View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1576_high_45 (Length: 266)
Name: NF1576_high_45
Description: NF1576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1576_high_45 |
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|
[»] scaffold0493 (1 HSPs) |
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[»] scaffold0239 (1 HSPs) |
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[»] scaffold0022 (1 HSPs) |
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[»] scaffold0005 (1 HSPs) |
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[»] scaffold0121 (1 HSPs) |
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[»] scaffold0067 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2145849 - 2145722
Alignment:
Q |
1 |
atgtacgagtaaaatttctaaatgtaaaaaaggagtgaaggtaggtaaaatatcaatgtacattccatgtagagtaatgaaaagaaataataatgtgttg |
100 |
Q |
|
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2145849 |
atgtaggagtaaaatttctaaatgtaaaaaaggagtgaaggtaggtaaaatatcaatgtacattccatgtagagtaatgaaaagaaataataatgtgttg |
2145750 |
T |
|
Q |
101 |
aaataatgcaatcgaaggtatgtaaata |
128 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
2145749 |
aaataatgcaatcgaaggtatgtaaata |
2145722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 1339262 - 1339209
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
1339262 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttttttca |
1339209 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 34969839 - 34969786
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
34969839 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
34969786 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 18871330 - 18871278
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
18871330 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttttttca |
18871278 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 35224828 - 35224882
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
T |
35224828 |
agggaacttctatggtacactcacaattttgagtgtaccggtactattgtttcac |
35224882 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 29638734 - 29638787
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
29638734 |
gggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcac |
29638787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 32518748 - 32518800
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||| | |||||| |
|
|
T |
32518748 |
ggaacttctatggtacactcacaattttgagtgtaccagtactcctgtttcac |
32518800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 34315122 - 34315170
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
T |
34315122 |
tagggaacttctatggtacacccacaattttgagtgtatcggtactctt |
34315170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 24025843 - 24025795
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||| | ||||||| ||||||||||||||||||||||||||| |
|
|
T |
24025843 |
tagggaacttcaacggtacacccacaattttgagtgtaccggtactctt |
24025795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 9226609 - 9226562
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||| ||||| |||||||||||||||||||||| |||| |
|
|
T |
9226609 |
agggaacttctatgctacacccacaattttgagtgtaccggtattctt |
9226562 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 33954859 - 33954814
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactct |
174 |
Q |
|
|
|||||||||||||||| ||||||||||||||||| | ||||||||| |
|
|
T |
33954859 |
gggaacttctatggtatactcacaattttgagtgcatcggtactct |
33954814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 6015821 - 6015857
Alignment:
Q |
146 |
actcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||| |||||||| |||||| |
|
|
T |
6015821 |
actcacaattttgagtgtaccagtactcttgtttcac |
6015857 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 24248810 - 24248846
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
24248810 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
24248846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 26811165 - 26811129
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtac |
165 |
Q |
|
|
|||||||||||| |||||||||||||||||| ||||| |
|
|
T |
26811165 |
gggaacttctatagtacactcacaattttgaatgtac |
26811129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 10778985 - 10779044
Alignment:
Q |
123 |
taaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
10778985 |
taaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
10779044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 2526582 - 2526525
Alignment:
Q |
125 |
aatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
2526582 |
aatagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
2526525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 16004533 - 16004585
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16004533 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
16004585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 38955040 - 38955094
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
38955040 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
38955094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 44998817 - 44998764
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
44998817 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
44998764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 27967919 - 27967864
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
27967919 |
tagggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcac |
27967864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 42244537 - 42244583
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
42244537 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
42244583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 46630648 - 46630698
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
46630648 |
aacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
46630698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 36570055 - 36570002
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
36570055 |
gggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcac |
36570002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 21515395 - 21515344
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
21515395 |
ggaacttctatgatacactcacaattttgagtgtaccggtactcttgtttca |
21515344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 24292383 - 24292332
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
