View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1571_low_8 (Length: 484)
Name: NF1571_low_8
Description: NF1571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1571_low_8 |
 | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold0074 (2 HSPs) |
| | |
|
| [»] scaffold0264 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0007 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 7205 - 7670
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
7205 |
aaatatgattcctaaaatttcagattttggtttggctcggattgttgaaataagtcaagatgagggaaatacaaatagaattgctggaacatagtaagtt |
7304 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| ||||||| | ||||||||| ||| ||||| || ||||||||||| ||| |||| |||| || ||||||||||||||||||| |
|
|
| T |
7305 |
ttgaatgttgacacctctgttatctttt-tctactcttttttttg--gttcaaatcttttcgcacaacttcataattaaaatacatttaatttattttgt |
7401 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7402 |
agtggttatatgtctccggaatatgcaatgcttggacaattttctgaaaaatctgacatttatagttttggagttatgcttttagagattattgctggaa |
7501 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
7502 |
agaagaataaaagtccatttactccacaccatgttgcttatgacctcttgaatcatgtgagtgtaatgatctagcagtagtatcctttcatttttccttt |
7601 |
T |
|
| Q |
401 |
tatgataaatgcatatactctcgagtcagaacatggaacaatctttagtcggagtttatatatcttttg |
469 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
7602 |
tatgataattgcatatactctcgagtcagaacatggaacaatctttagtcggactttatatatcttttg |
7670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 292; Significance: 1e-164; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 463
Target Start/End: Complemental strand, 20236121 - 20235665
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20236121 |
aaatatgattcctaaaatttctgattttggtttggctcgaattgttgaaataagtcaagatgagggaagtacaaatagaattgttggaacattgtaagtt |
20236022 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| ||||||| || ||||||||| ||| ||||| ||||||||||||||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
20236021 |
ttgaatgttgacccctctgttatctttt-tctactttttttta-----tacaaatcttttcccacttattcttaattaaaatacatttaatttattttgt |
20235928 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20235927 |
agtggttatatgtctccggaatatgcaatggtcggacaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
20235828 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | |
|
|
| T |
20235827 |
agaagaataaaagttcatttactccacaccatgttgcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtgccctttcatttttcgtat |
20235728 |
T |
|
| Q |
401 |
tatgataaatgcatatactctcgagtcagaacatggaacaatctttagtcggagtttatatat |
463 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||| ||||||||| |||| | || ||||||||| |
|
|
| T |
20235727 |
tatgataaatatatatacgctctagtcagaacttggaacaataattagacagattttatatat |
20235665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 463
Target Start/End: Complemental strand, 22130105 - 22129649
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22130105 |
aaatatgattcctaaaatttctgattttggtttggctcgaattgttgaaataagtcaagatgagggaagtacaaatagaattgttggaacattgtaagtt |
22130006 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| ||||||| || ||||||||| ||| ||||| ||||||||||||||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
22130005 |
ttgaatgttgacccctctgttatctttt-tctactttttttta-----tacaaatcttttcccacttattcttaattaaaatacatttaatttattttgt |
22129912 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22129911 |
agtggttatatgtctccggaatatgcaatggtcggacaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
22129812 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | |
|
|
| T |
22129811 |
agaagaataaaagttcatttactccacaccatgttgcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtgccctttcatttttcgtat |
22129712 |
T |
|
| Q |
401 |
tatgataaatgcatatactctcgagtcagaacatggaacaatctttagtcggagtttatatat |
463 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||| ||||||||| |||| | || ||||||||| |
|
|
| T |
22129711 |
tatgataaatatatatacgctctagtcagaacttggaacaataattagacagattttatatat |
22129649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 410
Target Start/End: Original strand, 22206884 - 22207281
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22206884 |
aaatatgattcctaaaatttctgattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaatagttggaacattgtaagtt |
22206983 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| ||||||| || | | | || ||| | | ||||||||| ||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
22206984 |
ttgaatgttgacccctttatcttctttttttt------------tttgtacaaatcgtttcccacttcttcttaattataatacatttaatttattttgc |
22207071 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22207072 |
agtggttatatgtctccagaatatgcaatgcttggacaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgttggaa |
22207171 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||||| | |
|
|
| T |
22207172 |
agaagaacaaaagttcatttactccacaccatgttgcttatgacctcttgaatcatgtgagtgttatgatctaactataggaccctttcatttttcctat |
22207271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 151 - 469
Target Start/End: Complemental strand, 18995641 - 18995323
Alignment:
| Q |
151 |
caaatcttttcccacttcttcttaatgaatatacatttaatttattttgcagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaa |
250 |
Q |
| |
|
||||||||||| ||| |||| ||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
18995641 |
caaatcttttcacacgacttcaaaattaaaatacatttaatttattttgtagtggttatatgtctccggaatatgcaatgcttggacaattttctgaaaa |
18995542 |
T |
|
| Q |
251 |
atccgacatttatagttttggagttatgcttttagagattattgctggaaagaagaataaaagttcatttaatccacaccatgtttcttatgacctcttg |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
18995541 |
atccgacatttatagttttggagttatgcttttagagattattgctggaaagaagaataaaagtccatttactccacaccatgttgcttatgacctcttg |
18995442 |
T |
|
| Q |
351 |
aattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttttatgataaatgcatatactctcgagtcagaacatggaacaatctttagtc |
450 |
Q |
| |
|
||| ||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18995441 |
aatcatgtgagtgtaatgatctagcattagtatcctttcatttttcctgttatgataaatgcatatactctcgagtcagaacatggaacaatttttagtc |
18995342 |
T |
|
| Q |
451 |
ggagtttatatatcttttg |
469 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
18995341 |
ggactttatatatcttttg |
18995323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 400
Target Start/End: Complemental strand, 18979724 - 18979328
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18979724 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagatgagggaagtacagatagaattgttggaacattgtaagtt |
18979625 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| |||||| ||| |||||||| ||| ||||| |||||| | ||||||| |||||||||||| || ||||||||||||||| || |
|
|
| T |
18979624 |
ttgaatgttggccct-ctgttatccttt-tctacttttgttttttg-gtacaagtgttttccctcttcttcttaattaaattacatttaatttattatgt |
18979528 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
18979527 |
agtggttatatgtctccggaatatgtaatgtttggacaattttctgaaaaatccgacatatatagttttggagttatgcttgtagagattattgctggaa |
18979428 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||| || ||| |||||||||| ||||||||| ||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
18979427 |
agaagaataaaagttcgtttactccacatcatgttgctgatggcctcttgaatcatgtgagtgcaatgatctagcagtagtatcctttcatttttccttt |
18979328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 400
Target Start/End: Complemental strand, 20084020 - 20083624
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20084020 |
aaatatgattactaaaatttcagattttggtttggctcgaattgttgaaataagtcaagatgagggaagtacagatagaattgttggaacattgtaagtt |
20083921 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| |||||| ||| |||||| | ||| | || |||||| | ||||||| |||||||||||| || ||||||||||||||| || |
|
|
| T |
20083920 |
ttgaatgttggccct-ctgttaaccttta-caacttttgttttttg-gtacaagtgttttccctcttcttcttaattaaattacatttaatttattatgt |
20083824 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||||| ||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
20083823 |
agtggttatatgtctccggaatatgtaatgttcggacaattttctgaaaaatccgacatttatagttttggagttatgcttatagagattattgctggaa |
20083724 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||| || ||| |||||||||| ||||||||| ||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
20083723 |
agaagaataaaagttcgtttactccacatcatgttgctgatggcctcttgaatcatgtgagtgcaatgatctagcagtagtatcctttcatttttccttt |
20083624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 400
