View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1566_low_32 (Length: 243)
Name: NF1566_low_32
Description: NF1566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1566_low_32 |
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[»] scaffold0265 (2 HSPs) |
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[»] scaffold0362 (1 HSPs) |
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[»] scaffold0096 (1 HSPs) |
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[»] scaffold0084 (1 HSPs) |
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[»] scaffold0034 (1 HSPs) |
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[»] scaffold0002 (2 HSPs) |
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[»] scaffold0042 (2 HSPs) |
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[»] scaffold0083 (1 HSPs) |
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[»] scaffold0058 (2 HSPs) |
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[»] scaffold0170 (1 HSPs) |
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[»] scaffold0008 (2 HSPs) |
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[»] scaffold0299 (1 HSPs) |
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[»] scaffold0933 (1 HSPs) |
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[»] scaffold0280 (1 HSPs) |
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[»] scaffold0026 (1 HSPs) |
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[»] scaffold0989 (1 HSPs) |
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[»] scaffold0007 (1 HSPs) |
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[»] scaffold0150 (1 HSPs) |
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[»] scaffold0111 (1 HSPs) |
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[»] scaffold0192 (1 HSPs) |
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[»] scaffold0013 (1 HSPs) |
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[»] scaffold0011 (1 HSPs) |
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[»] scaffold0063 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 47295881 - 47295748
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
47295881 |
cagagagtgagggtttgagaggaagaaagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
47295782 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |
|
|
T |
47295781 |
caccttactctgacggttacgaaatcgtgggaag |
47295748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 21593077 - 21592944
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| |
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|
T |
21593077 |
cagagagtgagggttttagaggaagaaagcttctaccttggggactgcattgagtcccctatttatagaggtggagggctgctgagccgttgtaatggca |
21592978 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||||||||||| ||||||||||||| |
|
|
T |
21592977 |
caccttactctgacggttacaaaatcgtgggaag |
21592944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 18153131 - 18153261
Alignment:
Q |
14 |
agagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacac |
113 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||||| ||| ||||||||| ||||| |
|
|
T |
18153131 |
agagtgagggtttgagaggaagaaagattctaccttggggaatgcattgagtcccctatttatagaggtggagggctgccgagtcgttgtaatggcacag |
18153230 |
T |
|
Q |
114 |
cttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||||||||||||| |||||||| |
|
|
T |
18153231 |
cttactctgacggttacgaaatggtgggaag |
18153261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 18185624 - 18185757
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||| | ||||||||||||||||||||| ||| ||| |
|
|
T |
18185624 |
cagagagtgagggtttgagaggaagaaagattctacgctggggactgcattgagtcccctattaataaatgtggagggctgcagagccgttttaacggca |
18185723 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||||||||||||| |||||| |
|
|
T |
18185724 |
caccttactctgacggttacgaaatcgcgggaag |
18185757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 30770384 - 30770257
Alignment:
Q |
14 |
agagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcac |
111 |
Q |
|
|
||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| |||||| ||||||||||||||||||| |||| |
|
|
T |
30770384 |
agagtgagggttt-agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcagagccgttgtaatggcac |
30770286 |
T |
|
Q |
112 |
accttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
|||| ||||| ||||||||||||||||| |
|
|
T |
30770285 |
acctggctctggcggttacgaaatcgtgg |
30770257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 31209916 - 31209993
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgtggtg |
232 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
T |
31209916 |
aaataataatcatcatatataaatagaagcatcaataaaatatagataaaagagagaacaataaacttatctgtggtg |
31209993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 29164848 - 29164982
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| ||||| |||||||||||||||||||| |
|
|
T |
29164848 |
cagagagtgagggttt-agaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggacggctgcagagccgttgtaatga |
29164946 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| ||||||||||||||||||| |
|
|
T |
29164947 |
cacacctgactctagaagttacgaaatcgtgggaag |
29164982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 20093566 - 20093669
Alignment:
Q |
41 |
ttctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
||||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||||| | || ||||||||||||||||| |
|
|
T |
20093566 |
ttctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggccctagcggttacgaaatcgtgg |
20093665 |
T |
|
Q |
141 |
gaag |
144 |
Q |
|
|
|||| |
|
|
T |
20093666 |
gaag |
20093669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 21802450 - 21802583
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| || ||||||| ||||||||||||||| || |
|
|
T |
21802450 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggttgagggctacagagccgttgtaatggc |
21802548 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| |||||||||||||| ||||| |
|
|
T |
21802549 |
acacctggctctggtggttacgaaatcgtaggaag |
21802583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 22703896 - 22704000
Alignment:
Q |
12 |
agagagtgagggtttgagagga--agaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| |||||| ||| |||||||||||||| |||||| |||||| | |||||||||| |||||||||||||||||||||||||| || |
|
|
T |
22703896 |
agagagtgagggttt-agaggacgagatagattctaccttggggactgctgtgagtcccatatttatagaggtggagggctgcagagccgttgtaatggc |
22703994 |
T |
|
Q |
110 |
acacct |
115 |
Q |
|
|
|||||| |
|
|
T |
22703995 |
acacct |
22704000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 31206478 - 31206557
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaa--agggagaacaataaacttatctgtggtg |
232 |
Q |
|
|
|||||||||||||||||||||| |||||||||| |||||||||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
31206478 |
aaataataatcatcatatataaatagaagcatcgataaaatatagctaaaagagagagaacaataaacttatctgtggtg |
31206557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 9549168 - 9549035
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | |||| |||||||| |||| | ||||||| ||| |||||| | |||||||||||||||||||||||| || |
|
|
T |
9549168 |
agagagtgagggttt-agaggaagagatagattttaccttggggactactttgagtcccctttttataaaggtggagggctgcagagccgttgtagaggc |
9549070 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||| ||||||||||||||||||||| |
|
|
T |
9549069 |
acacctggctctagcggttacgaaatcgtgggaag |
9549035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 7595406 - 7595482
Alignment:
Q |
68 |
cctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||| ||||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||||| |
|
|
T |
7595406 |
cctatttatagaggtggagggctgcaaagccgttgtaatagcacacctggcgctggatgttacgaaatcgtgggaag |
7595482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 2250193 - 2250059
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
||||||||||| |||| ||||||||| | |||||||| |||| | ||| |||||| ||||| |||||| |||||||| ||||||||||||||||| | |
|
|
T |
2250193 |
cagagagtgagagttttagaggaagagatagattctacattggggtttgctatgagtcccctatatatagaggtggagggttgcagagccgttgtaatgg |
2250094 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaa |
143 |
Q |
|
|
|||||| || || ||||||| |||||||||||| |
|
|
T |
2250093 |
cacaccaggctttggcggttacaaaatcgtgggaa |
2250059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 22705649 - 22705732
Alignment:
Q |
61 |
tgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| | |||||||||| ||||||| |||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||||| |
|
|
T |
22705649 |
tgagtcccgtatttatagaggtggaggactgcagagccattgtaatggcacacctggctctggcggttacgaaatcatgggaag |
22705732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 2609485 - 2609557
Alignment:
Q |
154 |
taaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatct |
226 |
Q |
|
|
||||||||||||| ||| ||||| || |||| ||||||||||||| |||||| ||||||||||||||||||| |
|
|
T |
2609485 |
