View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1571_low_5 (Length: 521)
Name: NF1571_low_5
Description: NF1571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1571_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 396; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 1 - 461
Target Start/End: Complemental strand, 8337905 - 8337449
Alignment:
Q |
1 |
catttaatgaaggaatggaaattaatattttctttttgactccaatgaatggcagaaattatattgtcta-tctttctgaaattaagtgaaaacatatgt |
99 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
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|
T |
8337905 |
catttaatgaaggaatagaaattaatattttctttttgactccaatgaatggcagaaattatattgtctagtctttctgaaattaagtgaaaacatattt |
8337806 |
T |
|
Q |
100 |
cgatatgttttattacgagagtaagtactaaactttgtttgttctttaagagttttcttttgcaaaactctttaagaaaaacatcaaaattatatagctt |
199 |
Q |
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|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |
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|
T |
8337805 |
cgatatgttttattacaagagtaagtactaaactttgtttgttctttaagagttttcttttacaaaactctttaagaaaaacatcaaaattatatagcct |
8337706 |
T |
|
Q |
200 |
agtcttgtttctaagagtggagaagttgcattaaatggaaatgaaaatattgttattatatttactacacattttgatcactattataagcattaaacca |
299 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
T |
8337705 |
agtcttgtttctaagagtggagaagttgcattaaatggaaatgaaaatattgttattatatttactacacatttcgatcactattataagcattaaacca |
8337606 |
T |
|
Q |
300 |
t-ttttaagttcattcaataaatgatgtagacagcatattatatagacatcatacatcaattcatcatagacgactacatatatcatttattgaatgaac |
398 |
Q |
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|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
8337605 |
ttttttaagttcattcaataaatgatgtagacagcatattatatagacatcatacatcaattcatcatagacgactacatatatcatttattgaatgaac |
8337506 |
T |
|
Q |
399 |
tataaaagtaaatttttatttataatagtgatcggatggtgcatattaaagtttggtctagta |
461 |
Q |
|
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
8337505 |
tttaaaagtaaatttttat------tagtgatcggatggtgcatattaaagtttggtctagta |
8337449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 45472475 - 45472409
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatgg |
437 |
Q |
|
|
||||||||| ||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||| |
|
|
T |
45472475 |
gactacatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtgatcgaatgg |
45472409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 25272402 - 25272349
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
|||||||| |||||||||| ||||| |||||||||| |||||||||||||||||| |
|
|
T |
25272402 |
acatatattatttattgaacgaact-taaaagtaaaattttatttataatagtga |
25272349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 429
Target Start/End: Original strand, 13295464 - 13295519
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaattttt-atttataatagtga |
429 |
Q |
|
|
||||||||||||||||||||||||| ||| || ||||||| |||||||||||||| |
|
|
T |
13295464 |
acatatatcatttattgaatgaacttaaaatgtgaatttttgatttataatagtga |
13295519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 8266366 - 8266310
Alignment:
Q |
383 |
catttattgaatgaactataaaagtaaatttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
|||||| |||||||||| ||| | ||||||||||||||||||||| ||||||||| |
|
|
T |
8266366 |
catttaatgaatgaacttagaaaatgaatttttatttataatagtgaccggatggtg |
8266310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 43893203 - 43893251
Alignment:
Q |
383 |
catttattgaatgaactataaaagtaaatttttatttataatagtgatc |
431 |
Q |
|
|
||||||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
T |
43893203 |
catttattgaatgaacttataaattgaatttttatttataatagtgatc |
43893251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 44274607 - 44274544
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||||||||||||||||||||||||| ||| ||| || || |||| ||||||||||||| |||| |
|
|
T |
44274607 |
gactacatatatcatttattgaatgaatcta-aaatgtcaacttttgtttataatagtgaccgga |
44274544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 434
Target Start/End: Original strand, 36864500 - 36864560
Alignment:
Q |
374 |
tacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
|||||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||||| |
|
|
T |
36864500 |
tacatatatcatttattgaatgaatcta-aaaagtgaacttttatttataatagtgatcgga |
36864560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 439
Target Start/End: Original strand, 23420988 - 23421051
Alignment:
Q |
376 |
catatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
|||| ||||||||||||||||||| ||||||||| |||| ||| || |||||||||||||||| |
|
|
T |
23420988 |
catacatcatttattgaatgaacttaaaaagtaaacttttgtttctattagtgatcggatggtg |
23421051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 25776965 - 25776910
Alignment:
Q |
