View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1576_high_15 (Length: 480)

Name: NF1576_high_15
Description: NF1576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1576_high_15
NF1576_high_15
[»] chr8 (31 HSPs)
chr8 (42-366)||(4898803-4899127)
chr8 (218-459)||(21437509-21437747)
chr8 (42-202)||(21437740-21437897)
chr8 (360-463)||(4738948-4739051)
chr8 (353-459)||(4683267-4683373)
chr8 (351-463)||(4752087-4752199)
chr8 (129-441)||(4910991-4911296)
chr8 (352-460)||(4705477-4705582)
chr8 (346-463)||(4728209-4728326)
chr8 (303-459)||(10449247-10449402)
chr8 (352-459)||(4887981-4888085)
chr8 (352-460)||(4717636-4717744)
chr8 (344-460)||(4921042-4921158)
chr8 (323-390)||(4898718-4898785)
chr8 (380-460)||(4691320-4691400)
chr8 (51-97)||(4738299-4738345)
chr8 (42-88)||(4921333-4921379)
chr8 (53-98)||(4751674-4751719)
chr8 (1-39)||(4899162-4899200)
chr8 (1-39)||(4911458-4911496)
chr8 (133-202)||(10449024-10449093)
chr8 (53-125)||(4717208-4717280)
chr8 (53-125)||(4727785-4727857)
chr8 (139-195)||(4727880-4727936)
chr8 (53-97)||(4911373-4911417)
chr8 (133-192)||(4872224-4872283)
chr8 (132-194)||(4751762-4751824)
chr8 (53-94)||(4705051-4705092)
chr8 (132-197)||(4738389-4738454)
chr8 (42-94)||(4888538-4888590)
chr8 (53-97)||(10448935-10448979)


Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 42 - 366
Target Start/End: Complemental strand, 4899127 - 4898803
Alignment:
Q  42 cctttgacatttttcagtgtagatgataatcctgatctttgtatgacagaatcctgtggaaagaagaattgttttgtaccacttacgatt---gcattaa 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||  |||   |||||||    
T  4899127 cctttgacatttttcagtgtagatgataatcctgatctttgtatgacggaatcttgtggaaagaagaatttttttgtaccacttattattattgcattaa 4899028  T
Q  139 ttgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggtacttcaataatgatttcagtttttgctcaatacttgaatgatcatta 238  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||   | |||||||||| |||||||| |||||||||| |||    
T  4899027 ttgtaatgcttttgatttttcttggatattggatattcagaacacaaaaaggtacttcaat---ggtttcagttttcgctcaataattgaatgatcgtta 4898931  T
Q  239 cattatcttgaagtcataaacaaattcttagtggtagaaaccatgtagctactagattatagaaaaatggttttgttccaatctctatatccacattcat 338  Q
    |||||| |||||||||||||||||||| |  ||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||| ||||    
T  4898930 cattatgttgaagtcataaacaaattcattatggtagaaaccatgtagttacttgatgacagaaaaatggttttgttccaatctctatatccacaatcat 4898831  T
Q  339 gtttaaattttgtccacatccttgctta 366  Q
    ||||||||||||||||||||||||||||    
T  4898830 gtttaaattttgtccacatccttgctta 4898803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 459
Target Start/End: Complemental strand, 21437747 - 21437509
Alignment:
Q  218 tcaatacttgaatgatcattacattatcttgaagtcataaacaaattcttagtggtagaaaccatgtagctactagattataga-aaaatggttttgttc 316  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |   || |||||||||   | | |||||||||||||||    
T  21437747 tcaataattgaatgatcattacattatgttgaagtcataaacaaattcttagtagtagaaatc---ta-ctactagatatgacagaaaatggttttgttc 21437652  T
Q  317 caatctctatatccacattcatgtttaaattttgtccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattcta 416  Q
    |||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||| |||||||||||  |  |||| ||| |  | ||||||||    
T  21437651 caatctctatatccacattcatgtttaagttttttccatatccatgcttattttcattcaactttatttatcaatgtagtagctacgtgctcaaattcta 21437552  T
Q  417 aggaaagaggttcaatgaaatcaaaacaccaaaaattcagtta 459  Q
    || ||||  |||  ||||||||||| || |||| |||||||||    
T  21437551 agaaaaggcgttggatgaaatcaaagcatcaaacattcagtta 21437509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 21437897 - 21437740
Alignment:
Q  42 cctttgacatttttcagtgtagatgataatcctgatctttgtatgacagaatcctgtggaaagaagaattgttttgtaccacttacgattgcattaattg 141  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||| |||||||||||  ||| ||| |||||||||   ||||||||| |||    