taaataataatcaacatttataaatataagcctcaataaaatataggtaaaagagagaacaataaacttatct |
2609557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 28794227 - 28794094
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaa-agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
|||||| ||||||||| ||||| |||| |||||||||||||| ||||| ||||| ||||| |||| | ||| ||||||| |||||||||||| || |
|
|
T |
28794227 |
cagagaatgagggttt-agagggagaatagattctaccttggggactgttaagagtcccctatatataaaggtgagtggctgcatagccgttgtaatggc |
28794129 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||| | |||||||||||||||||||||||||| |
|
|
T |
28794128 |
acacgtgtgtctgacggttacgaaatcgtgggaag |
28794094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 30765110 - 30765047
Alignment:
Q |
81 |
gtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||| |||||| | |||||||| || ||||| ||||||||||||||||| |
|
|
T |
30765110 |
gtggagggctgcagagctgttgtagtggcacacctaggtccgacgggtacgaaatcgtgggaag |
30765047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 38612620 - 38612690
Alignment:
Q |
74 |
tatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||||| |||||||||||||||||| | ||||| ||||| ||||||| ||||||||||||| |
|
|
T |
38612620 |
tatagaggtggagatctgcagagccgttgtaatggtacaccaggctctggcggttacaaaatcgtgggaag |
38612690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 29095214 - 29095084
Alignment:
Q |
14 |
agagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacac |
113 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
T |
29095214 |
agagtgagggtttgagaggaagaaagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacac |
29095115 |
T |
|
Q |
114 |
cttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
29095114 |
ctaactctgacggttacgaaatcgtgggaag |
29095084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 7968672 - 7968565
Alignment:
Q |
33 |
aagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacga |
132 |
Q |
|
|
|||| ||||||| |||||| |||||||||||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||| |||||| ||||||||| |
|
|
T |
7968672 |
aagatagattctgccttggggactgcattgagtcccctatatatagaggtggagggctgcagagctgttgtaatggcacacctgactctggcggttacga |
7968573 |
T |
|
Q |
133 |
aatcgtgg |
140 |
Q |
|
|
||| |||| |
|
|
T |
7968572 |
aattgtgg |
7968565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 18014656 - 18014524
Alignment:
Q |
13 |
gagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||| |||||| |||||||||||||||||||||||||| ||| |
|
|
T |
18014656 |
gagagtgagggtta-agaggaagagattgattctaccttggggactgctatgagtcccctacatatagaggtggagggctgcagagccgttgtaatggca |
18014558 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| ||||||||||||||||||||| |
|
|
T |
18014557 |
cacctagctctggcggttacgaaatcgtgggaag |
18014524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 19860222 - 19860118
Alignment:
Q |
40 |
attctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg |
139 |
Q |
|
|
|||||||||||| |||||| |||||| |||||||||||| |||||||||||| ||||||||||||| | |||||| ||||| |||||||||||||||| |
|
|
T |
19860222 |
attctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcggagccgttgtaatgggacacctggctctggcggttacgaaatcgtg |
19860123 |
T |
|
Q |
140 |
ggaag |
144 |
Q |
|
|
||||| |
|
|
T |
19860122 |
ggaag |
19860118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 4409196 - 4409329
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| ||||||||||| || ||||||||||| ||||||||||||| ||||||| ||| || |
|
|
T |
4409196 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgcattgaatcctctatttatagaggtggagggctgcaaagccgttacaatggc |
4409294 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| ||||||| |||||||| |||| |
|
|
T |
4409295 |
acaccttgctctggcggttacaaaatcgtgagaag |
4409329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 8306064 - 8306170
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcac |
111 |
Q |
|
|
||||||||||||||| ||||||||| ||||||||||||| |||||| |||||| |||||||||||| |||||||| ||||||||||||||||| |||| |
|
|
T |
8306064 |
agagagtgagggttt-agaggaaga--gattctaccttggggactgctgtgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcac |
8306160 |
T |
|
Q |
112 |
accttactct |
121 |
Q |
|
|
|||| ||||| |
|
|
T |
8306161 |
acctgactct |
8306170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 12738494 - 12738628
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
||||||||| |||||| ||||||||| | |||||||||| || |||||| |||||| |||||||||||| |||||||| ||||||||||||||||| | |
|
|
T |
12738494 |
cagagagtgggggttt-agaggaagagatagattctacctaggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatgg |
12738592 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||| || || ||||| |||||||||||||||||| |
|
|
T |
12738593 |
cacatctggctatgacgattacgaaatcgtgggaag |
12738628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 18736029 - 18736133
Alignment:
Q |
40 |
attctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg |
139 |
Q |
|
|
|||||| ||||| |||||| |||||| |||||||||||| |||||||||||| ||||||||||||| |||||||| ||||| |||||||||||| ||| |
|
|
T |
18736029 |
attctagcttggggactgctatgagtcccctatttatagaggtggagggctgctgagccgttgtaatggcacacctggctctggcggttacgaaattgtg |
18736128 |
T |
|
Q |
140 |
ggaag |
144 |
Q |
|
|
||||| |
|
|
T |
18736129 |
ggaag |
18736133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 23574393 - 23574523
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | |||||||||||| |||||| ||||||| |||||||||||| || ||||||||||||||||||||||| | |
|
|
T |
23574393 |
cagagagtgagggttt-agaggaagagatagattctaccttgtggactgctttgagtcccctatttatagaggtagagggctgcagagccgttgtaatgg |
23574491 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
||||| | ||||| | |||||||| |||||| |
|
|
T |
23574492 |
cacacttggctctggctgttacgaagtcgtgg |
23574523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 18043340 - 18043472
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaaga--ttctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | | ||||||||||| ||||||||| |||| |||||||||||| ||||||||||||| |||||||||||| | |
|
|
T |
18043340 |
agagagtgagggttt-agaggaagagataaattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcaaagccgttgtaatgac |
18043438 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaa |
143 |
Q |
|
|
|| | | |||||| ||| ||||||||| |||||| |
|
|
T |
18043439 |
acgcatgactctggcgggtacgaaatcatgggaa |
18043472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 18258795 - 18258661
Alignment:
Q |
11 |
cagagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
|||||||||||||||| |||| || | |||||||||||||| ||||| |||||| |||||||||||| || |||||||| |||||||||||| | || |
|
|
T |
18258795 |
cagagagtgagggtttagagaaaaatatagattctaccttggagactgttgtgagtcccctatttatagaggtagagggctgtagagccgttgtagtggc |
18258696 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||||| ||||||||||| |||||||| |
|
|
T |
18258695 |
acacctggctctgatggttacgaaattgtgggaag |
18258661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 14910604 - 14910739
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaaga--aaga-ttctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaata |
107 |
Q |
|
|
|||||||||||||||| ||||||||| ||| ||||||||||| ||||||| |||||| ||||| |||||| ||||||||||||| |||||||||||| |
|
|
T |
14910604 |
cagagagtgagggttt-agaggaagagctagatttctaccttggggactgcagtgagtcccctatatatagaggtggagggctgcaaagccgttgtaatg |
14910702 |
T |
|
Q |
108 |
gcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| | ||||| | |||||||||| |||||||| |
|
|
T |
14910703 |
gcacacatcgctctggcagttacgaaattgtgggaag |
14910739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 15349800 - 15349695
Alignment:
Q |
39 |
gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgt |
138 |
Q |
|
|
|||||||| |||| |||||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |
|
|
T |
15349800 |
gattctacgttggggactgctaagagtcccctatatatagaggtggagggctgcagagccgttgtgatagcacacctgggtctggcggttacgaaatcgt |
15349701 |
T |
|
Q |
139 |
gggaag |
144 |
Q |
|
|
|||||| |
|
|
T |
15349700 |
gggaag |
15349695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 29482590 - 29482724
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
||||||||| |||||| ||||||||| | ||||||||||||| |||| | |||||| |||||||||||| ||||||||||| |||| ||||||||| | |
|
|
T |
29482590 |
cagagagtgggggttt-agaggaagagatagattctaccttggggactactatgagtcccctatttatagaggtggagggctgtagagtcgttgtaatgg |
29482688 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||| ||||||||||||||||||||| |
|
|
T |
29482689 |
cacacctggttctagcggttacgaaatcgtgggaag |
29482724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 17757140 - 17757084
Alignment:
Q |
88 |
gctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
T |
17757140 |
gctgccgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgggaag |
17757084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 15119891 - 15119787
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| || || ||||||| |||||||||||| |||||| | ||||||||| |||||| |||||||| ||||| ||||||| |||||| |