375 |
acatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||| |
|
|
T |
25776965 |
acatatatcatttattgaatgaacctaaaaaaataaaattttatttataatagtga |
25776910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 7313896 - 7313838
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
||||||||||||||||||||||||||| | |||||| || ||||| |||||| ||||| |
|
|
T |
7313896 |
gactacatatatcatttattgaatgaatttaaaaagtgaacttttacttataaaagtga |
7313838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 445
Target Start/End: Original strand, 13356216 - 13356286
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatggtgcatatt |
445 |
Q |
|
|
||||| ||||||||||||||||||| ||||||| |||||| |||||||| ||| |||| |||| ||||| |
|
|
T |
13356216 |
acatacatcatttattgaatgaacttaaaaagtagatttttgcttataataatgaccggagggtgtatatt |
13356286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 25358113 - 25358060
Alignment:
Q |
381 |
atcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||||||||||||||| ||||| |||||||||| |||||||||||| |||| |
|
|
T |
25358113 |
atcatttattgaatgaatcttaaaaataaatttttacttataatagtgaccgga |
25358060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 439
Target Start/End: Original strand, 33652680 - 33652709
Alignment:
Q |
410 |
atttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
33652680 |
atttttatttataatagtgatcggatggtg |
33652709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Complemental strand, 36897803 - 36897742
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatg |
436 |
Q |
|
|
||||| |||||||||| |||||| | ||| ||||||||||| |||||||||| |||||||| |
|
|
T |
36897803 |
acatacatcatttatttaatgaatttaaaatgtaaatttttacttataatagtaatcggatg |
36897742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 14351342 - 14351403
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatg |
436 |
Q |
|
|
|||||||||||||||||||||||| | || | |||||||||||||||||||||||||||| |
|
|
T |
14351342 |
acatatatcatttattgaatgaacctaacaaatgaatttttatttataatagtgatcggatg |
14351403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 48860591 - 48860532
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||| |
|
|
T |
48860591 |
acatacatcatttattgaatgaatttaaaaagtaaaaatttatttataatagtgatcgga |
48860532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 436
Target Start/End: Original strand, 36688427 - 36688489
Alignment:
Q |
374 |
tacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatg |
436 |
Q |
|
|
|||||||||||||||||||||||| | |||||| || |||||||||||||| | |||||||| |
|
|
T |
36688427 |
tacatatatcatttattgaatgaatttaaaaagtgaaattttatttataataataatcggatg |
36688489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 427
Target Start/End: Original strand, 2254028 - 2254084
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagt |
427 |
Q |
|
|
||||||||||||||||||||||||||| | |||| |||| |||| ||||||||||| |
|
|
T |
2254028 |
gactacatatatcatttattgaatgaatttaaaaaataaacttttgtttataatagt |
2254084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 422
Target Start/End: Original strand, 12596755 - 12596802
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttata |
422 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
T |
12596755 |
acatatatcatttattgaatgaacctaaaaagtaaatttttgtttata |
12596802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 52281182 - 52281109
Alignment:
Q |
372 |
actacatatatcatttattgaatgaactataaaa-gtaaatttttatttataatagtgatcggatggtgcatatt |
445 |
Q |
|
|
|||||||| ||||||||||||||||| ||||||| | | |||||| |||||||||||| ||||||||| ||||| |
|
|
T |
52281182 |
actacatacatcatttattgaatgaa-tataaaatgcatatttttgcttataatagtgaccggatggtgtatatt |
52281109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 16578589 - 16578642
Alignment:
Q |
376 |
catatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
|||| ||||||||||||||||||| ||| ||| ||||||| |||||||||||| |
|
|
T |
16578589 |
catacatcatttattgaatgaacttaaaatgtagatttttacttataatagtga |
16578642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 439
Target Start/End: Original strand, 17657982 - 17658050
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
||||||||||||||||||||||||||| ||| |||| |||| ||||| |||||| | |||||| |||||| |
|
|
T |
17657982 |
gactacatatatcatttattgaatgaatcta-aaaaataaagttttacttataacaatgatcgaatggtg |
17658050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 439
Target Start/End: Complemental strand, 53176369 - 53176305
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaa-gtaaatttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
||||| |||||||| |||||||| ||||||| || |||||||| ||||||||||||||||| |||| |
|
|
T |
53176369 |
acatacatcatttaatgaatgaa-tataaaatgttaatttttacttataatagtgatcggagggtg |
53176305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 26636518 - 26636573
Alignment:
Q |
