View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1571_low_15 (Length: 432)
Name: NF1571_low_15
Description: NF1571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1571_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 8 - 414
Target Start/End: Original strand, 47732397 - 47732801
Alignment:
| Q |
8 |
gagaaaatactaacataacaactaacacttgtcattaacttttttatatgaatctcaaaatcataaaaattattttgatcaagcagcctaagtagctaga |
107 |
Q |
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| T |
47732397 |
gagaaaatattaacataacaactaacacttgtcattaacttttttatatgaatctcaaaatcgtaagaattattttgatcaaacagtcta-gtagctaaa |
47732495 |
T |
|
| Q |
108 |
aattcatattgaagatgaataagtaacgtatccgaagttcaaacctcatccctatatatattatgcgatattatttaccaattaaaataaactcatgcag |
207 |
Q |
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|||| ||||||||||| ||||| ||| ||||| ||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| | || |
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| T |
47732496 |
aatttatattgaagataaataaataaggtatctaaagttcaaacctcgtccctatatatattatgcgatgttatttgccctttaaaataagctcacggag |
47732595 |
T |
|
| Q |
208 |
acctcacaattgtaaggttgctaagtcaatacctagcggtcaccatgctaattttattaatttcatccagccttttannnnnnnnaattgaatgttgcgc |
307 |
Q |
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||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
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| T |
47732596 |
acctcgcaattgtaatgttgctaagtcaatacctagtggtcaccatgctaattttattaatttcatccagcctttta-tttttttaattgaatgctgcgc |
47732694 |
T |
|
| Q |
308 |
ctattttctatatcttatcttagttagatagattagagttacaagggcctctctctctatatatataatttttaacaaaaacaaggcgttccaaaaagca |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
47732695 |
ctattttctatatcttatcttagttagatagattagagttacaagggcctctctctctatatatatactttttaacaaaaacaaggcgttccaaaaagca |
47732794 |
T |
|
| Q |
408 |
attccaa |
414 |
Q |
| |
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||||||| |
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| T |
47732795 |
attccaa |
47732801 |
T |
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