View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1571_high_14 (Length: 434)
Name: NF1571_high_14
Description: NF1571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1571_high_14 |
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[»] scaffold0531 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-128; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 16 - 418
Target Start/End: Complemental strand, 35811480 - 35811075
Alignment:
Q |
16 |
accttaaccaatacatcagactcacataatgtaaaac----ctatgnnnnnnncaatccggatttatcccaagaaacgaaaggtcctaaggaaagagatg |
111 |
Q |
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|
|||||||||||||||||||| ||||| |||||||||| ||||| ||||||| ||||||| |||||||||||| ||||||||||||||| | |
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T |
35811480 |
accttaaccaatacatcagagtcacacaatgtaaaacgtacctatgaaaaaaacaatccgaatttatcacaagaaacgaaatgtcctaaggaaagaggta |
35811381 |
T |
|
Q |
112 |
tcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgactaaaagactaccctctatgaaaatttgaacaaaagta |
211 |
Q |
|
|
|||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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|
T |
35811380 |
tcaaaaacaagcatcgtaaagaaaaactagtcaaattatgattattcttggtcaaacaacggctaaaagactaccctctatgaaaatttgaacaaaagta |
35811281 |
T |
|
Q |
212 |
ttggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagct |
311 |
Q |
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||||||||||| ||||| ||||| |||||||||||||||||| ||||| ||||||| ||||||| |||| |||| ||||||||||||||||||| || |
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T |
35811280 |
ttggtattcccaaatattatgttgcaattgaaccaactattttatatttgtcaaggc-gctttggtaataccattttggacacgagtcctcattccaact |
35811182 |
T |
|
Q |
312 |
gagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcc |
411 |
Q |
|
|
|| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||| || |
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|
T |
35811181 |
gaattaaagttagaacactttactttattcacctgcttcttcttctatctctctgtcttagtgttatcaaataaatttggataatcttccatctcaaacc |
35811082 |
T |
|
Q |
412 |
tcttatc |
418 |
Q |
|
|
||||||| |
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|
T |
35811081 |
tcttatc |
35811075 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 80 - 415
Target Start/End: Original strand, 788117 - 788447
Alignment:
Q |
80 |
ccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgactaaaa |
179 |
Q |
|
|
|||||||| ||||| | ||||||||||| ||||||| |||| ||||||||| ||||||| ||||||||||| |||| ||| ||||| || |||||| |
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|
T |
788117 |
ccaagaaaggaaagaccttaaggaaagaggtgtcaaagacaaccattgtaaa---aaactagacaaattatgaccattcatggccaaaccacagctaaaa |
788213 |
T |
|
Q |
180 |
gactaccctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttggagg |
279 |
Q |
|
|
||||||||||| ||||| ||||||||||||| ||||||||| | |||||| ||||| ||||||||||| |||| | ||| | |||||||||||||||||| |
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|
T |
788214 |
gactaccctctctgaaa-tttgaacaaaagt-ttggtattctccgatattctgttgcaattgaaccaattattctatatatgtcaaggcggctttggagg |
788311 |
T |
|
Q |
280 |
tacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgccttagtgctatc |
379 |
Q |
|
|
|||||||| | ||||||||||||| | ||||||||||||||||| |||| | ||| |||| |||||||||||||| ||||||||||||| |||| || |
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|
T |
788312 |
aacccttttgggcacgagtcctcatagcgtctgagttaaagttagaaggcttcattttgttcatctgcttcttcttctttctctctgccttaatgctctc |
788411 |
T |
|
Q |
380 |
aaatagatttggatagtcttccatctcaagcctctt |
415 |
Q |
|
|
||||||| ||||||||||||| || ||||||||||| |
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|
T |
788412 |
aaatagacttggatagtcttctatttcaagcctctt |
788447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 21 - 333
Target Start/End: Original strand, 32278487 - 32278796
Alignment:
Q |
21 |
aaccaatacatcagactcacataatgtaaaacctatgnnnnnnncaatccggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaaca |
120 |
Q |
|
|
||||||||||||||| ||||||| ||||||||||||| || |||||| |||||||||||| | || ||||||||||| ||| ||||||| ||| |
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T |
32278487 |
aaccaatacatcagagtcacatagtgtaaaacctatgaaaagagaaa-ccggatctatcccaagaaaaggaatgtcctaaggaacgaggtgtcaaagaca |
32278585 |
T |
|
Q |
121 |
aacattgtaaagaaaaactagtc-aaattatgacaattcttggtcaaacaacgactaaaagacta--ccctctatgaaaatttgaacaaaagtattggta |
217 |
Q |
|
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| || || | ||||||||||||| ||| |||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| || || ||||||| |
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|
T |
32278586 |
accaatgaacagaaaaactagtcaaaagtatgaccattcttggccaaacaacgactaaaagactactctctctaagaaaattagagca-----attggta |
32278680 |
T |
|
Q |
218 |
ttcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagtta |
317 |
Q |
|
|
||| | ||||||||||| ||||||||| |||||| ||||| | ||||||||||||||||||||||||||| | |||| || ||||||| ||||||||| |
|
|
T |
32278681 |
ttctcatatattttgttgcaattgaacccactattctgtatctgtcaaggcggctttggaggtacccttttgggaacgaatcttcattccggctgagtta |
32278780 |
T |
|
Q |
318 |
aagttagaatgcttta |
333 |
Q |
|
|
|| ||||| |||||| |
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|
T |
32278781 |
aaactagaaggcttta |
32278796 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 80 - 418
Target Start/End: Complemental strand, 19215665 - 19215327
Alignment:
Q |
80 |
ccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgactaaaa |
179 |
Q |
|
|
|||||||| |||||| ||||| |||| || ||||||| |||| |||| || |||||| |||||||||||||| | ||||||| |||||||| |||||| |
