |||||||||| | || |||||||| ||  |||||| ||||||||| ||    
T  26601528 tacaaaaccaccccctaagttttgcatctgtgacagctttggtccccaagaccaattttgactcggtctacgctgatgtagcacccttagtgaggtgtca 26601627  T
Q  349 cgtg 352  Q
    ||||    
T  26601628 cgtg 26601631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 3812822 - 3812903
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||||||||||| |||| |||||||| |||| ||   |||||||||||| || |||||||||||| ||||||||||||||||    
T  3812822 ctaagttttgcatatgtggcagttttggcccc-aagaccaattttgacccggtctacgctgacgtggcaccctaagtgaggtg 3812903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 10727319 - 10727273
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  10727319 caaaaattggccttggggggccaaaactgctacagttgcaaaactta 10727273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 2840918 - 2840857
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||| ||| || |||||||    
T  2840918 caaaaattgacattggggggccaaaactgctacaattgcaaaacttaggggacggttttgta 2840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 351
Target Start/End: Original strand, 11351746 - 11351805
Alignment:
Q  292 ccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||||||| |||||||||| | || |||||||||||| |||||||||||||||| |||||    
T  11351746 ccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgt 11351805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 28011329 - 28011372
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  28011329 ggccaaaactgctacagttgcaaaacttaaggggcggttttgta 28011372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 345
Target Start/End: Complemental strand, 239256 - 239095
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccg--ccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||  | |||||       |||||||| ||  |||  ||||||| ||| ||||  |    
T  239256 ttaatagcagttttaaccccctaactttctcaaagttgcga-tttggtcccctaagaaaaaaactacaaaatcgtcccccataagtttagcacctgttgc 239158  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||||| | ||||| | |||||||||  | || |||||||||||| ||||||||||||||||    
T  239157 agttttggcacccaaggccaattttgattcggtctacgctgacgtggcaccctaagtgaggtg 239095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 437
Target Start/End: Complemental strand, 18031059 - 18031002
Alignment:
Q  379 aaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| |||||  ||||||| |||||||||||||||||||| ||||||||||||||    
T  18031059 aaattgactttggggagccaaaattgctacagttgcaaaactta-ggggcgattttgta 18031002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 30349670 - 30349620
Alignment:
Q  183 ggcttaatagcagttttaa-cccctaactttttcaaagttgcgattttggc 232  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||    
T  30349670 ggcttaatagcagtttttgtcccctaactttttcaaagttgcgattttggc 30349620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 33401240 - 33401286
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||    
T  33401240 caaaaattggtcttggggggccaaaactgctacagttgcaaaactta 33401286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 2853555 - 2853495
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||| ||| || |||||||    
T  2853555 caaaaattggccttggg-gaccaaaactgctacagttgcaaaacttaggggacggttttgta 2853495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 30349541 - 30349601
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| | || |||||||||||||||||||||||||| | ||||||||||    
T  30349541 caaaaattggccttggg-gaccgaaactgctacagttgcaaaacttatgagacgattttgta 30349601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 266229 - 266189
Alignment:
Q  397 caaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  266229 caaaactgctacagttgcaaaacttaaggggcaattttgta 266189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 2203464 - 2203416
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttg 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  2203464 ggcttaatagcagttttaactccttaactttttcaaagttgcgactttg 2203416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 239038 - 238995
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  239038 ggccaaaactgctacggttgcaaaacttaggggacgattttgta 238995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 2841126 - 2841079
Alignment:
Q  183 ggcttaatagcagtttta-acccctaactttttcaaagttgcgatttt 229  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  2841126 ggcttaatagcagttttagacccctaactttttcaaaattgcgctttt 2841079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 3579705 - 3579662
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| |||||||||||||||||||| |||||| |||||||    
T  3579705 ggccaaaagtgctacagttgcaaaacttagggggcggttttgta 3579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 10727382 - 10727440
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||||    
T  10727382 aaaattggccttggg-ggccaaaactgccacagatgcaaaacttagggggcggttttgta 10727440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 12256901 - 12256936
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  12256901 acgctgacgtgacaccctaagtgaggtgccacgtgt 12256936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 17532318 - 17532424
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||||||  ||||||||||| ||||| |||||||| |||| || | || ||||||| | || |||| |||| || ||||| |||||||||| |    
T  17532318 ctacaaaaccgccccttaagttttgcacctgtggcagttttggcccctaaagccagttttgactcggtctacgatgacatggcaccc-aagtgaggtgcc 17532416  T
Q  348 acgtgtta 355  Q
    || |||||    
T  17532417 acatgtta 17532424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 5003267 - 5003324
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgt 436  Q
    ||||||||| ||||||| |||||||||| ||| |||||||||||| ||||| |||||||    
T  5003267 aaaattgacattgggag-ccaaaactgccacaattgcaaaacttagggggcaattttgt 5003324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 32143447 - 32143497
Alignment:
Q  387 cttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||| ||||| |||||||||||||||||||||||  |||| ||||||||    
T  32143447 cttggggggccagaactgctacagttgcaaaacttagagggcaattttgta 32143497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 5606936 - 5606984
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||| |||| || ||||||||||||| |||||| ||||||||    
T  5606936 atcaaaaattggccttcggcggccaaaactgctgcagttgtaaaactta 5606984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 230
Target Start/End: Complemental strand, 20474998 - 20474970
Alignment:
Q  202 cccctaactttttcaaagttgcgattttg 230  Q
    |||||||||||||||||||||||||||||    
T  20474998 cccctaactttttcaaagttgcgattttg 20474970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 184 - 352
Target Start/End: Complemental strand, 16874816 - 16874646
Alignment:
Q  184 gcttaatagcagttttaacccc-taactttttcaaagttgcgattttgg-cactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||||| | |||||||       ||||||||||||||  |||||||||||||||||     
T  16874816 gcttaatagcagttttaaccccctaactttctcaaagttgcaattttggaccctctaagaaaaaaactacaaaaccgccccataagttttgcatctgtgg 16874717  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtg 352  Q
    |||||||| | ||||| | |||||||||| | || |||||||||||| |||||||||||||||| ||||||    
T  16874716 cagttttggctcccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtg 16874646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 183 - 345
Target Start/End: Original strand, 3377501 - 3377665
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||| | |||||        |||||||||||||| ||||||||||||| ||||    
T  3377501 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtg 3377600  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
     |||||||| ||||||| | |||||||||| | || |||||||||||||| ||||||||||||||    
T  3377601 gcagttttggcccccaaggccaattttgactcggtctacgctgacgtgacgccctaagtgaggtg 3377665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 351
Target Start/End: Original strand, 45738936 - 45739105
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||| ||||||| |||||||||| ||||||||| ||||||| | | |||||       ||||||||||||||  |||||||||||||| ||     
T  45738936 ggcttaatagcaattttaactccctaactttctcaaagttgtgattttgaccccctaaggaaaaaactacaaaaccgccccttaagttttgcatctatgg 45739035  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||||||| ||||||| |||||||||||| | || || ||| ||||| |||||||||||||||| |||||    
T  45739036 cagttttggcccccaaagtcaattttgactcggtctatgctaacgtggcaccctaagtgaggtgccacgt 45739105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 186 - 343
Target Start/End: Complemental strand, 8301655 - 8301497
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||||| ||||||| |||| ||||||| | |||||| | |||||||        ||||||||||| || |||| ||||||||||||| |||    
T  8301655 ttaatagcagttttagcccctaatttttccaaagtttcaattttgaccctctaagaataaaaactacaaaaccgtcccctaaattttgcatctgtggcag 8301556  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgagg 343  Q
    |||||||||||||   |||||||||| || | ||||||||||||||||||||| |||||    
T  8301555 ttttgacccccaagaccaattttgactcaatctacgctgacgtgacaccctaattgagg 8301497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 1096469 - 1096630
Alignment:
Q  185 cttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnncta-caaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||||||  | ||||        ||| |||||||||||||||||||| ||||||||| |    
T  1096469 cttaataacagttttagccccttaacttttccaaagttgcgattttggtcccctaaaaaaaaaactaacaaaaccgccctctaagtttcgcatctgtggc 1096568  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
    ||||||| |||| |  |||||||||||| | || |||||||||||| || ||||||||||||    
T  1096569 agttttggcccctagggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggt 1096630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 46912427 - 46912332
Alignment:
Q  259 ccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||| |||||||||||||| || |||||||| |||| |||| |||||||||| | ||||||||||||||| |||||||| ||||||| ||||||||    
T  46912427 ccctttaagttttgcatctatggcagttttggcccctaatgccaattttgactctgtttacgctgacgtggcaccctaaatgaggtgccacgtgtt 46912332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 39642455 - 39642349
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||| |||| |||||||| ||||||| | |||||||||| | || || ||||||| | |||||||||||| ||| |    
T  39642455 ctacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagccaattttgactcggtctatgctgacgcggcaccctaagtgaagtgcc 39642356  T
Q  348 acgtgtt 354  Q
    |||||||    
T  39642355 acgtgtt 39642349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 44672380 - 44672555
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| ||||||||||||| |||| |||||||| | |||||  ||||||||||  | || |||||||||||| |||||||||||| ||| ||    
T  44672380 tacaaaaccgccccctaagttttgcatatgtggcagttttggcgcccaagatcaattttgattcggtctacgctgacgtggcaccctaagtgaagtgcca 44672479  T
Q  349 cgtgttannnnnnnnnnnnnnnnnnatcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgatttt 434  Q
    |||||||                  | ||||||||||||||||| |||||||||||||||||||| |||| || ||||||||||||    
T  44672480 cgtgttatttttttt----------accaaaaattgaccttggggggccaaaactgctacagttgaaaaatttgtggggcgatttt 44672555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 16298294 - 16298197
Alignment:
Q  258 gccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| ||| |||||||||||||| |||||||| | |||||| |||||||||||   || |||||||||||||||| |||||||||||| |||||||||    
T  16298294 gccccctatgttttgcatctgtggcagttttggctcccaatatcaattttgacttggtctacgctgacgtgacactctaagtgaggtgccacgtgtta 16298197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 17760682 - 17760858
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn---ctacaaaaccgccctctaagttttgcatctg 278  Q
    ||||||||||||| |||| |||| ||||||  ||||||||||||||||||| | |||||          |||||||||| ||| ||||||||||||| ||    
T  17760682 ggcttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaaaaaaactacaaaaccaccccctaagttttgcatatg 17760781  T
Q  279 tgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    || |||||||| || ||||  ||||||||||| | || ||| |||||||| |||||||| ||||||| |||||||||    
T  17760782 tggcagttttggccaccaagatcaattttgactcggtctacactgacgtggcaccctaaatgaggtgccacgtgtta 17760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 252 - 355
Target Start/End: Original strand, 25486285 - 25486387
Alignment:
Q  252 aaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||| |||||||||||||||||||||||| | |||||| |||| ||  ||||||||||| | || |||||||||||| |||||||| ||||||| |||||    
T  25486285 aaaatcgccctctaagttttgcatctgtggc-gttttggcccctaagttcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgccacgt 25486383  T
Q  352 gtta 355  Q
    ||||    
T  25486384 gtta 25486387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 30849477 - 30849370
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| || ||||||||||||||||||| ||||||| ||| ||| | ||||||| ||   || || |||||||| ||||||||||||||||| |    
T  30849477 ctacaaaaccgtcccctaagttttgcatctgtgatagttttggcccacaaggccaattttaacttggtctatgctgacgtaacaccctaagtgaggtgcc 30849378  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  30849377 acgtgtta 30849370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 48319490 - 48319577
Alignment:
Q  268 ttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |  |  ||||||||||| || ||||||||||||| |||||||||    
T  48319490 ttttgcatctatgacagttttgacccccaaggtcaattttgactctatcaacgctgacgtggcatcctaagtgaggtgccacgtgtta 48319577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 202 - 355
Target Start/End: Complemental strand, 49426284 - 49426133
Alignment:
Q  202 cccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtc 301  Q
    |||||||||||| ||||||||||||||| || |||||||       ||||||||| |  |  |||||||||||| |||| |||||||| |||| |||| |    
T  49426284 cccctaacttttccaaagttgcgattttagccctctaagaaaaaa-ctacaaaactgttccttaagttttgcatttgtggcagttttggcccc-aatgcc 49426187  T
Q  302 aattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||   || ||||||||||||||||||||||| ||||| |||||||||    
T  49426186 aattttgacttggtctacgctgacgtgacaccctaagtaaggtgtcacgtgtta 49426133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 50226638 - 50226531
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||| |||||||||||||||||||||| ||||  |||||||| |||| || |  ||| ||||| | || |||||||||||| |||||||||||||||| |    
T  50226638 ctactaaaccgccctctaagttttgcacctgtagcagttttggccccgaaggctaatattgactcggtctacgctgacgtggcaccctaagtgaggtgcc 50226539  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  50226538 acgtgtta 50226531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 50401438 - 50401540
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||| |||||||||||||  |||||| | |||||||||| | || ||| ||||||||||||| ||| ||||||| |    
T  50401438 ctacaaaaccgccccctaagttttgcatttgtgacagttttg-gccccaaggccaattttgactcggtctactctgacgtgacaccttaaatgaggtgcc 50401536  T
Q  348 acgt 351  Q
    ||||    
T  50401537 acgt 50401540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 41997873 - 41997791
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||| |||||||||||| |||||||| || |||| | |||||||||| | || |||||||||||||||||||||||||||||    
T  41997873 ctaagctttgcatctgtggcagttttggcctccaaggccaattttgactcggtctacgctgacgtgacaccctaagtgaggtg 41997791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 186 - 343
Target Start/End: Original strand, 17692730 - 17692887
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||| |||||||||| ||||||| ||||||||| |||||| || | |||||        ||||||| |||||  |||||||||||| |||| | |    
T  17692730 ttaatagcaattttaaccccctaactttctcaaagttgtgattttagccccctaagaaaaaaaatacaaaatcgccccttaagttttgcatttgtggcgg 17692829  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgagg 343  Q
    |||| | |||||| | || ||||||| |||| |||||||||||||||||||||||||||    
T  17692830 ttttcatccccaaggcca-ttttgactcagtctacgctgacgtgacaccctaagtgagg 17692887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 18632382 - 18632479
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||||||  |||||||||||||||||| ||||||||||||| ||||||   ||||||||||| |  | ||||||||||| ||||||||| |||||||    
T  18632382 ctacaaaattgccctctaagttttgcatttgtgacagttttggcccccaggatcaattttgactcgatctacgctgacgtaacaccctaaatgaggtg 18632479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 23891788 - 23891727
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  23891788 caaaaattgatcttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgta 23891727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 32295267 - 32295093
Alignment:
Q  183 ggcttaatagcagttttaacccctaa-ctttttcaaagttgcgattttggcactctaagnnnnnnnct-acaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||| | | |||||        | |||||||| ||  ||||||||| ||| ||||    
T  32295267 ggcttaataggagttttagcccctaaactttttcaaagttgcgattttgaccccctaagaaaaaaaattacaaaaccaccacctaagttttacatttgtg 32295168  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| ||||||| | ||||||| || | || ||| | |||||| |||||||| ||||||| |||||||||    
T  32295167 acagttttggcccccaaagccaattttaactcggtctacccggacgtggcaccctaaatgaggtgccacgtgtta 32295093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 12961155 - 12960998
Alignment:
Q  186 ttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||    |||||       ||||||||  | || |||| ||||||| ||||| |||    
T  12961155 ttaatagcagttttagcctcctaattttttcaaagttgcgattttggtttcctaagaaaaaaactacaaaattgtcccctaaattttgcaactgtggcag 12961056  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgag 342  Q
    ||||| | || || | |||||||||| | || ||||||||||||||||||||||||||    
T  12961055 ttttggctccaaaggccaattttgactcggtctacgctgacgtgacaccctaagtgag 12960998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 14190789 - 14190686
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||  |||||| |||||||||||||||| |||||||| || |||||| |||||||||| | || |||||||| ||| ||| |||||| ||||| |    
T  14190789 ctacaaaaaggccctcgaagttttgcatctgtggcagttttggcctccaatgccaattttgactcggtctacgctgatgtggcactctaagtaaggtgcc 14190690  T
Q  348 acgt 351  Q
    ||||    
T  14190689 acgt 14190686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 25085640 - 25085533
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||| |||| | | |||||||| | ||||| |||||||| ||| |||  ||||||||||||| || ||| |||||||| |||||||||||||||| |    
T  25085640 ctacaaatccgcaccccaagttttgtacctgtggcagttttggccctcaagatcaattttgacccggtctacactgacgtggcaccctaagtgaggtgcc 25085541  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  25085540 acgtgtta 25085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 44436824 - 44436930
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||| | || ||||||||||||  ||||||||||||| ||||||| |||||||||||| |  | |||||| ||||  |||||||||||||||| |    
T  44436824 ctacaaaactgtcccctaagttttgcacttgtgacagttttg-cccccaaggtcaattttgactcgatctacgcttacgtcgcaccctaagtgaggtgcc 44436922  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  44436923 acgtgtta 44436930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 45739123 - 45739182
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||  |||||||    
T  45739123 aaaattggccttggggggccaaaactgctacagttgcaaaacttatggggcagttttgta 45739182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 17760875 - 17760936
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||| |||||| |||||||    
T  17760875 caaaacttgaccttggggggccaaaactgctacaattgcaaaacttaaggggcggttttgta 17760936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 8009796 - 8009880
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacacc 333  Q
    ||||||||||| | | |||||||||||||||||||||||||||| ||||   |||||||||| |  | |||||||||||||||||    
T  8009796 tacaaaaccgctcccgaagttttgcatctgtgacagttttgaccaccaagaccaattttgactcgttctacgctgacgtgacacc 8009880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 14978797 - 14978970
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||  |  | |        ||||||||| |||| |||||||||||| |||||     
T  14978797 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttgggtccttcaaaaaaaaactacaaaactgccccctaagttttgcacctgtgg 14978896  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     ||||||| |||| || | |||||||||    || |||||||| ||| |||||||||||||||| ||| |||||    
T  14978897 tagttttggccccaaaggccaattttgaattggtctacgctgatgtggcaccctaagtgaggtgccacatgtta 14978970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 46572893 - 46572998
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| || ||||||||||||| |||| |||||| |  |||||| | ||||||||||   || |||||||| |||| ||||||||||||||| |    
T  46572893 ctacaaaaccgtcccctaagttttgcatttgtggcagtttgg--ccccaaggccaattttgacttggtctacgctgatgtgagaccctaagtgaggtgcc 46572990  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  46572991 acgtgtta 46572998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 354
Target Start/End: Original strand, 7579731 - 7579837
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||  |||| || ||||  ||||||| |  ||||||||| | || ||||||||| || |||||||||||||||| |    
T  7579731 ctacaaaaccgcccgctaagttttgcacttgtggcaatttttgcccccaaagctaattttgactcggtctacgctgacatggcaccctaagtgaggtgcc 7579830  T
Q  348 acgtgtt 354  Q
    || ||||    
T  7579831 acatgtt 7579837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 354
Target Start/End: Original strand, 23220633 - 23220739
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||||||  |||||||||||  |||| | |||||| |||||||   |||||||||  | || |||||||||||| |||||||||||||||| |    
T  23220633 ctacaaaaccgccccttaagttttgcacatgtggcggttttggcccccaagaccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcc 23220732  T
Q  348 acgtgtt 354  Q
    || ||||    
T  23220733 acatgtt 23220739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 5287887 - 5287838
Alignment:
Q  184 gcttaatagcagttttaacccct-aactttttcaaagttgcgattttggc 232  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  5287887 gcttaatagcagttttaaccccttaactttctcaaagttgcgattttggc 5287838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 16545643 - 16545724
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||||||||| ||||||||||  |||||||||  ||||||||| | || || ||||||||  ||||||||||||||||    
T  16545643 taagttttgcatctatgacagtttttgcccccaatggtaattttgactcggtctatgctgacgtagcaccctaagtgaggtg 16545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 39642329 - 39642268
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||||||||||| ||||| |||||| |||||| |||||||    
T  39642329 caaaaattggccttggggggccaaaactgctacaattgcagaacttagggggcggttttgta 39642268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 16874691 - 16874749
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||||| |||||||||| |||| |||||||||||||||||| |||||||    
T  16874691 aaaattggccttgggag-ccaaaactgccacagatgcaaaacttatggggcggttttgta 16874749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 20224773 - 20224671
Alignment:
Q  252 aaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||||| ||| ||| |||||| || |||| |||||||| ||| ||||| |||||||||| | || |||||||||||| |||||||| ||||||  |||||    