Target Start/End: Complemental strand, 18991076 - 18990680
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18991076 |
aaatatgattcctaaaatttcagattttggtttggctcgaattattgaaataagtcaagatgagggaagtacagatagaattgttggaacattgtaagtt |
18990977 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| |||||| ||| |||||| | |||| | || |||||| | ||||||| |||||||||||| || ||||||||||||||||||| |
|
|
| T |
18990976 |
ttgaatgttggccct-ctgttaacctttccc-acttttgttttttg-gtacaagtgttttccctcttcttcttaattaaattacatttaatttattttgc |
18990880 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||| |||||||||||| ||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
18990879 |
agtatttatatgtctccggaatatgtaatgtttggacaattttctgaaaattccgacatttatagttttggagttatgcttttagagattattgctgaaa |
18990780 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttt |
400 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||| || ||| |||||| ||| ||||||||| ||||||||| | ||||| ||||| ||||||||||| |
|
|
| T |
18990779 |
agaagaataaaagttcgtttactccacatcatgttgctgatggcctcttaaatcatgtgagtgcaatgatctattagtagtatcctttaatttttccttt |
18990680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 24386989 - 24387351
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
|||||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||| | |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24386989 |
aaatatgatttctaaaatttcatattttgttttggctcgaattgttgaaataattcaatatgagggaagtacagatagaattgttggaacattgtaagtt |
24387088 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatcatttctctacnnnnnnnnnnnnngtacaaatcttttcccacttcttcttaatgaatatacatttaatttattttgc |
200 |
Q |
| |
|
||| |||||| ||| |||||||| |||| | || |||||| | ||||||| |||||||||||| || |||||||||||||||||| |
|
|
| T |
24387089 |
ttgaatgttggccct-ctgttatcctttccc-acttttgttttttg-gtacaagtgttttccctcttcttcttaattaaattacatttaatttattttgt |
24387185 |
T |
|
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
24387186 |
agtggttatatgtct-------atgtaatgtttggacaattttctgaaaaatccgacatttatagttttggagttctgcttttcgagattattgctggaa |
24387278 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatcta |
373 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||| || ||| ||| |||||| ||||||||| ||||||||| |
|
|
| T |
24387279 |
agaagaataaaagttcgtttactccacatcatgttgctgatggccttttgaatcatgtgagtgcaatgatcta |
24387351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18995799 - 18995676
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
18995799 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaattagtcaagatgagggaaatacaaatagaattgctggaacattgtaagtt |
18995700 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatc |
124 |
Q |
| |
|
||| ||||||| || ||||||||| |
|
|
| T |
18995699 |
ttgaatgttgatccctctgttatc |
18995676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 195 - 392
Target Start/End: Complemental strand, 22085992 - 22085795
Alignment:
| Q |
195 |
ttttgcagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattg |
294 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||| ||| | |||||||| | | |
|
|
| T |
22085992 |
ttttacagtggttatatgtcgccagaatatgcaatgtttggacaattttctgaaaaatcagatgtttatagttttggagtcatgatcctagagattgtag |
22085893 |
T |
|
| Q |
295 |
ctggaaagaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatt |
392 |
Q |
| |
|
||||||||||||||| |||||||| | | ||||| |||||| || || ||||||||||| ||||||||||||||| || |||||||| | ||||||| |
|
|
| T |
22085892 |
ctggaaagaagaatataagttcatatgaaccacaacatgttgctaatagcctcttgaattctgtgagtgtaatgatatagcaatagtatcttttcatt |
22085795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 200 - 392
Target Start/End: Complemental strand, 21968104 - 21967912
Alignment:
| Q |
200 |
cagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctgga |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||| || | ||||||||||||||||| || |||||||||||||||| ||| | |||||||| | |||||| |
|
|
| T |
21968104 |
cagtggttatatgtctccagaatatgcaatgttttgacaattttctgaaaaatcagatgtttatagttttggagtcatgatcctagagattgtagctgga |
21968005 |
T |
|
| Q |
300 |
aagaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatt |
392 |
Q |
| |
|
|||||||||| |||||||| | | ||||| |||||| || || ||||||||||| |||||||||||| || || |||||||| | ||||||| |