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|
T |
19215665 |
ccaagaaaggaaaggacctaatgaaataggtgtcaaagacaaccattatacagaaaa-ctagtcaaattatgtctgttcttggccaaacaacagctaaaa |
19215567 |
T |
|
Q |
180 |
gactaccctctatg--aaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttgga |
277 |
Q |
|
|
|||| |||||| || |||||||||| | |||||||| ||||| || ||| | | | |||| |||||||||| ||||| | |||||| | |||| | |
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|
T |
19215566 |
gactgccctctctgtgaaaatttgaatagaagtattgacattcctagaaattctat-gcaattcgaccaactattctgtatctgccaaggcagttttgaa |
19215468 |
T |
|
Q |
278 |
ggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgccttagtgcta |
377 |
Q |
|
|
||||||||||| | | || |||||||||| |||||||||||| |||| || | ||||| |||||||||||||||||| |||||||| ||||||||| |
|
|
T |
19215467 |
ggtacccttttgggctcgggtcctcattcgggctgagttaaagctagacggcatcactttgttcacctgcttcttcttcattctctctgtcttagtgctc |
19215368 |
T |
|
Q |
378 |
tcaaatagatttggatagtcttccatctcaagcctcttatc |
418 |
Q |
|
|
|||||||| ||||||||||||||||||| ||||||||||| |
|
|
T |
19215367 |
tcaaataggcttggatagtcttccatctctagcctcttatc |
19215327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 239 - 364
Target Start/End: Complemental strand, 36868416 - 36868291
Alignment:
Q |
239 |
ttgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttacttta |
338 |
Q |
|
|
|||||||||||||| ||||| | |||||| |||||||||| |||||||| |||||| | ||||||||| |||||||||||| ||||| |||| |||||| |
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|
T |
36868416 |
ttgaaccaactattatgtatctgtcaaggtagctttggaggaacccttttggacacgggccctcattccggctgagttaaagctagaaggcttcacttta |
36868317 |
T |
|
Q |
339 |
ttcacctgcttcttcttctatctctc |
364 |
Q |
|
|
||||| ||||||||||||| |||||| |
|
|
T |
36868316 |
ttcacttgcttcttcttctttctctc |
36868291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 70 - 288
Target Start/End: Original strand, 37307027 - 37307246
Alignment:
Q |
70 |
cggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaaca |
169 |
Q |
|
|
||||| ||||||||||| |||| ||| ||||||||||| ||||||| || | ||||||| | |||| ||||||| || |||| ||| |||| |||||| |
|
|
T |
37307027 |
cggatctatcccaagaag-gaaatgtcataaggaaagaggtgtcaaagaccatcattgtacataaaacctagtcatataatgagcatttttggccaaaca |
37307125 |
T |
|
Q |
170 |
acgactaaaagactaccctctatg--aaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaagg |
267 |
Q |
|
|
|| ||| |||||||| |||| || ||||||||||||||||||||| |||| || | |||| | |||||||||||||||||||| ||||| | |||| |
|
|
T |
37307126 |
actgctacaagactacactctctgtgaaaatttgaacaaaagtattgatatttccagttattcttttgtaattgaaccaactattatgtatctgccaaga |
37307225 |
T |
|
Q |
268 |
cggctttggaggtaccctttt |
288 |
Q |
|
|
| ||||| |||||||||||| |
|
|
T |
37307226 |
cagctttaaaggtaccctttt |
37307246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 36150672 - 36150718
Alignment:
Q |
270 |
gctttggaggtacccttttagacacgagtcctcattccagctgagtt |
316 |
Q |
|
|
|||||||||||| |||||| | |||||||||||||||| |||||||| |
|
|
T |
36150672 |
gctttggaggtatccttttgggcacgagtcctcattccggctgagtt |
36150718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 37307256 - 37307300
Alignment:
Q |
332 |
tactttattcacctgcttcttcttctatctctctgccttagtgct |
376 |
Q |
|
|
|||||| ||||| ||||||||||||| ||||||| |||||||||| |
|
|
T |
37307256 |
tactttgttcacatgcttcttcttctttctctctaccttagtgct |
37307300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 133 - 415
Target Start/End: Complemental strand, 37050234 - 37049948
Alignment:
Q |
133 |
aaaaactagtcaaat-tatgacaattcttggtcaaacaacgactaaaagactaccctct--atgaaaatttgaacaaaagtattggtattcccggatatt |
229 |
Q |
|
|
|||||||||||||| |||||| || ||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |
|
|
T |
37050234 |
aaaaactagtcaaaagtatgaccatacttggccaaacaacgactaaaagactactctctctatgaaaatttgaacaaaagtattggtattcccatatatt |
37050135 |
T |
|
Q |
230 |
ttgttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttag-aatg |
328 |
Q |
|
|
||||| |||||||||||||||||||||| | |||| |||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||| || | |
|
|
T |
37050134 |
ctgttgcaattgaaccaactattttgtatctctcaaagcggctttggaggtacccttttgggcacgagtcctcattccggctgagttaaaactagaaagg |
37050035 |
T |
|
Q |
329 |
ctttactttattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcctctt |
415 |
Q |
|
|
||| ||||| ||||| || |||||||||| | |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
T |
37050034 |
cttcactttgttcacatgtttcttcttctttttctctgccttagtgctttcagatagacttggatagtcttccatctcaagcctctt |
37049948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 132 - 396
Target Start/End: Original strand, 24239730 - 24239993
Alignment:
Q |
132 |
gaaaaactagtcaaattatgacaattcttggtcaaacaacgactaaaagactaccct--ctatgaaaatttgaacaaaagtattggtattcccggatatt |
229 |
Q |
|
|
||||||||||||| ||||||||||||||||| |||||||| | || ||||||||| | |||||||||||||||||||||||||| ||||||| | |||| |
|
|
T |
24239730 |
gaaaaactagtcatattatgacaattcttggccaaacaactattacaagactaccatttctatgaaaatttgaacaaaagtattgatattccctgttatt |
24239829 |
T |
|
Q |
230 |
ttgttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgc |
329 |
Q |
|
|
| |||||||||| ||||||||| ||||| | |||| ||||| ||||||||||||| | |||| ||||||||||| |||||||||||| ||| | || |
|
|
T |
24239830 |
cttttgtaattgagccaactattatgtatctgccaagatagcttttgaggtacccttttgggcacgggtcctcattccggctgagttaaagctagtaggc |
24239929 |
T |
|
Q |
330 |
tttactttattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
|| ||||||||||||| ||||||||| |||| |||||||||||| ||| ||||| ||||||||| |
|
|
T |
24239930 |
ttcactttattcacctacttcttctt---tctcgatgccttagtgctctcagatagacttggatagt |