|
|
T |
15119891 |
agattctaccttggggattg--ttgagtcccctatttatagaggtggagagttgcagagccagtgtaatggcacacctggctctggcggttacaaaatcg |
15119794 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
15119793 |
tgggaag |
15119787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 24438760 - 24438628
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | |||| |||||||| |||||| |||||| |||||||||||| || |||| ||||||| ||||||||| | |
|
|
T |
24438760 |
agagagtgagggttt-agaggaagagatagattataccttgg-gactgctgtgagtcccctatttatagaggtagaggattgcagagtcgttgtaatgac |
24438663 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||| ||||||||||||||||||||| |
|
|
T |
24438662 |
acacctggctcttgcggttacgaaatcgtgggaag |
24438628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 18728948 - 18729054
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||| | ||||||| | |||||| ||||| ||| ||| |||||| |
|
|
T |
18728948 |
agattctaccttgaggactgttatgagtcccctatttatagaggtggagggctgcagagacattgtaatggaacacctggctctggcgggtacaaaatcg |
18729047 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
18729048 |
tgggaag |
18729054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 15319150 - 15319045
Alignment:
Q |
39 |
gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgt |
138 |
Q |
|
|
||||||||||||| |||||| |||| ||||| |||||| |||||||||||||||| |||||| || | |||||| |||| ||||||||||||||| |
|
|
T |
15319150 |
gattctaccttggggactgctaagagttccctatatatagaggtggagggctgcagagtcgttgtgatggtacacctaggtctggcggttacgaaatcgt |
15319051 |
T |
|
Q |
139 |
gggaag |
144 |
Q |
|
|
|||||| |
|
|
T |
15319050 |
gggaag |
15319045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 23524128 - 23524193
Alignment:
Q |
75 |
atagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
||||| |||||||||||||||||| ||||||| |||||||| ||||| |||||| |||||||||| |
|
|
T |
23524128 |
atagacgtggagggctgcagagccattgtaatggcacacctggctctggcggttaagaaatcgtgg |
23524193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 3876375 - 3876451
Alignment:
Q |
68 |
cctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||| ||||||||||||||||||||||| | ||||||| | |||| ||||||||||||||| ||||| |
|
|
T |
3876375 |
cctatatatagaggtggagggctgcagagccgttgtgaagacacacctaagtctggcggttacgaaatcgtaggaag |
3876451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 36712849 - 36712720
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
36712849 |
cagagagtgagggtttgagaggaagaaagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
36712750 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
||||| |||||||||||||||||||||||| |
|
|
T |
36712749 |
cacctaactctgacggttacgaaatcgtgg |
36712720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 5590897 - 5590764
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||| |||||||||||||||| ||| |
|
|
T |
5590897 |
cagagagtaagggtttgagaggaagaaagattctaccttggggactgcattgaatcccctatttatagaggtggagggcagcagagccgttgtaatggca |
5590798 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
5590797 |
caccttactctgacggttacgaaattgtgggaag |
5590764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 23495348 - 23495481
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||| ||||| ||||||||| ||||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
23495348 |
cagagagtgaaggttttagaggaagagagattctacattggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
23495447 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
23495448 |
cacctaactctgacggttacgaaatcgtgggaag |
23495481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 20899796 - 20899663
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||||||| | ||||||||||||||| ||||||||| ||| |
|
|
T |
20899796 |
cagagagtgagggttttagaggaagaaagattcaaccttggggactgcattgagtcccctatttataaaggtggagggctgcagattcgttgtaatggca |
20899697 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
20899696 |
cacctaactctgacggttacgaaatcgtgggaag |
20899663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 33622686 - 33622557
Alignment:
Q |
18 |
tgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacacctta |
117 |
Q |
|
|
||||||||||||||||||||| |||||| ||| | |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
T |
33622686 |
tgagggtttgagaggaagaaatattctatcttagggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaattacacacctta |
33622587 |
T |
|
Q |
118 |
ctctgac---ggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| |||||||||||| ||||||| |
|
|
T |
33622586 |
ctctgacggtggttacgaaatcctgggaag |
33622557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 28068224 - 28068090
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaaga--ttctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| ||| ||||||||| | |||||| |||||| |||||||||||| |||||||||||||||||||||||||| | |
|
|
T |
28068224 |
cagagagtgagggttt-agaggaagagagagattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatgg |
28068126 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| ||||||||||||||||||||| |
|
|
T |
28068125 |
cacacctggctctggcggttacgaaatcgtgggaag |
28068090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 38608266 - 38608400
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa-gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
|||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||| |||||||||||| ||||||| || |||||||||||| || |
|
|
T |
38608266 |
cagagagtgagggttttagagggagaaaagattctaccttagggactgcattgagtcccctatttatagaggtggaggtctacagagccgttgtggaggc |
38608365 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| ||||||||||||||||||||| |
|
|
T |
38608366 |
acacctggctctggcggttacgaaatcgtgggaag |
38608400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 42792481 - 42792614
Alignment:
Q |
12 |
agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||| ||||||||| |||||| ||| |||||||||||||| || || |||||| |||| ||||||| ||||||||||||||||| |||||| | ||| |
|
|
T |
42792481 |
agagaatgagggtttagagagggagatagattctaccttggggattgttatgagtcccctagttatagaggtggagggctgcagagcagttgtagtggca |
42792580 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| ||||||||||||||||||||| |
|
|
T |
42792581 |
cacctggctctggcggttacgaaatcgtgggaag |
42792614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 15620364 - 15620258
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| |||||| |||||| |||||||||||| ||| ||||||| ||||| |||||||| |||||| | |||||||||||||||||| | |
|
|
T |
15620364 |
agattctaccttggggactgctatgagtcccctatttatagaggtgaagggctgtagagctgttgtaatggcacacttggctctgacggttacgaaattg |
15620265 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
15620264 |
tgggaag |
15620258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 5931190 - 5931323
Alignment:
Q |
12 |
agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||| ||| | ||| |||||||| ||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||| || |
|
|
T |
5931190 |
agagagtgagggtttagagggagagatagattctatcttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatgaca |
5931289 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||| |||||| |||||||||||||| |
|
|
T |
5931290 |
cacctggttctggcggttatgaaatcgtgggaag |
5931323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 22922839 - 22922705
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||||||| || || |||||| |||||||||||| |||||||||| ||||||||||||| | |
|
|
T |
22922839 |
cagagagtgagggttt-agaggaagagatagattctaccttggggattgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtga |
22922741 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| |||| ||||||||||||||||||||| |
|
|
T |
22922740 |
cacacctggctctagcggttacgaaatcgtgggaag |
22922705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 41037855 - 41037712
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagat--tctaccttggtgactgcattgagtctcctatttatagaa---------gtggagggctgcagagccg |
99 |
Q |
|
|
|||||||||||||||| ||||||||| | || |||||||||| |||||| |||||| ||||||||||||| |||||||||||| |||||| |
|
|
T |
41037855 |
cagagagtgagggttt-agaggaagagatatattctaccttggggactgctatgagtcccctatttatagaatttatagaggtggagggctgcggagccg |
41037757 |
T |
|
Q |
100 |
ttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
T |
41037756 |
ttgtaatggcacacctggctctggcggttacgaaatcgtgggaag |
41037712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 22922242 - 22922108
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||||||| |||| |||||| |||||||||||| |||||||||| ||||||||||||| | |
|
|
T |
22922242 |
cagagagtgagggttt-agaggaagagatagattctaccttgggaactgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtga |
22922144 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| |||||| ||||||||||||| |
|
|
T |
22922143 |
cacacctggctctggtggttacaaaatcgtgggaag |
22922108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 31307237 - 31307306
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttat |
224 |
Q |
|
|
|||||||||||| ||||||||| || |||||| ||||||||||| |||||| |||||||||||||||| |
|
|
T |
31307237 |