T  20224773 aaaacccccccctatgttttgtat-tgtggcagttttggccctcaatgacaattttgactctgtctacgctgacgtggcaccctaaatgaggtaccacgt 20224675  T
Q  352 gtta 355  Q
    ||||    
T  20224674 gtta 20224671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 41997750 - 41997707
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||||||||||||| |||| |||||||    
T  41997750 ggccaaaactgctacagttgcaaaacttatgaggcggttttgta 41997707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 355
Target Start/End: Complemental strand, 5287457 - 5287367
Alignment:
Q  265 aagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||| ||||   |||||| |||| || |||||||||||| | ||  ||||||||||| |||||||||||||||| || ||||||    
T  5287457 aagttttgcatatgtggatgttttggccccgaaggtcaattttgactcggtccacgctgacgtggcaccctaagtgaggtgccaagtgtta 5287367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 7060696 - 7060742
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgaccccc 295  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||    
T  7060696 tacaaaaccgccctctaagttttgcaactgtaacaattttgaccccc 7060742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 12960846 - 12960896
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggc 232  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  12960846 ggcttaataacagttttagcccgctaactttttcaaagttgcgattttggc 12960896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 46505401 - 46505311
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||||| || | ||||| || |||||||   |||||||| | | ||||||| |||||||||||||||||||||||| ||| ||||    
T  46505401 taagttttgcatttgcggcagttctggcccccaagaccaattttggctcggtttacgttgacgtgacaccctaagtgaggtgccacatgtt 46505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 46573010 - 46573064
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggc 428  Q
    |||||||||||| || ||| | ||||||||||||||||||||||||||| |||||    
T  46573010 atcaaaaattgatctcgggggaccaaaactgctacagttgcaaaacttagggggc 46573064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 51250485 - 51250535
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  51250485 ggcttaataacagttttagccccctaactttttcaaagttgcgattttggc 51250535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 3377697 - 3377758
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||| ||| || |||||||    
T  3377697 caaaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgta 3377758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 353
Target Start/End: Original strand, 6320631 - 6320733
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    |||||||||| || |||| |||||||||||||  ||||||||||||  |   |||||| ||| | || |||||||||||||||  |||||||||||| ||    
T  6320631 tacaaaaccgtcccctaaattttgcatctgtggtagttttgaccccttagaccaatttcgactcggtctacgctgacgtgaca--ctaagtgaggtgcca 6320728  T
Q  349 cgtgt 353  Q
    |||||    
T  6320729 cgtgt 6320733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 12960974 - 12960913
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||  ||||||| |||||||||||||| |||||||||||||| | |||| |||||||    
T  12960974 caaaaattagccttggggggccaaaactgctatagttgcaaaacttaggaggcggttttgta 12960913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 344
Target Start/End: Complemental strand, 6569754 - 6569658
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
    ||||||||||||||  |||||||| ||| |||| |||||||| ||| |||   |||||||||  | || |||||||||||| ||| |||||||||||    
T  6569754 ctacaaaaccgccccttaagttttacatttgtggcagttttggccctcaagaccaattttgattcggtctacgctgacgtggcactctaagtgaggt 6569658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 48319589 - 48319644
Alignment:
Q  376 caaaaattgaccttggg--aggccaaaactgctacagttgcaaaacttatggggcg 429  Q
    ||||||||| ||||| |  |||||||||||||||||||||||||||||| ||||||    
T  48319589 caaaaattggccttgagtaaggccaaaactgctacagttgcaaaacttagggggcg 48319644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 14914 - 14879
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  14914 acgctgacgtgacaccctaagtgaggtgtcacgtgt 14879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 23220757 - 23220808
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| | |||||||||||||||||| |||||||| |||||| |||||||    
T  23220757 ccttgggggaccaaaactgctacagttgtaaaacttagggggcggttttgta 23220808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 32558388 - 32558353
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  32558388 acgctgacgtgacaccctaagtgaggtgccacgtgt 32558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 33811562 - 33811597
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  33811562 acgctgacgtgacaccctaagtgaggtgccacgtgt 33811597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 34988227 - 34988262
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  34988227 acgctgacgtgacaccctaagtgaggtgccacgtgt 34988262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 1096633 - 1096695
Alignment:
Q  376 caaaaattgacctt-gggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| |||| ||| |||||||||||||||||||||||| |||| ||| || |||||||    
T  1096633 caaaaattggccttcggggggccaaaactgctacagttgcaaagcttaggggacggttttgta 1096695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 15659305 - 15659259
Alignment:
Q  186 ttaatagcagttttaa-cccctaactttttcaaagttgcgattttgg 231  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  15659305 ttaatagcagttttaagcccctaacttttccaaagttgtgattttgg 15659259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 25486397 - 25486443
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  25486397 caaaaattgactttggggggccaaaactgctatagttgtaaaactta 25486443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 27864300 - 27864255
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||    
T  27864300 caaaaattgaccttgggattc-aaaactgctacagttgcaaaactta 27864255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 50226412 - 50226442
Alignment:
Q  202 cccctaactttttcaaagttgcgattttggc 232  Q
    |||||||||||||||||||||||||||||||    
T  50226412 cccctaactttttcaaagttgcgattttggc 50226442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 50401558 - 50401603
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||    
T  50401558 caaaaattgaccttggggagccaaa-ctgctacagttgcaaaactta 50401603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 6606603 - 6606664
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    |||||||| |||||||| || ||| |||| || |||||||| ||||||| ||||||||||||    
T  6606603 tacaaaacagccctctatgtattgaatctttggcagttttggcccccaaggtcaattttgac 6606664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 15659108 - 15659056
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcg 429  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||| ||||||    
T  15659108 caaaaattggctttggg-ggccaaaactgctccagttgcaaaacttagggggcg 15659056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 18216857 - 18216820
Alignment:
Q  317 tacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  18216857 tacgctgacgtggcaccctaagtgaggtgccacgtgtt 18216820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 19893150 - 19893066
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagtttt-gacccccaatgtcaattttgacccagtttacgctgacgtgacacc 333  Q
    |||||||| |||| ||| || ||| |||| |||||||||| | |||||||||||| |||||||  ||| |||||||||||||||||    
T  19893150 tacaaaacagccc-ctatgtattggatctttgacagtttttgccccccaatgtcacttttgacttagtctacgctgacgtgacacc 19893066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 7061408 - 7061368
Alignment:
Q  315 tttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||| ||||||||||| |||| |||||||||    
T  7061408 tttacgctgacgtggcaccctaagtgcggtgccacgtgtta 7061368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 7598782 - 7598746
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  7598782 acgctgacgtggcaccctaagtgaggtgccacgtgtt 7598746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 51315798 - 51315625
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| |||| |||||||  |||||||||||||||||| | |||||        |||||||||||||| |||||||||||| |||||    
T  51315798 ggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcacctgtg 51315699  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
     |||||||| ||||||| | |||||||||| | || |||||||||||| |||||||||||||||| ||||||||    
T  51315698 gcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtt 51315625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 248 - 437
Target Start/End: Complemental strand, 44436645 - 44436456
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||| | |||||||||| | || |||||||||||| |||||||||||||||| |    
T  44436645 ctacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 44436546  T
Q  348 acgtgttannnnnnnnnnnnnnnnnnatcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||                  | || |||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  44436545 acgtgttattttttattttattttttaccacaaattggccttggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 44436456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 54719309 - 54719138
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||||   |||||       |||||||||||||| ||||||||||||| |||      
T  54719309 ggcttaatggcagttttaaccccctaacttattcaaagttgcgattttggcctcctaagaaaaaa-ctacaaaaccgccccctaagttttgcatatgtac 54719211  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||| |||| ||||||||| |||||||||| | || |||||||||||| |||||||||||||||| || |||||    
T  54719210 caggtttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccaagtgtt 54719138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 3916431 - 3916603
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||||||||||| |||||  |||||| ||||||||| | |||||        |||||||| ||| | ||||||||||||||||||     
T  3916431 ggcttaatagcagttttaacccctaaatttttttaagttgtgattttggccc-ctaagaaaaaaaactacaaaatcgctcactaagttttgcatctgtgg 3916529  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| ||||||| |||||||||||| | || ||| || ||||| |||||||||||||||| |||||||||    
T  3916530 cagttttggcccccaaagtcaattttgactcggtctacactaacgtggcaccctaagtgaggtgccacgtgtta 3916603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 44586097 - 44585926
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||||||||||| |||| |||||||  |||||||||||||||||| | |||||        |||||||||||||| ||||||||||| |||||| ||    
T  44586097 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcttctgtggca 44585998  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||| ||||||  | |||||||||| | || |||||||||||| |||||||||||||||| || ||||||    
T  44585997 gttttggcccccacggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgtta 44585926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 25843441 - 25843539
Alignment:
Q  257 cgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| |||||||||||||||||| ||||||||  |||||| | ||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||    
T  25843441 cgccccctaagttttgcatctgtggcagttttggtccccaaggccaattttgacccagtctacgctgacgtggcaccctaagcgaggtgccacgtgtta 25843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 36687823 - 36687731
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| ||||||| |||| || ||||| || ||||||||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  36687823 ctaagatttgcatttgtggcaattttggcctccaatgtcaattttgactcggtttacgctgacgtggcaccctaagtgaggtgccacgtgtta 36687731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 434
Target Start/End: Complemental strand, 44433311 - 44433126
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||| |||| |||||||| ||||||| | |||||||||||| || |||||||| ||| || ||||||| ||||| |    
T  44433311 ctacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaaggccaattttgacccggtctacgctgatgtggca-cctaagttaggtgtc 44433213  T
Q  348 acgtgttannnnnnnnnnnnnnnnnnatcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgatttt 434  Q
    ||||||||                  | ||||||||| |||||||||||||||||||||| ||||||||||| || |||||| ||||    
T  44433212 acgtgttatttttaaaaaaaaaaattaccaaaaattggccttgggaggccaaaactgctatagttgcaaaacctagggggcggtttt 44433126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 1814866 - 1814697
Alignment:
Q  184 gcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||||||||||||| || |||||||||| ||||||| |||||||||  | |||||       ||||||||||| || |||||||||||||    | |    
T  1814866 gcttaatagcagttttagcctcctaacttttccaaagtttcgattttggacccctaagaaaaaaactacaaaaccgtcccctaagttttgcat----ggc 1814771  T
Q  283 agttttgacccccaatg-tcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| ||||| | | ||||||||||| | || |||||||||||| |||||||||||||||| |||||||||    
T  1814770 agttttggccccctaagatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 1814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 1938383 - 1938490
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||||||  ||||||||||| |||||  ||||||| ||| ||| |||||||||||| | || ||||||||| || |||||||||||||||| |    
T  1938383 ctacaaaaccgccccttaagttttgcacctgtggtagttttggcccacaaagtcaattttgactcggtctacgctgacatggcaccctaagtgaggtgtc 1938482  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  1938483 acgtgtta 1938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 19404625 - 19404534
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||  ||||||||||||| ||||||| | ||||||||||  ||| |||||| |||||||||||||||||||||| |||||||||    
T  19404625 taagttttgcacatgtgacagttttggcccccaaggccaattttgacttagtctacgctaacgtgacaccctaagtgaggtgccacgtgtta 19404534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 33329864 - 33329757
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| || |||||| |||||| |||| |||||||| |||||||   |||||||||| | || |||||||||||| |||||||||||||||| |    
T  33329864 ctacaaaaccgtcccctaagtattgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 33329765  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  33329764 acgtgtta 33329757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 38177178 - 38177349
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||| ||| ||||| ||||| ||||||  |||||||||||||||||| | |||||        ||||||||| || | |||||||||||| |||||    
T  38177178 ggcttaatggcaattttagccccttaactttcccaaagttgcgattttggccccctaagaaaaaat-tacaaaaccaccttttaagttttgcatatgtga 38177276  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    || ||||| ||||||| | |||||||||| | |||| |||||||||| |||||||||||||||| ||| ||||    
T  38177277 catttttggcccccaaggccaattttgactcggtttgcgctgacgtggcaccctaagtgaggtgccacatgtt 38177349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 43747527 - 43747420
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||| | || |||||||| ||||||   ||||||||||| | || |||||||||||| || ||||||||||||| |    
T  43747527 ctacaaaaccgccccctaagttttgcatttatggcagttttggcccccacgatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcc 43747428  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  43747427 acgtgtta 43747420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 27178394 - 27178288
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||| ||| ||||||||||||||||||  ||||||||||||||||| ||||||||||   || |||||||| ||| ||||||| |||||||| |    
T  27178394 ctacaaaaccaccccctaagttttgcatctgtggtagttttgacccccaatgccaattttgacttggtctacgctgatgtgtcaccctacgtgaggtgtc 27178295  T
Q  348 acgtgtt 354  Q
    || ||||    
T  27178294 acatgtt 27178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 263 - 437
Target Start/End: Complemental strand, 14856788 - 14856614
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgttannnnnnn 362  Q
    |||| |||||||  |||| |||||||| |||||||||||||||||||  | || ||||||||||||||||| ||||||| ||| |||||||||           
T  14856788 ctaaattttgcacatgtgccagttttggcccccaatgtcaattttgattcggtctacgctgacgtgacaccttaagtgatgtgccacgtgttatttttat 14856689  T
Q  363 nnnnnnnnnnnatcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
               | ||||||||| | ||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  14856688 attatttttttaccaaaaattggcattggggggccaaaactactatagttgcaaaacttatggggcgattttgta 14856614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 20432497 - 20432324
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttg-catctgtg 280  Q
    |||||||||||| |||||||||| ||||||||  ||||||| ||||||||  | |||||       |||||||| | ||| |||||||||  ||||||||    
T  20432497 ggcttaatagcatttttaaccccctaacttttcaaaagttgtgattttggtcccctaagaaaaaa-ctacaaaatcaccccctaagtttttacatctgtg 20432399  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     |||||||||||||||| | ||||||||||   || |||||||||||  |||||||||||||||| |||||||||    
T  20432398 gcagttttgacccccaaggacaattttgacttggtctacgctgacgtagcaccctaagtgaggtgccacgtgtta 20432324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 47189841 - 47189734
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||| |  |||||||||||| |||| |||||||||||| |||  |||||||||||   || ||| ||||||||||||| ||||||||||| |    
T  47189841 ctacaaaaccgctccataagttttgcatttgtggcagttttgaccctcaagatcaattttgacttcgtctacactgacgtgacaccttaagtgaggtgtc 47189742  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  47189741 acgtgtta 47189734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 54464229 - 54464324
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgagg 343  Q
    ||||||||| | || ||||||||||||| |||| |||||||||||||||| |||||||||||| | || |||||| ||||| |||| |||||||||    
T  54464229 ctacaaaactgtcccctaagttttgcatatgtggcagttttgacccccaaggtcaattttgactcggtctacgctcacgtggcaccttaagtgagg 54464324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 310
Target Start/End: Original strand, 38957845 - 38957975
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgt 279  Q
    |||||||||||||||||| || ||||| ||||| ||||||||||||||||| || ||||         |||||||||||||| ||||||||||||| |||    
T  38957845 ggcttaatagcagttttagcctcctaatttttttaaagttgcgattttggccctttaagaaaaaaaaactacaaaaccgccccctaagttttgcatttgt 38957944  T
Q  280 gacagttttgacccccaatgtcaattttgac 310  Q
    | |||||||| ||||||| | ||||||||||    
T  38957945 ggcagttttggcccccaaggccaattttgac 38957975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 46226765 - 46226871
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||| ||| ||| ||| |||||||| ||||| |||||||| ||||| ||| ||||||| || | || |||||||||||| |||||||||||||||| ||    
T  46226765 tacaataccaccccctatgttttgcacctgtggcagttttggcccccgatgccaattttaactcggtatacgctgacgtggcaccctaagtgaggtgcca 46226864  T
Q  349 cgtgtta 355  Q
    |||||||    
T  46226865 cgtgtta 46226871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 48348569 - 48348400
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||| ||||||| |||| ||||||||| ||||||||||||||||  || ||||        |||||||| |||||  |||||||||||| |||| ||    
T  48348569 ttaatagtagttttatccccctaacttttttaaagttgcgattttggtcctttaagaaaaataactacaaaatcgccccttaagttttgcatatgtggca 48348470  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||||||||||| ||   |||||||||| | || |||||||||||| ||| |||||||||||| ||||||||    
T  48348469 gttttgacccc-aagcccaattttgactcggtctacgctgacgtggcacgctaagtgaggtgccacgtgtt 48348400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 7218383 - 7218291
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| |||||||| |||||||| ||||||| ||||||||||||    | || |||||||||||||| ||||||||||| |||||||||    
T  7218383 ctaagttttacatctgtggcagttttggcccccaaggtcaattttgacttgatctatgctgacgtgacaccttaagtgaggtgccacgtgtta 7218291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 36677743 - 36677651
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| ||||||| |||| || ||||| || |||| |||||||||||| | ||||||||||||||| |||| ||||||||||| |||||||||    
T  36677743 ctaagatttgcatttgtggcaattttggcctccaaggtcaattttgactcggtttacgctgacgtggcaccttaagtgaggtgccacgtgtta 36677651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 28712521 - 28712628
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| ||||| |||||||||||||||||  |||||||  | ||||| | ||| |||||| | || ||| |||||||| |||||||||||||||| |    
T  28712521 ctacaaaatcgccccctaagttttgcatctgtagcagttttagcacccaaggccaactttgactcggtctacactgacgtggcaccctaagtgaggtgcc 28712620  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  28712621 acgtgtta 28712628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 54719119 - 54719073
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  54719119 caaaaattgaccttggggggccaaaactgctacagttgcaaaactta 54719073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 14340862 - 14340801
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  14340862 caaaaattggctttgggaggccaaaactgctacaattgcaaaacttgtggggcggttttgta 14340801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 25154370 - 25154427
Alignment:
Q  380 aattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  25154370 aattggccttggggggccaaaactgctacagttgcaaaacttaaggggcggttttgta 25154427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 43747407 - 43747346
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||  |||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  43747407 caaaaattggtcttggggggccaaaactgctacaattgcaaaacttattgggcgattttgta 43747346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 44624710 - 44624797
Alignment:
Q  267 gttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||| ||||||||  ||| || | |||||||||| | || |||||||||||| ||||||||||||||||||| ||||||    
T  44624710 gttttgcatctgtggcagttttggtccc-aaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgacatgtgtta 44624797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 50802660 - 50802773
Alignment:
Q  184 gcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||||| || ||||||| |||||||| ||||||||| | |||||       |||||||||  ||| ||||||||||||  |||| |    
T  50802660 gcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaaaactacaaaactaccccctaagttttgcacatgtggc 50802759  T
Q  283 agttttgaccccca 296  Q
    ||||||||||||||    
T  50802760 agttttgaccccca 50802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 50873217 - 50873104
Alignment:
Q  184 gcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||||| || ||||||| |||||||| ||||||||| | |||||       |||||||||  ||| ||||||||||||  |||| |    
T  50873217 gcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaaaactacaaaactaccccctaagttttgcacatgtggc 50873118  T
Q  283 agttttgaccccca 296  Q
    ||||||||||||||    
T  50873117 agttttgaccccca 50873104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 52008319 - 52008418
Alignment:
Q  258 gccctctaagttttgcatctgtgacagtttt--gacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| |||||||| |||| |||||||  | |||| ||  | ||||||||| | || ||||||||||||||||||||||||||||| |||||||||    
T  52008319 gccctctaatttttgcatatgtggcagttttttggcccctaaaattaattttgactcggtctacgctgacgtgacaccctaagtgaggtgtcacgtgtta 52008418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 435