24239993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 313
Target Start/End: Original strand, 18522123 - 18522369
Alignment:
Q |
69 |
ccggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaac |
168 |
Q |
|
|
|||||| |||||||| ||| |||||||||||||||||||| | ||||| |||| || || | | ||||||||| ||||||||||| |||||||| ||||| |
|
|
T |
18522123 |
ccggatctatcccaaaaaatgaaaggtcctaaggaaagaggtttcaaagacaaccaatggacataaaaactagacaaattatgaccattcttggccaaac |
18522222 |
T |
|
Q |
169 |
aacgactaaaagac--taccctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaag |
266 |
Q |
|
|
|| |||| |||| ||| ||||||||||||||||||||||||||| |||||||| ||||| || || || ||||||||||||| | ||| | |||| |
|
|
T |
18522223 |
aaaagctaatagactatactctctatgaaaatttgaacaaaagtattcatattcccgaatattctgctgcaactgaaccaactattctatatctgccaag |
18522322 |
T |
|
Q |
267 |
gcggctttggaggtacccttttagacacgagtcctcattccagctga |
313 |
Q |
|
|
|| ||||||||| | |||||| |||| |||||||||| ||||| |
|
|
T |
18522323 |
tcgactttggaggcatccttttgagcacggatcctcattccggctga |
18522369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 373
Target Start/End: Original strand, 16832084 - 16832270
Alignment:
Q |
187 |
ctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtaccctt |
286 |
Q |
|
|
|||||||||||||||| |||||||||| |||||| | |||| || || || |||||| |||||| ||||| | |||| | |||||||||| |||||| |
|
|
T |
16832084 |
ctctatgaaaatttgagtaaaagtattgatattcctagctattctgatgcaaatgaaccgactattatgtatctgccaagacagctttggaggcaccctt |
16832183 |
T |
|
Q |
287 |
ttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgccttagt |
373 |
Q |
|
|
|| ||||| |||||||||||| ||||||||||||||| | |||| ||||| ||||| |||||||| ||| ||||||||||||||| |
|
|
T |
16832184 |
ttgaacacgtgtcctcattccaactgagttaaagttagtaggcttcactttgttcacatgcttcttattccttctctctgccttagt |
16832270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 7492257 - 7492180
Alignment:
Q |
134 |
aaaactagtcaaattatgacaattcttggtcaaacaacgactaaaagactaccc--tctatgaaaatttgaacaaaag |
209 |
Q |
|
|
||||||||||||||||| || || ||| |||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
T |
7492257 |
aaaactagtcaaattataaccatacttaagcaaacaacagctaaaagactaccctttctatgaaaatttgaacaaaag |
7492180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 394
Target Start/End: Complemental strand, 19852576 - 19852453
Alignment:
Q |
271 |
ctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgcctt |
370 |
Q |
|
|
|||||||| ||| ||||| | |||| || |||||||| | ||||||||| ||| | || | ||||| | ||| ||||||||||||| | |||||||||| |
|
|
T |
19852576 |
ctttggagttactcttttgggcacgggttctcattccgggtgagttaaaactagcaggcctcactttgtgcacgtgcttcttcttctttttctctgcctt |
19852477 |
T |
|
Q |
371 |
agtgctatcaaatagatttggata |
394 |
Q |
|
|
|||||| || ||||| ||||||| |
|
|
T |
19852476 |
agtgctctccgatagacttggata |
19852453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 151; Significance: 9e-80; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 133 - 411
Target Start/End: Complemental strand, 25168076 - 25167795
Alignment:
Q |
133 |
aaaaactagtcaaat-tatgacaattcttggtcaaacaacgactaaaagactaccct--ctatgaaaatttgaacaaaagtattggtattcccggatatt |
229 |
Q |
|
|
|||||||||||||| |||||| || ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
25168076 |
aaaaactagtcaaaagtatgaccatacttggccaaacaacgactaaaagactactctttctatgaaaatttgaacaaaagtattggtattcccatatatt |
25167977 |
T |
|
Q |
230 |
ttgttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgc |
329 |
Q |
|
|
||||| |||||||||||||||| ||||| | ||||||||||||||||||||||||||| | || |||||||| |||| ||||||||||| ||||| || |
|
|
T |
25167976 |
ctgttgcaattgaaccaactattctgtatctgtcaaggcggctttggaggtacccttttgggcatgagtcctctttccggctgagttaaaactagaaggc |
25167877 |
T |
|
Q |
330 |
tttactttattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcc |
411 |
Q |
|
|
|| ||||| ||||| || |||||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||||| |
|
|
T |
25167876 |
ttcactttgttcacatgtttcttcttctttctctctgccttagtgctttcagatagacttggatagtcttccatctcaagcc |
25167795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 69 - 373
Target Start/End: Complemental strand, 3949631 - 3949324
Alignment:
Q |
69 |
ccggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaat-tatgacaattcttggtcaaa |
167 |
Q |
|
|
|||||| ||||| |||||| | || | ||||||||| ||| ||||||| |||| | | | |||||| ||||||||| |||||| |||||||| |||| |
|
|
T |
3949631 |
ccggatctatcctaagaaagggaatgacctaaggaacgaggtgtcaaagacaactaataaacagaaaagctagtcaaaagtatgaccattcttggccaaa |
3949532 |
T |
|
Q |
168 |
caacgactaaaagactac--cctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaa |
265 |
Q |
|
|
||||||| ||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||| ||||||| |||||||| || || | |||| |
|
|
T |
3949531 |
taacgactgaaagactactccctctaagaaaatttgaacaaaagtattggtattctcagatattctgttgcaattgaatcaactattctgcatctgtcaa |
3949432 |
T |
|
Q |
266 |
ggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctct |
365 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||||| ||| ||||||| || || |||| |||||||||||||| |||||||||| || |||| |
|
|
T |
3949431 |
ggcggctttggaggtacccttctgaacacgagtcctcattctggctcagttaaaactaaaaagcttcactttattcacctgtttcttcttctttccctct |
3949332 |
T |
|
Q |
366 |
gccttagt |
373 |
Q |
|
|
|||||||| |
|
|
T |
3949331 |
gccttagt |
3949324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 240 - 376
Target Start/End: Complemental strand, 10990147 - 10990011
Alignment:
Q |
240 |
tgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttat |
339 |
Q |
|
|
||||||||||||||||||| | | | ||| |||||||||| |||||||| |||||||||||||| | ||| |||||||| ||||| | || ||||| | |
|
|
T |
10990147 |