|
|
| T |
21968004 |
aagaagaatataagttcatatgaaccacaacatgttgctaatagcctcttgaattctgtgagtgtaattatatagcaatagtatcttttcatt |
21967912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22086178 - 22086077
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22086178 |
aaatatgattcctagaatttcagattttggtttggcacgaatggtcgaaataagtcaagacgaaggaagtacaaatagaattgttggaacatagtaagtt |
22086079 |
T |
|
| Q |
101 |
tt |
102 |
Q |
| |
|
|| |
|
|
| T |
22086078 |
tt |
22086077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 201 - 392
Target Start/End: Complemental strand, 22001927 - 22001736
Alignment:
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | ||||||||||||||||| || ||||||||||||||||| ||| | |||||||| | ||||||| |
|
|
| T |
22001927 |
agtggttatatgtctccagaatatgcaatgtttagacaattttctgaaaaatcagatatttatagttttggagtcatgatcatagagattgtagctggaa |
22001828 |
T |
|
| Q |
301 |
agaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatt |
392 |
Q |
| |
|
|||||||| |||||||| | | |||| ||||||| || |||||||||| ||||||||||||||| || |||||||| | ||||||| |
|
|
| T |
22001827 |
agaagaatgtaagttcatatgaatcacaacatgttttcaataggctcttgaattctgtgagtgtaatgatatagcaatagtatcttttcatt |
22001736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21968294 - 21968194
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || || || |||||||||||||| || |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
21968294 |
aaatatgattcctaaaatttcagattttggtttggcacggatggtcgaaataagtcaagaggaaggaagtacaaatagaattgttggaacatagtaagtt |
21968195 |
T |
|
| Q |
101 |
t |
101 |
Q |
| |
|
| |
|
|
| T |
21968194 |
t |
21968194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 20233467 - 20233572
Alignment:
| Q |
204 |
ggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaaaga |
303 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||| ||||||| |||||| | ||||||| |
|
|
| T |
20233467 |
ggttatatgtctccagaatatgcgatgctcgggcaattttctgagaaatctgatgtttatagttttggagtcatggttttagaaattattaccggaaaga |
20233566 |
T |
|
| Q |
304 |
agaata |
309 |
Q |
| |
|
|||||| |
|
|
| T |
20233567 |
agaata |
20233572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 22127451 - 22127556
Alignment:
| Q |
204 |
ggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaaaga |
303 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||| ||| ||||||| |||||| | ||||||| |
|
|
| T |
22127451 |
ggttatatgtctccagaatatgcgatgctcgggcaattttctgagaaatctgatgtttatagttttggagtcatggttttagaaattattaccggaaaga |
22127550 |
T |
|
| Q |
304 |
agaata |
309 |
Q |
| |
|
|||||| |
|
|
| T |
22127551 |
agaata |
22127556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 21967564 - 21967466
Alignment:
| Q |
294 |
gctggaaagaagaataaaagttcatttaatccacaccatgtttcttatgacctcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatt |
392 |
Q |
| |
|
|||||||||||||||| |||||||| | | ||||| |||||| || || ||||||||||| |||||||||||| || || |||||||| | ||||||| |
|
|
| T |
21967564 |
gctggaaagaagaatataagttcatatgaaccacaacatgttgctaatagcctcttgaattctgtgagtgtaattatatagcaatagtatcttttcatt |
21967466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 20233288 - 20233385
Alignment:
| Q |
5 |
atgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtttt |
102 |
Q |
| |
|
|||||||| ||||| |||||||||||| | ||| ||||||| ||| ||| || ||| | |||||||||||||| || || ||||||||||||||||| |
|
|
| T |
20233288 |
atgattccaaaaatatcagattttggtcttgctagaattgtagaactaaaccaggacaaaggaagtacaaataggatcgtgggaacattgtaagtttt |
20233385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 22127272 - 22127369
Alignment:
| Q |
5 |
atgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtttt |
102 |
Q |
| |
|
|||||||| ||||| |||||||||||| | ||| ||||||| ||| ||| || ||| | |||||||||||||| || || ||||||||||||||||| |
|
|
| T |
22127272 |
atgattccaaaaatatcagattttggtcttgctagaattgtagaactaaaccaggacaaaggaagtacaaataggatcgtgggaacattgtaagtttt |
22127369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 247; Significance: 1e-137; HSPs: 2)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 151 - 469
Target Start/End: Original strand, 49818 - 50136
Alignment:
| Q |
151 |
caaatcttttcccacttcttcttaatgaatatacatttaatttattttgcagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaa |
250 |
Q |
| |
|
||||||||||| ||| |||| ||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
49818 |
caaatcttttcacacgacttcaaaattaaaatacatttaatttattttgtagtggttatatgtctccggaatatgcaatgcttggacaattttctgaaaa |
49917 |
T |
|
| Q |
251 |
atccgacatttatagttttggagttatgcttttagagattattgctggaaagaagaataaaagttcatttaatccacaccatgtttcttatgacctcttg |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
49918 |
atccgacatttatagttttggagttatgcttttagagattattgctggaaagaagaataaaagtccatttactccacaccatgttgcttatgacctcttg |
50017 |
T |
|
| Q |
351 |
aattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttttatgataaatgcatatactctcgagtcagaacatggaacaatctttagtc |
450 |
Q |
| |
|
||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50018 |
aatcatgtgagtgtaatgatctagcattagtatcctttcatttttccttttatgataaatgcatatactctcgagtcagaacatggaacaatctttagtc |
50117 |
T |
|
| Q |
451 |
ggagtttatatatcttttg |
469 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
50118 |
ggactttatatatcttttg |
50136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 49660 - 49783
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
49660 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaattagtcaagatgagggaaatacaaatagaattgctggaacattgtaagtt |
49759 |
T |
|
| Q |
101 |
ttgtatgttgaaccttctgttatc |
124 |
Q |
| |
|
||| ||||||| || ||||||||| |
|
|
| T |
49760 |
ttgaatgttgatccctctgttatc |
49783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 116; Significance: 8e-59; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 346 - 469
Target Start/End: Complemental strand, 15281 - 15158
Alignment:
| Q |
346 |
tcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttttatgataaatgcatatactctcgagtcagaacatggaacaatctt |
445 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15281 |
tcttgaattatgtgagtgtaatgatctaacaatagtaccctttcatttttccttttatgataaatgcatatactctcaagtcagaacatggaacaatctt |
15182 |
T |
|
| Q |
446 |
tagtcggagtttatatatcttttg |
469 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
15181 |
tagtcggactttatatatcttttg |
15158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 10401537 - 10401422
Alignment:
| Q |
192 |
ttattttgcagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagatta |
291 |
Q |
| |
|
|||||||| || |||||||| ||||||||||||||||||||||| |||||||| || ||||| || |||||||||||||||| ||| |||| || |||| |
|
|
| T |
10401537 |
ttattttgtagaggttatatatctccagaatatgcaatgcttggacaattttcggagaaatctgatgtttatagttttggagtcatgattttggaaatta |
10401438 |
T |
|
| Q |
292 |
ttgctggaaagaagaa |
307 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
10401437 |
ttactggaaagaagaa |
10401422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10401707 - 10401609
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagt |
99 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| | ||| ||||||||||| ||| |||||| | |||| |||||||| || || |||||||||||||| |
|
|
| T |
10401707 |
aaatatgattccaaaaatatcagattttggtcttgctagaattgttgaattaaaccaagacaaaggaaacacaaataggatcgtcggaacattgtaagt |
10401609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9102802 - 9102910
Alignment:
| Q |
1 |
aaatatgattcctaaaatttcagattttggtttggctcgaattgttgaaataagtcaagacgagggaagtacaaatagaattgttggaacattgtaagtt |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| ||||| || || ||||||||| |||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
9102802 |
aaatatgactcctaaaattttagattttggtttggctcaaattgacaaagcaaatcaagacgaaggaagtacaaatagaattgttggagcatagtaagtt |
9102901 |
T |
|
| Q |
101 |
ttgtatgtt |
109 |
Q |
| |
|
||| ||||| |
|
|
| T |
9102902 |
ttgaatgtt |
9102910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 469846 - 469770
Alignment:
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttat |
277 |
Q |
| |
|
||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | | |||||||||||||| |
|
|
| T |
469846 |
agtggttatatgtctccggaatatgcaatgcacggacaattttctgagaaatccgatgtgttcagttttggagttat |
469770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 9102997 - 9103092
Alignment:
| Q |
208 |
atatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaaaga |
303 |
Q |
| |
|
|||||||||||||||||| ||| || || |||||||||||| |||||||||| | ||||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