Target Start/End: Original strand, 3192967 - 3193026
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttg 435  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||| || |||||    
T  3192967 caaaaattgaccttggggggccaaaactgttacagttgcaaaacttaggggtcggttttg 3193026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 354
Target Start/End: Original strand, 35359067 - 35359169
Alignment:
Q  252 aaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||| ||||| |||| |||||||  |||| |||||||| |||| ||||||||||||||| | || |||||||||||| |||| ||||||| ||  |||||    
T  35359067 aaaatcgccccctaatttttgcacatgtggcagttttggcccctaatgtcaattttgactcggtctacgctgacgtggcaccttaagtgatgtcccacgt 35359166  T
Q  352 gtt 354  Q
    |||    
T  35359167 gtt 35359169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 791562 - 791477
Alignment:
Q  253 aaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaag 338  Q
    |||||||||  |||||||||||||||||||| ||||| ||| |||||||||||| |||    | |||||||||||| |||||||||    
T  791562 aaaccgccccataagttttgcatctgtgacacttttggccctcaatgtcaatttcgacttgatctacgctgacgtggcaccctaag 791477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 12759635 - 12759576
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  12759635 caaaaattgactttgg-aggccaaaactgctacagttgcaaaactta-ggggcggttttgta 12759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 28204606 - 28204545
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| | |||||||||||||||||| |||| ||| ||||||||||||||    
T  28204606 caaaaattggccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgta 28204545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 3192774 - 3192947
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||||    | |||||       ||||||||||| || ||||||||| || ||||       
T  3192774 ggcttaatagaagttttagcccctaactttttcaaagttgcgcttttcatcccctaaggaaaaaactacaaaaccgacccctaagtttttcaactgtagt 3192873  T
Q  283 agttttgacccc-caatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| | |||| ||| |||||||||||| | || ||| || || || |||||||||||||||| ||| |||||    
T  3192874 agtttaggcccctcaaggtcaattttgactcggtctacactaacatggcaccctaagtgaggtgccacatgtta 3192947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 437
Target Start/End: Original strand, 4474256 - 4474316
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  4474256 aaaaattggtcttggggggccaaaactgctacagttgcaaaacttagagggcggttttgta 4474316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 8024902 - 8024842
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| | ||||| |||||||||||||||||||||||||| || |||||| |||||||    
T  8024902 aaaaattggctttggggggccaaaactgctacagttgcaaaacgtagggggcggttttgta 8024842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 28712668 - 28712708
Alignment:
Q  397 caaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  28712668 caaaactgctacagttgcaaaacttagggggcgattttgta 28712708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 51315610 - 51315562
Alignment:
Q  389 tgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  51315610 tggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 51315562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 14341046 - 14340874
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||| ||||||| |  |||||||||||||||||||||||||| |  |||||        ||||||||  | || ||||||||||||| |||| |    
T  14341046 ggcttaatagtagttttaccttctaactttttcaaagttgcgattttgaccatctaaaaaaaaaactacaaaatagtcccctaagttttgcatttgtggc 14340947  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| ||||||| |  ||||||||| | || |||||| || || ||   ||||||||||| || ||||||    
T  14340946 agttttggcccccaacgctaattttgactcggtctacgctaacatggcaggttaagtgaggtgtcatgtgtta 14340874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 22494555 - 22494667
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    |||||||||| |||||||||| ||| |||| ||||||| |||||||| | | |||||       ||||||||||||||||||| |||||||| |||| ||    
T  22494555 cttaatagcaattttaaccccctaaattttccaaagttacgattttgaccccctaagaaaaaaactacaaaaccgccctctaaattttgcatttgtggca 22494654  T
Q  284 gttttgaccccca 296  Q
     ||||| ||||||    
T  22494655 attttggccccca 22494667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 49787334 - 49787397
Alignment:
Q  265 aagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtg 328  Q
    |||||||||||||||| |||||||| || |||| |||||||||||| | || ||||||||||||    
T  49787334 aagttttgcatctgtggcagttttggcctccaaagtcaattttgactcggtctacgctgacgtg 49787397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 14992843 - 14992781
Alignment:
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||| || |||| |||||||||||    
T  14992843 agttttgtcccccaaggtcaattttgactcagtctacgctgacatggcaccttaagtgaggtg 14992781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 44127661 - 44127547
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactcta--agnnnnnnnctacaaaaccgccctctaagttttgcatctgt 279  Q
    |||||||||||||||||||| | |||| ||| ||||||||||||||||||| |||||  |        |||||||| ||||| ||||| |||||| ||||    
T  44127661 ggcttaatagcagttttaactctctaattttctcaaagttgcgattttggccctctacgaaaaaaaaactacaaaatcgccccctaagctttgcaactgt 44127562  T
Q  280 gacagttttgacccc 294  Q
     ||||||||||||||    
T  44127561 aacagttttgacccc 44127547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 44624816 - 44624861
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  44624816 caaaaattgaccttgg-aggccgaaactgctacagttgcaaaactta 44624861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 4474147 - 4474231
Alignment:
Q  260 cctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||||||||||| |||| ||||||||||||| ||   |||||||||  | || ||||||||| ||||| |||||||||||||    
T  4474147 cctctaagttttgcatttgtggcagttttgacccctaagaccaattttgattcggtctacgctgacatgaca-cctaagtgaggtg 4474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 25902667 - 25902553
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaag-nnnnnnnctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||| |||||||| |||| ||||||| ||||||||||||||||||| | |||||        |||||||||||||   |||||||||||| ||||    
T  25902667 ggcttaatatcagttttagccccctaactttctcaaagttgcgattttggctccctaagaaaaaaaactacaaaaccgcctcataagttttgcatttgtg 25902568  T
Q  281 acagttttgaccccc 295  Q
     |||||||| |||||    
T  25902567 gcagttttggccccc 25902553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 38958030 - 38958091
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||  | || |||||||||||||||||||||||||| |||||| |||||||    
T  38958030 caaaaattggccttatggggtcaaaactgctacagttgcaaaacttagggggcggttttgta 38958091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 44585916 - 44585855
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||  |||||| ||| ||||||||||||||||||||| ||| |||||| |||||||    
T  44585916 caaaaattggtcttggggggcgaaaactgctacagttgcaaaatttagggggcggttttgta 44585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 36567120 - 36567016
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    |||||||| | || ||| |||||||| ||||   ||||||| ||||||| | | |||||||| | ||  ||||||||||| |||||||||||||||| ||    
T  36567120 tacaaaacagacccctatgttttgcaactgtactagttttggcccccaaggccgattttgactcggtcaacgctgacgtggcaccctaagtgaggtgcca 36567021  T
Q  349 cgtgt 353  Q
    |||||    
T  36567020 cgtgt 36567016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 341
Target Start/End: Complemental strand, 43586872 - 43586715
Alignment:
Q  184 gcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||||| ||||||| || || ||||||||||||||||||||||||||   |||||       |||||||| || |  ||| ||||||||| ||||||    
T  43586872 gcttaatagtagttttagcctcccaactttttcaaagttgcgattttggcctcctaag-aaaaaactacaaaatcgtctcctatgttttgcatttgtgac 43586774  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtga 341  Q
    |||| || ||||  ||  ||||||||||   || |||||||||||| ||||||||||||    
T  43586773 agttatggcccctgataccaattttgacttggtctacgctgacgtggcaccctaagtga 43586715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 47189707 - 47189667
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgatttt 434  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  47189707 ggccaaaactgctacagttgcaaaacttaaggggcggtttt 47189667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 86758 - 86809
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| | ||||||||||||||||||||||||||| | |||| |||||||    
T  86758 ccttgggggaccaaaactgctacagttgcaaaacttaggaggcggttttgta 86809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 14992750 - 14992691
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttg 435  Q
    ||||||||| ||||  | ||||||||||||||||||||||||||||| || ||| |||||    
T  14992750 caaaaattggccttaaggggccaaaactgctacagttgcaaaacttaaggtgcggttttg 14992691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 15978895 - 15978938
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||| |||||||||||||| |||||| |||||||    
T  15978895 ggccaaaactgctatagttgcaaaacttagggggcggttttgta 15978938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 17773288 - 17773238
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| |||||||||||| |||||||||||||||| |||||| |||||||    
T  17773288 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgta 17773238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 19074589 - 19074539
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| |||||||||||| |||||||||||||||| |||||| |||||||    
T  19074589 ccttggggggccaaaactgccacagttgcaaaactta-ggggcggttttgta 19074539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 25248692 - 25248739
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgatttt 229  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  25248692 ggcttaatagcagttttaaccctttaacttttttaaagttgcgatttt 25248739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 280
Target Start/End: Original strand, 25248758 - 25248789
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||||||||||||||||||||||||    
T  25248758 tacaaaaccgccctctaagttttgcatctgtg 25248789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 28712561 - 28712522
Alignment:
Q  398 aaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  28712561 aaaactgctacagatgcaaaacttagggggcgattttgta 28712522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 28712775 - 28712663
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||  |||| ||||||||   |||||| ||||||||| | |||||       |||||||| ||||| |||||||||||| ||||      
T  28712775 ggcttaatagcagttttcgccccctaacttttatgaagttgtgattttggccccctaagaaaaaaactacaaaatcgccccctaagttttgcaactgtag 28712676  T
Q  282 cagttttgacccc 294  Q
    |||||||||||||    
T  28712675 cagttttgacccc 28712663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 37182175 - 37182140
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  37182175 acgctgacgtgacaccctaagtgaggtgccacgtgt 37182140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 44436586 - 44436644
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||||    
T  44436586 aaaattggccttggg-ggccaaaactgccacagatgcaaaacttagggggcggttttgta 44436644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 51315672 - 51315730
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||||    
T  51315672 aaaattggccttggg-ggccaaaactgccacaggtgcaaaacttagggggcggttttgta 51315730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 53184596 - 53184682
Alignment:
Q  268 ttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| |||| |||||||| || ||||   |||||||||| | || ||||||||| ||||||||||||||| ||| |||||||||    
T  53184596 ttttgcatttgtggcagttttg-cctccaaaaccaattttgactcggtctacgctgacttgacaccctaagtgatgtgtcacgtgtta 53184682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 4474316 - 4474270
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgaccccc 295  Q
    |||||||||||||||||||||||||| ||||  |||||||| |||||    
T  4474316 tacaaaaccgccctctaagttttgcaactgtagcagttttggccccc 4474270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 25248872 - 25248918
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| || | || |||||||||||||||||||||||||||||    
T  25248872 caaaaattggccctagggggccaaaactgctacagttgcaaaactta 25248918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 38958092 - 38958046
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccc 294  Q
    |||||||||||||| |||||||||||| ||||  |||||||||||||    
T  38958092 ctacaaaaccgccccctaagttttgcaactgtagcagttttgacccc 38958046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 42230206 - 42230172
Alignment:
Q  319 cgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    ||||||||||||||||||||||||||| |||||||    
T  42230206 cgctgacgtgacaccctaagtgaggtgccacgtgt 42230172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 45744037 - 45744071
Alignment:
Q  319 cgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    ||||||||||||||||||||||||||| |||||||    
T  45744037 cgctgacgtgacaccctaagtgaggtgccacgtgt 45744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 53020633 - 53020587
Alignment:
Q  184 gcttaatagcagtttta-acccctaactttttcaaagttgcgatttt 229  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  53020633 gcttaatagcagttttagacccctaactttatcaaaattgcgatttt 53020587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 1814676 - 1814616
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| ||| |||||||||| |||||||||||||| |||| | |||||||    
T  1814676 caaaaattggccttggg-ggcaaaaactgctatagttgcaaaacttaaggggtggttttgta 1814616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 7218280 - 7218220
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||| || |||||| ||||||||||||||| |||||||||||||| | ||| ||||||||    
T  7218280 caaaaaatggccttgg-aggccaaaactgctatagttgcaaaacttaggaggcaattttgta 7218220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 231
Target Start/End: Original strand, 29512567 - 29512596
Alignment:
Q  202 cccctaactttttcaaagttgcgattttgg 231  Q
    ||||||||||||||||||||||||||||||    
T  29512567 cccctaactttttcaaagttgcgattttgg 29512596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 32508164 - 32508060
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaatt-ttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| |||| ||| ||||||  ||| |||||||||||  |||| | ||| ||| ||||| ||||  ||||||||||| |||||||||||||||| |    
T  32508164 tacaaaacagccccctatgttttgattctttgacagttttggaccccga-gtccattgttgactcagtcaacgctgacgtggcaccctaagtgaggtgcc 32508066  T
Q  348 acgtgt 353  Q
    ||||||    
T  32508065 acgtgt 32508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 35359231 - 35359182
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaa 297  Q
    |||||||| |||||||||||||||||| || || |||||||| |||||||    
T  35359231 ctacaaaatcgccctctaagttttgcaactatggcagttttggcccccaa 35359182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 38511833 - 38511796
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  38511833 acgctgacgtggcaccctaagtgaggtgccacgtgtta 38511796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 46226887 - 46226936
Alignment:
Q  388 ttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| ||| ||||||||||||||||||||| ||||||| || |||||||    
T  46226887 ttggggggctaaaactgctacagttgcaaaagttatgggacggttttgta 46226936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 334
Target Start/End: Complemental strand, 54716752 - 54716667
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccc 334  Q
    ||||||||  ||||||| || ||| |||| ||||||||||| ||||||| |||| |||||||  ||| | |||||||||| |||||    
T  54716752 tacaaaacaaccctctatgtattggatctttgacagttttggcccccaaggtcacttttgacttagtattcgctgacgtggcaccc 54716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 86655 - 86747
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||||  |||  |||||||| |||||||   |||||||||| |  | ||||||||| ||  ||||||||||||||| |||||||||    
T  86655 ctaagttttgcacttgtagcagttttggcccccaagaccaattttgactcgatctacgctgacatgggaccctaagtgaggtgccacgtgtta 86747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 10439426 - 10439458
Alignment:
Q  321 ctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    ||||||||||||||||||||||||| |||||||    
T  10439426 ctgacgtgacaccctaagtgaggtgccacgtgt 10439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 12759704 - 12759648
Alignment:
Q  299 gtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| |  | || |||||||||||||||||||||||||| ||| |||||    
T  12759704 gtcaattttgactcgatctaggctgacgtgacaccctaagtgaggtgccacatgtta 12759648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 25154495 - 25154447
Alignment:
Q  183 ggcttaatagcagttttaa-cccctaactttttcaaagttgcgattttg 230  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||    
T  25154495 ggcttaatagcagttttaaccccctaactttaccaaagttgtgattttg 25154447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 28944155 - 28944096
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| ||||||| ||||||||||||||||  ||||||||||| ||||| ||| ||||    
T  28944155 aaaaattggccttggg-ggccaaaactgctacatgtgcaaaacttagggggcaattatgta 28944096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 36677827 - 36677783
Alignment:
Q  186 ttaatagcagttttaacccctaacttttt-caaagttgcgatttt 229  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  36677827 ttaatagcagttttaccccctaaatttttccaaagttgcgatttt 36677783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 44127552 - 44127592
Alignment:
Q  397 caaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| |||||||||||| |||| ||||||||||||||    
T  44127552 caaaactgttacagttgcaaagcttagggggcgattttgta 44127592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 249 - 342
Target Start/End: Complemental strand, 46321 - 46228
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgag 342  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||||||| |||||||||||||    
T  46321 tacaaaactgccctctaagttttgcatctgtgacagttttggcccccaaggtcaattttgactcagtctacgctgacgtggcaccctaagtgag 46228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 46187 - 46144
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  46187 ggccaaaactgctacagttgcaaaacttagggggcggttttgta 46144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 36580585 - 36580415
Alignment:
Q  186 ttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||   ||  |||       |||||||||||||| ||||||||||||| |||| |||    
T  36580585 ttaatagtagttttaaccctttaactttttcaaagttgcgattttgatccttcaagaaaaaagctacaaaaccgccccctaagttttgcatttgtggcag 36580486  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| ||||||| |||||||||||| | || |||||||||||| |||||||| ||||||| |||||||||    
T  36580485 ttttggcccccaaagtcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtcacgtgtta 36580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 18504246 - 18504417
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactc-taagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| | | ||||        |||||||||||||| ||||||||||||| |||| ||    
T  18504246 ttaatagcagttttaacccctaacttttttaaagttgtgattttggcccccctaagaaaaaatactacaaaaccgccccctaagttttgcatatgtggca 18504345  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||| || | || | |||||||||| |||| |||||||||||| |||||||||||||||  |||||||||    
T  18504346 gttttggcctctaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggttccacgtgtta 18504417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 35250119 - 35250292
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||| ||||||| ||| ||||||||| |||||||||||||||||  |  ||||       ||| |||||||||||||||||||||||||| |||    
T  35250119 ggcttaatagtagttttagccctctaacttttccaaagttgcgattttggtcccttaagaaaaaaactataaaaccgccctctaagttttgcatctttga 35250218  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||  |||||| | |||||||||| | || ||| |||||||| |||| ||||||||||| |||||||||    
T  35250219 cagttttggaccccaaggccaattttgactcggtctacactgacgtggcaccttaagtgaggtgccacgtgtta 35250292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 28786071 - 28785895
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn----ctacaaaaccgccctctaagttttgcatct 277  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||||| || ||||           ||||||||| ||||  |||||||||||| |    
T  28786071 ggcttaatagcagttttaaccccataacttttccaaagttgtgattttggccct-taagaagaaaaaaaactacaaaactgccccataagttttgcattt 28785973  T
Q  278 gtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     || |||||||||||||||| |  ||||||||| | || ||||||||||||||||||||||||||||| |||||||||    
T  28785972 atggcagttttgacccccaaggctaattttgactcggtctacgctgacgtgacaccctaagtgaggtgccacgtgtta 28785895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 345
Target Start/End: Complemental strand, 17932040 - 17931880
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||||||| ||||||         ||||||| |||||||||| |||||||||||||     
T  17932040 ggcttaatagcagttttagcctcctcacttttccaaagttgcgattttggccctctaaaaaaaa---tacaaaatcgccctctaaattttgcatctgtgt 17931944  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||||||  ||| ||| |||||||||||   || |||||||||||| ||||||||||||||||    
T  17931943 cagttttggtcccaaatatcaattttgactttgtctacgctgacgtggcaccctaagtgaggtg 17931880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 41243644 - 41243816
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| |||| |||||||| ||||||||| ||||| || | |||||       |||||||||||||| ||||||||||||| ||||     
T  41243644 ggcttaatagcagttttagccccctaacttttccaaagttgcaattttagccccctaagaaaaaaactacaaaaccgccc-ctaagttttgcatttgtgg 41243742  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||   |||||| | |||||||||| | || |||| ||||||| |||||||||||||||| || ||||||    
T  41243743 cagtttttgtccccaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgtcatgtgtta 41243816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 355
Target Start/End: Complemental strand, 29834397 - 29834291
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| |||||||||||| |||||||| ||||  ||||||| |||||||| ||| | ||  |||||||||||||||||||||||||||| ||    
T  29834397 tacaaaaccgccccctaagttttgcacctgtgacaattttctcccccaaggtcaatttagactcggtccacgctgacgtgacaccctaagtgaggtgcca 29834298  T
Q  349 cgtgtta 355  Q
    | |||||    
T  29834297 catgtta 29834291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 355
Target Start/End: Complemental strand, 21505927 - 21505758
Alignment:
Q  187 taatagcagttttaa-cccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||        ||||||||| |||| ||| | ||||||| | || |||    
T  21505927 taatagcagttttagtcccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaactgccccctatgctttgcatatatggcag 21505828  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| | ||||| | || ||||||| |||| |||| |||||||||||||||||||||||| |||||||||    
T  21505827 ttttggctcccaaggcca-ttttgactcagtctacgttgacgtgacaccctaagtgaggtgtcacgtgtta 21505758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 6726501 - 6726398