tgaaccaactattttgtatctgttagggcagctttggaggaacccttttgtgcacgagtcctcatttcggctaagttaaagctagaaggattcactttgt |
10990048 |
T |
|
Q |
340 |
tcacctgcttcttcttctatctctctgccttagtgct |
376 |
Q |
|
|
|| | |||| |||||||| |||| ||||||||||||| |
|
|
T |
10990047 |
tctcttgctgcttcttctttctcgctgccttagtgct |
10990011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 5605501 - 5605577
Alignment:
Q |
76 |
tatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatga |
152 |
Q |
|
|
||||| |||||| |||||| ||||| ||||||| ||||||| || | |||||| |||| ||||| ||||||||||| |
|
|
T |
5605501 |
tatccaaagaaaggaaaggccctaaagaaagaggtgtcaaagaccactattgtacagaagaactactcaaattatga |
5605577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 145; Significance: 4e-76; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 148 - 413
Target Start/End: Complemental strand, 37344836 - 37344569
Alignment:
Q |
148 |
tatgacaattcttggtcaaacaacgactaaaagactaccctctat--gaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaacc |
245 |
Q |
|
|
|||||| |||||||| ||||||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||| |||||| || || || |||| | |
|
|
T |
37344836 |
tatgaccattcttggccaaacaacgactagaagactactctctataagaaaatttgaacaaaaatattggtattcccagatattatgctgcaaatgaatc |
37344737 |
T |
|
Q |
246 |
aactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacct |
345 |
Q |
|
|
||||||| ||||| | ||||||||||||||||| ||||||||| | ||||| |||||||||| ||||||||||| ||||||| || ||||| ||||||| |
|
|
T |
37344736 |
aactattatgtatatgtcaaggcggctttggagatacccttttgggcacgaatcctcattccggctgagttaaaactagaatgattcactttgttcacct |
37344637 |
T |
|
Q |
346 |
gcttcttcttctatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcctc |
413 |
Q |
|
|
| |||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
T |
37344636 |
gtttcttcttctttctctctgccttagtgctttcaaatagacttggatagtcttccatctcaagcctc |
37344569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 76 - 396
Target Start/End: Original strand, 14296093 - 14296411
Alignment:
Q |
76 |
tatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgact |
175 |
Q |
|
|
||||||||||| |||||||| ||||||||||| ||||||| || | ||||| | |||||||||| ||||| ||||| ||||||| ||| |||| || |
|
|
T |
14296093 |
tatcccaagaag-gaaaggtcttaaggaaagaggtgtcaaagaccaccattgcagggaaaaactagacaaataatgaccattcttgc-caatcaactgct |
14296190 |
T |
|
Q |
176 |
aaaagactaccctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttg |
275 |
Q |
|
|
| |||||||||||||| ||||||||||||||||||||| ||||||| |||| | ||| |||||||||||||||| ||||| | |||||| ||||| |
|
|
T |
14296191 |
acaagactaccctctacgaaaatttgaacaaaagtatttatattcccacttattctattgcaattgaaccaactattatgtatctgccaaggcatctttg |
14296290 |
T |
|
Q |
276 |
gaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgccttagtgc |
375 |
Q |
|
|
||||||||||||| ||||||||| |||||||| |||||||||||| ||| | |||| | ||| |||| |||||||||||||| ||||||| ||||||| | |
|
|
T |
14296291 |
gaggtacccttttggacacgagtgctcattccggctgagttaaagctagtaggcttcattttgttcatctgcttcttcttctttctctctaccttagtac |
14296390 |
T |
|
Q |
376 |
tatcaaatagatttggatagt |
396 |
Q |
|
|
| ||| ||||| ||||||||| |
|
|
T |
14296391 |
tctcagatagacttggatagt |
14296411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 134 - 415
Target Start/End: Complemental strand, 31092547 - 31092264
Alignment:
Q |
134 |
aaaactagtcaaattatgacaattcttggtcaaacaacgactaaaagactaccctct--atgaaaatttgaacaaaagtattggtattcccggatatttt |
231 |
Q |
|
|
||||||||||||||||| || || || |||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||| | |
|
|
T |
31092547 |
aaaactagtcaaattataaccatatttaaccaaacaacagctaaaagactaccctctctatgaaaatttgaacaaaagcattgacgttcccggatattct |
31092448 |
T |
|
Q |
232 |
gttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctt |
331 |
Q |
|
|
|| || || |||||||||| ||||| | |||| || |||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| || | |
|
|
T |
31092447 |
aatgcaaatggaccaactattctgtatctggcaagacgactttggaggtacccttttgggcacgagtcctcattccggctgagttaaatctagaaggcat |
31092348 |
T |
|
Q |
332 |
tactttattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcctctt |
415 |
Q |
|
|
||||||||||| || |||||||||| |||||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||||| |
|
|
T |
31092347 |
cactttattcacgtgattcttcttctttctctctgtcttagtgctctcagatagacttggatagtcttccagctcaagcctctt |
31092264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 242 - 396
Target Start/End: Original strand, 18811704 - 18811858
Alignment:
Q |
242 |
aaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattc |
341 |
Q |
|
|
||||||||||| ||||| | |||||| |||||||||| ||||||| | |||| ||||||||||| |||||||||||| || || |||| ||||||| | |
|
|
T |
18811704 |
aaccaactattctgtatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaagcttcactttatgc |
18811803 |
T |
|
Q |
342 |
acctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
|||||||||||||||| ||||||||||||| |||| ||||||| | ||||||||| |
|
|
T |
18811804 |
acctgcttcttcttctttctctctgccttattgctctcaaataaacttggatagt |
18811858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 396
Target Start/End: Complemental strand, 18693227 - 18693071
Alignment:
Q |
237 |
aattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactt |
336 |
Q |
|
|
|||||||||||||||||||||| | ||||| | ||||||||| |||||||||| ||| ||||||||||| ||| |||||||| ||| | ||| |||| |
|
|
T |
18693227 |
aattgaaccaactattttgtatctgtcaagacaactttggaggaacccttttaggcacaggtcctcattccggcttagttaaagctagcagacttcactt |
18693128 |
T |
|
Q |
337 |
tattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
| || | |||||||||| | |||||||||||||||| ||| | || |||||||||| |
|
|
T |
18693127 |