T  21437897 cctttgacttttttcagtgtagatgataatcctgatctttgtatgacgaaatcatgtggaaagaacgattttttagtaccactt---attgcattagttg 21437801  T
Q  142 taatgtttttgatttttcttggatattggatattcacaacacaaaaaggtacttcaataat 202  Q
    ||||| ||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||||    
T  21437800 taatggtttcgatttttcttgtatgttggatattcagaacactaaaaggtacttcaataat 21437740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 4738948 - 4739051
Alignment:
Q  360 ttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaattcagtta 459  Q
    |||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4738948 ttgcatattttcattcaattttatttatcacagctgtacttacgtcttcaaattctaaggaaaggggttcaatgaaatcaaaacaccaaaaattcagtta 4739047  T
Q  460 ttct 463  Q
    ||||    
T  4739048 ttct 4739051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 353 - 459
Target Start/End: Original strand, 4683267 - 4683373
Alignment:
Q  353 cacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaat 452  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||  ||||||||||||||||||| |||||||    
T  4683267 cacatccttgcatattttcattcaattttatttatcacagctgtagttacgccttcaaattctaagaaaaggagttcaatgaaatcaaaacatcaaaaat 4683366  T
Q  453 tcagtta 459  Q
    |||||||    
T  4683367 tcagtta 4683373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 4752087 - 4752199
Alignment:
Q  351 tccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaa 450  Q
    |||||||| |||  ||||||||||| ||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  4752087 tccacatctttgaatattttcattcgattttatttattacagctgtagttacgccttcaaattctaaggaaaggggttcaatgaaatcaaaacaccaaaa 4752186  T
Q  451 attcagttattct 463  Q
     |||| |||||||    
T  4752187 tttcaattattct 4752199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 129 - 441
Target Start/End: Complemental strand, 4911296 - 4910991
Alignment:
Q  129 attgcattaattgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggtacttcaataatgatttcagtttttgctcaatacttga 228  Q
    |||||||||||| ||||  ||||| ||| |||||||| ||| |||||||    ||||||||||| ||| |||||||| | |||||  |||||||| ||||    
T  4911296 attgcattaattataattcttttgttttctcttggattttgcatattcaacggacaaaaaggtatttctataatgatattagtttccgctcaataattga 4911197  T
Q  229 atgatcattacattatcttgaagtcataaacaaat--tcttagtggtagaaaccatgtagctactagattatagaaaaatggttttgttccaatctctat 326  Q
    |||||||||||||| | |||||||||||| |||||  | || ||||||||||||   ||  |||||||| | ||||||| |||||||   |||||| |||    
T  4911196 atgatcattacattgtgttgaagtcataatcaaattgtgtttgtggtagaaacc---ta-atactagatgacagaaaaagggttttgcctcaatctatat 4911101  T
Q  327 atccacattcatgtttaaattttgtccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaaga-g 425  Q
    | ||||| |||||| ||| |||| || ||||||||||  |||||||||||||||| || ||||   |||||| ||| |  | ||||||| |||||||| |    
T  4911100 agccacactcatgtgtaagttttttcaacatccttgc--attttcattcaattttcttgatca---ctgtagctacgtggtcaaattct-aggaaagagg 4911007  T
Q  426 gttcaatgaaatcaaa 441  Q
    ||||||||||||||||    
T  4911006 gttcaatgaaatcaaa 4910991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 4705477 - 4705582
Alignment:
Q  352 ccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaa 451  Q
    |||||||||||| ||||||||||  |||||||||||||||| || |||||| |||  |||||||   ||||| |||||||||||||||||||||||||||    
T  4705477 ccacatccttgcatattttcattgtattttatttatcacagatgaagttacatctccaaattct---gaaaggggttcaatgaaatcaaaacaccaaaaa 4705573  T
Q  452 ttcagttat 460  Q
    |||| ||||    
T  4705574 ttcacttat 4705582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 4728209 - 4728326
Alignment:
Q  346 ttttgtccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacac 445  Q
    |||| |||| |||||| | |||||||||  ||||||||||||||||||||| | | | |||| | |||| || ||||| |||||||||||||| ||||||    
T  4728209 ttttttccatatccttacatattttcatctaattttatttatcacagctgtggctgcgtcttcatattcaaatgaaaggggttcaatgaaatccaaacac 4728308  T
Q  446 caaaaattcagttattct 463  Q
    ||||||||||||||||||    