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| | ||| ||||||||||||  |||| |||||||| ||||||| | |||||||||| ||||||||||||||||| |||||||||||||||| |    
T  6726501 ctacaaaatcaccccctaagttttgcacatgtggcagttttg-cccccaaggacaattttgactcagtttacgctgacgtggcaccctaagtgaggtgcc 6726403  T
Q  348 acgtg 352  Q
    |||||    
T  6726402 acgtg 6726398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 15107303 - 15107132
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| |||| ||| |||| ||||||| |||||||||| | ||||        |||||||||||| | ||||||||||||| ||||     
T  15107303 ggcttaatagcagttttacccccctaatttttccaaagttacgattttggccccctaa--aaaaaactacaaaaccgctccctaagttttgcatttgtgg 15107206  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| || |||||| |||||||||| | || ||| |||| ||| |||||||||||||||| ||| |||||    
T  15107205 cagttttggcctccaatgccaattttgactcggtctacactgatgtggcaccctaagtgaggtgccacatgtta 15107132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 18186763 - 18186591
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||||||||||| |||| |||||||| ||||||| |||||||| | | |||||         ||| ||||||| ||  ||||||||||||||||| |    
T  18186763 ttaatagcagttttagccccctaacttttccaaagttacgattttgaccccctaagaaaaaaaaactataaaaccgtcccttaagttttgcatctgtggc 18186664  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||  |||||| | |||||||||| |||| |||| ||||||| |||||||||||||||| |||| ||||    
T  18186663 agttttggtccccaaggccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgccacgggtta 18186591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 184 - 354
Target Start/End: Original strand, 28472391 - 28472560
Alignment:
Q  184 gcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| | | |||||       |||||||| |||||| |||||||||| | |||| ||    
T  28472391 gcttaatagcagttttagcccctaacttttccaaagttgcgattttgaccccctaag-aaaaaactacaaaatcgccctataagttttgcttatgtggca 28472489  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||  |||||||   |||||||||  | || |||| |||||||||||||| | ||||||| ||| ||||    
T  28472490 gttttcgcccccaagaccaattttgattcggtctacgttgacgtgacaccctgaatgaggtgccacatgtt 28472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 354
Target Start/End: Original strand, 4049775 - 4049882
Alignment:
Q  248 ctacaaaaccgccctctaagt-tttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtga 346  Q
    |||||||||||  | |||||| |||||||||||| |||||||||||| ||| | |||||||||| |  | |||||||||||| ||||||||||||||||     
T  4049775 ctacaaaaccgttccctaagtctttgcatctgtggcagttttgaccctcaaggccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgc 4049874  T
Q  347 cacgtgtt 354  Q
    ||||||||    
T  4049875 cacgtgtt 4049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 15029058 - 15029234
Alignment:
Q  183 ggcttaatagcagttttaacc----cctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatct 277  Q
    |||||||||||||||||||||    |||||||||| |||||||||||||||| | | ||||         |||||||||||||| ||||||||||||  |    
T  15029058 ggcttaatagcagttttaaccaacccctaacttttccaaagttgcgattttgaccccctaataaaaaaaactacaaaaccgccccctaagttttgcacat 15029157  T
Q  278 gtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||| |||||||| ||||||| |||||||||||| | ||  | |||||||||||||| |||||||  || |||||||||    
T  15029158 gtggcagttttggcccccaaggtcaattttgactc-gtccatgctgacgtgacaccttaagtgaaatgccacgtgtta 15029234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 36903330 - 36903436
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||| |||||||| |||||||| ||| ||| | |||||||||| | || ||||||||| || |||||||||||||||| |    
T  36903330 ctacaaaaccgccc-ctaagttttccatctgtggcagttttggccctcaaggccaattttgactcggtctacgctgacatggcaccctaagtgaggtgcc 36903428  T
Q  348 acgtgtta 355  Q
    || |||||    
T  36903429 acatgtta 36903436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 344
Target Start/End: Original strand, 15348018 - 15348113
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
    |||||||||| ||| ||||||||||||||||||  |||| || ||||||| |||||||||||| | || |||||||| ||| |||||||||||||||    
T  15348018 ctacaaaaccaccc-ctaagttttgcatctgtggaagttatggcccccaaggtcaattttgactcggtctacgctgatgtggcaccctaagtgaggt 15348113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 20184916 - 20185090
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgt 279  Q
    ||||||||| |||||||| | ||||||||||| ||||||||||||||| || | |||||         |||||||||||||   |||||||||||| |||    
T  20184916 ggcttaataacagttttagctccctaacttttccaaagttgcgattttagccccctaagaaaaaaaaactacaaaaccgcctcttaagttttgcatatgt 20185015  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    | |||||||| ||||||| |||||||||||| | || |||||||| ||  || ||||||||||||| | |||||||    
T  20185016 gccagttttggcccccaaggtcaattttgactcggtctacgctgatgtagca-cctaagtgaggtgtcgcgtgtta 20185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 336
Target Start/End: Original strand, 47909696 - 47909848
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    |||||||||||||||| |||| |||||||  ||||||||||||||| || | |||||       |||||||| ||||| |||||||||||||||||| ||    
T  47909696 cttaatagcagttttagccccctaactttcccaaagttgcgattttagccccctaagaaaaaaactacaaaatcgccccctaagttttgcatctgtggca 47909795  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacacccta 336  Q
     ||||| |   ||| |||||||||||| | || ||||||||| ||| ||||||    
T  47909796 attttggctttcaaggtcaattttgactcggtctacgctgacatgatacccta 47909848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 4049907 - 4049968
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||||||||||||||||||| |||| |||||| |||||||    
T  4049907 caaaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgta 4049968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 5172709 - 5172770
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||| |||||| |||||||    
T  5172709 caaaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgta 5172770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 437
Target Start/End: Original strand, 20185100 - 20185163
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||| | |||| |||||||    
T  20185100 atcaaaaattagccttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgta 20185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 8073957 - 8074047
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||||| |||| |||||||| ||||||| | |||||||||  | || | |||||||||| ||| |||||||||||| ||||||||    
T  8073957 taagttttgcatatgtggcagttttggcccccaaggccaattttgattcggtcttcgctgacgtggcactctaagtgaggtgccacgtgtt 8074047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 36903581 - 36903531
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36903581 ggcttaatagcagttttaaccccctaactttttcaatgttgcgattttggc 36903531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 3381929 - 3382013
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacacc 333  Q
    |||||||||||||| ||||||||||||| |||| ||||||||  |||||| || ||||||||| | || |||||||| ||||||||    
T  3381929 ctacaaaaccgccccctaagttttgcatatgtggcagttttg-gccccaaggttaattttgactcggtgtacgctgatgtgacacc 3382013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 14247614 - 14247569
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattt 228  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  14247614 ggcttaatagcagttttatcccctaacttttccaaagttgcgattt 14247569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 15348143 - 15348203
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||| |||||||    
T  15348143 caaaaattggccttggg-ggccaaaactgctacggttgcaaaacttagggggcggttttgta 15348203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 42256582 - 42256630
Alignment:
Q  183 ggcttaatagcagttttaacccc--taactttttcaaagttgcgatttt 229  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  42256582 ggcttaatagcagttttaacccccctaactttttcaaagttgcgatttt 42256630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 12905839 - 12905791
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttgg 231  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  12905839 ggcttaatagtagttttggcccctaactttttcaaagttgcgattttgg 12905791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 18186567 - 18186507
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| | |||| |||||||    
T  18186567 aaaaattgatcttgagaggccaaaactgctatagttgcaaaacttaggaggcggttttgta 18186507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 35250305 - 35250357
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggc 428  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||| |||||    
T  35250305 caaaaattggtcttggggggccaaaactgctacagttgcaaaacttagggggc 35250357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 45717978 - 45718046
Alignment:
Q  261 ctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtga 329  Q
    |||||||||||||||||||| ||||||||||||| ||  ||||||||||| | || |||| ||||||||    
T  45717978 ctctaagttttgcatctgtgtcagttttgacccctaagatcaattttgactcggtctacgttgacgtga 45718046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 28472574 - 28472624
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  28472574 ccttggggggccaaaactgctacagttgcaaaactta-ggggcggttttgta 28472624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 18504426 - 18504472
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||    
T  18504426 caaaaattggcattgggaggccaaaactgctacaattgcaaaactta 18504472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 28350436 - 28350307
Alignment:
Q  202 cccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtc 301  Q
    |||||||||||  | ||||||||| |||||| | |||||       |||||||||||||| |||||||||||| ||||| ||||||||  |||||| | |    
T  28350436 cccctaactttcacgaagttgcgactttggccccctaagaaaaaaactacaaaaccgccc-ctaagttttgcacctgtggcagttttg-gccccaaggcc 28350339  T
Q  302 aattttgacccagtttacgctgacgtgacacc 333  Q
    ||||||||| | || |||||| ||||||||||    
T  28350338 aattttgactctgtctacgctaacgtgacacc 28350307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 36580401 - 36580341
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  36580401 caaaaattggccttggt-ggccaaaactgctacagttgcaaaacttaggggacggttttgta 36580341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 310
Target Start/End: Original strand, 28350116 - 28350245
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| |||| |||||||  | ||||| |||||||||| | |||||        |||||||||||||| |||||||||||  |||||    
T  28350116 ggcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcccctgtg 28350215  T
Q  281 acagttttgacccccaatgtcaattttgac 310  Q
     |||||||| |||||||   ||||||||||    
T  28350216 gcagttttggcccccaagaccaattttgac 28350245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 10097665 - 10097623
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  10097665 ggccaaaactgctacaattgcaaaactta-ggggcgattttgta 10097623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 14247404 - 14247361
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||    
T  14247404 ggccaaaactgccacaattgcaaaacttatggggcggttttgta 14247361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 15029187 - 15029129
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||| |||||||||||| |||  ||||||||||| |||||| |||||||    
T  15029187 aaaattgaccttggg-ggccaaaactgccacatgtgcaaaacttagggggcggttttgta 15029129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 16879373 - 16879408
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  16879373 acgctgacgtgacaccctaagtgaggtgccacgtgt 16879408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 19645003 - 19645034
Alignment:
Q  391 ggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||||||||||||||||||||||||    
T  19645003 ggaggccaaaactgctacagttgcaaaactta 19645034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 20505147 - 20505226
Alignment:
Q  258 gccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaa 337  Q
    |||| |||||||||||||||| ||| |||||   | |||| |||||||||||| | || |||||||||||| ||||||||    
T  20505147 gccccctaagttttgcatctgcgacggttttagactccaaggtcaattttgactcggtctacgctgacgtggcaccctaa 20505226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 38879286 - 38879333
Alignment:
Q  306 ttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||||    
T  38879286 ttgacccagtcaacgctgacgtggcaccctaagtgaggtgtcacgtgt 38879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 41243846 - 41243889
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| ||||||||||||||||||  |||||||||||||    
T  41243846 ggccaaaactactacagttgcaaaacttagtgggcgattttgta 41243889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 45697599 - 45697560
Alignment:
Q  398 aaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  45697599 aaaactgctacagttgcaaaatttatggggcaattttgta 45697560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 6792107 - 6792061
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttgg 231  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||    
T  6792107 ttaatagcagttttagccccctaacttttccaaagttgcgattttgg 6792061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 3318318 - 3318367
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttgg 231  Q
    |||||||||| ||||||| ||||| ||||||| |||||||||||||||||    
T  3318318 ggcttaataggagttttagccccttaacttttccaaagttgcgattttgg 3318367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 3319179 - 3319216
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  3319179 acgctgacgtggcaccctaagtgaggtgccacgtgtta 3319216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 5172588 - 5172685
Alignment:
Q  258 gccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||||||||||||||| |||||||  | |||||   ||||| |||| | || |||| |||| |  |||||||||||||||| || ||||||    
T  5172588 gccctctaagttttgcatctgtggcagttttagctcccaaaaccaattatgactcggtctacgttgacattgcaccctaagtgaggtgccatgtgtta 5172685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 15107120 - 15107060
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||  |||||| |||||||||||||| |||||||||||||| ||| | ||||||||    
T  15107120 caaaaattgggcttggg-ggccaaaactgctatagttgcaaaacttaagggacaattttgta 15107060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 19644885 - 19644966
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||| || ||||  |||||||| || ||||   ||||||| ||||||| |||||||||||| |||| |||||||||||    
T  19644885 taagttttacaactgtagcagttttggcctccaagaccaattttaacccagtctacgctgacgtggcaccgtaagtgaggtg 19644966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 23826106 - 23826175
Alignment:
Q  268 ttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaa 337  Q
    |||||||| |||| |||||||| |||||||  ||||||||||  | || |||||||||||||| ||||||    
T  23826106 ttttgcatttgtggcagttttggcccccaagatcaattttgattcggtctacgctgacgtgacgccctaa 23826175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 28785886 - 28785825
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| |||| |  |||||||||| | |||||||||||||||| |||||| |||||||    
T  28785886 caaaaattggcctttgtgggccaaaactacaacagttgcaaaacttagggggcggttttgta 28785825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 334
Target Start/End: Complemental strand, 36801846 - 36801761
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccc 334  Q
    ||||||||  ||| ||| || ||| |||| || ||||||||||||||||||||| |||||||  ||| | |||||||||| |||||    
T  36801846 tacaaaacaaccccctatgtattggatctttggcagttttgacccccaatgtcacttttgacttagtcttcgctgacgtggcaccc 36801761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 40872295 - 40872234
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| | ||||  |||| |||||||||||||| ||||||||||||| || |||||||    
T  40872295 caaaaattggcattggagggcctaaactgctacagttacaaaacttatgggacggttttgta 40872234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 3247376 - 3247420
Alignment:
Q  393 aggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||||||||||||| ||| | |||| |||||||    
T  3247376 aggccaaaactgctacagttgcaaaatttaggaggcggttttgta 3247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 4050035 - 4049922
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||  ||||| ||||||  | |||||| ||||||||| | |||||       |||||||||||||| ||||| |||||| ||||      
T  4050035 ggcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgccccctaaggtttgcaactgtag 4049936  T
Q  282 cagttttgaccccc 295  Q
    |||||||| |||||    
T  4049935 cagttttggccccc 4049922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 8662825 - 8662861
Alignment:
Q  401 actgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||||||||||  |||||||    
T  8662825 actgctacagttgcaaaacttatggggctgttttgta 8662861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 419
Target Start/End: Complemental strand, 11373974 - 11373933
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaac 419  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  11373974 caaaaattggccttgggaggccaaa--tgctacagttgcaaaac 11373933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Original strand, 17876361 - 17876389
Alignment:
Q  394 ggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||||||||||||||||    
T  17876361 ggccaaaactgctacagttgcaaaactta 17876389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 25987099 - 25987063
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  25987099 acgctgacgtggcaccctaagtgaggtgccacgtgtt 25987063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 36903459 - 36903502
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||    
T  36903459 aaaattggccttggg-ggctaaaactgctacagttgcaaaactta 36903502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 27904797 - 27904623
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| |  ||||        |||||||||||||| ||||||||||||  ||||    
T  27904797 ggcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgccccctaagttttgcacttgtg 27904698  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     |||||||| |||||||   |||||||||| | || |||||||||||| |||||||||||||||| |||||||||    
T  27904697 gcagttttgtcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 27904623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 183 - 437
Target Start/End: Complemental strand, 32392033 - 32391786
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || | |||||        ||||||||||||||  |||||||||||| ||||    
T  32392033 ggcttaatagctgttttaactccctaactttttcaaagttgcgattttagccccctaagaaaaaaaactacaaaaccgccccttaagttttgcatgtgtg 32391934  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgttannnnnnnnnnnnnnnnnnatcaaaa 380  Q
    |||||||||||  ||||   |||||||||| | || |||||||||||| |||||||||||||||| ||| |||||                  | |||||    
T  32391933 acagttttgacatccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacatgtta---------tttttttctaccaaaa 32391843  T
Q  381 attgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  32391842 attggccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgta 32391786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 12406354 - 12406180
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgt 279  Q
    |||||||||||| ||||| |||| ||||||||||||||||| ||||||||| | |||||         | |||||||||||| ||||||||| |||||||    
T  12406354 ggcttaatagcaattttagccccctaactttttcaaagttgagattttggccc-ctaagaaaaaaaaacaacaaaaccgccccctaagttttacatctgt 12406256  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    | |||||||| ||||||| | |||||||||| |||| |||||||||||| |||||||||||||||| |||||||||    
T  12406255 ggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 12406180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 3334015 - 3333841
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||| ||||||| |||| |||||||| |||||||||||||||||| | |||||        |||||||||||| |  |||||||||||| ||||    
T  3334015 ggcttaatagtagttttagccccctaacttttccaaagttgcgattttggccccctaagaagaaaaactacaaaaccgctccataagttttgcatatgtg 3333916  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     |||||||| ||||||| |||||||||||| | || |||||||||||| |||||||||||||||| || ||||||    
T  3333915 gcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgtta 3333841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 345
Target Start/End: Original strand, 2974702 - 2974797
Alignment:
Q  250 acaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||| | || |||||||||||| ||||||||||||||||    
T  2974702 acaaaaccgccccctaagttttgcatctgtggcagttttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 2974797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 25910721 - 25910897
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnn----ctacaaaaccgccctctaagttttgcatctg 278  Q
    ||||||||| |||||||| ||||||||||| | ||||||| ||||||||| | |||||           |||||||||| |||||||| ||||||| |||    
T  25910721 ggcttaataacagttttaccccctaactttcttaaagttgtgattttggccccctaagaaaaacaaaaactacaaaaccaccctctaaattttgcacctg 25910820  T
Q  279 tgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    || |||||||| ||||||| |||||||||||| | || |||||||||||| |||||||||||||||| ||| |||||    
T  25910821 tggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtcacatgtta 25910897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 18402989 - 18403157
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||| ||||||||||||||| |||||||||||||  |||||||| |||||||         |||||||| | | | ||||||||||||||| || ||    
T  18402989 ttaatagtagttttaacccctaattttttcaaagttgtaattttggccctctaagaaaaaaaaactacaaaatcactccctaagttttgcatctctggca 18403088  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtg 352  Q
    ||||||||||||||   |||||||||| |||| |||| ||||||| |||||||||||||||| ||||||    
T  18403089 gttttgacccccaagaccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgtcacgtg 18403157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 35166297 - 35166469
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||| ||  |||||||| |||| ||||||||||| | | |||||       |||||||| ||||| ||||||||||||  |||| |    
T  35166297 ggcttaatagcagttttagcctttaacttttccaaaattgcgattttgaccccctaagaaaaaaactacaaaatcgccccctaagttttgcacatgtggc 35166396  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     |||||| ||  |||||||||||||||| | || ||||||||| ||||||||||||||||||| ||| |||||    
T  35166397 ggttttggccttcaatgtcaattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgtta 35166469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 43098337 - 43098167
Alignment:
Q  184 gcttaatagcagttttaa-cccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| || | ||||        |||||||||||| | |||||||||||| ||||  |    
T  43098337 gcttaatagcagttttagtcccctaactttttcaaagttacgatttttgccccctaa-aaaaaaactacaaaaccgcgc-ctaagttttgcacctgtagc 43098240  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| ||||| || ||||||||||| |||| |||||||||||| |||||||||||||||| | |||||||    
T  43098239 agttttggcccccgatatcaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccgcgtgtta 43098167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 40276276 - 40276170