aaataataatcaacatatataaatataagcataaataaaatataggtaaaagaaagaacaataaacttat |
31307306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 19330052 - 19329991
Alignment:
Q |
83 |
ggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||| ||||||| ||||||| ||||||| ||||| ||||||||||||||||||||| |
|
|
T |
19330052 |
ggagggctacagagccattgtaatggcacaccaagctctggcggttacgaaatcgtgggaag |
19329991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 17282690 - 17282557
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
17282690 |
cagagagtgagggtttgagaggaggaaaggttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
17282591 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||||||||| |||||||||| |
|
|
T |
17282590 |
caccttactctgacggttacgaattcgtgggaag |
17282557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 25239694 - 25239827
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
25239694 |
cagagagtgagggtttgagagaaagaaagattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
25239793 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |
|
|
T |
25239794 |
caccttactctgacggttacgaaattgtgggaag |
25239827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 13861313 - 13861446
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||| |
|
|
T |
13861313 |
cagagagtgagggtttgagaagaagaaagattctaccttggggactgcattgagttccctatttatagaggtggagggctgcaaagccgttgtaatggca |
13861412 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||| || ||||||||||||||||||| |
|
|
T |
13861413 |
caccttactctaacagttacgaaatcgtgggaag |
13861446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 3270546 - 3270679
Alignment:
Q |
12 |
agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||| ||| | ||| |||| ||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
3270546 |
agagagtgagggtttagagggagagatagatcctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
3270645 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| |||||||||||||||||||| |
|
|
T |
3270646 |
cacctggctctggtggttacgaaatcgtgggaag |
3270679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 10985912 - 10985780
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
|||||||||||||||| |||||||| |||||||||||||| |||||| |||||| |||||||||||| ||||| |||||||||||||||||||| || |
|
|
T |
10985912 |
agagagtgagggtttg-gaggaagaggtagattctaccttgg-gactgccgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggc |
10985815 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||| ||||||||||||||||||||| |
|
|
T |
10985814 |
acacctggctctcgcggttacgaaatcgtgggaag |
10985780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 6671232 - 6671309
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgtggtg |
232 |
Q |
|
|
|||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
T |
6671232 |
aaatcataatcatcatatataaatagaagcatcaataaaatatagctaaaagagagaacaataaacttatctgtggtg |
6671309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 21332743 - 21332611
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcac |
111 |
Q |
|
|
|||||||||||||||||| ||| |||||||||||||| ||||| ||||||| |||||||| ||| |||||||||||||||||||||||| | |||| |
|
|
T |
21332743 |
agagagtgagggtttgaggaagagatagattctaccttggaaactgctttgagtcccctatttacagaggtggagggctgcagagccgttgtagtggcac |
21332644 |
T |
|
Q |
112 |
accttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||| ||||| || |||||||||| ||||||| |
|
|
T |
21332643 |
acctggctctggcgcttacgaaatcatgggaag |
21332611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 12885280 - 12885413
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
|||| |||||||||| ||||||||| | ||||||||||||| ||||| |||||| |||||||||| | |||||||||||||||||| ||||||| || |
|
|
T |
12885280 |
agagggtgagggttt-agaggaagagatagattctaccttggggactgttgtgagtcccctatttataaaggtggagggctgcagagccattgtaatggc |
12885378 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| ||||||||||||||||||||| |
|
|
T |
12885379 |
acacctggctctggcggttacgaaatcgtgggaag |
12885413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 3268334 - 3268467
Alignment:
Q |
12 |
agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||| ||| | ||| |||||||||||||| |||| | |||||| |||||||||||| |||||||||||||||||| ||||||| || |
|
|
T |
3268334 |
agagagtgagggtttagagggagagatagattctaccttggagacttccgtgagtcccctatttatagaggtggagggctgcagagccattgtaatgaca |
3268433 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| |||||||| |||||||||||| |
|
|
T |
3268434 |
cacctggctctggcggttacgtaatcgtgggaag |
3268467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 6667560 - 6667637
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgtggtg |
232 |
Q |
|
|
|||| |||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| |
|
|
T |
6667560 |
aaatcataatcatcaaatataaatagaagcatcaataaaatatagctaaaagagagaacaataaacttatatgtggtg |
6667637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 9901871 - 9901770
Alignment:
Q |
41 |
ttctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
|||||||||| |||||| ||||| ||||| |||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
T |
9901871 |
ttctaccttgaggactgctaagagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacacctggctctgacggttacgaaatcgtgg |
9901772 |
T |
|
Q |
141 |
ga |
142 |
Q |
|
|
|| |
|
|
T |
9901771 |
ga |
9901770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 49402721 - 49402821
Alignment:
Q |
40 |
attctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg |
139 |
Q |
|
|
||||||| |||| |||||| |||||| ||||| |||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||| |||||| |
|
|
T |
49402721 |
attctactttggggactgctatgagtcccctatatatagaggtggagggctgcagagccgttgtaatggcacaccaggctctggcggttacgagatcgtg |
49402820 |
T |
|
Q |
140 |
g |
140 |
Q |
|
|
| |
|
|
T |
49402821 |
g |
49402821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 18284725 - 18284661
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttat |
76 |
Q |
|
|
|||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||| |
|
|
T |
18284725 |
cagagagtgagggttt-agaggaagagagattctaccttggggactgcattgagtcccctatttat |
18284661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 12217588 - 12217655
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaa |
105 |
Q |
|
|
|||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
T |
12217588 |
agattctaccttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaa |
12217655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 10422046 - 10422106
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctccta |
71 |
Q |
|
|
|||||||||||||||| |||||||||| |||||||||||| |||||||||||||| |||| |
|
|
T |
10422046 |
cagagagtgagggtttttgaggaagaaatattctaccttggggactgcattgagtccccta |
10422106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 26780988 - 26780882
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| ||||| ||| || ||||| | ||| |||||||||||||||||||||||||| |||||| |||||| |||||||||| || |
|
|
T |
26780988 |
agattctaccttggggactgttatgactcccctatacagagaggtggagggctgcagagccgttgtaatgacacaccagactctggtggttacgaaaacg |
26780889 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
26780888 |
tgggaag |
26780882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 895731 - 895676
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggaga |
211 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||| |
|
|
T |
895731 |
aaataataatcatcatatataattagaagcatcaataaaa-atagctaaaagagaga |
895676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 28891910 - 28892009
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaa-agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||| || |||||||||| |||||||||||||| |||| ||||| ||||| |||||| |||||| |||||| |||||||||||| ||| |
|
|
T |
28891910 |
agagagtgaggttt--agaggaagaatagattctaccttggggactcttaagagtcccctatatatagaggtggagagctgcatagccgttgtaatggca |
28892007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 34845578 - 34845524
Alignment:
Q |
90 |
tgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||||||| |||||| | |||||||||||||||||||||||||| |
|
|
T |
34845578 |
tgcagagtcgttgtaatggcacacatgtgtctgacggttacgaaatcgtgggaag |
34845524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 45313209 - 45313279
Alignment:
Q |
74 |
tatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| || ||||| |||| | |||||||||| ||||||| ||||| ||||||||||||||||||||| |
|
|
T |
45313209 |
tatagaggtagagggttgcaaatccgttgtaatggcacaccaggctctggcggttacgaaatcgtgggaag |
45313279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 16396389 - 16396333
Alignment:
Q |
88 |
gctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||| | |||||||| |||||| || ||| |||||| ||||||| |
|
|
T |
16396389 |
gctgcagagccgttgtagtggcacacctgactctggcgattaggaaatcatgggaag |
16396333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 102; Significance: 9e-51; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 25820716 - 25820849
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||| |||||||||||| ||| |
|
|
T |
25820716 |