tgtttgcacgcttcttctt---tttctctgccttagtgctctcataaaggtttggatagt |
18693071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 8413844 - 8413928
Alignment:
Q |
270 |
gctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttct |
354 |
Q |
|
|
||||||||||||||||||| |||| ||||||||||| | |||||| ||| ||| | |||| ||||| ||| |||||||||||| |
|
|
T |
8413844 |
gctttggaggtacccttttgagcacgggtcctcattccggttgagttgaagctagtaggcttcactttgttcgcctgcttcttct |
8413928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 415
Target Start/End: Original strand, 13061794 - 13062134
Alignment:
Q |
76 |
tatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgact |
175 |
Q |
|
|
|||||||||||| |||| | ||||| ||||||| ||||||| |||| ||||| | |||||| ||||||||| || ||| ||||| || |||||||| || |
|
|
T |
13061794 |
tatcccaagaaatgaaaaggcctaatgaaagaggtgtcaaatacaaccattgaacagaaaa-ctagtcaaactacgaccattctaggccaaacaacagct |
13061892 |
T |
|
Q |
176 |
aaaagactaccctct--atgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctt |
273 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||| |||||| ||| | ||| ||||| ||||| |||| ||||||| |||||||||||| |
|
|
T |
13061893 |
aaaagactaccctctctatgaaaatttgaacaaaagtattaacattcccatctatacttttgcaattggaccaattattctgtatttgtcaaggcggctt |
13061992 |
T |
|
Q |
274 |
tggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgccttagt |
373 |
Q |
|
|
||||||||| ||||| |||| ||||||||| | |||||||||||| || || || | ||||| ||||||||||||||||||| | |||||| |||||| |
|
|
T |
13061993 |
tggaggtactcttttcagcacgggtcctcatttcggctgagttaaagctaaaaggcatcactttgttcacctgcttcttcttctttttctctgtcttagt |
13062092 |
T |
|
Q |
374 |
gctatcaaatagatttggatagtcttccatctcaagcctctt |
415 |
Q |
|
|
||| ||| ||||| ||||| |||||||||||||||| ||||| |
|
|
T |
13062093 |
gctctcagatagacttggaaagtcttccatctcaagtctctt |
13062134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 346
Target Start/End: Complemental strand, 14344348 - 14344072
Alignment:
Q |
70 |
cggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaaca |
169 |
Q |
|
|
||||| |||||||| ||| | || ||| ||||||| ||| ||||||| |||| | || | |||||||||| ||||| || ||| |||||||| |||||| |
|
|
T |
14344348 |
cggatctatcccaaaaaagggaatgtcataaggaacgaggtgtcaaagacaacccatgaacagaaaaactaatcaaaatacgaccattcttggccaaaca |
14344249 |
T |
|
Q |
170 |
acgactaaaagactaccctctatgaaaat--ttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaagg |
267 |
Q |
|
|
||||||||||||| || |||| | |||| |||||||||||||||| ||||||| |||||||| ||| |||||| |||||||| | |||| | ||||| |
|
|
T |
14344248 |
acgactaaaagaccactctctctaaaaaaaattgaacaaaagtattgatattcccagatattttattgcaattga-ccaactatat-gtatctgtcaagt |
14344151 |
T |
|
Q |
268 |
cggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctg |
346 |
Q |
|
|
|| |||||||||||||||||| |||||||||| ||||||| ||||||||| ||||| |||| ||||| |||||||| |
|
|
T |
14344150 |
cgactttggaggtacccttttggacacgagtcatcattccgattgagttaaaactagaaggcttcactttgttcacctg |
14344072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 396
Target Start/End: Original strand, 17114734 - 17114867
Alignment:
Q |
263 |
caaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctc |
362 |
Q |
|
|
|||||| ||||||||||||||||||| |||| | |||||||||| || ||||||||| ||| | |||| ||||| ||||| || |||||||||| |||| |
|
|
T |
17114734 |
caaggccgctttggaggtacccttttggacatgggtcctcattctggcagagttaaagctagcaggcttcactttgttcacatgtttcttcttctttctc |
17114833 |
T |
|
Q |
363 |
tctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
|||| ||||||||| ||| ||||| ||| ||||| |
|
|
T |
17114834 |
tctgtcttagtgctctcagatagacttgcatagt |
17114867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 396
Target Start/End: Original strand, 41035024 - 41035178
Alignment:
Q |
242 |
aaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattc |
341 |
Q |
|
|
||||||||||| | |||| ||||| |||||||||| || |||| | |||| ||||||||||| |||||||||||| ||||| |||| | ||||| |
|
|
T |
41035024 |
aaccaactattcagaatttgccaaggtagctttggaggagcctttttgggcacgggtcctcattccggctgagttaaagctagaaggcttcaaaatattc |
41035123 |
T |
|
Q |
342 |
acctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
|||||||||||||||| | ||||||||||| |||| ||| ||||| ||||||||| |
|
|
T |
41035124 |
acctgcttcttcttctttttctctgccttattgctctcagatagacttggatagt |
41035178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 396
Target Start/End: Original strand, 49491874 - 49492032
Alignment:
Q |
237 |
aattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactt |
336 |
Q |
|
|
|||||||||||||||| |||| |||||| |||||||||||||||||| | |||| ||||||||||| |||||||| ||| ||| | || | |||| |
|
|
T |
49491874 |
aattgaaccaactattcggtatacgccaaggcaactttggaggtacccttttgggcacgggtcctcattccggctgagttgaagctagtaggc-tcactt |
49491972 |
T |
|
Q |
337 |
tattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
| ||||| |||||||||| || |||| ||||||||||||| || || ||| ||||||||| |
|
|
T |
49491973 |
tgttcacatgcttcttctgctttctccctgccttagtgctctctaacagacttggatagt |
49492032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 376
Target Start/End: Original strand, 50903502 - 50903615
Alignment:
Q |
263 |
caaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctc |
362 |
Q |
|
|
|||| |||||||||||||||| ||| | |||| ||||||||| | |||||||| ||| ||| | |||| ||||| |||||||||||||||| || || | |
|
|
T |
50903502 |
caagtcggctttggaggtaccgctttgggcacgggtcctcatttcggctgagttgaagctagtaggcttcactttgttcacctgcttcttctgctttcac |
50903601 |
T |
|
Q |
363 |
tctgccttagtgct |
376 |
Q |
|
|
|||||||||||||| |
|
|
T |
50903602 |
tctgccttagtgct |
50903615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 376
Target Start/End: Original strand, 19394156 - 19394260
Alignment:
Q |