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| || ||||||||||||| |||| || ||||||||||||| |  ||||||||||| || ||||||||||||||||||||||||||||| |    
T  40276276 ctacaaaaccgtcccctaagttttgcatatgtggcaattttgacccccaaggctaattttgacccggtctacgctgacgtgacaccctaagtgaggtgcc 40276177  T
Q  348 acgtgtt 354  Q
    || ||||    
T  40276176 acatgtt 40276170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 31080480 - 31080650
Alignment:
Q  186 ttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    |||||| |||||||| ||| ||||||||| |||||||||||||||| |   ||||        |||||||||| ||| |||||||||||||||||| |||    
T  31080480 ttaatatcagttttagccctctaacttttccaaagttgcgattttgacctcctaaaaaaaaaactacaaaaccaccccctaagttttgcatctgtggcag 31080579  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| ||||||| | ||||||| || | || || ||||||||| |||||||||||||||| |||||||||    
T  31080580 ttttggcccccaaggccaattttaactcggtctatgctgacgtggcaccctaagtgaggtgccacgtgtta 31080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 9852853 - 9852960
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| ||||| |||||||||||||||||| |||||||| | ||||| | ||||||||||    | |||||||||||| |||||||||||||||| |    
T  9852853 ctacaaaatcgccccctaagttttgcatctgtggcagttttggctcccaaggccaattttgacttgatctacgctgacgtggcaccctaagtgaggtgcc 9852952  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  9852953 acgtgtta 9852960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 19131747 - 19131661
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccc 334  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| || | |||||||||| | || |||||||||||| |||||    
T  19131747 ctacaaaaccgccccctaagttttgcatctgtgacagttttggccccgaaggccaattttgactcggtctacgctgacgtggcaccc 19131661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 19340889 - 19340828
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  19340889 caaaaattgatcttggggggccaaaactgctacagttgcaaaacttagggggcgattttgta 19340828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 22300601 - 22300774
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||| ||||||| ||| |||||||||  ||||||||||||||||||| ||||        ||||||||||| ||  ||||||||| || ||||     
T  22300601 ggcttaatagtagttttagccctctaacttttctaaagttgcgattttggcaccctaaaaaaaaaactacaaaaccgtcccttaagttttgtatatgtgg 22300700  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||  ||||   |||||||||| | || |||| ||||||| |||||||||||||||| ||| |||||    
T  22300701 cagttttgacttccaagaccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgccacatgtta 22300774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 26563075 - 26563162
Alignment:
Q  268 ttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||||| || ||||| ||||||| |||||||||||| | |||| |||||||||| ||||||| |||||||| |||||||||    
T  26563075 ttttgcatctgtggcaattttggcccccaaggtcaattttgactcggtttccgctgacgtggcaccctacgtgaggtgccacgtgtta 26563162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 36798170 - 36798344
Alignment:
Q  183 ggcttaatagcagtttta-acccctaactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgt 279  Q
    |||||||||||||||||| |||| |||||||| ||||||||| |||||||| | |||||         |||||||||| ||| |||||||||||||||||    
T  36798170 ggcttaatagcagttttagacccttaacttttccaaagttgcaattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttgcatctgt 36798269  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    | |||||||| ||||||| | | | |||||| | || ||| |||||||| ||| |||||||||||| ||| |||||    
T  36798270 ggcagttttggcccccaa-gaccaatttgactcggtctacactgacgtggcactctaagtgaggtgccacatgtta 36798344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 343
Target Start/End: Complemental strand, 37898029 - 37897870
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaag-nnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||        |||||||||||||| ||||||||||||| |||| |    
T  37898029 cttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccc-ctaagttttgcatatgtggc 37897931  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgagg 343  Q
    ||||||| || ||||   |||||||||| | || || ||||||||  |||| |||||||||    
T  37897930 agttttggcctccaagaccaattttgactcggtctatgctgacgtagcaccttaagtgagg 37897870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 20512264 - 20512370
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    |||||||| |||| |||||||||||| |||||  |||||||||||||||   |||||||||| | || |||||| || || |||||||||||||||| ||    
T  20512264 tacaaaactgccccctaagttttgcacctgtggtagttttgacccccaagaccaattttgactcggtctacgctaacatggcaccctaagtgaggtgcca 20512363  T
Q  349 cgtgtta 355  Q
    |||||||    
T  20512364 cgtgtta 20512370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 20630057 - 20629884
Alignment:
Q  185 cttaatagcagttttaacc--cctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||| ||  |||||||||| |||||||| ||||||||| |  ||||        |||||||||||||| ||||||||||||| ||||     
T  20630057 cttaatagcagttttagcctccctaacttttccaaagttgtgattttggccccttaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtgg 20629958  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     ||||||| || |||    |||||||||| |  | |||||||||||| |||||||||||||||| |||||||||    
T  20629957 aagttttggcctccaggaccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgtta 20629884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 40276147 - 40276086
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  40276147 caaaaattggccttggggggccaaaactgctacagttgcaaaacttaggggacgattttgta 40276086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 345
Target Start/End: Original strand, 25363825 - 25363989
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaag--nnnnnnnctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||||   |||||          |||||||| | || ||||||||||||  ||||    
T  25363825 ggcttaatagcagttttagcccctaacttttttaaagttgtgattttggcctcctaagaaaaaaaagttacaaaactgtcccctaagttttgcaattgtg 25363924  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
      ||||||| |||| || |||||||||||  | || ||||||||||||||||||||| |||||||    
T  25363925 gtagttttggccccaaaagtcaattttgattcggtctacgctgacgtgacaccctaaatgaggtg 25363989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 28446087 - 28446178
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| |||||||| |||| |||| || | |||||||||| | || ||||||||| |||||||||| |||||||| |||||||||    
T  28446087 taagttttgcatttgtgacagctttggcccctaaggccaattttgactcggtatacgctgacctgacaccctacgtgaggtgtcacgtgtta 28446178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 21066525 - 21066586
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  21066525 caaaaattggccttggggggccaaaactgctacagttgcaaaacttaaggagcggttttgta 21066586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 30604334 - 30604237
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||||||||| |||||||||||| ||||| ||||||||  ||   | | |||||||||| | || |||||||||||| ||||||||||||||||    
T  30604334 ctacaaaaccgccccctaagttttgcacctgtggcagttttgcacctgtaggccaattttgactctgtctacgctgacgtggcaccctaagtgaggtg 30604237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 6130383 - 6130337
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6130383 caaaaattggccttggggggccaaaactgctacagttgcaaaactta 6130337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 16132812 - 16132918
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| |||||||||||| || || ||||||||  |||||| | ||||||||||   || |||||||| ||| || ||||||||||||| ||    
T  16132812 tacaaaaccgccccctaagttttgcacctatggcagttttggtccccaaggccaattttgactttgtctacgctgatgtggcatcctaagtgaggtgcca 16132911  T
Q  349 cgtgtta 355  Q
     ||||||    
T  16132912 tgtgtta 16132918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 24405493 - 24405659
Alignment:
Q  186 ttaatagcagttttaa-cccctaactttttcaaagttgcgattttggcactctaag-nnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| | | || ||        |||||||||||||  ||||||||||||||| || ||    
T  24405493 ttaatagcagttttagtcccctaactttttcaaagttgcgattttgactccctgagaaaaaaaactacaaaaccgccaactaagttttgcatctttggca 24405592  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    ||||||  |||||  | |||||||||| | || || ||| ||||| | |||||||||||||| |||||    
T  24405593 gttttg-gccccatggccaattttgactcggtctatgctaacgtggctccctaagtgaggtgccacgt 24405659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 26702504 - 26702609
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| | ||||||||||| |||| |||||||| |||||||   |||||||||  | || ||  |||||||| |||||||||||||||| ||    
T  26702504 tacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcca 26702602  T
Q  349 cgtgtta 355  Q
    |||||||    
T  26702603 cgtgtta 26702609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 26972237 - 26972342
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| | ||||||||||| |||| |||||||| |||||||   |||||||||  | || ||  |||||||| |||||||||||||||| ||    
T  26972237 tacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcca 26972335  T
Q  349 cgtgtta 355  Q
    |||||||    
T  26972336 cgtgtta 26972342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 36798362 - 36798420
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttg 435  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  36798362 aaaaattggctttggggggccaaaactgctacagttgcaaaacttagggggcggttttg 36798420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 3999214 - 3999153
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||||||  | ||||||||||    
T  3999214 caaaaattggccttgaggggccaaaactgctacagttgcaaaacttataagtcgattttgta 3999153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 12406041 - 12406154
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaag-nnnnnnnctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| |||| |||||||  |||||||||||||||||| | |||||        |||||||||||||| |||||||||||| ||||     
T  12406041 ggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaagaaaactacaaaaccgccccctaagttttgcaactgt- 12406139  T
Q  281 acagttttgaccccc 295  Q
    ||||||||| |||||    
T  12406140 acagttttggccccc 12406154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 12406169 - 12406109
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||| |||||| |||||||    
T  12406169 caaaaattggccttggggggccaaaactg-tacagttgcaaaacttagggggcggttttgta 12406109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 28446190 - 28446250
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||| || |||||||    
T  28446190 caaaaattgatcttggg-ggccaaaactgctacagttgcaaaacttaggggacggttttgta 28446250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 3999330 - 3999238
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| ||| |||| |||||||| ||||||| | ||||||||||   || |||||||||||| |||| ||||||||||| ||| |||||    
T  3999330 ctaagttttacatatgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccttaagtgaggtgccacatgtta 3999238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 19340996 - 19340904
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||||||| |||||||   |||||| | |||||||||| | ||  ||| ||||||| |||||||| ||||||| |||||||||    
T  19340996 ctaagttttgcatctgtggcagttttagtccccaaagccaattttgactcggtcaacgttgacgtggcaccctaaatgaggtgccacgtgtta 19340904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 9852912 - 9852854
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||    
T  9852912 aaaattggccttgggag-ccaaaactgccacagatgcaaaacttagggggcgattttgta 9852854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 9852969 - 9853023
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcg 429  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||    
T  9852969 atcaaaaattgactttggg-ggccaaaactgatacagttgcaaaacttagggggcg 9853023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 30603731 - 30603680
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| ||||||||||||||||||||||||||||| |||||  |||||||    
T  30603731 ccttggggggccaaaactgctacagttgcaaaacttagggggcagttttgta 30603680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 3333820 - 3333774
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  3333820 caaaaattggccttggggggccaaaactgctacatttgcaaaactta 3333774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 22300797 - 22300843
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||    
T  22300797 caaaaattggccttggagggccaaaactgctacagttgcaaaactta 22300843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 2974818 - 2974871
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcg 429  Q
    ||||||||| |||| || ||||||||||||||||| ||||||||||| ||||||    
T  2974818 caaaaattggccttagggggccaaaactgctacaggtgcaaaacttagggggcg 2974871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 20512396 - 20512445
Alignment:
Q  388 ttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  20512396 ttggggggccaaaactgctaaagttgcaaaacttagagggcgattttgta 20512445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 31080666 - 31080726
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| |||| |||||| |||||||||||||||||||||||||  ||||| |||||||    
T  31080666 caaaaattggccttaggaggc-aaaactgctacagttgcaaaacttagagggcggttttgta 31080726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 36798490 - 36798441
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttgg 231  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  36798490 ggcttaatagcagttttagccccctaactttctcaaagttgcgattttgg 36798441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 24779276 - 24779447
Alignment:
Q  184 gcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtga 281  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||| | | |||||        ||||||||||| | |||||||||||| ||| ||     
T  24779276 gcttaatagtagttttagcctcctaacttttttaaagttgcgattttgtc-cactaagaaaaaaaactacaaaaccgtc-tctaagttttgcctctatgg 24779373  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||   |||||   |||||||||| | || |||||||||||| ||||| ||||||| || |||||||||    
T  24779374 cagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgtta 24779447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 34320185 - 34320097
Alignment:
Q  257 cgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||| ||||||||| ||| |||| |||||||| ||||||| ||||||||||||   || ||| |||||||| |||||| |||| ||||    
T  34320185 cgccccctaagttttacatttgtggcagttttggcccccaaagtcaattttgacttggtctacactgacgtggcacccttagtggggtg 34320097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 35877356 - 35877431
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctga 324  Q
    ||||||||||| | ||||||||||| || |||| |||||| |||||||||  ||||||||||| |||| ||||||||    
T  35877356 ctacaaaaccgtcatctaagttttgtatttgtggcagttt-gacccccaagatcaattttgactcagtctacgctga 35877431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 39574240 - 39574409
Alignment:
Q  184 gcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||||||||||||  ||| ||||||||  | |||||||||||||||| | |||||       ||| |||| | ||| |||||||||||||  ||| |    
T  39574240 gcttaatagcagttttcgccctctaactttcacgaagttgcgattttggctccctaagaaaaaaactataaaatcaccccctaagttttgcat--gtggc 39574337  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| |||||||   |||||| ||| | || ||||||||||||||||| ||||||| ||| ||| |||||    
T  39574338 agttttggcccccaagaccaattt-gactcggtctacgctgacgtgacaccataagtgacgtgccacatgtta 39574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 40132904 - 40132952
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttg 230  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||    
T  40132904 ggcttaatagcagttttagtcctctaactttttcaaagttgcgattttg 40132952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 3333889 - 3333947
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||| |||||||||||| |||  |||||||||||||| ||| |||||||    
T  3333889 aaaattgaccttggg-ggccaaaactgccacatatgcaaaacttatggagcggttttgta 3333947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 4096588 - 4096623
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  4096588 acgctgacgtgacaccctaagtgaggtgccacgtgt 4096623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 6130461 - 6130398
Alignment:
Q  292 ccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||| |||||||||||| | || || | |||||||||||||||||||||||| ||| |||||    
T  6130461 ccccaaggtcaattttgactcggtctatgttgacgtgacaccctaagtgaggtgccacatgtta 6130398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 8284158 - 8284205
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  8284158 ttaatagcaattttaaccccataacttttccaaagttgcgattttggc 8284205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 9853032 - 9852973
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaatttt 307  Q
    |||| ||||||||| |||||||||||| ||||  |||||||| ||||||| |||||||||    
T  9853032 ctactaaaccgccccctaagttttgcaactgtatcagttttggcccccaaagtcaatttt 9852973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 10029248 - 10029213
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  10029248 acgctgacgtgacaccctaagtgaggtgccacgtgt 10029213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 35166496 - 35166539
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||    
T  35166496 ggccaaaactgctacagctgcaaaacttagggggtgattttgta 35166539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 35306878 - 35306843
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  35306878 acgctgacgtgacaccctaagtgaggtgccacgtgt 35306843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 39574423 - 39574474
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatgggg 427  Q
    ||||||||||  |||||  ||||||||||| |||||||||||||||||||||    
T  39574423 caaaaattgatattggggtgccaaaactgccacagttgcaaaacttatgggg 39574474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 40133140 - 40133071
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacacc 333  Q
    ||||||||| ||| ||||||||||||| |||| |||| |||||||||||| || ||| |||||||| ||||    
T  40133140 ctaagttttacatttgtgacagttttggcccc-aatgccaattttgacccggtctaccctgacgtggcacc 40133071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 31080727 - 31080686
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttg 289  Q
    ||||||||||||||||||||||||||| ||||  ||||||||    
T  31080727 ctacaaaaccgccctctaagttttgcaactgtagcagttttg 31080686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 31157080 - 31157043
Alignment:
Q  317 tacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  31157080 tacgctgacgtgacaccctaagtgaggtgccacttgtt 31157043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 34734249 - 34734212
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  34734249 acgctgacgtgacaccctaggtgaggtgccacgtgtta 34734212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 35877465 - 35877526
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| || ||| ||| |||||| | ||||||||||||||||| |||||| |||||||    
T  35877465 caaaaattggccctggaaggtcaaaaccgttacagttgcaaaacttagggggcggttttgta 35877526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 35877527 - 35877483
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacc 292  Q
    |||||||||||||| |||||||||||| |||| || |||||||||    
T  35877527 ctacaaaaccgccccctaagttttgcaactgtaacggttttgacc 35877483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 37897845 - 37897785
Alignment:
Q  377 aaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||  ||| || ||||||||| |||||| |||||||||||| |||||| |||||||    
T  37897845 aaaaattggtcttcgggggccaaaacagctacaattgcaaaacttagggggcggttttgta 37897785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 2836899 - 2837073
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||||||||| | | |||        |||||||||||||| ||||||||||||| ||||    
T  2836899 ggcttaataacagttttaaccccctaacttttccaaagctgcgattttggcccccaaagaaaaaaaactacaaaaccgccccctaagttttgcatgtgtg 2836998  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    | ||||||| ||||||| | |||||||||| |||| ||| |||||||| |||||||||||||||| |||||||||    
T  2836999 agagttttggcccccaaggccaattttgactcagtctacactgacgtggcaccctaagtgaggtgccacgtgtta 2837073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 44356710 - 44356538
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||   |||||        ||||||||||||| ||||||||||||| |||| |    
T  44356710 ggcttaatagcagttttagcccctaactttctcaaagttgcgattttggccgcctaagaaaaaaattacaaaaccgccccctaagttttgcatatgtggc 44356611  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| |||||||   ||||||||||   || |||| | ||||| |||||||||||||||| |||||||||    
T  44356610 agttttggcccccaagaccaattttgacttggtctacgataacgtggcaccctaagtgaggtgtcacgtgtta 44356538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 183 - 339
Target Start/End: Complemental strand, 8965824 - 8965672
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||  |||       ||| |||||||||| |||||||||||||||||| |    
T  8965824 ggcttaatagcaattttaacccctaattttttcaaagttgcgattttggccct--aagaaaaa--ctataaaaccgccccctaagttttgcatctgtggc 8965729  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagt 339  Q
    |||||||  ||||||||||||||||||| | || |||| ||| ||| ||||||||||    
T  8965728 agttttggtccccaatgtcaattttgactcggtctacgttgatgtggcaccctaagt 8965672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 53312286 - 53312460
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgt 279  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||||||| | |||||         |||||||||| ||| |||| |||||||  |||    
T  53312286 ggcttaatagcatttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaacaaactacaaaaccaccccctaaattttgcacatgt 53312385  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    | |||||||| ||||||| | |||||| ||| |||| |||||||||||| |||||||||||||||| ||||||||    
T  53312386 ggcagttttggcccccaaggccaatttggactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgtt 53312460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 43074825 - 43074728
Alignment:
Q  258 gccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| |||||||||||||||||| |||||||| ||||||| | |||||||||| |||| |||||||||||| |||||||||||||||| |||||||||    
T  43074825 gccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 43074728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 183 - 437
Target Start/End: Complemental strand, 10060013 - 10059751
Alignment:
Q  183 ggcttaatagcagtttta-acccctaactttttcaaagttgcgattttggcactctaagnnnnnnn---ctacaaaaccgccctctaagttttgcatctg 278  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| || |  ||||          |||||||||||||| ||||||||||||||||    
T  10060013 ggcttaatagcagttttagacccctaattttttcaaagttgcgatttttgccccttaagaaaaaaaaaactacaaaaccgccccctaagttttgcatctg 10059914  T
Q  279 tgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgag----gtgacacgtgttannnnnnnnnnnnnnnnnna 374  Q
    || |||||||| ||| ||| | |||||||||| | || |||| ||||||| |||||||||||||    ||| |||||||||                  |    
T  10059913 tggcagttttggccctcaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgcgtgccacgtgttattttttaatttttttttta 10059814  T