cagagagtaagggtttgagaggaagaaagattctaccatggggactgcattgagtcccctatttttagaggtggagggctgcaaagccgttgtaatggca |
25820815 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |
|
|
T |
25820816 |
caccttactctgacggttacgaaatcgtgggaag |
25820849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 2085942 - 2085809
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| |||||||||| || |
|
|
T |
2085942 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagaaccgttgtaatggc |
2085844 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| ||||||||||||||||||||| |
|
|
T |
2085843 |
acacctggctctggcggttacgaaatcgtgggaag |
2085809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 1788650 - 1788732
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgca |
93 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
1788650 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgca |
1788732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 18040680 - 18040548
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||| ||||| ||||||||| | ||||||||||||| |||||| ||||||| |||||||||||| |||||| ||||||||||||||||||| || |
|
|
T |
18040680 |
agagagtgaaggttt-agaggaagagattgattctaccttggggactgc-ttgagtcccctatttatagaggtggagagctgcagagccgttgtaatggc |
18040583 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||||||||||||||||||||||||| |
|
|
T |
18040582 |
acacctggctctgacggttacgaaatcgtgggaag |
18040548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 1788743 - 1788817
Alignment:
Q |
158 |
taataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgtggtg |
232 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
1788743 |
taataatcatcatatataaatagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgtggtg |
1788817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 10532960 - 10532860
Alignment:
Q |
40 |
attctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg |
139 |
Q |
|
|
|||||||||||| |||| |||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |
|
|
T |
10532960 |
attctaccttggggactccattaagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctgactctggcggttacgaaatcgtg |
10532861 |
T |
|
Q |
140 |
g |
140 |
Q |
|
|
| |
|
|
T |
10532860 |
g |
10532860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 32009213 - 32009080
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | |||| |||||||| || | | ||||||| |||||||||||| ||||||||||| |||||||||||||| || |
|
|
T |
32009213 |
agagagtgagggttt-agaggaagagatagattttaccttggggagtactttgagtcccctatttatagaggtggagggctgtagagccgttgtaatggc |
32009115 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||||| ||||||||||||||||||||| |
|
|
T |
32009114 |
acacctgactctggcggttacgaaatcgtgggaag |
32009080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 7454867 - 7454733
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| | ||||||| | ||||||| ||||| |||||| |||||| |||||||||||| ||||| |||||||||||||||||||| | |
|
|
T |
7454867 |
cagagagtgagggttt-acaggaagagatagattctaacttggggactgctatgagtcccctatttatagaggtggaaggctgcagagccgttgtaatgg |
7454769 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| ||||||||||||||||||||| |
|
|
T |
7454768 |
cacacctggctctggcggttacgaaatcgtgggaag |
7454733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 18574181 - 18574084
Alignment:
Q |
47 |
cttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| || ||| ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
T |
18574181 |
cttggggaatgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaag |
18574084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 41280982 - 41280876
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| ||||| |||||| |||||||||||| ||||||| |||||||||||||||||| |||||||| |||||| |||||| |||||| |
|
|
T |
41280982 |
agattctaccttggggactgttatgagtcccctatttatagaggtggaggactgcagagccgttgtaatggcacacctgactctgggggttacaaaatcg |
41280883 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
41280882 |
tgggaag |
41280876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 7999649 - 7999781
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||||||| |||||||| ||||||| |||| |||||||||||| |
|
|
T |
7999649 |
cagagagtgagggttt-agaggaagagatagattctaccttggggactgccgtgagtctcctgtttatagaggtggaggactgc--agccgttgtaatga |
7999745 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| ||||||||||||||||||||| |
|
|
T |
7999746 |
cacacctggctctggcggttacgaaatcgtgggaag |
7999781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 24060557 - 24060691
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaag--aaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||| ||||||||||| |||||||| | |||||||||||||| |||||| ||||| | ||| |||||| ||||||||||||||||||||||| || | |
|
|
T |
24060557 |
cagatagtgagggttt-agaggaagcgatagattctaccttggagactgctaagagtcccttatatatagaggtggagggctgcagagccgttgtgatgg |
24060655 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| ||||||| ||||||| ||||| |
|
|
T |
24060656 |
cacaccaggctctggcggttacaaaatcgtaggaag |
24060691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 33273704 - 33273604
Alignment:
Q |
14 |
agagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcaca |
112 |
Q |
|
|
||||||||||||| |||| ||| |||||||||||||| |||| | |||||| |||||||||||| |||||||| ||||||||||||||||| ||||| |
|
|
T |
33273704 |
agagtgagggtttagagaaagagatagattctaccttggggactcctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcaca |
33273605 |
T |
|
Q |
113 |
c |
113 |
Q |
|
|
| |
|
|
T |
33273604 |
c |
33273604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 11709419 - 11709501
Alignment:
Q |
62 |
gagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| |||||| |||||||| ||||||||||||||||| ||||||| ||||| | |||||||||||||||||| |
|
|
T |
11709419 |
gagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacaccaggctctggcatttacgaaatcgtgggaag |
11709501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 24033762 - 24033894
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaa---gtggagggctgcagagccgttgtaat |
106 |
Q |
|
|
||||||||| ||||| ||||||||| | |||||||| |||| |||||| |||||| |||| ||||| | |||||||| ||||||||||||||||| |
|
|
T |
24033762 |
agagagtgaaggttt-agaggaagagatagattctacattggggactgctatgagtcccctagttataatataggtggagggttgcagagccgttgtaat |
24033860 |
T |
|
Q |
107 |
agcacaccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
|||||| | ||| || ||||||||||||||||| |
|
|
T |
24033861 |
ggcacacttgactttggcggttacgaaatcgtgg |
24033894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 24974086 - 24973953
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||| |
|
|
T |
24974086 |
cagagagtgagggttttagaggaagagagattctaccttggtgactgcattgagtcccctatttatagagttagagggctgcagagccgttgtaatggca |
24973987 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
24973986 |
cacctaactctgacggttacgaaatcgtgggaag |
24973953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 21817938 - 21817805
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| ||| |||||||||||||||| ||| |
|
|
T |
21817938 |
cagagagtgagggttttagaggaagaaagattctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatggca |
21817839 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
21817838 |
cacctaactctgacggttacgaaatcgtgggaag |
21817805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 22186186 - 22186053
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||| ||||| |||||||||||||||||||| ||| |
|
|
T |
22186186 |
cagagagtgagggtttgagaggaagaaagattctaccttggggactgctttaagtcccctatttatagaggtggatggctgcagagccgttgtaatggca |
22186087 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||| ||||||||| ||||||||||||| |
|
|
T |
22186086 |
caccttactcggacggttacaaaatcgtgggaag |
22186053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 21815723 - 21815619
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||| |||||||| ||| |
|
|
T |
21815723 |
cagagagtaagggttttagaggaagaaagattctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatggca |
21815624 |
T |
|
Q |
111 |
cacct |
115 |
Q |
|
|
||||| |
|
|
T |
21815623 |
cacct |
21815619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 8990962 - 8990828
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| |||||||||| ||| ||||||| |||||| |||||||| ||| ||||||||||| |||||||||||||| | |
|
|
T |
8990962 |
cagagagtgagggttt-agaggaagagttagattctaccgtggggactgcagtgagtcccctatttacagaggtggagggctgtagagccgttgtaatgg |
8990864 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| |||| ||||||||||||||||||||| |
|
|
T |
8990863 |
cacacctggctctagcggttacgaaatcgtgggaag |
8990828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 19442310 - 19442177
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| |||||| |||||| |||||||||||| | |
|
|
T |
19442310 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcaaagccgttgtaatgac |
19442212 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||| || |||||| |||||||||||||| |||||| |
|
|
T |
19442211 |
acatctgactctggcggttacgaaatcgggggaag |
19442177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 19967618 - 19967488