272 |
tttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgcctta |
371 |
Q |
|
|
|||| |||||||||||| | |||| ||||||||||||||| |||||||| |||| |||| ||||| |||| ||||||||||||| | ||||||| ||| |
|
|
T |
19394156 |
tttgaaggtacccttttgggcacgggtcctcattccagctaagttaaagcaagaaggcttcactttgctcacatgcttcttcttctttttctctgcttta |
19394255 |
T |
|
Q |
372 |
gtgct |
376 |
Q |
|
|
||||| |
|
|
T |
19394256 |
gtgct |
19394260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 3374429 - 3374309
Alignment:
Q |
237 |
aattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactt |
336 |
Q |
|
|
|||| ||||||||||| |||| || |||||| ||||||||| ||||||||| | ||| ||||||||||| ||||||||||| ||| |||| |||| |
|
|
T |
3374429 |
aattaaaccaactattctgtagcttccaaggcagctttggagctacccttttgggcacatgtcctcattccggctgagttaaatctagccggcttcactt |
3374330 |
T |
|
Q |
337 |
tattcacctgcttcttcttct |
357 |
Q |
|
|
| ||||| ||||||||||||| |
|
|
T |
3374329 |
tgttcacttgcttcttcttct |
3374309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 44163649 - 44163747
Alignment:
Q |
133 |
aaaaactagtc-aaattatgacaattcttggtcaaacaacgactaaaagactaccctctat--gaaaatttgaacaaaagtattggtattcccggatatt |
229 |
Q |
|
|
||||||||||| ||| |||||| |||||||| |||||||||||||||| ||||| |||| | |||||| ||| ||||||||||||||||||| |||||| |
|
|
T |
44163649 |
aaaaactagtctaaagtatgaccattcttggccaaacaacgactaaaa-actactctctctaagaaaatatgatcaaaagtattggtattcccagatatt |
44163747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 34566274 - 34566320
Alignment:
Q |
270 |
gctttggaggtacccttttagacacgagtcctcattccagctgagtt |
316 |
Q |
|
|
||||||| | |||||||||| |||||||||||||||||||||||||| |
|
|
T |
34566274 |
gctttggggatacccttttaaacacgagtcctcattccagctgagtt |
34566320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 76 - 413
Target Start/End: Complemental strand, 29347086 - 29346742
Alignment:
Q |
76 |
tatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgact |
175 |
Q |
|
|
|||||||||||| |||| | ||||| ||||||| ||||||| |||| ||||| | | |||| ||||||||| |||||| |||| || |||||||| ||| |
|
|
T |
29347086 |
tatcccaagaaaagaaaaggcctaatgaaagaggtgtcaaatacaaccattgaacataaaa-ctagtcaaactatgaccattccaggccaaacaacaact |
29346988 |
T |
|
Q |
176 |
aaaagactacc--ctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctt |
273 |
Q |
|
|
|||||||| || |||||||||||||| ||||||||||||| |||| | ||| | ||| ||||| |||||||||| ||||| | |||||||||||| |
|
|
T |
29346987 |
aaaagactgccctctctatgaaaattttaacaaaagtattgacattctcatctatactcttgcaattggaccaactattatgtatctgtcaaggcggctt |
29346888 |
T |
|
Q |
274 |
tggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctg------cttcttcttctatctctctgc |
367 |
Q |
|
|
||||||||| ||||| |||| ||||||||||| ||| |||||||| || || || | || || |||||||| ||||||||||| | |||||| |
|
|
T |
29346887 |
tggaggtactcttttgtgcacgggtcctcattccggctaagttaaagctataaggcatcacgttgttcacctgcttcttcttcttcttctttttctctgt |
29346788 |
T |
|
Q |
368 |
cttagtgctatcaaatagatttggatagtcttccatctcaagcctc |
413 |
Q |
|
|
||||||||| ||||||||| ||||| |||||||||||||||||||| |
|
|
T |
29346787 |
cttagtgctctcaaatagacttggaaagtcttccatctcaagcctc |
29346742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 80 - 415
Target Start/End: Original strand, 35526397 - 35526737
Alignment:
Q |
80 |
ccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgactaaaa |
179 |
Q |
|
|
|||||||| |||| | ||||| |||| || |||||||||||| ||||||| | |||| |||||||||||||||| || |||| | ||||| |||||| |
|
|
T |
35526397 |
ccaagaaaggaaatggcctaatgaaacaggtgtcaaaaacaaccattgtacataaaa-ctagtcaaattatgaccatgtttggcccaacaatagctaaaa |
35526495 |
T |
|
Q |
180 |
gact--accctctatgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaaccaactattttgtatttttcaaggcggctttgga |
277 |
Q |
|
|
|| | || ||||||||||||||||||||||||||| |||||| |||||| | ||| ||||| ||||| ||||||| || | |||| || ||||| |
|
|
T |
35526496 |
gattgcactctctatgaaaatttgaacaaaagtattaacattcccagatattctattgcaattgcaccaattattttgaatctgccaagacgtctttgtt |
35526595 |
T |
|
Q |
278 |
ggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgcc----ttagt |
373 |
Q |
|
|
||||||||||| | |||| ||||||||||| || ||||||||| ||||| || | ||||| ||||||||||||||||||| |||| || | ||||| |
|
|
T |
35526596 |
ggtacccttttgggcacgggtcctcattccggccgagttaaagctagaaggcatcactttgttcacctgcttcttcttcttactctttgtcttaattagt |
35526695 |
T |
|
Q |
374 |
gctatcaaatagatttggatagtcttccatctcaagcctctt |
415 |
Q |
|
|
||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
T |
35526696 |
gctctcagatagacttggatagtcttccatctcaagcctctt |
35526737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 242 - 396
Target Start/End: Complemental strand, 51524988 - 51524834
Alignment:
Q |
242 |
aaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattc |
341 |
Q |
|
|
|||||||||||||| || | |||||| |||||||||| ||||||| | |||| ||||||||||| |||||||||||| || || || | ||||||| | |
|
|
T |
51524988 |
aaccaactattttgcatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaggcctcactttatgc |
51524889 |
T |
|
Q |
342 |
acctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
|||||||||||||||| |||||| |||||| |||| ||| ||||| ||||||||| |
|
|
T |
51524888 |
acctgcttcttcttctttctctcagccttattgctctcagatagacttggatagt |
51524834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 376
Target Start/End: Complemental strand, 16893201 - 16893064
Alignment:
Q |
239 |
ttgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttacttta |
338 |
Q |
|
|
|||||||||||||| |||| | |||||| |||||||||| |||||||| |||| ||||||||||| |||||||| || ||| | |||| ||||| |
|
|
T |
16893201 |
ttgaaccaactattcggtatatggcaaggcagctttggaggcacccttttgagcacgggtcctcattccggctgagttgaacctagtaggcttcactttg |
16893102 |