Q  375 tcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
     ||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||    
T  10059813 ccaaaaattgaccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgta 10059751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 14449599 - 14449424
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactct-aagnnnnnnn--ctacaaaaccgccctctaagttttgcatctg 278  Q
    |||||||||| ||||||| |||| |||||||| |||||||||||||||||| |||| |||         |||||||||||| | ||||||||||||| ||    
T  14449599 ggcttaatagtagttttagccccctaacttttccaaagttgcgattttggc-ctcttaaggaaaaaaaactacaaaaccgctccctaagttttgcatttg 14449501  T
Q  279 tgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    || |||||||| ||||||| | |||||||||| | ||||||||||||||| |||| ||||||||||| |||||||||    
T  14449500 tggcagttttggcccccaaggccaattttgactcggtttacgctgacgtggcaccataagtgaggtgccacgtgtta 14449424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 20112463 - 20112290
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    ||||||||| |||||||| ||  ||||||||| |||||||||||||||||| | | |||       |||||||||||||| | ||||||||||| ||||     
T  20112463 ggcttaataacagttttagccttctaacttttccaaagttgcgattttggcccccaaagaaaaatactacaaaaccgcccccaaagttttgcatatgtgg 20112364  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| ||||||| | |||||||||| | ||  ||||||||||| ||| |||||||||||| |||||||||    
T  20112363 cagttttggcccccaaagccaattttgactcggtcaacgctgacgtggcactctaagtgaggtgccacgtgtta 20112290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 2016791 - 2016954
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||| ||| |||        ||||||||| |||| ||||||||||||  ||||    
T  2016791 ggcttgatagcagttttagccccctaacttttccaaagttgcgattttggccctcaaagaaaaaagactacaaaactgccccctaagttttgcacatgtg 2016890  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
     |||||||| ||||||| | |||||||||| | || |||||||||||| |||||||||||||||    
T  2016891 gcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggt 2016954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 29697590 - 29697695
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| |||||||||||||||||| ||||||||   || || | ||||||||||||||| |||||||||||| |||||||||||||||| ||    
T  29697590 tacaaaaccgccccctaagttttgcatctgtggcagttttggttcc-aaggccaattttgacccagtctacgctgacgtggcaccctaagtgaggtgtca 29697688  T
Q  349 cgtgtta 355  Q
    |||||||    
T  29697689 cgtgtta 29697695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 1420858 - 1420684
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| ||||| ||||||  ||||||| |||||||||  | |||||        ||||||||||||||  |||||||||||| ||||    
T  1420858 ggcttaatagcagttttagccccttaactttcccaaagttacgattttggtcccctaagaaaaagaactacaaaaccgccccataagttttgcatttgtg 1420759  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     ||||| |||||||||| | |||||||||| | ||  ||||||||||| |||||||||||||||| |||||||||    
T  1420758 gcagttatgacccccaaggccaattttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtta 1420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 52463101 - 52462928
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||||||||  |||||||        |||||||||  |||| |||||||||||||| ||    
T  52463101 ggcttaataacagttttagccccctaattttttcaaagttgcgattttgggcctctaagaaaaaaaactacaaaacgcccct-taagttttgcatctatg 52463003  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| |||||||   ||||||| |||| || ||| |||||||||||||| |||||||||| |||||||||    
T  52463002 acagttttggcccccaaaaccaattttaacccggtctacactgacgtgacacccaaagtgaggtgtcacgtgtta 52462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 4796283 - 4796180
Alignment:
Q  252 aaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    ||||||||||| ||||||||||| ||||| |||||||| |||||||  ||||||||||| | || |||||||||||| |||||||||||||||| ||| |    
T  4796283 aaaaccgccctttaagttttgcacctgtggcagttttggcccccaaaatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccactt 4796184  T
Q  352 gtta 355  Q
    ||||    
T  4796183 gtta 4796180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 23759887 - 23759715
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    ||||||||| || ||||||||||| ||||||   ||||||||||||||||  | |||||       ||||||||||| || |||||||||| ||||||||    
T  23759887 ggcttaataacaattttaaccccttaactttcataaagttgcgattttggtcccctaagaaaaaaactacaaaaccgtcccctaagttttgtatctgtga 23759788  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||| || |||| | |||||||||| |  | || ||||||||| |||||||||||||||| ||||||||    
T  23759787 cagttttggcctccaaggccaattttgactcgatctaagctgacgtggcaccctaagtgaggtgccacgtgtt 23759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 47999533 - 47999693
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| || | |||||        |||||||||||| |  |||||||| |||||||| |||    
T  47999533 ttaatagcagttttaactcctaattttttcaaagttgcgatttttgccccctaagaaaaaaaactacaaaaccgctccataagttttacatctgtggcag 47999632  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||||| || | |||||||||  | || |||||||||||| |||| |||||||||||    
T  47999633 ttttgacccctaaggccaattttgattcggtctacgctgacgtggcaccttaagtgaggtg 47999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 355
Target Start/End: Complemental strand, 53925042 - 53924891
Alignment:
Q  204 cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaa 303  Q
    ||||||||||  ||||||||||||||||  | |||||       ||| |||| | ||| ||||||||||||| ||||||||||||||||| ||| |||||    
T  53925042 cctaacttttctaaagttgcgattttggtcccctaagaaaaaaactataaaatctccccctaagttttgcatttgtgacagttttgaccctcaaggtcaa 53924943  T
Q  304 ttttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| | || |||| ||| ||||||||||||||||| || |||||||||    
T  53924942 ttttgactcggtctacgttgatgtgacaccctaagtgagatgtcacgtgtta 53924891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 27978695 - 27978865
Alignment:
Q  186 ttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||| | ||| |||||||| ||||||||||||||||| | | |||||        |||||||| ||| | |||||||||||| |||| |||    
T  27978695 ttaatagcagtttaagccctctaactttctcaaagttgcgattttgaccccctaagaaaaaaattacaaaactgccatataagttttgcatttgtggcag 27978794  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||||| | |||||||||| | || |||||||||||| ||||| | |||| ||| |||||||||    
T  27978795 ttttgacccccaaggccaattttgactcggtctacgctgacgtggcaccccacgtgaagtgccacgtgtta 27978865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 344
Target Start/End: Original strand, 51362606 - 51362702
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggt 344  Q
    |||||||||||||| ||||||||||||| |||| |||||||| |||||||   |||||||||| |||| ||| |||||||| |||||||||||||||    
T  51362606 ctacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgactcagtctacactgacgtggcaccctaagtgaggt 51362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 21871696 - 21871527
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||| | | ||||        |||||||||||||  ||||||||||||||| ||  |    
T  21871696 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaa--aaaaaactacaaaaccgcctcctaagttttgcatctttggta 21871599  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||| |||||||  |||||||| || | || ||||||||| |||||| ||||||| |||| |||||||||    
T  21871598 gttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgtta 21871527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 21927557 - 21927388
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||| | | ||||        |||||||||||||  ||||||||||||||| ||  |    
T  21927557 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaa--aaaaaactacaaaaccgcctcctaagttttgcatctttggta 21927460  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||| |||||||  |||||||| || | || ||||||||| |||||| ||||||| |||| |||||||||    
T  21927459 gttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgtta 21927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 51371546 - 51371636
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||||| | || ||||||||||||||||||||||||||||| | || ||| |||||||| |||||||| ||||||| ||||||||    
T  51371546 taagttttgcatatatggcagttttgacccccaatgtcaattttgactcggtctacactgacgtggcaccctaaatgaggtgccacgtgtt 51371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 25909487 - 25909661
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||||| | |||||        ||| |||||||||| ||||||||||||  ||||    
T  25909487 ggcttaatagcagttttaaccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactataaaaccgccccctaagttttgcacttgtg 25909586  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
       |||||| ||||||| | |||||||||| | || |||||||||||| |||| ||||| || || |||||||||    
T  25909587 gaggttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccttaagtaagatgccacgtgtta 25909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 2654216 - 2654125
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagt 339  Q
    ||||||||| |||| ||||||||||||| |||| |||||||||||||||| | ||||||||||   || |||||||||||| ||||||||||    
T  2654216 ctacaaaactgccccctaagttttgcatatgtggcagttttgacccccaaggccaattttgacttggtctacgctgacgtggcaccctaagt 2654125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 12719760 - 12719585
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgt 279  Q
    ||||||||||||||||||||||| |||||||  ||||||||  |||||||| | |||||         |||||||||| ||| |||||||||||||||||    
T  12719760 ggcttaatagcagttttaaccccctaactttcccaaagttgatattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttgcatctgt 12719661  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    | |||||||| || ||||   |||||||||| | || |||||||| ||| ||||| |||||||||| ||| |||||    
T  12719660 ggcagttttggcctccaagaccaattttgactcggtctacgctgatgtggcaccccaagtgaggtgccacatgtta 12719585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 34567849 - 34567756
Alignment:
Q  262 tctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||| |||| |||||||| |||||||||||||||| ||| | ||  | ||||||||||||||| |||||| ||| |||||||||    
T  34567849 tctaagttttgcatatgtggcagttttggcccccaatgtcaatttcgactcggtcaatgctgacgtgacacccaaagtgaagtgccacgtgtta 34567756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 16292335 - 16292442
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgaccccca-atgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtga 346  Q
    |||||||| ||||||||||||||||||  |||| |||||||| |||||| |||| ||||||||| | || ||| |||||||| | ||||||||||||||     
T  16292335 ctacaaaatcgccctctaagttttgcacatgtggcagttttggcccccatatgt-aattttgactcggtctacactgacgtggccccctaagtgaggtgt 16292433  T
Q  347 cacgtgtta 355  Q
    |||||||||    
T  16292434 cacgtgtta 16292442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 351
Target Start/End: Complemental strand, 21322943 - 21322855
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| | || |||||| ||| ||||| |||| |||| || |||||    
T  21322943 ctaagttttgcatatgtgacagttttgacccccaatgccaattttgactcggtctacgctaacgcgacactctaaatgagatgccacgt 21322855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 50769366 - 50769537
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn--ctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||||||||||| |||| |||||||  |||||||||||||||| | | |||||         |||||||||||||| ||||||||||||||| || |    
T  50769366 ttaatagcagttttatccccctaactttcccaaagttgcgattttgcccccctaagaaaaaaaaactacaaaaccgccc-ctaagttttgcatctatggc 50769464  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||  |||| || |||||||||||| | |  |||||||||||  |||||| ||||||||| |||||||||    
T  50769465 agttttagcccctaaggtcaattttgactcggcctacgctgacgtagcaccctgagtgaggtgccacgtgtta 50769537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 21597649 - 21597542
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| || |||| |||||||| |||| |||||||| |||||||    ||||||||| | || |||||||||||| |||||||| ||||||| |    
T  21597649 ctacaaaaccgtcccctaaattttgcatatgtggcagttttggcccccaaaactaattttgactcggtctacgctgacgtggcaccctaaatgaggtgcc 21597550  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  21597549 acgtgtta 21597542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 2180780 - 2180874
Alignment:
Q  186 ttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || | |||||       |||||||| || || |||| |||||||||||||    
T  2180780 ttaatagcagttttaacccttaactttttcaaagttgcgattttagctccctaagaaaaaaactacaaaatcgtcccctaaattttgcatctgtg 2180874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 6637373 - 6637203
Alignment:
Q  186 ttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||| ||||| ||| | || |||||||||||| ||||||| || | |||||       |||||||| |||||  |||||||||||| | || |||    
T  6637373 ttaatagcacttttagccctttaattttttcaaagtttcgattttagccccctaagaaaaaaactacaaaatcgccccttaagttttgcatttctggcag 6637274  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||| ||| ||||| |||||||||| | || ||| ||||| || |||||||||||||||| ||| |||||    
T  6637273 ttttggcccacaatgccaattttgactcggtctacactgacatggcaccctaagtgaggtgccacatgtta 6637203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 11824256 - 11824351
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||||||||| ||||||||||||| |||| ||||||||  ||| || | |||||||||| |||| |||||||| ||| ||||||||||||||||    
T  11824256 ctacaaaaccgccc-ctaagttttgcatgtgtggcagttttggtccc-aaggccaattttgactcagtctacgctgatgtggcaccctaagtgaggtg 11824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 42526093 - 42526032
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||| |||||||| |||||||    
T  42526093 caaaaattgacattggggggccaaaactactacagttgcaaaactaatggggcggttttgta 42526032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 54984080 - 54983983
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||| ||||| |||| |||||||  |||| |||||||| | |||||||||||||||| |   || |||||||||||| ||||||||||||||||    
T  54984080 ctacaaaatcgccccctaaattttgcacatgtgtcagttttggcacccaatgtcaattttggcttggtctacgctgacgtggcaccctaagtgaggtg 54983983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 14061017 - 14060888
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaag-nnnnnnnctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||||| | |||||        ||||||||| | || ||||||||| ||||||||    
T  14061017 ggcttaatagcagctttaactccctaattttttcaaagttgcgattttggctccctaagaaaaaaaactacaaaactgtcccctaagttttacatctgtg 14060918  T
Q  281 acagttttgacccccaatgtcaattttgac 310  Q
     |||||||| ||||||| |  |||||||||    
T  14060917 gcagttttggcccccaaggctaattttgac 14060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 21597532 - 21597484
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21597532 atcaaaaattgaccttggggtgccaaaactgctacagttgcaaaactta 21597484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 43074717 - 43074665
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggc 428  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  43074717 caaaaattggcattggggggccaaaactgctacagttgcaaaacttatggggc 43074665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 26089537 - 26089643
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||| ||||  |||||||| |||||||||||||||||  ||  || | |||||||||| |||  |||||||||||| |||||||||||| ||| |    
T  26089537 ctacaaaacagccccttaagttttacatctgtgacagttttggtcca-aaggccaattttgactcagactacgctgacgtggcaccctaagtgaagtgcc 26089635  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  26089636 acgtgtta 26089643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 31553489 - 31553382
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| ||||| |||| |||| ||||| || |||||||| ||||||| | |||||||||| | || |||||| ||| | ||||||||||||||||      
T  31553489 ctacaaaatcgccccctaaattttacatctatggcagttttggcccccaaggccaattttgactcggtctacgctaacgcggcaccctaagtgaggtgct 31553390  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  31553389 acgtgtta 31553382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 6207421 - 6207359
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    |||||||||||||| ||||||||||||| |||| || ||||| ||||||| ||||||||||||    
T  6207421 ctacaaaaccgccccctaagttttgcatttgtggcaattttggcccccaaggtcaattttgac 6207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 8070630 - 8070799
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgaca 283  Q
    ||||||||||||||||||||| |||||||| ||||||||| | |||||| | |||||        |||||||| ||||  ||| ||||| ||||||| ||    
T  8070630 cttaatagcagttttaaccccctaacttttccaaagttgcaactttggccc-ctaagaaaaaaattacaaaactgccca-taaattttgtatctgtggca 8070727  T
Q  284 gttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||| ||||| |  |||||||| ||   || |||||||||||| ||||| |||||||||| |||||||||    
T  8070728 gttttggccccctagatcaattttaacttggtctacgctgacgtggcaccccaagtgaggtgccacgtgtta 8070799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 19909173 - 19909223
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19909173 ggcttaatagcagttttaaccccctaactttctcaaagttgcgattttggc 19909223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 54855304 - 54855477
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactc-taagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgt 279  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||| | ||| ||||        | ||||||| ||||  |||||||||||||| |    
T  54855304 ggcttaatagcagttttaaccacctaactttctcaaagctgcgattttgac-ctcataagaaaaaaaacgacaaaactgccccttaagttttgcatct-t 54855401  T
Q  280 gacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |  |||||||  |||||| | |||||||||| | || |||||||||||| |||||||||||||||| ||| |||||    
T  54855402 ggtagttttggtccccaaagccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgtta 54855477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 21957780 - 21957668
Alignment:
Q  184 gcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaag--nnnnnnnctacaaaaccgccctctaagttttgcatctgtg 280  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||         |||||||||||||  |||||||||||| ||||     
T  21957780 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggc-ctctaagaaaaaaaaactacaaaaccgcctcctaagttttgcaactgta 21957682  T
Q  281 acagttttgacccc 294  Q
     |||||||||||||    
T  21957681 gcagttttgacccc 21957668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 35393854 - 35393915
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||| || |||||| |||||||    
T  35393854 caaaaattggccttggggggccaaaactgctacagttacaaaacctagggggcggttttgta 35393915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 53924874 - 53924814
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||| || |||||||    
T  53924874 caaaaattgatcttggg-ggccaaaactgctacagttgcaaaacttaggggacggttttgta 53924814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 307
Target Start/End: Complemental strand, 2181438 - 2181313
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||| ||||  | |||||||||||   |||||||||||||||| |  ||||       ||||||||| ||||||||||||||||| |||| |    
T  2181438 ggcttaatagcactttttgctccctaacttttatgaagttgcgattttggctccttaagaaaagaactacaaaactgccctctaagttttgcaactgtaa 2181339  T
Q  282 cagttttgacccccaatgtcaatttt 307  Q
    |||||||| ||||||| | |||||||    
T  2181338 cagttttggcccccaaggacaatttt 2181313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 14060760 - 14060804
Alignment:
Q  187 taatagcagttttaacccc-taactttttcaaagttgcgattttg 230  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  14060760 taatagcagttttaaccccctaactttttcaaagttgcgattttg 14060804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 351
Target Start/End: Original strand, 21451459 - 21451627
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||| || | || ||       |||||||| || |  |||| |||||||  ||||     
T  21451459 ggcttaatagcagttttagcctcctaactttctcaaagttgcgatttttgctccctgagataaaaactacaaaaacgtctcctaaattttgcacttgtgg 21451558  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    ||||||||  || ||| |  ||||||||| | || ||| ||||||||||||||||||||||||| |||||    
T  21451559 cagttttg-gccacaaggcgaattttgactcggtctacactgacgtgacaccctaagtgaggtgccacgt 21451627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 42526155 - 42526103
Alignment:
Q  303 attttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| |||| ||| ||||||||||||||||||||||||| |||||||||    
T  42526155 attttgactcagtctacactgacgtgacaccctaagtgaggtgccacgtgtta 42526103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 6614972 - 6614928
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  6614972 caaaaattgaccttggg--gccaaaactgctacagttgcaaaactta 6614928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 426
Target Start/End: Original strand, 1571593 - 1571643
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggg 426  Q
    ||||||||| |||| || |||||||||||| ||||||||||||||||||||    
T  1571593 caaaaattggccttagggggccaaaactgccacagttgcaaaacttatggg 1571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 2654083 - 2654037
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||    
T  2654083 caaaaattggctttggggggccaaaactgctacagttgcaaaactta 2654037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 3658110 - 3658156
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||    
T  3658110 caaaaattggccttggggagccaaaactgctacagttgcaaaactta 3658156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 4796036 - 4796094
Alignment:
Q  183 ggcttaatagcagttttaa-cccctaactttttcaaagttgcgattttggcactctaag 240  Q
    |||||||||||| |||||  ||||||||||||||||| ||||||||||||| |||||||    
T  4796036 ggcttaatagcatttttagtcccctaactttttcaaaattgcgattttggccctctaag 4796094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 21322836 - 21322790
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||    
T  21322836 caaaaattggccttgggaggccaaaactgttaaagttgcaaaactta 21322790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 1420537 - 1420627
Alignment:
Q  185 cttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgca 274  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||||   ||||        |||||||||||||| ||||||||||||    
T  1420537 cttaatagcagttttagccccctaacttttccaaagttgcgattttggcctcctaaaaaaaaaactacaaaaccgccccctaagttttgca 1420627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 2837085 - 2837146
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||  |||||||||||||||| ||| |||||||| |||||| |||||||    
T  2837085 caaaaattggccttggagggccaaaactgctacaattgtaaaacttagggggcggttttgta 2837146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 6207305 - 6207244
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||  ||||||  ||||||||||||||||||| ||||||||||||||  |||||||    
T  6207305 caaaaattggtcttggggagccaaaactgctacagttgtaaaacttatggggcagttttgta 6207244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 8965648 - 8965588
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||| | |||||||||  |||||||||||||||| |||||| |||||||    
T  8965648 caaaaattgaccttggg-gaccaaaactggcacagttgcaaaacttaaggggcggttttgta 8965588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 16292465 - 16292514