T |
24292383 |
gaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcac |
24292332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 33612930 - 33612884
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
33612930 |
gggaacttctatggtacacccacaattttgagtgtaccggtactctt |
33612884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 48549663 - 48549717
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||| |||||| |||||||||||||||||||||||||| ||||||| |||||| |
|
|
T |
48549663 |
agggaatttctatagtacactcacaattttgagtgtaccgatactcttgtttcac |
48549717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 46221993 - 46222045
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||| |||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
T |
46221993 |
gggaactt-tatggtacactcacaattttgagtataccggtactcttctttcac |
46222045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 54499981 - 54499928
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||| ||||| ||| |||||||||||||||||||||||| |||||| |
|
|
T |
54499981 |
gggaacttctatcgtacattcataattttgagtgtaccggtactcttgtttcac |
54499928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 46633623 - 46633669
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||| || |||||||||||||||||||||||||||||||| |
|
|
T |
46633623 |
gggaacttctttgccacactcacaattttgagtgtaccggtactctt |
46633669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 23639235 - 23639279
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtact |
172 |
Q |
|
|
|||||| |||||||||||||||| |||||| |||||||||||||| |
|
|
T |
23639235 |
agggaatttctatggtacactcataattttaagtgtaccggtact |
23639279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 52257539 - 52257487
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| |
|
|
T |
52257539 |
gggaacttctatggtacattcataattttgagtgtattggtactcttgtttca |
52257487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 45629513 - 45629463
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||| ||||||||| ||| ||||||||||||||||||| |||| |||||| |
|
|
T |
45629513 |
aacttttatggtacattcataattttgagtgtaccggtattcttgtttcac |
45629463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 51282338 - 51282289
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||| ||||||| |||||||| |||||||||||||||||| |||| |
|
|
T |
51282338 |
aacttctacggtacacccacaatttaaagtgtaccggtactcttacttca |
51282289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 56017196 - 56017147
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||| | ||||| ||||||||||||| ||| ||||||||||||||||| |
|
|
T |
56017196 |
ataggggatttctacggtacactcacaaattttagtgtaccggtactctt |
56017147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 1792227 - 1792191
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
1792227 |
ttctatggtacactcaatattttgagtgtaccggtac |
1792191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 39103939 - 39103903
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
39103939 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
39103903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 40439035 - 40438999
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
40439035 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
40438999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 53973857 - 53973821
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
53973857 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
53973821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 49950924 - 49950977
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
49950924 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
49950977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 52782158 - 52782212
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
52782158 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
52782212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 36019415 - 36019468
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
36019415 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
36019468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 51235928 - 51235875
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
51235928 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
51235875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 14460594 - 14460538
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
14460594 |
atagggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcac |
14460538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 35352191 - 35352243
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
35352191 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
35352243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 32720394 - 32720340
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
32720394 |
agggaacttctatggtacactcacaattttgagtgtatcggtactcttgtttcac |
32720340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 35320360 - 35320406
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35320360 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
35320406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 33830937 - 33830885
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
33830937 |
gggaacttctatggtacactcacaattttgagtgtactggtactcttgtttca |
33830885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 44500133 - 44500188
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
44500133 |
tagggaaattctatggtacactcacaattttgagtgtaccagtactcttgtttcac |
44500188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 45927632 - 45927581
Alignment:
Q |
124 |
aaatagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
T |
45927632 |
aaatagggaacttctatggtacactcataattttgagtgtatcggtactctt |
45927581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 48388757 - 48388812
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
48388757 |
taggaaacttctatggtacactcacaattttgagtgtactggtactcttgtttcac |
48388812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 50465880 - 50465833
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
50465880 |
agggaacttctatggtacactcacaattttgagtgtaccggtattctt |
50465833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 44963011 - 44962965
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
44963011 |
gggaacttctatggtacactcacaattttaagtgtaccggtactctt |
44962965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 53376997 - 53376951