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||| | |||||| ||||||| |||||||||||| |||||||| |||| | |||||||||| | |
|
|
T |
19967618 |
agagagtgagggttt-agaggaagagatggattctaccttagggactgctttgagtcccctatttatagaggtggagggttgcataaccgttgtaatgac |
19967520 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtggg |
141 |
Q |
|
|
|||||| ||||| |||||||||||||||||| |
|
|
T |
19967519 |
acacctggctctggcggttacgaaatcgtggg |
19967488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 8995610 - 8995505
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| || |||| |||||| |||||||||||| |||||||||||||||||||||| | | ||||||| |||| |||||||||||||| |
|
|
T |
8995610 |
agattctaccttggggaatgcagtgagtcccctatttatagaggtggagggctgcagagccgttg-attgacacacctagctctagcggttacgaaatcg |
8995512 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
8995511 |
tgggaag |
8995505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 9858996 - 9859104
Alignment:
Q |
40 |
attctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacac---ctt-actctgacggttacgaaat |
135 |
Q |
|
|
|||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||| | |||||| ||| |||||||||||||||||| |
|
|
T |
9858996 |
attctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtggttgcacacacacttggctctgacggttacgaaat |
9859095 |
T |
|
Q |
136 |
cgtgggaag |
144 |
Q |
|
|
||||||||| |
|
|
T |
9859096 |
cgtgggaag |
9859104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 38621830 - 38621932
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| ||||||| |||||| | ||| |||||| |||||||||||||||||||||||||| ||||| | ||||| ||||||||||||| |
|
|
T |
38621830 |
agattctaccttggggactgcagtgagtcccttatatatagaggtggagggctgcagagccgttgtaatggcacatttggctctggtggttacgaaatcg |
38621929 |
T |
|
Q |
138 |
tgg |
140 |
Q |
|
|
||| |
|
|
T |
38621930 |
tgg |
38621932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 38825316 - 38825390
Alignment:
Q |
154 |
taaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgt |
228 |
Q |
|
|
||||||||||||| ||||||||| || |||||||||||||| ||| |||||| |||||||||||| |||||||| |
|
|
T |
38825316 |
taaataataatcaacatatataaatataagcatcaataaaacataggtaaaagagagaacaataaatttatctgt |
38825390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 38828530 - 38828600
Alignment:
Q |
156 |
aataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgt |
228 |
Q |
|
|
||||||||||| | ||||||| || |||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
T |
38828530 |
aataataatcaacttatataaatataagcatcaataaaatataggtaaaa--gagaacaataaacttatctgt |
38828600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 170769 - 170684
Alignment:
Q |
20 |
agggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaa |
105 |
Q |
|
|
|||||||||||| || |||||||||||||| | |||| |||| |||||||||||||| ||||| | |||||||||||||||| |
|
|
T |
170769 |
agggtttgagagtgtgagagattctaccttggaggctgcgatgagcctcctatttatagaggtggatgaatgcagagccgttgtaa |
170684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 49873030 - 49873103
Alignment:
Q |
154 |
taaataataatcatcatatataactagaagcatcaataaaatatatct-aaaagggagaacaataaacttatct |
226 |
Q |
|
|
||||||||||||| |||||||| || ||| |||||||||||||| | ||||| |||| |||||||||||||| |
|
|
T |
49873030 |
taaataataatcaaaatatataaataaaagaatcaataaaatataaatgaaaagagagatcaataaacttatct |
49873103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0265
Description:
Target: scaffold0265; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 14871 - 15004
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| ||| |||||||||||||||| ||| |
|
|
T |
14871 |
cagagagtgagggttttagaggaagaaagattctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatggca |
14970 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
14971 |
cacctaactctgacggttacgaaatcgtgggaag |
15004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 17086 - 17190
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||| |||||||| ||| |
|
|
T |
17086 |
cagagagtaagggttttagaggaagaaagattctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatggca |
17185 |
T |
|
Q |
111 |
cacct |
115 |
Q |
|
|
||||| |
|
|
T |
17186 |
cacct |
17190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 7549 - 7417
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||| |
|
|
T |
7549 |
cagagggtgagggtttgagaggaagaaagattctaccttggggattgcattgagtcccctatttatagaggtggagggctgcaaagccgttgtaatggca |
7450 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||||| ||||||||||||| ||||| |
|
|
T |
7449 |
caccttactctgac-gttacgaaatcgttggaag |
7417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 11072 - 10939
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||| ||||||||| ||||||||||||||||| |||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||| ||| |
|
|
T |
11072 |
cagagaatgagggttttagaggaagaaagattctcccttggggactccattgagtccactatttataaaggtggagggctgtagagccgttgtaatggca |
10973 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||||||||||| ||||||| |
|
|
T |
10972 |
cacctaactctgacggttacgaaatcatgggaag |
10939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 41266396 - 41266262
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||| || |
|
|
T |
41266396 |
agagagtgagggttttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggc |
41266297 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| ||||||||| |||||| |||| |
|
|
T |
41266296 |
acacctggctctggcggttacgatatcgtgagaag |
41266262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 27347170 - 27347302
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||| ||||| |||||||| |||||||||||||| ||||||||||| || ||||| |||||| |||||||||| || |||||||||||| ||| |
|
|
T |
27347170 |
cagagagtgatggtttt-gaggaagagagattctaccttggggactgcattgaatcccctatgtatagacgtggagggctacaaagccgttgtaatggca |
27347268 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| || ||||||||||||||||| ||||||| |
|
|
T |
27347269 |
cacctaacactgacggttacgaaatcatgggaag |
27347302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 42534295 - 42534189
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||||||||||| |
|
|
T |
42534295 |
agattctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacatctggctctggcggttacgaaatcg |
42534196 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
42534195 |
tgggaag |
42534189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 23929796 - 23929930
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| ||||| |||||||| ||||||| |||||| ||||| || ||| |||||||||||||||||||||||||| | |
|
|
T |
23929796 |
cagagagtgagggttt-agaggaagagttagattttaccttggggactgcagtgagtcccctatataaagaggtggagggctgcagagccgttgtaatgg |
23929894 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| |||||||| |||||||||||| |
|
|
T |
23929895 |
cacacctggctctggcggttacggaatcgtgggaag |
23929930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 23756018 - 23755885
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| ||||| |||||| |||||||||||| ||||| ||||| |||||||||||||| || |
|
|
T |
23756018 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgttgtgagtcccctatttatagaggtggaaggctgtagagccgttgtaatggc |
23755920 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| |||| ||||||||||||||||||||| |
|
|
T |
23755919 |
acacctggctctagcggttacgaaatcgtgggaag |
23755885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 140
Target Start/End: Complemental strand, 25134106 - 25134004
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||| | |||||| |||||| |||||||||||| |||||||||||||||||||||||| | |||||||| ||||| |||||||||||||| |
|
|
T |
25134106 |
agattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtagtggcacacctggctctggcggttacgaaatcg |
25134007 |
T |
|
Q |
138 |
tgg |
140 |
Q |
|
|
||| |
|
|
T |
25134006 |
tgg |
25134004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 3770260 - 3770389
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| | ||||||| | ||||||||||||| ||||| ||| || |||||||||||| |||||||||||||||||||||||||| || |
|
|
T |
3770260 |
agagagtgagggtttaa-aggaagagatagattctaccttggggactgttgtgaatcccctatttatagaggtggagggctgcagagccgttgtaatggc |
3770358 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgg |
140 |
Q |
|
|
|||||| ||||| ||||||| ||||||||| |
|
|
T |
3770359 |
acacctggctctggcggttacaaaatcgtgg |
3770389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 1043631 - 1043560
Alignment:
Q |
159 |
aataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatctgtgg |
230 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||||| ||| ||| || |||||||||||||||||||| |
|
|
T |
1043631 |
aataatcatcatatataaatagaagcatcaataaaatatagctataagagaaaacaataaacttatctgtgg |
1043560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 29568315 - 29568448
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||| ||||| | ||| |||||| || ||||||||| |||||||||| ||||||||||||||| | |
|
|
T |
29568315 |
agagagtgagggttt-agaggaagacatagattctaacttggcggttgctatgagtccccaatttatagaggtggagggctacagagccgttgtaatggt |