9102997 |
atatgtctccagaatatgtgatgtatgaacagatttctgaaaaataggacatttatattcttggagttatgattttagagattgttgctgcaaaga |
9103092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 47619485 - 47619564
Alignment:
| Q |
195 |
ttttgcagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagt |
274 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||| ||| |||||||||||| |
|
|
| T |
47619485 |
ttttacagtggttatatgtctcctgaatatgcaatgcttggaaaattctctgaaaaatcagacgtttttagttttggagt |
47619564 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 47627662 - 47627770
Alignment:
| Q |
200 |
cagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctgga |
299 |
Q |
| |
|
||||||||| |||||||| ||||||||||||| ||| |||||||| || || || || ||| |||||||||||| ||| || | ||||||||| |||| |
|
|
| T |
47627662 |
cagtggttacatgtctccggaatatgcaatgcatggacaattttcagagaagtctgatgtttttagttttggagtgatggttctcgagattattagtgga |
47627761 |
T |
|
| Q |
300 |
aagaagaat |
308 |
Q |
| |
|
|| |||||| |
|
|
| T |
47627762 |
aaaaagaat |
47627770 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 47593640 - 47593737
Alignment:
| Q |
204 |
ggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaaa |
301 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| || ||||| || || || || ||| ||||||||| || || |||||||||||||| ||||||| |
|
|
| T |
47593640 |
ggttacatgtccccagaatatgcaatgcttggacacttttcagagaagtcggatgtttttagttttggtgtcattgttttagagattattactggaaa |
47593737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 47584565 - 47584667
Alignment:
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagattattgctggaa |
300 |
Q |
| |
|
||||||||||| |||||||||||||| |||| ||| | ||||||| ||||| || | |||||||||||| | ||| || ||||||||||| ||||| |
|
|
| T |
47584565 |
agtggttatatatctccagaatatgccatgcatggatacttttctgtgaaatcagatgtgtatagttttggaatcatggttctagagattattagtggaa |
47584664 |
T |
|
| Q |
301 |
aga |
303 |
Q |
| |
|
||| |
|
|
| T |
47584665 |
aga |
47584667 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 47698491 - 47698525
Alignment:
| Q |
65 |
ggaagtacaaatagaattgttggaacattgtaagt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |
|
|
| T |
47698491 |
ggaagtacaaatagaattgttggaacatagtaagt |
47698525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 47698603 - 47698676
Alignment:
| Q |
201 |
agtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagt |
274 |
Q |
| |
|
||||| |||||||||| ||||||||||||| ||| ||| |||| |||||||| ||| ||| ||||||||||| |
|
|
| T |
47698603 |
agtggctatatgtctcaggaatatgcaatgcatggacaactttcagaaaaatcggacgttttcagttttggagt |
47698676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 19939301 - 19939334
Alignment:
| Q |
198 |
tgcagtggttatatgtctccagaatatgcaatgc |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
19939301 |
tgcagtggttatatgtctccagaatatgcaatgc |
19939334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 19970440 - 19970473
Alignment:
| Q |
198 |
tgcagtggttatatgtctccagaatatgcaatgc |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
19970440 |
tgcagtggttatatgtctccagaatatgcaatgc |
19970473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 2712035 - 2711944
Alignment:
| Q |
198 |
tgcagtggttatatgtctccagaatatgcaatgcttgggcaattttctgaaaaatccgacatttatagttttggagttatgcttttagagat |
289 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||| ||||| || ||||| || |||| ||||||||||||| |||| || ||||| |
|
|
| T |
2712035 |
tgcagtggatatatgtctccagaatatgcaatgaaagggttgttttcagagaaatcagatatttttagttttggagttttgctcttggagat |
2711944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 31196268 - 31196228
Alignment:
| Q |
191 |
tttattttgcagtggttatatgtctccagaatatgcaatgc |
231 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
31196268 |
tttatgttgcagtggatatatggctccagaatatgcaatgc |
31196228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 31214880 - 31214840
Alignment:
| Q |
191 |
tttattttgcagtggttatatgtctccagaatatgcaatgc |
231 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||| |
|
|
| T |
31214880 |
tttatgttgcagtggatatatggctccagaatatgcaatgc |
31214840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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