374 |
tacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
|||||| ||||||||||||||||| ||| |||| |||||||||| |||||||||||| |
|
|
T |
26636518 |
tacatacatcatttattgaatgaatcta-aaaaataaatttttacttataatagtga |
26636573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 424
Target Start/End: Complemental strand, 34937160 - 34937113
Alignment:
Q |
377 |
atatatcatttattgaatgaactataaaa-gtaaatttttatttataat |
424 |
Q |
|
|
||||||||||||||||||||| ||||||| |||||||||| |||||||| |
|
|
T |
34937160 |
atatatcatttattgaatgaa-tataaaatgtaaatttttgtttataat |
34937113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 39940561 - 39940624
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||||||| || |||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |
|
|
T |
39940561 |
gactacatacattatttattgaatgaatcta-aaaagtaaatttttacttataatagtgatcgga |
39940624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 12750559 - 12750613
Alignment:
Q |
373 |
ctacatatatcatttattgaatgaactataaaagtaaatttttatttataatagt |
427 |
Q |
|
|
||||||| ||||||||||||||||| | |||||| ||||||||||||||||||| |
|
|
T |
12750559 |
ctacatacatcatttattgaatgaatttaaaaagtcaatttttatttataatagt |
12750613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 437
Target Start/End: Original strand, 47446706 - 47446772
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatgg |
437 |
Q |
|
|
||||||||| ||||||||||||||||| | |||||| | |||||| |||||||||||| ||||||| |
|
|
T |
47446706 |
gactacatacatcatttattgaatgaatttaaaaagtgagtttttacttataatagtgaccggatgg |
47446772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 19580245 - 19580186
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||| ||||||||||||||||| | ||||||| ||||||| ||||||| ||||||||| |
|
|
T |
19580245 |
acatacatcatttattgaatgaattttaaaagtcaatttttgcttataatcgtgatcgga |
19580186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 10256854 - 10256906
Alignment:
Q |
381 |
atcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||||||||||||||||| ||||||| || |||| ||||||||||||||||| |
|
|
T |
10256854 |
atcatttattgaatgaact-taaaagttaaatttttcttataatagtgatcgga |
10256906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 14214608 - 14214677
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatggtgcatat |
444 |
Q |
|
|
||||| |||||||||||||||||| |||||||| ||||| |||||||||||| |||| |||| |||| |
|
|
T |
14214608 |
acatacatcatttattgaatgaacctaaaaagtaagtttttgcttataatagtgaccggagggtgtatat |
14214677 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 425
Target Start/End: Complemental strand, 8243418 - 8243370
Alignment:
Q |
377 |
atatatcatttattgaatgaactataaaagtaaatttttatttataata |
425 |
Q |
|
|
|||||||| ||||| ||||||| | ||| |||||||||||||||||||| |
|
|
T |
8243418 |
atatatcacttattaaatgaaccaaaaatgtaaatttttatttataata |
8243370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 10256842 - 10256783
Alignment:
Q |
375 |
acatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||| ||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||| |
|
|
T |
10256842 |
acatacatcatttattgaatgaatcta-aaaagtgaattttttcttataatagtgatcgga |
10256783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 8256909 - 8256967
Alignment:
Q |
381 |
atcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
||||||||||||||||| | |||||| ||||||||||||||||| |||||||| |||| |
|
|
T |
8256909 |
atcatttattgaatgaatttaaaaagtgaatttttatttataatactgatcggagggtg |
8256967 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 39836944 - 39837000
Alignment:
Q |
375 |
acatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatc |
431 |
Q |
|
|
||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |
|
|
T |
39836944 |
acatacatcatttattgaatgaatcta-aaaagtaaacttttatttataatagtgatc |
39837000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 42681241 - 42681187
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
|||||||||||||||| |||||| | ||| ||||||||||| |||||||||||| |
|
|
T |
42681241 |
acatatatcatttattaaatgaatttaaaatgtaaatttttacttataatagtga |
42681187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 42787700 - 42787753
Alignment:
Q |
381 |
atcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
|||||||||||||||||| |||| | ||||||| |||||||||||||||||| |
|
|
T |
42787700 |
atcatttattgaatgaacctaaaaaatgaatttttgtttataatagtgatcgga |
42787753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 39960314 - 39960378
Alignment:
Q |
372 |
actacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatg |
436 |
Q |
|
|
||||||||||||||| |||||||||| | ||| ||||||||||||||||| ||| |||||||| |
|
|
T |
39960314 |
actacatatatcattaattgaatgaatttaaaatataaatttttatttataacagtaatcggatg |
39960378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 785627 - 785690
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