Alignment:
Q  388 ttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| |||||||||| |||||||||||||||||| ||| ||||||||||    
T  16292465 ttggggggccaaaactactacagttgcaaaacttaggggacgattttgta 16292514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 3658021 - 3658081
Alignment:
Q  250 acaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    |||||||| ||  |||| ||||||||||||||||||||||  ||| |||||||||||||||    
T  3658021 acaaaaccacctcctaaattttgcatctgtgacagttttggtcccaaatgtcaattttgac 3658081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 4796146 - 4796114
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggg 426  Q
    |||||||||||||||||||||||||||||||||    
T  4796146 ggccaaaactgctacagttgcaaaacttatggg 4796114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 18937351 - 18937311
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgatttt 434  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  18937351 ggccaaaactgctacagttgcaaaacttaggggacgatttt 18937311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 5344407 - 5344442
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  5344407 acgctgacgtgacaccctaagtgaggtgccacgtgt 5344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 355
Target Start/End: Complemental strand, 6615060 - 6614984
Alignment:
Q  277 tgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| |||||||||||||  ||  |||||||||| | || ||||||||| ||||||||||||||||||| ||| |||||    
T  6615060 tgtggcagttttgacccc--ataccaattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgtta 6614984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 8965587 - 8965646
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaatttt 307  Q
    ||||||||||||||  ||||||||||| ||||| ||||||||  |||||| |||||||||    
T  8965587 ctacaaaaccgccccttaagttttgcaactgtgccagttttggtccccaaggtcaatttt 8965646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 11824399 - 11824442
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||    
T  11824399 ggccaaaactactacagttgcaaaacttagggggcgaatttgta 11824442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 20118028 - 20117969
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttg 435  Q
    ||||||||| | |||||| | ||||||||| ||||||| |||||||||||| ||||||||    
T  20118028 caaaaattggctttgggatgtcaaaactgcgacagttgtaaaacttatgggacgattttg 20117969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 437
Target Start/End: Complemental strand, 23759690 - 23759628
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||| ||| ||| || |||||||    
T  23759690 atcaaaaattggccttggg-ggccaaaactactacagttgcaaaatttaggggacggttttgta 23759628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29350885 - 29350940
Alignment:
Q  186 ttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaag 240  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||  |||||||    
T  29350885 ttaataacagttttaaccccttaacttattcaaagttgcgattttggtcctctaag 29350940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 353
Target Start/End: Original strand, 37289523 - 37289627
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttg-acccccaatgtcaatt-ttgacccagtttacgctgacgtgacaccctaagtgaggtga 346  Q
    |||||||| |||| ||| ||||||  ||| ||||||||||| |||||||  ||| ||| ||||| ||||  ||||||||||| ||||||||||||||||     
T  37289523 tacaaaacagccccctatgttttgattctttgacagttttggaccccca--gtccattgttgactcagtcaacgctgacgtggcaccctaagtgaggtgc 37289620  T
Q  347 cacgtgt 353  Q
    |||||||    
T  37289621 cacgtgt 37289627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 44921751 - 44921786
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  44921751 acgctgacgtgacaccctaagtgaggtgccacgtgt 44921786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 49185754 - 49185805
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||| |||||||||| | |||||||||||||||| |||||| |||||||    
T  49185754 ccttggggggccaaaactacaacagttgcaaaacttaaggggcggttttgta 49185805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 49185870 - 49185823
Alignment:
Q  185 cttaatagcagttttaacccctaactttttcaaagttgcgattttggc 232  Q
    ||||||||||||||| ||||| ||||||  ||||||||||||||||||    
T  49185870 cttaatagcagttttcacccccaactttcacaaagttgcgattttggc 49185823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 51233680 - 51233723
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||    
T  51233680 ggccaaaactgctacagttgccaaaattaaggggcgattttgta 51233723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 51537792 - 51537757
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  51537792 acgctgacgtgacaccctaagtgaggtgccacgtgt 51537757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 51696673 - 51696708
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  51696673 acgctgacgtgacaccctaagtgaggtgtcacgtgt 51696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 54607024 - 54607059
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  54607024 acgctgacgtgacaccctaagtgaggtgccacgtgt 54607059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 2181311 - 2181356
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  2181311 caaaaattgtccttggg-ggccaaaactgttacagttgcaaaactta 2181356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 35615479 - 35615433
Alignment:
Q  185 cttaatagcagttttaacccctaactttttcaaagttgcgattttgg 231  Q
    ||||||||||||||| ||||||||||||  | |||||||||||||||    
T  35615479 cttaatagcagttttcacccctaactttcacgaagttgcgattttgg 35615433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 355
Target Start/End: Original strand, 49185665 - 49185743
Alignment:
Q  277 tgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| |||||||| ||||||| | ||||||||||   || |||||||||||| ||||||||| |||||| ||| |||||    
T  49185665 tgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccctaagcgaggtgccacatgtta 49185743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 50769549 - 50769594
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||    
T  50769549 caaaaattggtcttggg-ggccaaaactgctacagttgcaaaactta 50769594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 14016919 - 14016964
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactt 421  Q
    ||||||||| ||||||| | || |||||||||||||||||||||||    
T  14016919 caaaaattggccttgggggaccgaaactgctacagttgcaaaactt 14016964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 20118133 - 20118052
Alignment:
Q  265 aagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtga 346  Q
    ||||||||||| |||| |||||||| |||||||   |||||||||  |  | ||||| |||||| |||||||||||||||||    
T  20118133 aagttttgcatatgtgccagttttggcccccaagaccaattttgattcgatctacgcggacgtggcaccctaagtgaggtga 20118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 20737545 - 20737500
Alignment:
Q  186 ttaatagcagttttaacc-cctaactttttcaaagttgcgattttg 230  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||    
T  20737545 ttaatagcagttttaacatcctaactttctcaaagttgcgattttg 20737500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 26675121 - 26675217
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttg-acccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    |||||||| |||| ||| ||||||  ||| ||||||||||| |||||||||  || | ||||| ||||  ||||||||||| ||||||||||||||||    
T  26675121 tacaaaacagccccctatgttttgattctttgacagttttggacccccaatc-cattgttgactcagtcaacgctgacgtggcaccctaagtgaggtg 26675217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 35615315 - 35615364
Alignment:
Q  184 gcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||||    
T  35615315 gcttaatagcagttttagccccctaacttttctaaagttgcgattttggc 35615364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 51233547 - 51233651
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtg-acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtga 346  Q
    |||||| ||||||  ||||||||||||   ||| ||||||||| ||||||| | |||||| |||   || |||||||||||| ||||||||||||||||     
T  51233547 ctacaataccgcctcctaagttttgcactcgtggacagttttggcccccaa-gccaatttggacttggtctacgctgacgtggcaccctaagtgaggtgc 51233645  T
Q  347 cacgtg 352  Q
    ||||||    
T  51233646 cacgtg 51233651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 52462907 - 52462846
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||| ||| |||| ||||||||  ||||||||||||||||  ||||| |||||||    
T  52462907 caaaaattgactttgagaggtcaaaactgaaacagttgcaaaacttaaagggcggttttgta 52462846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 1420646 - 1420602
Alignment:
Q  393 aggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||| || |||||||||||||| |||||| |||||||    
T  1420646 aggccaaaactgatatagttgcaaaacttagggggcggttttgta 1420602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 1571399 - 1571447
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttg 230  Q
    |||||||||||||||||||| ||||||||||   |||||||||||||||    
T  1571399 ggcttaatagcagttttaacaccctaactttacaaaagttgcgattttg 1571447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 10059750 - 10059810
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagtttt-gacccccaatgtcaatttt 307  Q
    |||||||||||||| |||||||||||| ||||  ||||||| | ||||||| |||||||||    
T  10059750 ctacaaaaccgccccctaagttttgcaactgtagcagttttggtcccccaaggtcaatttt 10059810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 20737437 - 20737477
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgatttt 434  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  20737437 ggccaaaactgctatagttgcaaaatttagggggcgatttt 20737477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 21871490 - 21871462
Alignment:
Q  394 ggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||||||||||||||||    
T  21871490 ggccaaaactgctacagttgcaaaactta 21871462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 21927351 - 21927323
Alignment:
Q  394 ggccaaaactgctacagttgcaaaactta 422  Q
    |||||||||||||||||||||||||||||    
T  21927351 ggccaaaactgctacagttgcaaaactta 21927323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 21957539 - 21957587
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttg 230  Q
    ||||||||| |||||||| | |||||||||| |||||||||||||||||    
T  21957539 ggcttaatatcagttttagctccctaactttctcaaagttgcgattttg 21957587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 21957673 - 21957713
Alignment:
Q  397 caaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  21957673 caaaactgctacagttgcaaaacttaggaggcggttttgta 21957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 29697705 - 29697753
Alignment:
Q  374 atcaaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||| |||| || | |||||||| ||||||||||||||||||    
T  29697705 atcaaaaattggccttaggggaccaaaactactacagttgcaaaactta 29697753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 35392683 - 35392723
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttg 289  Q
    |||||||| |||| |||||||||||| ||||||||||||||    
T  35392683 tacaaaactgccccctaagttttgcacctgtgacagttttg 35392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 42526258 - 42526214
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgatttt 229  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||    
T  42526258 ttaatagcagttttaaccccctaactttcttaaagttgcgatttt 42526214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 47999715 - 47999755
Alignment:
Q  397 caaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||||||||||||| |||| | |||||||    
T  47999715 caaaactgctacagttgcaaaacttaaggggaggttttgta 47999755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 436
Target Start/End: Original strand, 51371649 - 51371709
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgt 436  Q
    ||||||||||||||||| ||||||||| |||| ||||  |||||||| ||| || ||||||    
T  51371649 caaaaattgaccttggggggccaaaacggctatagtttaaaaacttaagggacggttttgt 51371709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 14943857 - 14943686
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| ||||| ||||||| |||||||| ||||||||  |||||||       ||||||||||||||||||||||||||| |||||     
T  14943857 ggcttaatagcagttttagccccttaacttttccaaagttgtgattttggt-ctctaagaaaaaaactacaaaaccgccctctaagttttgcacctgtgg 14943759  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    || ||||| ||||||| |  ||||||||| | || |||||||| ||| |||||||||||||||| ||||||||    
T  14943758 catttttggcccccaaggctaattttgactcggtctacgctgatgtggcaccctaagtgaggtgccacgtgtt 14943686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 2609399 - 2609230
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||  | |||||       |||||||| |||||  |||||||| ||| |||| |||    
T  2609399 ttaatagcagttttaactcaataactttttcaaagttgcgattttggtcccctaagaaaaaaactacaaaatcgccccataagttttacatatgtggcag 2609300  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||||||  ||||||||||| | || |||||||| ||| ||||||||||||| || ||||||||    
T  2609299 ttttgacccccaagatcaattttgactcggtctacgctgatgtggcaccctaagtgagttgccacgtgtt 2609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 37803190 - 37803296
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||  ||||||||||||| |||| ||||||||||||| ||||||||||||||| | || |||||||||||| |||||||||| ||||| |    
T  37803190 ctacaaaaccgcctcctaagttttgcatttgtggcagttttgacccc-aatgtcaattttgactcggtctacgctgacgtggcaccctaagtaaggtgtc 37803288  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  37803289 acgtgtta 37803296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 34679097 - 34679271
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctc-taagttttgcatctgtg 280  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||||   |||||        ||||||||||||| | |||||||||||  ||||    
T  34679097 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaaaattacaaaaccgcccccctaagttttgcacatgtg 34679196  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     |||||||| || ||||    ||||||||||| || |||||||||||| |||||||||||||||| |||||||||    
T  34679197 gcagttttggcctccaagacaaattttgacccggtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 34679271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 39918434 - 39918608
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||| ||||||| |||| ||||||| ||||||||||||||||||| | |||||        || ||||| ||||| ||||||||||||| ||||    
T  39918434 ggcttaatagtagttttagccccctaactttctcaaagttgcgattttggccccctaagaaaaaaaactgcaaaatcgcccgctaagttttgcatatgtg 39918533  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     | |||||| ||||||| | |||||||||| | || | |||||||||| |||||||||||||||| |||||||||    
T  39918534 gctgttttggcccccaaggccaattttgactcggtcttcgctgacgtggcaccctaagtgaggtgccacgtgtta 39918608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 5470649 - 5470478
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    ||||| |||||||||||| |||| |||||||   ||||||||||||||||| | ||||        ||||||||||||||  |||||||| ||||||||     
T  5470649 ggctttatagcagttttagccccctaactttcctaaagttgcgattttggccccctaa-aaaaaaactacaaaaccgccccttaagttttacatctgtgg 5470551  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||| ||||||| | |||||||||| | || || ||||||||| |||||||||||||||| ||||||||    
T  5470550 cagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagtgaggtgccacgtgtt 5470478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 37431610 - 37431717
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| ||||| ||||||||||||| |||| |||||||| ||||||| | |||||||||| | || |||||||||||| |||||||||||||||| |    
T  37431610 ctacaaaatcgcccactaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 37431709  T
Q  348 acgtgtta 355  Q
    || |||||    
T  37431710 acatgtta 37431717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 43028794 - 43028967
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||| |||| |||||| | |||||||||||||||||| | |||||        |||||||||| ||| ||||||||||||||||||    
T  43028794 ggcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaacccccc-ctaagttttgcatctgtg 43028892  T
Q  281 acagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
     |||||||| || | |  | |||||||||| | || |||||||||||| |||||||||||||||| || ||||||    
T  43028893 gcagttttggcctctagggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccaagtgtta 43028967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 14489214 - 14489387
Alignment:
Q  183 ggcttaatagcagttttaaccc-ctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| ||| ||||||||   ||||||| ||||||||| |  ||||        ||||||||||||| |||||||||||| |||||     
T  14489214 ggcttaatagcagttttagccctctaactttccaaaagttgtgattttggccccttaagaaaaaaattacaaaaccgccccctaagttttgcacctgtgg 14489313  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||| ||||   |||||||||| | || |||||||| ||| ||||||| |||||||| |||||||||    
T  14489314 cagttttgacctccaagaccaattttgactcggtctacgctgatgtggcaccctacgtgaggtgccacgtgtta 14489387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 27489514 - 27489606
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||| ||||||||||||| |||||||| || |||| | |||||||||| | ||||||||||||||| || |||||||||||||||||||||||    
T  27489514 ctaacttttgcatctgtggcagttttggcctccaagggcaattttgactcggtttacgctgacgtggcatcctaagtgaggtgacacgtgtta 27489606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 249 - 355
Target Start/End: Complemental strand, 44617985 - 44617879
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||| ||||||||||||| |||| |||||||| |||||||   |||||||||| | || |||||||||||| |||||||| ||||||| ||    
T  44617985 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtca 44617886  T
Q  349 cgtgtta 355  Q
    | |||||    
T  44617885 cctgtta 44617879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 24472679 - 24472587
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||||||||| |||||||| || |||||| |||||||||| | || ||| || ||||| |||||||||||||||| |||||||||    
T  24472679 ctaagttttgcatctgtggcagttttggccgccaatgccaattttgactccgtctacactaacgtggcaccctaagtgaggtgccacgtgtta 24472587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 25411609 - 25411701
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtga 341  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||||||  |||||||||| | || || ||||||||| |||| |||||||    
T  25411609 tacaaaaccgccccctaagttttgcatctgtggcagttttcacccccaataccaattttgactcggtctatgctgacgtggcaccataagtga 25411701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 5008531 - 5008441
Alignment:
Q  252 aaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgag 342  Q
    ||||||| |||||||||||||||| |||| || ||||| ||| ||| |||||||||||| | || |||||||||||| |||||||||||||    
T  5008531 aaaaccgtcctctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgag 5008441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 6592724 - 6592899
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnct----acaaaaccgccctctaagttttgcatct 277  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||| | | |||||        |    ||||||| |||| ||||||||||||| |    
T  6592724 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttgaccccctaagaagatttttttttacaaaactgccc-ctaagttttgcatat 6592822  T
Q  278 gtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    ||| |||||||| ||| |||||  ||||||||| |||| ||||||||| |  |||||||||||||||| ||||||||    
T  6592823 gtggcagttttggccctcaatgctaattttgactcagtctacgctgacattgcaccctaagtgaggtgccacgtgtt 6592899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 25333499 - 25333670
Alignment:
Q  183 ggcttaatagcagttttaacccct-aactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    ||||||||| || ||||||||||| ||||||| |||||||||||||||||  |  ||||       ||| |||||| ||| |||||||||||| |||||     
T  25333499 ggcttaataacaattttaaccccttaacttttccaaagttgcgattttggtcccttaagaaaaaaactataaaaccaccccctaagttttgcacctgtgg 25333598  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    ||||||||  | |||| | ||||||||||   || |||||||||||| |||||||||| ||||| |||||||    
T  25333599 cagttttggtctccaaggccaattttgacttggtctacgctgacgtggcaccctaagtaaggtgccacgtgt 25333670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 437
Target Start/End: Original strand, 31827525 - 31827779
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtg 280  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||| | | |||||        |||||||| | ||| ||||| ||||||||||||    
T  31827525 ggcttaatagcagttttaactccctaacttttccaaagttgtgattttgcccccctaagaaaaaagactacaaaatcaccccctaagctttgcatctgtg 31827624  T
Q  281 acagttttgaccccc-aatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgttannnnnnnnnnnnnnnnnnatcaaa 379  Q
     |||||||| ||||| ||  ||||||||||  | || |||||||||||| |||||||||||||||| ||| ||||                   | ||||    
T  31827625 ccagttttggccccccaaaatcaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacatgtt--tttttttttttttttttaccaaa 31827722  T
Q  380 aattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  31827723 aattggccttggg-ggccaaaactgctacagttgcaaaacttagggggtgattttgta 31827779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 354
Target Start/End: Original strand, 34760914 - 34761020
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||| |||| |||||||| |||||||   ||||||||||   || || ||||||||| |||||||||||||||| |    
T  34760914 ctacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgacgtggtctatgctgacgtggcaccctaagtgaggtgtc 34761013  T
Q  348 acgtgtt 354  Q
    || ||||    
T  34761014 acatgtt 34761020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 8857233 - 8857293
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||    
T  8857233 caaaaattgaccttgg-aggccaaaactgctatagttgcaaaacttatggggcaattttgta 8857293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 4576854 - 4576683
Alignment:
Q  183 ggcttaatagcagtttta-acccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||| |  |||        ||||||||  | ||  |||||||||| |  ||||    
T  4576854 ggcttaatagcagttttagacccctaactttc-caaagttgcgattttggccccttaa-taaaaaactacaaaattgtcccttaagttttgcgttcgtga 4576757  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| |||||| || |||||||||| | || ||||||| |||| |||||||||||||||| |||||||||    
T  4576756 cagttttggcccccactgccaattttgactcggtctacgctggcgtggcaccctaagtgaggtgccacgtgtta 4576683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 4925506 - 4925613
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||||||| || ||||||||||||| |||| ||||||||||||| ||   ||||||||   | || |||||||||||| |||||||||| ||||| |    
T  4925506 ctacaaaaccgtcccctaagttttgcatatgtggcagttttgacccctaagaccaattttggttctgtctacgctgacgtggcaccctaagtaaggtgcc 4925605  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  4925606 acgtgtta 4925613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 8553774 - 8553684
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||| |||| |||||||| | ||||| |||||||| ||| | || || |||||||||||||||||||||||||| |||||||||    
T  8553774 taagttttgcatttgtggcagttttgtctcccaaagtcaattt-gactcggtctatgctgacgtgacaccctaagtgaggtgccacgtgtta 8553684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 8857114 - 8857220