T  4728309 caaaaattcagttattct 4728326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 10449247 - 10449402
Alignment:
Q  303 aaatggttttgttccaatctctatatccacattcatgtttaaattttgt--ccacatccttgcttattttcattcaattttatttatcacagctgtagtt 400  Q
    ||||||||||  ||||||||||||||| |||||||||||||| |||| |  |||||||||||| ||||||||||||||||| |||||||   |||||| |    
T  10449247 aaatggtttttctccaatctctatatctacattcatgtttaatttttttttccacatccttgcatattttcattcaattttctttatca---ctgtagct 10449343  T
Q  401 acttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaattcagtta 459  Q
    || |  | ||| |||||| |||  | ||||||||||||||| || |||| |||||||||    
T  10449344 acatggtcaaaatctaagaaaaaggattcaatgaaatcaaagcatcaaacattcagtta 10449402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 459
Target Start/End: Complemental strand, 4888085 - 4887981
Alignment:
Q  352 ccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaa 451  Q
    |||||| ||||| ||||||||||| |||||||||||||| | ||||||||  ||   || |||||||||||| |||||||||||||||||||| |||||     
T  4888085 ccacattcttgcatattttcattctattttatttatcactgatgtagttatatc---aagttctaaggaaaggggttcaatgaaatcaaaacatcaaaag 4887989  T
Q  452 ttcagtta 459  Q
    ||||||||    
T  4887988 ttcagtta 4887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 4717636 - 4717744
Alignment:
Q  352 ccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaa 451  Q
    |||||||||| | || ||||||| ||||||||||||||||| || || ||| |||  |||||||||  | |  |||||||||||||||||||||||||||    
T  4717636 ccacatcctttcatactttcattgaattttatttatcacagatgaagatacgtctccaaattctaataataagggttcaatgaaatcaaaacaccaaaaa 4717735  T
Q  452 ttcagttat 460  Q
    |||||||||    
T  4717736 ttcagttat 4717744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 344 - 460
Target Start/End: Complemental strand, 4921158 - 4921042
Alignment:
Q  344 aattttgtccacatccttgcttattttcattcaattttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaac 443  Q
    |||||| |||| |||||||| |||  |||||||||||| |||||||| ||||||||||| |||| |||||||||  |||| |||||||||| |||||| |    
T  4921158 aattttttccaaatccttgcatatcatcattcaattttctttatcactgctgtagttacgtcttcaaattctaaaaaaaggggttcaatgatatcaaagc 4921059  T
Q  444 accaaaaattcagttat 460  Q
    |  ||| ||||||||||    
T  4921058 atgaaagattcagttat 4921042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 4898785 - 4898718
Alignment:
Q  323 ctatatccacattcatgtttaaattttgtccacatccttgcttattttcattcaattttatttatcac 390  Q
    ||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||  |||||||    
T  4898785 ctatatccatattcatgtttaatttttttcaacatccttgcttattttcattcaattttccttatcac 4898718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 4691320 - 4691400
Alignment:
Q  380 ttatttatcacagctgtagttacttcttaaaattctaaggaaagaggttcaatgaaatcaaaacaccaaaaattcagttat 460  Q
    |||||||| |||| ||||||||| |||| ||| ||||||||||| |||||||||||||| ||||| || | ||||||||||    
T  4691320 ttatttatgacagttgtagttacgtcttcaaactctaaggaaaggggttcaatgaaatccaaacatcagagattcagttat 4691400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 4738299 - 4738345
Alignment:
Q  51 tttttcagtgtagatgataatcctgatctttgtatgacagaatcctg 97  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||    
T  4738299 ttttgcagtgtggatgataatcctgatctttgtatgacagaatcctg 4738345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 4921379 - 4921333
Alignment:
Q  42 cctttgacatttttcagtgtagatgataatcctgatctttgtatgac 88  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||    
T  4921379 cctttgacttctttcagtgtagatgataatcctgatctttgtatgac 4921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 4751674 - 4751719
Alignment:
Q  53 tttcagtgtagatgataatcctgatctttgtatgacagaatcctgt 98  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  4751674 tttcagtgtggatgataatcctgatctttgtatgacggaatcctgt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4899200 - 4899162
Alignment:
Q  1 taatctagtaaattaaaagtttgtcttatacaaatatca 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  4899200 taatctagtaacttaaaagtttgtcttatacaaatatca 4899162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4911496 - 4911458
Alignment:
Q  1 taatctagtaaattaaaagtttgtcttatacaaatatca 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  4911496 taatctagtaacttaaaagtttgtcttatacaaatatca 4911458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 10449024 - 10449093
Alignment:
Q  133 cattaattgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggtacttcaataat 202  Q
    |||||||||||||  ||||||||| |||||||| ||||||||  | || |||||||||||||||| ||||    
T  10449024 cattaattgtaatccttttgatttctcttggattttggatatatagaagacaaaaaggtacttcattaat 10449093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 4717208 - 4717280
Alignment:
Q  53 tttcagtgtagatgataatcctgatctttgtatgacagaatcctgtggaaagaagaattgttttgtaccactt 125  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||   |||||||||   | |||||||||||    
T  4717208 tttcagtgtggatgataatcctgatctttgcatgacggaatcctgcaaaaagaagaacgttgttgtaccactt 4717280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 4727785 - 4727857
Alignment:
Q  53 tttcagtgtagatgataatcctgatctttgtatgacagaatcctgtggaaagaagaattgttttgtaccactt 125  Q
    ||||||||| || || |||||||||||||||||||||||||||||   |||||||||   | |||||||||||    
T  4727785 tttcagtgtggaagacaatcctgatctttgtatgacagaatcctgcaaaaagaagaacattgttgtaccactt 4727857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 4727880 - 4727936
Alignment:
Q  139 ttgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggtactt 195  Q
    |||||||  ||||||||| |||||||| ||||||||||| || ||||||||||||||    
T  4727880 ttgtaatccttttgatttctcttggattttggatattcagaagacaaaaaggtactt 4727936  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 4911417 - 4911373
Alignment:
Q  53 tttcagtgtagatgataatcctgatctttgtatgacagaatcctg 97  Q
    |||||| |||||||||||||||||||||||||||||  |||||||    
T  4911417 tttcagggtagatgataatcctgatctttgtatgacgaaatcctg 4911373  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 4872283 - 4872224
Alignment:
Q  133 cattaattgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggta 192  Q
    ||||||||| |||  ||||||||| |||||||| ||||||||||| || |||||||||||    
T  4872283 cattaattgcaatccttttgatttctcttggattttggatattcagaagacaaaaaggta 4872224  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 4751762 - 4751824
Alignment:
Q  132 gcattaattgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggtact 194  Q
    |||||| |||||||  ||||||||| | |||||| ||||||||||| || |||||||||||||    
T  4751762 gcattagttgtaatccttttgatttcttttggattttggatattcagaagacaaaaaggtact 4751824  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 4705051 - 4705092
Alignment:
Q  53 tttcagtgtagatgataatcctgatctttgtatgacagaatc 94  Q
    ||||||||| |||||||||||||||||||||| ||| |||||    
T  4705051 tttcagtgtggatgataatcctgatctttgtaagacggaatc 4705092  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 4738389 - 4738454
Alignment:
Q  132 gcattaattgtaatgtttttgatttttcttggatattggatattcacaacacaaaaaggtacttca 197  Q
    |||||| |||||||  |||| |||| | |||||| ||||||||||| || ||||||||||||||||    
T  4738389 gcattagttgtaatcatttttatttcttttggattttggatattcagaagacaaaaaggtacttca 4738454  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 4888590 - 4888538
Alignment:
Q  42 cctttgacatttttcagtgtagatgataatcctgatctttgtatgacagaatc 94  Q
    |||||||| | ||||||||| ||||||||||||| |||||||| ||| |||||    
T  4888590 cctttgacttctttcagtgtggatgataatcctggtctttgtaagactgaatc 4888538  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 10448935 - 10448979
Alignment:
Q  53 tttcagtgtagatgataatcctgatctttgtatgacagaatcctg 97  Q
    ||||||||| |||||||||||||| ||||||| ||| ||||||||    
T  10448935 tttcagtgtggatgataatcctgaactttgtacgacggaatcctg 10448979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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