29568413 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| ||||||||||||||||||||| |
|
|
T |
29568414 |
acacctggctctggcggttacgaaatcgtgggaag |
29568448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 3105203 - 3105337
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||| ||| ||||||||| |||||||||||||| |||||| |||||| | |||||||||| ||||||| || |||||||||||||| |
|
|
T |
3105203 |
cagagagtgaggtttt-agaggaagagttagattctaccttggggactgctatgagtcccatatttatagaggtggaggattgtagagccgttgtaatga |
3105301 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| | ||||| |||||||||||||| |
|
|
T |
3105302 |
cacacctaactctcatggttatgaaatcgtgggaag |
3105337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 26155131 - 26155049
Alignment:
Q |
62 |
gagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| |||||||||||| ||||||||||||| ||||||| |||| |||||||| || || |||||||||||||||||||| |
|
|
T |
26155131 |
gagtcccctatttatagaggtggagggctgcatagccgttataatggcacacctggctatggtggttacgaaatcgtgggaag |
26155049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 19092753 - 19092854
Alignment:
Q |
43 |
ctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtggga |
142 |
Q |
|
|
||||||||| |||||| |||||| ||||| |||||| |||| ||||||||||||||||||||| |||||| ||||| ||||| |||| | |||||| |
|
|
T |
19092753 |
ctaccttggggactgctatgagtcccctatatatagaggtggggggctgcagagccgttgtaatgacacaccagactctcgcggtttcgaacttgtggga |
19092852 |
T |
|
Q |
143 |
ag |
144 |
Q |
|
|
|| |
|
|
T |
19092853 |
ag |
19092854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 26159233 - 26159154
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggct |
90 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| ||||| ||||||| |||||||||||| |||||||||| |
|
|
T |
26159233 |
agagagtgagggttt-agaggaagagatagattctaccttgggaactgctttgagtcccctatttatagaggtggagggct |
26159154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 54770 - 54670
Alignment:
Q |
44 |
taccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaa |
143 |
Q |
|
|
|||||| | |||||||||||||| |||||||||||| ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||| |||||| |
|
|
T |
54770 |
tacctttgggactgcattgagtcccctatttatagaggtggagggctgcatagccgttgtaatggtacaccttactctgacggttacgaaatcatgggaa |
54671 |
T |
|
Q |
144 |
g |
144 |
Q |
|
|
| |
|
|
T |
54670 |
g |
54670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 47615 - 47482
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||| || |
|
|
T |
47615 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggc |
47517 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||| | ||||| ||||||| |||| |||||||| |
|
|
T |
47516 |
acacttggctctggcggttacaaaattgtgggaag |
47482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 391458 - 391592
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| |||||||| ||||||||||||||||| | |
|
|
T |
391458 |
cagagagtgagggttt-agaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatgg |
391556 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| |||||||||||| ||||||| |
|
|
T |
391557 |
cacacctggctctggcggttacgaaattatgggaag |
391592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 380763 - 380894
Alignment:
Q |
13 |
gagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||| ||||||||| | |||| |||| ||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||| |
|
|
T |
380763 |
gagagtgagggttt-agaggaagagatagatt-taccatggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca |
380860 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| ||||||||||| ||| |||| |
|
|
T |
380861 |
cacctggctctggaggttacgaaattgtgagaag |
380894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 16853183 - 16853075
Alignment:
Q |
36 |
aaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaat |
135 |
Q |
|
|
||||||||| |||||| |||||||||||||| |||||||||||| ||||||||||||| | |||||||| |||||||| ||||| |||||||||||| |
|
|
T |
16853183 |
aaagattctcccttggggactgcattgagtcccctatttatagaggtggagggctgcaaatatgttgtaatggcacacctggctctggcggttacgaaat |
16853084 |
T |
|
Q |
136 |
cgtgggaag |
144 |
Q |
|
|
||||||||| |
|
|
T |
16853083 |
cgtgggaag |
16853075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 19790346 - 19790408
Alignment:
Q |
82 |
tggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
T |
19790346 |
tggagggctgcagagccgttgtaatggcacacctgactctgacggttacgaaatcgtgggaag |
19790408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 22915051 - 22915185
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||| | |||||| ||||||||||||||||||| | |
|
|
T |
22915051 |
cagagagtgagggttt-agaggaagagatagattctaccttggggactgctatgagtcccctatttataaaggtggagagctgcagagccgttgtaatgg |
22915149 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||| | ||| | |||||| |||||||||||||| |
|
|
T |
22915150 |
tacacttggctccggcggttatgaaatcgtgggaag |
22915185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 19773385 - 19773462
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggag |
86 |
Q |
|
|
|||||||||||||||| ||||||| | ||||||||||||| |||||| ||||||||||||||||||| |||||| |
|
|
T |
19773385 |
cagagagtgagggtttagaaggaagagatagattctaccttggggactgctgtgagtctcctatttatagaggtggag |
19773462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 1998006 - 1998087
Alignment:
Q |
12 |
agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgc |
92 |
Q |
|
|
||||||||||||||| |||| ||| |||||||||||||| |||||| |||||| |||||||||||| |||||| ||||| |
|
|
T |
1998006 |
agagagtgagggtttagagacagagacagattctaccttggggactgctttgagtaccctatttatagaggtggagagctgc |
1998087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 16914764 - 16914837
Alignment:
Q |
69 |
ctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtggga |
142 |
Q |
|
|
|||| |||||| |||||||||||||||||| ||||||| ||||| | |||| ||||||||||||||||||| |
|
|
T |
16914764 |
ctatatatagaggtggagggctgcagagccattgtaatggcacagatcggtctggcggttacgaaatcgtggga |
16914837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 22006518 - 22006587
Alignment:
Q |
37 |
aagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaat |
106 |
Q |
|
|
||||||||||||||| |||||| ||||| | ||| |||||| |||||||||||||||| ||||||||| |
|
|
T |
22006518 |
aagattctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaat |
22006587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 22014035 - 22014104
Alignment:
Q |
37 |
aagattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaat |
106 |
Q |
|
|
||||||||||||||| |||||| ||||| | ||| |||||| |||||||||||||||| ||||||||| |
|
|
T |
22014035 |
aagattctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaat |
22014104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 44635823 - 44635880
Alignment:
Q |
87 |
ggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||||||||||||||||| |||||| | | || | ||||||||||||||||||||| |
|
|
T |
44635823 |
ggctgcagagccgttgtaatggcacacgtgagtccgtcggttacgaaatcgtgggaag |
44635880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0042 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0042
Description:
Target: scaffold0042; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 68700 - 68806
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| |||||||||||| |||||||| || || |||||||||||||| |
|
|
T |
68700 |
agattctaccttgggcactgcggtgagtcccctatttatagaggtggagggctgcaaagccgttgtaatgacacaccttgctttggcggttacgaaatcg |
68799 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
68800 |
tgggaag |
68806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0042; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 74872 - 74978
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||||| || ||| |||||| |||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| | |||| ||||||| |
|
|
T |
74872 |
agattctaccttggggaatgcggtgagtcccctatttatagaggtggagggctgtagagccgttgtaatggcacacctggctctggcagttatgaaatcg |
74971 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
| ||||| |
|
|
T |
74972 |
tcggaag |
74978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 4397 - 4265
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | |||||| ||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||| | | |
|
|
T |
4397 |
cagagagtgagggttt-agaggaagagatagattctctcttggggactgatgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtgg |
4299 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtggga |
142 |
Q |
|
|
||||||| ||||| |||||||||||||||||| |
|
|
T |
4298 |
cacacctggctctggtggttacgaaatcgtggga |
4265 |
T |
|
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Target: scaffold0058 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 1609 - 1741
Alignment:
Q |
13 |
gagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagca |
110 |
Q |
|
|
|||||||||||||| ||||||||| | |||||||| |||| ||||| |||||| |||||||||||| ||||| |||||||||||||||||||| ||| |
|
|
T |
1609 |
gagagtgagggttt-agaggaagagatagattctacattggggactgttgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggca |
1707 |
T |
|
Q |
111 |
caccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|| | ||||| ||||||||||||||||||||| |
|
|
T |
1708 |
tacttggctctggcggttacgaaatcgtgggaag |
1741 |
T |
|
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Target: scaffold0058; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 15364 - 15498
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||||||||| ||||||||| | ||||||||| || ||||| |||||| |||||||||||| |||||||||||||||||||||| ||| | |
|
|
T |
15364 |
cagagagtgagggttt-agaggaagagatagattctaccgcggggactgttatgagtcccctatttatagaggtggagggctgcagagccgttgcaatgg |
15462 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|| ||| |||||| ||||||| ||||||||||||| |
|
|
T |
15463 |
catgcctgactctggcggttactaaatcgtgggaag |
15498 |
T |
|
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Target: scaffold0170 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 16487 - 16382
Alignment:
Q |
40 |
attctaccttggtg-actgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgt |
138 |
Q |
|
|
|||||||||||| | ||||| ||||||| |||||||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||| |
|
|
T |
16487 |
attctaccttgggggactgctttgagtcccctatttatagaggtggagggctgcagagccattgtaatggtacacctggctctggcggttacaaaatcgt |
16388 |
T |
|
Q |
139 |
gggaag |
144 |
Q |
|
|
|||||| |
|
|
T |
16387 |
gggaag |
16382 |
T |
|
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Target: scaffold0008 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 253312 - 253446
Alignment:
Q |
11 |
cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatag |
108 |
Q |
|
|
|||||||||| ||||| ||||||||| |||||||||||||| ||||| | |||||| ||||| |||| | ||||| ||||||| || ||||||||| | |
|
|
T |
253312 |
cagagagtgacggttt-agaggaagagttagattctaccttggggactgtagtgagtcccctatatataaaggtggacggctgcaaagtcgttgtaatgg |
253410 |
T |
|
Q |
109 |
cacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||||| ||||| ||||||||||||||||||||| |
|
|
T |
253411 |
cacacctggctctggcggttacgaaatcgtgggaag |
253446 |
T |
|
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Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 242731 - 242806
Alignment:
Q |
69 |
ctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||| |||||| ||||||||| |||||||||||||||| |||||||| |||| |||||||| |||||||||||| |
|
|
T |
242731 |
ctatatatagaggtggagggcggcagagccgttgtaatggcacacctggctcttgcggttacgtaatcgtgggaag |
242806 |
T |
|
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Target: scaffold0299 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0299
Description:
Target: scaffold0299; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 19150 - 19254
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||| ||| ||||||||| | ||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||||||| |||||| || |
|
|
T |
19150 |
agagagtgaggattt-agaggaagagatagattctaccttggggactgcagtgagtcccctatttatagaggtggagggctgcagagccattgtaacggc |
19248 |
T |
|
Q |
110 |
acacct |
115 |
Q |
|
|
|||||| |
|
|
T |
19249 |
acacct |
19254 |
T |
|
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Target: scaffold0933 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0933
Description:
Target: scaffold0933; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 1038 - 965
Alignment:
Q |
153 |
ttaaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttatct |
226 |
Q |
|
|
|||||||||||||| ||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
T |
1038 |
ttaaataataatcaacatatataaatataagcatcaataaaatataggtaaaagagagaacaataaacttatct |
965 |
T |
|
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Target: scaffold0280 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0280
Description:
Target: scaffold0280; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 1237 - 1107
Alignment:
Q |
15 |
gagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcaca |
112 |
Q |
|
|
|||||||||||| ||||||||| | |||||||| |||| |||||| |||||| |||||||||||| |||||||||| || |||||||||||| | ||| |
|
|
T |
1237 |
gagtgagggttt-agaggaagagatagattctacgttggagactgctgtgagtcccctatttatagaggtggagggctacatagccgttgtaatggaaca |
1139 |
T |
|
Q |
113 |
ccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||| |||| || |||||||||||||||||| |
|
|
T |
1138 |
cctggctctagcgattacgaaatcgtgggaag |
1107 |
T |
|
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Target: scaffold0026 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 151490 - 151357
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| | ||||||| | ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||||||||||| | | |
|
|
T |
151490 |
agagagtgagggtttaa-aggaagagatagattctaccttagggaatgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtgga |
151392 |
T |
|
Q |
110 |
acaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
| |||| |||| ||||||||||||||||||||| |
|
|
T |
151391 |
agacctggctctagcggttacgaaatcgtgggaag |
151357 |
T |
|
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Target: scaffold0989 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0989
Description:
Target: scaffold0989; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 1721 - 1617
Alignment:
Q |
12 |
agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagc |
109 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||| |||||||||||| ||||| ||||| ||||| |||||||| || |
|
|
T |
1721 |
agagagtgagggttt-agaggaagagatagattctaccttggggactgctttgagtgccctatttatagaggtggacggctgtagagctgttgtaatggc |
1623 |
T |
|
Q |
110 |
acacct |
115 |
Q |
|
|
|||||| |
|
|
T |
1622 |
acacct |
1617 |
T |
|
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Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 26149 - 26216
Alignment:
Q |
155 |
aaataataatcatcatatataactagaagcatcaataaaatatatctaaaagggagaacaataaacttat |
224 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| |
|
|
T |
26149 |
aaataataatcatcatatataaatagaagcatcaataaaatatagctaaaa--gagaacaatgaacttat |
26216 |
T |
|
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Target: scaffold0150 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0150
Description:
Target: scaffold0150; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 30230 - 30124
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||| | |||||| |||||| | |||||||||| |||||||||||||||||| |||||| | |||||| ||||| ||||||||||| | |
|
|
T |
30230 |
agattctaccttagggactgctgtgagtcccgtatttatagaggtggagggctgcagagccattgtaacggaacacctggctctggtggttacgaaattg |
30131 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
30130 |
tgggaag |
30124 |
T |
|
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Target: scaffold0111 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0111
Description:
Target: scaffold0111; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 3002 - 2897
Alignment:
Q |
38 |
agattctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg |
137 |
Q |
|
|
|||||||||||| | ||||| |||||| ||||| |||||| |||||| |||||||||| |||||||| ||||||| ||||| |||||||||||||| |
|
|
T |
3002 |
agattctaccttcgggactgttatgagtc-cctatatatagaggtggagagctgcagagctgttgtaatggcacaccaggctctggcggttacgaaatcg |
2904 |
T |
|
Q |
138 |
tgggaag |
144 |
Q |
|
|
||||||| |
|
|
T |
2903 |
tgggaag |
2897 |
T |
|
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Target: scaffold0192 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0192
Description:
Target: scaffold0192; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 12373 - 12456
Alignment:
Q |
61 |
tgagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
|||||| ||||| |||||| ||| |||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||| |
|
|
T |
12373 |
tgagtcccctatatatagaggtgaagggctgcagagccgttgtaatggcacaccaggctctggcggttacaaaatcatgggaag |
12456 |
T |
|
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Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 37374 - 37292
Alignment:
Q |
62 |
gagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| |||||| ||||||||||||||||||||||| || |||| || ||||| |||||| |||||||||||||| |
|
|
T |
37374 |
gagtcccctatatatagaggtggagggctgcagagccgttgtgatggcacgccaggctctggcggttatgaaatcgtgggaag |
37292 |
T |
|
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Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 20455 - 20389
Alignment:
Q |
40 |
attctaccttggtgactgcattgagtctcctatttatagaagtggagggctgcagagccgttgtaat |
106 |
Q |
|
|
|||||||||||| ||||| ||||| ||||||| |||| |||||||||||||||||||||||||| |
|
|
T |
20455 |
attctaccttggggactgttaagagtcccctatttttagaggtggagggctgcagagccgttgtaat |
20389 |
T |
|
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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 36928 - 36846
Alignment:
Q |
62 |
gagtctcctatttatagaagtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag |
144 |
Q |
|
|
||||| ||||| |||||| |||| ||||| |||||||||||||| |||||| | || |||||||||||||| |||||||| |
|
|
T |
36928 |
gagtcccctatatatagaggtgggtggctgtagagccgttgtaatggcacacgtgtgtccgacggttacgaaattgtgggaag |
36846 |
T |
|
Back To:
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