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgaca 348  Q
    ||||||||||||  ||||||||||||| |||| |||||||| ||||||||| ||||||||||   ||  ||||||| ||| |||| ||| ||||||| ||    
T  8857114 tacaaaaccgcctcctaagttttgcatttgtggcagttttggcccccaatgccaattttgacttggtcaacgctgatgtggcaccttaaatgaggtgcca 8857213  T
Q  349 cgtgtta 355  Q
    |||||||    
T  8857214 cgtgtta 8857220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 4576671 - 4576611
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  4576671 caaaaattggtcttggg-ggccaaaactgctacagttgcaaaacttatgggacgattttgta 4576611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 39918627 - 39918688
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||||| |||||| |||||||    
T  39918627 caaaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgta 39918688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 41196539 - 41196370
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||    ||  ||        |||||||| | ||  |||||||||||| ||||      
T  41196539 ggctttatagcagttttaacccttaactttttcaaagttgtgattttga---tcccagaaaaaaattacaaaactgtcccttaagttttgcatatgtgga 41196443  T
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||  |||||||||||||||| |||   || |||||||||||| |||||||||||||||| ||| |||||    
T  41196442 agtttttgcccccaatgtcaatttagacttggtctacgctgacgtggcaccctaagtgaggtgccacatgtta 41196370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 32969624 - 32969716
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtg 340  Q
    |||||||| ||||| ||||||||| ||| |||| |||||||| | ||||| | |||||||||| | || |||||||||||||| |||||||||    
T  32969624 ctacaaaatcgccccctaagtttttcatttgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtgacgccctaagtg 32969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 18969341 - 18969234
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||| || ||||||| ||||| || |||| | |||||||||||||| | ||||||||||   |  |||||||||||||||| |||| ||||||| |    
T  18969341 ctacaaaatcgtcctctaaattttgtatttgtggctgttttgacccccaaggccaattttgactaggcctacgctgacgtgacactctaaatgaggtgtc 18969242  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  18969241 acgtgtta 18969234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 24306250 - 24306159
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||||  |||||||||| || ||||||| ||||||||||||    | |||||||| |||||||||||||||||||| ||| |||||    
T  24306250 taagttttgcacatgtgacagttctggcccccaaggtcaattttgacttgatctacgctgatgtgacaccctaagtgaggtgtcacatgtta 24306159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 6510196 - 6510246
Alignment:
Q  387 cttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  6510196 cttggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 6510246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 25452 - 25501
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaa 297  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  25452 ctacaaaaccgccccctaagttttgcacctgtggcagttttgacccccaa 25501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 19206269 - 19206208
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||| |||| | |||||||    
T  19206269 caaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgta 19206208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 34679290 - 34679339
Alignment:
Q  388 ttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  34679290 ttggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 34679339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 35718712 - 35718805
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtga 341  Q
    ||||||||||| || |||  ||||||||||||| |||||||| || |||| | |||||||||| |||| |||| ||| ||| ||||||||||||    
T  35718712 ctacaaaaccgtcccctacattttgcatctgtggcagttttggcctccaaggccaattttgactcagtctacggtgatgtggcaccctaagtga 35718805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 35718842 - 35718902
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||| || |||||||    
T  35718842 caaaaattgaccttagg-ggccaaaactgctacagttgcaaaacttaggggacggttttgta 35718902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 5362407 - 5362315
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaat-gtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| || ||||| |||||||| || ||||  | |||||||||| |||| ||||||||||||||| ||||||||||||| ||| |||||    
T  5362407 taagttttacaactgtggcagttttggcctccaaaagccaattttgactcagtctacgctgacgtgacatcctaagtgaggtgccacatgtta 5362315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 4925650 - 4925692
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  4925650 ggccaaaactgctacagttgcaaaactta-ggggcgattttgta 4925692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 19895741 - 19895685
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgatttt 434  Q
    ||||||||| ||||||||  |||||||||||| ||||||||||||||||| ||||||||    
T  19895741 caaaaattggccttggga--ccaaaactgctatagttgcaaaacttatggtgcgatttt 19895685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 19895845 - 19895754
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||| ||| |||| |||||||  ||||||||| |||||||||  | ||||| ||||||||  |||||||||||||||| || ||||||    
T  19895845 taagttttacatatgtggcagttttagcccccaatgccaattttgattcggtttatgctgacgtagcaccctaagtgaggtgccatgtgtta 19895754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 16043269 - 16043207
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    ||||| |||||||| ||| |||||||||||||| |||||||| ||||||| | ||||||||||    
T  16043269 ctacagaaccgccccctatgttttgcatctgtggcagttttggcccccaaggccaattttgac 16043207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 24498106 - 24498152
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgatttt 229  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  24498106 ggcttaatagcagttttagcccctaattttttcaaagttgtgatttt 24498152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 37431734 - 37431784
Alignment:
Q  387 cttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||| |||||||| |||||||||||||||||||| |||||| |||||||    
T  37431734 cttggggggccaaaaatgctacagttgcaaaacttaaggggcggttttgta 37431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 5470455 - 5470395
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||| |||||  |||||||    
T  5470455 caaaaattggccttggg-ggccaaaactgctacaattgcaaaacttagggggcagttttgta 5470395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 6510278 - 6510200
Alignment:
Q  217 aagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacagttttgaccccc 295  Q
    |||||||||||||||||| |||||       |||||||||||||| |||||||||||| ||||  |||||||| |||||    
T  6510278 aagttgcgattttggcaccctaagaaaaaagctacaaaaccgccccctaagttttgcaactgtagcagttttggccccc 6510200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 6592920 - 6592980
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||||| |||||  |||||||    
T  6592920 caaaaattggctttggg-ggccaaaactgctacagttgcaaaacttagggggcagttttgta 6592980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 16238468 - 16238407
Alignment:
Q  249 tacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    |||||||| |||| ||| || ||| |||| ||||||||||| ||||||||||||||||||||    
T  16238468 tacaaaacagccccctatgtattggatctttgacagttttggcccccaatgtcaattttgac 16238407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 18709373 - 18709312
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| |||||   |||||||||||||| |||||||||||||| |||| |||||||||    
T  18709373 caaaaattggccttgttgggccaaaactgctatagttgcaaaacttagggggtgattttgta 18709312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 19399489 - 19399440
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttgg 231  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  19399489 ggcttaatagcagttttagccccctaactttttcaaagttgtgattttgg 19399440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 21361881 - 21361930
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggc 232  Q
    |||||||||||| ||||  ||||||||||| |||||||||||||||||||    
T  21361881 ggcttaatagcaatttttgcccctaactttatcaaagttgcgattttggc 21361930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 25092382 - 25092459
Alignment:
Q  268 ttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtg 345  Q
    ||||||||||||||| |||||| |||| || |||||||||||| | ||  | ||||||||| || |||||||||||||    
T  25092382 ttttgcatctgtgaccgttttgtccccgaaagtcaattttgactcggtcaatgctgacgtggcatcctaagtgaggtg 25092459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 36715608 - 36715559
Alignment:
Q  183 ggcttaatagcagttttaac-ccctaactttttcaaagttgcgattttgg 231  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  36715608 ggcttaatagcagttttagctccctaacttttttaaagttgcgattttgg 36715559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 43028979 - 43029040
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| ||||| | |||||||||||||||| ||| |||||||| |||||| |||||||    
T  43028979 caaaaattggccttgtggggccaaaactgctacaattgtaaaacttagggggcggttttgta 43029040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 14489415 - 14489458
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||| |||||||||||||||| |||| |||||||||    
T  14489415 ggccaaaactgccacagttgcaaaacttagggggtgattttgta 14489458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 18709486 - 18709399
Alignment:
Q  264 taagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    ||||||||||| ||||  || |||||   ||||||||||||||| || | || || |||||||||||||| ||||||||||| |||||    
T  18709486 taagttttgcaactgtagcaattttggttcccaatgtcaattttaactcggtctatgctgacgtgacaccttaagtgaggtgccacgt 18709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 32969728 - 32969771
Alignment:
Q  394 ggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||    
T  32969728 ggccaaaactgctactgttgcaaaacttagggggcggttttgta 32969771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 40711513 - 40711478
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  40711513 acgctgacgtgacaccctaagtgaggtgccacgtgt 40711478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 16043089 - 16043139
Alignment:
Q  183 ggcttaatagcagttttaacccctaacttttt-caaagttgcgattttggc 232  Q
    ||||||||| |||||||| ||||||||||||| |||||||||| |||||||    
T  16043089 ggcttaataacagttttatcccctaactttttccaaagttgcggttttggc 16043139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 25375187 - 25375137
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||||||||||    
T  25375187 ggcttaatagcagttttagccccctaattttttcaatgttgcgattttggc 25375137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 27489621 - 27489667
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||| ||||| ||||||| || ||||||||||||||||||||||||||    
T  27489621 caagaattggccttggggggtcaaaactgctacagttgcaaaactta 27489667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 426
Target Start/End: Original strand, 37803317 - 37803366
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggg 426  Q
    ||||||||| ||||||| |  ||||||||||||||||||||||||||||||    
T  37803317 caaaaattggccttggg-gatcaaaactgctacagttgcaaaacttatggg 37803366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 44617859 - 44617814
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||||||||| | | |||||||||||||||||||||||||    
T  44617859 caaaaattgaccttggg-gactaaaactgctacagttgcaaaactta 44617814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 2936965 - 2936928
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  2936965 acgctgacgtggcaccctaagtgaggtgccacgtgtta 2936928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 19399370 - 19399317
Alignment:
Q  302 aattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||| | || |||||||||||| |||||||||||||||  |||||||||    
T  19399370 aattttgactcggtctacgctgacgtggcaccctaagtgaggttccacgtgtta 19399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 24306016 - 24306122
Alignment:
Q  183 ggcttaatagcagttttaacccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgac 282  Q
    ||||||||| |||||||    |||||||||| | ||||||||||||| |  |||||||       ||||||||||| | ||||||||||||| |||| ||    
T  24306016 ggcttaataacagttttttttcctaacttttacgaagttgcgattttagtcctctaagaaaaaaactacaaaaccgtcttctaagttttgcaactgtaac 24306115  T
Q  283 agttttg 289  Q
    |||||||    
T  24306116 agttttg 24306122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 36195773 - 36195720
Alignment:
Q  301 caattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtt 354  Q
    |||||||||| | || |||||||||||| |||||||||||||||| || |||||    
T  36195773 caattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgtt 36195720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 19399183 - 19399231
Alignment:
Q  184 gcttaatagcagttttaacc-cctaactttttcaaagttgcgattttgg 231  Q
    ||||||||||| ||||| || ||||||||| ||||||||||||||||||    
T  19399183 gcttaatagcaattttagcctcctaactttctcaaagttgcgattttgg 19399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 32013248 - 32013291
Alignment:
Q  378 aaaattgaccttgggaggccaaaactgctacagttgcaaaactta 422  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||    
T  32013248 aaaattgaccttgag-ggccaaaactgctacatttgcaaaactta 32013291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 42445508 - 42445544
Alignment:
Q  317 tacgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||| |||||||||||||||| |||||||    
T  42445508 tacgctgacgtggcaccctaagtgaggtgccacgtgt 42445544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 76929 - 77035
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    ||||||| |||||| ||||||||||||| |||| |||||||| ||||||| | |||||||||| | || |||||||||||| |||||||||||||||| |    
T  76929 ctacaaagccgccccctaagttttgcatttgtggcagttttg-cccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtc 77027  T
Q  348 acgtgtta 355  Q
    ||||||||    
T  77028 acgtgtta 77035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 77046 - 77107
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| || |||  |||||||||||||||||||| |||||||| ||| ||||||||||    
T  77046 caaaaattggccgtggagggccaaaactgctacagttgtaaaacttaggggacgattttgta 77107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 77175 - 77125
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggc 232  Q
    |||||||||| |||||||||| ||||||||||| ||||||||| |||||||    
T  77175 ggcttaatagtagttttaaccgcctaacttttttaaagttgcggttttggc 77125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 351
Target Start/End: Original strand, 19915 - 20083
Alignment:
Q  184 gcttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||||||| ||| ||||| ||||||| ||||||||| | |||||        |||||||| || || ||||||||||||||||||     
T  19915 gcttaatagcagttttaaccccctaaattttttaaagttgtgattttggccc-ctaagaaaaaaaactacaaaatcgtccactaagttttgcatctgtgg 20013  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||||||| ||||||| | |||||||||| |  | |||||| ||||| |||||||||||||||| |||||    
T  20014 cagttttggcccccaaagccaattttgactcgatctacgctaacgtggcaccctaagtgaggtgtcacgt 20083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 9415 - 9585
Alignment:
Q  186 ttaatagcagttttaacccc-taactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    ||||||||||||||| |||| ||| |||  |||||||| |||||| || |||||||       ||||||||||| || ||||||||||||| |||| |||    
T  9415 ttaatagcagttttagccccctaattttcccaaagttgtgatttttgccctctaagaaaaaaactacaaaaccgtcccctaagttttgcatatgtggcag 9514  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||  ||||||| | |||||||||| | || || |||||||||||| | ||| ||||||| |||||||||    
T  9515 ttttagcccccaaggccaattttgactcggtctaggctgacgtgacatcttaaatgaggtgccacgtgtta 9585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 9606 - 9667
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| |||| || | ||| ||| ||||||||||||||||||| |||||| |||||||    
T  9606 caaaaattggccttcggggaccagaaccgctacagttgcaaaacttaaggggcggttttgta 9667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 3068 - 2905
Alignment:
Q  186 ttaatagcagttttaac-ccctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtgacag 284  Q
    |||||||||||||||   |||||||||| |||||||||||||||||  || |||||       ||| ||||| ||||| |||||||||||| ||||||||    
T  3068 ttaatagcagttttagttccctaactttctcaaagttgcgattttg--accctaagaaaaaaactaaaaaactgccctttaagttttgcatatgtgacag 2971  T
Q  285 ttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    |||||  |||||| | |||||||||| |||| |||  |||||||||||||||| |||| || |||||    
T  2970 ttttg-gccccaaagccaattttgactcagtctactttgacgtgacaccctaaatgagatgccacgt 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 3146 - 3236
Alignment:
Q  252 aaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgag 342  Q
    ||||||| |||||||||||||||| |||| || ||||| ||| ||| |||||||||||| | || |||||||||||| |||||||||||||    
T  3146 aaaaccgtcctctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgag 3236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 202 - 355
Target Start/End: Original strand, 145373 - 145527
Alignment:
Q  202 cccctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgt 300  Q
    ||||||||||| ||||||||||||||||| | | |||||        ||||||| ||||||  ||| ||||||||||||| |||||||| ||||||| |     
T  145373 cccctaactttctcaaagttgcgattttgcccccctaagaaaaaaaactacaaagccgccccttaaattttgcatctgtggcagttttggcccccaaggc 145472  T
Q  301 caattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    |||||||||| | || || |||||| ||  ||||||||||||||| |||||||||    
T  145473 caattttgactcggtctaggctgacatggaaccctaagtgaggtgccacgtgtta 145527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 9678 - 9618
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  9678 caaaaattgatcttggg-ggccaaaactactacagttgcaaaacttaaggggcgattttgta 9618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 4199 - 4260
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||||||||| |  || |||||||||||||||||||||||||| |||||| |||||||    
T  4199 caaaaattgaccttagagggtcaaaactgctacagttgcaaaacttagggggcggttttgta 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 4261 - 4216
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgaccc 293  Q
    |||||||||||||| |||||||||||| ||||  ||||||||||||    
T  4261 ctacaaaaccgccccctaagttttgcaactgtagcagttttgaccc 4216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 355
Target Start/End: Original strand, 9439 - 9511
Alignment:
Q  283 agttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||| |||||||  ||||||||||| | || |||||||||||| || ||||||||||||| |||||||||    
T  9439 agttttggcccccaagatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgtcacgtgtta 9511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 9534 - 9578
Alignment:
Q  389 tgggaggccaaaactgctacagttgcaaaacttatggggcgattt 433  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||    
T  9534 tggggggctaaaactgctacagttgcaaaacttagggggcgattt 9578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 351
Target Start/End: Original strand, 124 - 292
Alignment:
Q  183 ggcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnnctacaaaaccgccctctaagttttgcatctgtga 281  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||| || | || ||       |||||||| || |  |||| |||||||  ||||     
T  124 ggcttaatagcagttttagcctcctaactttctcaaagttgcgatttttgctccctgagataaaaactacaaaaacgtctcctaaattttgcacttgtgg 223  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgt 351  Q
    ||||||||  || ||| |  ||||||||| | || ||| ||||||||||||||||||||||||| |||||    
T  224 cagttttg-gccacaaggcgaattttgactcggtctacactgacgtgacaccctaagtgaggtgccacgt 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 19652 - 19605
Alignment:
Q  186 ttaatagcagttttaa-cccctaactttttcaaagttgcgattttggc 232  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  19652 ttaatagcagttttagtcccctaactttttcaaagttgcgattttggc 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 19276 - 19170
Alignment:
Q  248 ctacaaaaccgccctctaagttttgcatctgtgacagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgac 347  Q
    |||||||||||||| ||||||||||||  ||||  ||||||| ||||||| | |||||||| | | || ||||||||| |  ||||||| |||||||  |    
T  19276 ctacaaaaccgccccctaagttttgcacatgtggtagttttggcccccaaggccaattttggctcggtctacgctgacatagcaccctacgtgaggtacc 19177  T
Q  348 acgtgtt 354  Q
    |||||||    
T  19176 acgtgtt 19170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 19158 - 19107
Alignment:
Q  386 ccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||||||||| ||||||| ||||||||||||| ||| || |||||||    
T  19158 ccttgggaggccaaatctgctacggttgcaaaacttaggggacggttttgta 19107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 203408 - 203361
Alignment:
Q  263 ctaagttttgcatctgtgacagttttgacccccaatgtcaattttgac 310  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  203408 ctaagttttgcatttgtgacagttttggcccccaaagtcaattttgac 203361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 203317 - 203256
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    |||||||| |||||||  |||||||||| |||||||||||||| ||| | |||| |||||||    
T  203317 caaaaatttaccttggagggccaaaacttctacagttgcaaaatttaggaggcggttttgta 203256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 21659 - 21830
Alignment:
Q  184 gcttaatagcagttttaacc-cctaactttttcaaagttgcgattttggcactctaagnnnnnnn-ctacaaaaccgccctctaagttttgcatctgtga 281  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||| | | |||||        ||||||||||| | |||||||||||| ||| ||     
T  21659 gcttaatagtagttttagcctcctaacttttttaaagttgcgattttgtc-cactaagaaaaaaaactacaaaaccgtc-tctaagttttgcctctatgg 21756  T
Q  282 cagttttgacccccaatgtcaattttgacccagtttacgctgacgtgacaccctaagtgaggtgacacgtgtta 355  Q
    ||||||||   |||||   |||||||||| | || |||||||||||| ||||| ||||||| || |||||||||    
T  21757 cagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgtta 21830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 79127 - 79162
Alignment:
Q  318 acgctgacgtgacaccctaagtgaggtgacacgtgt 353  Q
    |||||||||||||||||||||||||||| |||||||    
T  79127 acgctgacgtgacaccctaagtgaggtgccacgtgt 79162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 3639 - 3689
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    |||||||||||||||||| |||| |||||||  ||||||||||||||||||    
T  3639 ggcttaatagcagttttagccccctaactttcccaaagttgcgattttggc 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 3639 - 3689
Alignment:
Q  183 ggcttaatagcagttttaacccc-taactttttcaaagttgcgattttggc 232  Q
    |||||||||||||||||| |||| |||||||  ||||||||||||||||||    
T  3639 ggcttaatagcagttttagccccctaactttcccaaagttgcgattttggc 3689  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 93987 - 94048
Alignment:
Q  376 caaaaattgaccttgggaggccaaaactgctacagttgcaaaacttatggggcgattttgta 437  Q
    ||||||||| | ||||  |||| |||||||||||||| ||||||||||||| || |||||||    
T  93987 caaaaattggcattggagggcctaaactgctacagttacaaaacttatgggacggttttgta 94048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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