T |
|
Q |
339 |
ttcacctgcttcttcttctatctctctgccttagtgct |
376 |
Q |
|
|
|||||||||||||| | || | | |||||||||||||| |
|
|
T |
16893101 |
ttcacctgcttcttttgctttttatctgccttagtgct |
16893064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 49106861 - 49107005
Alignment:
Q |
69 |
ccggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaat-tatgacaattcttggtcaaa |
167 |
Q |
|
|
|||||| |||||||||||| | || |||||||| || || ||||||| |||| || || | | ||||| |||||||| |||||| |||||||||| || |
|
|
T |
49106861 |
ccggatctatcccaagaaagggaatgtcctaagaaacaaggtgtcaaagacaaccaatgaacataaaaattagtcaaaagtatgaccattcttggtctaa |
49106960 |
T |
|
Q |
168 |
caacgactaaaagacta--ccctctatgaaaatttgaacaaaagt |
210 |
Q |
|
|
||||||||||||||||| | ||||||||||||||| ||| |||| |
|
|
T |
49106961 |
caacgactaaaagactactctctctatgaaaatttgcacagaagt |
49107005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 394
Target Start/End: Complemental strand, 31067266 - 31067144
Alignment:
Q |
273 |
ttggaggtacccttttagacacgagtcctcattccag-ctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgcctta |
371 |
Q |
|
|
|||||| ||| ||||||| |||| ||||||||||| | ||||||||||| ||| | || | ||||| | ||| ||||||||||||| | ||||||||||| |
|
|
T |
31067266 |
ttggagttacacttttaggcacgggtcctcattcccgactgagttaaagctagcaagcctcactttgtgcacatgcttcttcttctttttctctgcctta |
31067167 |
T |
|
Q |
372 |
gtgctatcaaatagatttggata |
394 |
Q |
|
|
||||| || ||||| ||||||| |
|
|
T |
31067166 |
gtgctctccgatagacttggata |
31067144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 386
Target Start/End: Original strand, 26796922 - 26796963
Alignment:
Q |
345 |
tgcttcttcttctatctctctgccttagtgctatcaaataga |
386 |
Q |
|
|
||||||||||||| |||||||||||||||||| ||| ||||| |
|
|
T |
26796922 |
tgcttcttcttctttctctctgccttagtgctctcagataga |
26796963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 134 - 415
Target Start/End: Complemental strand, 29369334 - 29369051
Alignment:
Q |
134 |
aaaactagtcaaattatgacaattcttggtcaaacaacgactaaaagactaccctct--atgaaaatttgaacaaaagtattggtattcccggatatttt |
231 |
Q |
|
|
||||||||||||||||| || || ||| ||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||| |||||||| | |
|
|
T |
29369334 |
aaaactagtcaaattataaccatacttaaccaaacaatagctaaaagactaccctctctatgaaaatttgaacaaaagcattgacattctcggatattct |
29369235 |
T |
|
Q |
232 |
gttgtaattgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctt |
331 |
Q |
|
|
|| ||||| |||||||||| ||||| | |||||||| |||||| ||| |||||| | |||| |||||||||| ||| |||||||| | ||| || | |
|
|
T |
29369234 |
aatgcaattggaccaactattctgtatctgccaaggcggatttggatgtatccttttgggcacgggtcctcattctggctcagttaaagcttgaaggcat |
29369135 |
T |
|
Q |
332 |
tactttattcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcctctt |
415 |
Q |
|
|
||||||||||| ||||||||||||| | ||| || ||||||||| ||| ||||| ||||||||||||||| |||||||||||| |
|
|
T |
29369134 |
cactttattcacgtgcttcttcttctttatctttgtcttagtgctctcagatagacttggatagtcttccagctcaagcctctt |
29369051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 396
Target Start/End: Original strand, 27786783 - 27786940
Alignment:
Q |
239 |
ttgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttacttta |
338 |
Q |
|
|
|||||||||||||||||||| | |||||| |||||||||| ||| |||| | |||| |||||||||| |||||||||||| ||||| |||| |||||| |
|
|
T |
27786783 |
ttgaaccaactattttgtatctgtcaaggtagctttggaggaaccattttgggcacggctcctcattccggctgagttaaagctagaaggcttcacttta |
27786882 |
T |
|
Q |
339 |
ttcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggatagt |
396 |
Q |
|
|
|||| |||||| ||||||| |||||| |||||| |||| ||| ||||| ||||||||| |
|
|
T |
27786883 |
ttcatctgcttattcttctttctctccgccttattgctctcagatagacttggatagt |
27786940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 36206439 - 36206569
Alignment:
Q |
262 |
tcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatct |
361 |
Q |
|
|
||||||| ||||||||| || ||||||| |||||||||||||||| || |||||||| ||||| |||| |||||||||| ||||||||||||| ||| |
|
|
T |
36206439 |
tcaaggcaactttggaggaactcttttaggcacgagtcctcattccgactaagttaaagctagaaggcttcactttattcatttgcttcttcttctttct |
36206538 |
T |
|
Q |
362 |
ctctgccttagtgctatcaaatagatttgga |
392 |
Q |
|
|
||||||||| ||||| ||| ||||| ||||| |
|
|
T |
36206539 |
ctctgccttggtgctctcagatagacttgga |
36206569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 238 - 394
Target Start/End: Original strand, 28225708 - 28225864
Alignment:
Q |
238 |
attgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttacttt |
337 |
Q |
|
|
||||||||||||||||| || || |||| ||||| |||||| |||||| ||||| ||||||||||| ||||||||||||||| | ||| ||||| |
|
|
T |
28225708 |
attgaaccaactattttatagttgccaagatagcttttgaggtatccttttggacacatgtcctcattccggctgagttaaagttaacaaacttcacttt |
28225807 |
T |
|
Q |
338 |
attcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggata |
394 |
Q |
|
|
|||| ||||||||||| | ||||||| |||||||||| ||| ||||| ||||||| |
|
|
T |
28225808 |
gatcacatgcttcttcttttctctctctaccttagtgctctcagatagacttggata |
28225864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 8831250 - 8831373
Alignment:
Q |
271 |
ctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgcctt |
370 |
Q |
|
|
|||||||| ||| ||||| |||| ||||||||||| |||||||||||| ||| | || | ||||| |||| ||||||||||||| | |||||||||| |
|
|
T |
8831250 |
ctttggagttacacttttgagcacgggtcctcattccggctgagttaaagctagcaggcctcactttgttcatgtgcttcttcttctctttctctgcctt |
8831349 |
T |
|
Q |
371 |
agtgctatcaaatagatttggata |
394 |
Q |
|
|
|||||| ||| ||||| ||||||| |
|
|
T |
8831350 |
agtgctctcagatagacttggata |
8831373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 376
Target Start/End: Original strand, 26449531 - 26449669