|||||||||||||||||||||||||||| ||| || ||||||| |||||||||||| |||| |
|
|
T |
785627 |
gactacatatatcatttattgaatgaacgtaaaatgtgaatttttccttataatagtgaccgga |
785690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 24934612 - 24934558
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
||||| |||||||||||||||||| ||| ||||||||| |||||||||||||| |
|
|
T |
24934612 |
acatacatcatttattgaatgaacctaaaatgtaaattttgatttataatagtga |
24934558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 3106080 - 3106028
Alignment:
Q |
275 |
gatcactattataagcattaaaccatttttaagttcattcaataaatgatgta |
327 |
Q |
|
|
|||||||||||||| || |||| | ||||| ||||||||||||||||||||| |
|
|
T |
3106080 |
gatcactattataaacaaaaaacaacttttaggttcattcaataaatgatgta |
3106028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 26824992 - 26825056
Alignment:
Q |
370 |
cgactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
||||||||||| ||||||| |||||||| | |||| ||||||||| ||||| ||||||||||| |
|
|
T |
26824992 |
cgactacatatgtcatttaatgaatgaatttaaaaatcaaatttttacttatattagtgatcgga |
26825056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 439
Target Start/End: Original strand, 27554576 - 27554640
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcggatggtg |
439 |
Q |
|
|
||||| |||||| |||||||| | | ||||||||||||||| ||||| ||||||||||| |||| |
|
|
T |
27554576 |
acatacatcattaattgaatgtattttaaaagtaaatttttgcttatattagtgatcggagggtg |
27554640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 30138863 - 30138930
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaa-gtaaatttttatttataatagtgatcggatggt |
438 |
Q |
|
|
||||| ||| |||||| |||||||||| | ||||| ||||||||||| |||||| |||||||||||||| |
|
|
T |
30138863 |
gactatatacatcattaattgaatgaa-tctaaaatgtaaatttttacttataacagtgatcggatggt |
30138930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 31319591 - 31319666
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtgatcggatggtgcatatta |
446 |
Q |
|
|
||||||||| ||||||| ||||||||| ||| |||| || |||||| ||||||||||||||||| |||| |||||| |
|
|
T |
31319591 |
gactacatacatcattttttgaatgaatctaaaaaa-tatatttttccttataatagtgatcggagggtgtatatta |
31319666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 15718472 - 15718528
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatc |
431 |
Q |
|
|
||||| ||||||||||||||||| | ||||||| ||||||| |||||||||||||| |
|
|
T |
15718472 |
acatacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtgatc |
15718528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 13841913 - 13841855
Alignment:
Q |
371 |
gactacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
||||| ||| ||||||||||||||||| | |||||||||||||| |||||||||||| |
|
|
T |
13841913 |
gactaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtga |
13841855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 13841923 - 13841981
Alignment:
Q |
372 |
actacatatatcatttattgaatgaa-ctataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
|||||||| ||||||||||||||||| ||| ||| || ||| ||||||||||||||||| |
|
|
T |
13841923 |
actacatacatcatttattgaatgaacctaaaaaggtcaatatttatttataatagtga |
13841981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 15037814 - 15037752
Alignment:
Q |
372 |
actacatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
|||||||| |||||||||||||||||| ||||||| |||||| ||||||||| ||| |||| |
|
|
T |
15037814 |
actacatacatcatttattgaatgaacctaaaaagtagatttttgtttataatactgaccgga |
15037752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 35781287 - 35781234
Alignment:
Q |
376 |
catatatcatttattgaatgaactataaaagtaaatttttatttataatagtga |
429 |
Q |
|
|
||||||||||||||||||||||| |||| |||| |||| ||||||||||||| |
|
|
T |
35781287 |
catatatcatttattgaatgaacctaaaaaataaaattttgtttataatagtga |
35781234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 434
Target Start/End: Complemental strand, 6883659 - 6883627
Alignment:
Q |
402 |
aaaagtaaatttttatttataatagtgatcgga |
434 |
Q |
|
|
|||||||| |||||||||||||||||||||||| |
|
|
T |
6883659 |
aaaagtaactttttatttataatagtgatcgga |
6883627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 425
Target Start/End: Original strand, 7286655 - 7286703
Alignment:
Q |
377 |
atatatcatttattgaatgaactataaaagtaaatttttatttataata |
425 |
Q |
|
|
|||||||||||||||||||||| |||| || |||||||||||||||| |
|
|
T |
7286655 |
atatatcatttattgaatgaacctaaaaaatatatttttatttataata |
7286703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 36308053 - 36307997
Alignment:
Q |
375 |
acatatatcatttattgaatgaactataaaagtaaatttttatttataatagtgatc |
431 |
Q |
|
|
||||| |||||||||||||||||| |||| | || |||||||||||||||||||| |
|
|
T |
36308053 |
acatacatcatttattgaatgaacctaaaaaatcaacttttatttataatagtgatc |
36307997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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