Alignment:
Q |
238 |
attgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttacttt |
337 |
Q |
|
|
|||||||||||||||| |||| | || |||| | ||||||||||||||||| |||||||||||||||||| |||||| | ||| ||| | |||| ||| | |
|
|
T |
26449531 |
attgaaccaactatttggtatatgtcgaggcagttttggaggtacccttttggacacgagtcctcattccggctgagctgaagctagtaggcttcactct |
26449630 |
T |
|
Q |
338 |
attcacctgcttcttcttctatctctctgccttagtgct |
376 |
Q |
|
|
|||||||||||||||| || |||||||||||||||||| |
|
|
T |
26449631 |
gttcacctgcttcttctgctttctctctgccttagtgct |
26449669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 288
Target Start/End: Complemental strand, 34548097 - 34547955
Alignment:
Q |
148 |
tatgacaattcttggtcaaacaacgactaaaagactaccctct--atgaaaatttgaacaaaagtattggtattcccggatattttgttgtaattgaacc |
245 |
Q |
|
|
|||||| |||||||| | |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| | |||||| ||||| | ||||||| |
|
|
T |
34548097 |
tatgaccattcttggcctaacaacgactaaaagactactctctctatgaaaatttgcacaaaagtattggtattctcagatattctgttgcacttgaacc |
34547998 |
T |
|
Q |
246 |
aactattttgtatttttcaaggcggctttggaggtaccctttt |
288 |
Q |
|
|
||||||| ||||| ||| | || ||||||||||||||||| |
|
|
T |
34547997 |
aactattctgtatcggccaaagaggttttggaggtaccctttt |
34547955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 7543938 - 7544075
Alignment:
Q |
76 |
tatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattcttggtcaaacaacgact |
175 |
Q |
|
|
|||||||||||| |||||| ||||| | ||||| ||||||| ||| || || | |||||| ||||||||| |||||| ||||| || |||||||| || |
|
|
T |
7543938 |
tatcccaagaaaagaaagggcctaatgtaagaggtgtcaaatacagccactgaacagaaaa-ctagtcaaactatgaccattctaggccaaacaacagct |
7544036 |
T |
|
Q |
176 |
aaaagactaccctctatgaaaatttgaacaaaagtattg |
214 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||| |
|
|
T |
7544037 |
aaaagactgccctctatgaaaatttgaacaaaagtattg |
7544075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 252
Target Start/End: Complemental strand, 16099904 - 16099675
Alignment:
Q |
21 |
aaccaatacatcagactcacataatgtaaaacctatgnnnnnnncaatccggatttatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaaca |
120 |
Q |
|
|
||||||||||||||| ||| ||||||||||||||||| || |||||| |||||| ||||| | || || |||||||| ||| || |||| ||| |
|
|
T |
16099904 |
aaccaatacatcagagtcatataatgtaaaacctatggaaagagaaa-ccggatctatcccgagaaagggaaagttctaaggaacgaggtgacaaagaca |
16099806 |
T |
|
Q |
121 |
aacattgtaaagaaaaactagtcaaat-tatgacaattcttggtcaaacaacgactaaaagactaccctctatgaaaatttgaacaaaagtattggtatt |
219 |
Q |
|
|
| || |||| | |||||||| ||||| |||||| ||||| | |||||||||||||||||| || ||||| ||| |||||||||||| |||| ||||| |
|
|
T |
16099805 |
accaatgtaca-aaaaactaatcaaaagtatgacctttcttagcaaaacaacgactaaaagaccactctctaagaatatttgaacaaaaatatttgtatt |
16099707 |
T |
|
Q |
220 |
cccggatattttgttgtaattgaaccaactatt |
252 |
Q |
|
|
||| ||||||||||| |||||||||||||||| |
|
|
T |
16099706 |
ccc-tatattttgttgcaattgaaccaactatt |
16099675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 412
Target Start/End: Original strand, 19407866 - 19408021
Alignment:
Q |
266 |
ggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttc---------ttcttc |
356 |
Q |
|
|
||||||||||||||||||||||| | |||| ||||||||||| |||||||||||| ||||| | | ||||| |||||||||||| |||||| |
|
|
T |
19407866 |
ggcggctttggaggtacccttttgggcacgggtcctcattccggctgagttaaagctagaaggaatcactttgttcacctgcttcttcttcttcttcttc |
19407965 |
T |
|
Q |
357 |
tatctctctgccttagtgctatcaaatagatttggatagtcttccatctcaagcct |
412 |
Q |
|
|
| | |||||| |||||||| ||| |||| ||||||||||||||||||||||||| |
|
|
T |
19407966 |
tttatctctgttttagtgctctcagataggcttggatagtcttccatctcaagcct |
19408021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 29132280 - 29132362
Alignment:
Q |
76 |
tatcccaagaaacgaaaggtcctaaggaaagagatgtcaaaaacaaacattgtaaagaaaaactagtcaaattatgacaattc |
158 |
Q |
|
|
|||||||||||| |||| || |||| |||||| ||||||| || | ||||||| | ||||||||||||||||||||| |||| |
|
|
T |
29132280 |
tatcccaagaaaggaaaagttctaaaaaaagaggtgtcaaagacgaccattgtacataaaaactagtcaaattatgaccattc |
29132362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 376
Target Start/End: Complemental strand, 33191369 - 33191265
Alignment:
Q |
272 |
tttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttattcacctgcttcttcttctatctctctgcctta |
371 |
Q |
|
|
|||| |||||||||| | | |||| |||||||| |||||||||||||| ||| | |||| ||||| |||| || ||||||||| | ||||||| ||| |
|
|
T |
33191369 |
tttgaaggtacccttctgggcacgggtcctcatgtcagctgagttaaagctagcaggcttcactttgctcacatgtttcttcttcattttctctgcttta |
33191270 |
T |
|
Q |
372 |
gtgct |
376 |
Q |
|
|
||||| |
|
|
T |
33191269 |
gtgct |
33191265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0531 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0531
Description:
Target: scaffold0531; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 394
Target Start/End: Complemental strand, 10382 - 10228
Alignment:
Q |
240 |
tgaaccaactattttgtatttttcaaggcggctttggaggtacccttttagacacgagtcctcattccagctgagttaaagttagaatgctttactttat |
339 |
Q |
|
|
||||||||||||| |||| | |||| | ||||||||| ||| ||||||| |||| ||||||||||| ||||||||||| ||| | || | ||||| | |
|
|
T |
10382 |
tgaaccaactattatgtagctgccaagacagctttggagttactcttttaggcacgggtcctcattccggctgagttaaaactagcaggcctcactttgt |
10283 |
T |
|
Q |
340 |
tcacctgcttcttcttctatctctctgccttagtgctatcaaatagatttggata |
394 |
Q |
|
|
||| ||||||||||||| | |||||||||||||||| || ||||| ||||||| |
|
|
T |
10282 |
gcacgtgcttcttcttctttttctctgccttagtgctctccgatagacttggata |
10228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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