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
53376997 |
gggaacttctatggtacactcacaattttgaatgtaccggtactctt |
53376951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 37567625 - 37567572
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||| |||||||||| |||||| |
|
|
T |
37567625 |
gggaacttctatggtacactcataattttgagtgtatcggtactcttgtttcac |
37567572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 48925411 - 48925463
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
48925411 |
gggaatttctatggtacactcacaattttgagtgtactggtactcttgtttca |
48925463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 2668033 - 2667986
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
T |
2668033 |
agggaacttctacggtacactcgcaattttgagtgtaccggtactctt |
2667986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 53186408 - 53186358
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
T |
53186408 |
aacttctatggtacactcacaattttgagtgtgctggtactcttgtttcac |
53186358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 9322429 - 9322482
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||| |||||||||||||||| || ||||||||| |||||| |
|
|
T |
9322429 |
gggaacttctatggtaccctcacaattttgagtggactggtactcttgtttcac |
9322482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 48990696 - 48990655
Alignment:
Q |
134 |
cttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
48990696 |
cttctatggtacactcacaattttgagtgcaccggtactctt |
48990655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 55365380 - 55365427
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||| ||||| ||||||||| |||||| |
|
|
T |
55365380 |
ttctatggtacactcacaattttgaatgtactggtactcttgtttcac |
55365427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 347098 - 347056
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggta |
170 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||| |||| |
|
|
T |
347098 |
agggaacttctatggtacactcataattttgagtgtactggta |
347056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 26409629 - 26409683
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||| |||||||||| || ||| ||||||||||||||||| |||||| |
|
|
T |
26409629 |
agggaacttctacggtacactcagaaattttagtgtaccggtactcttgtttcac |
26409683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 7157037 - 7157084
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||| || || |||||||||||||||||||||||| |
|
|
T |
7157037 |
agggaacttctatggtgcatccataattttgagtgtaccggtactctt |
7157084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 54009314 - 54009267
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||| |||||||||||| || |||||||||||||||||||||||| |
|
|
T |
54009314 |
agggaatttctatggtacatccataattttgagtgtaccggtactctt |
54009267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 50560364 - 50560414
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||| |||||||||| |||||| ||| |||||| |||||| |
|
|
T |
50560364 |
aacttctatggtacagtcacaattttaagtgtatcgggactcttgtttcac |
50560414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 26001201 - 26001237
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
26001201 |
ttctatggtacactcaatattttgagtgtaccggtac |
26001237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 3062303 - 3062247
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
3062303 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
3062247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 9915566 - 9915512
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
9915566 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
9915512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 9923478 - 9923424
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
9923478 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
9923424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 42039710 - 42039656
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
42039710 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
42039656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 45196803 - 45196857
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
45196803 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
45196857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 1282592 - 1282539
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
1282592 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
1282539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 25867311 - 25867259
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
25867311 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
25867259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 24505536 - 24505478
Alignment:
Q |
123 |
taaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
24505536 |
taaaaagggaacttttatggtacactcacaattttgagtgtaccggtactcttgtttca |
24505478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 32186422 - 32186476
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||| |||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
32186422 |
agggaatttctatagtacactcacaattttgagtgtaccggtactcttgtttcac |
32186476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 42902389 - 42902439
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||| || ||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
42902389 |
aacttatacggtacactcacaattttaagtgtaccggtactcttatttcac |
42902439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 15091074 - 15091022
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
T |
15091074 |
gggaacttttatggtacactcacaattttgagtgta-cggtactgttatttcac |
15091022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 18922983 - 18922930
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
T |
18922983 |
gggaacttctatggtacactcacaattttgagtgtactaatactcttgtttcac |
18922930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 17335146 - 17335098
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||| | ||||||| ||||||||||||||||||||||||||| |
|
|
T |
17335146 |
tagggaacttcaacggtacacccacaattttgagtgtaccggtactctt |
17335098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 47220362 - 47220309
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |
|
|
T |
47220362 |
tagggaacttct--ggtacacttacaattttgagtgtaccggtactcttgtttcac |
47220309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 47068968 - 47069015
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||| || ||||||||||||||||| |||||| |
|
|
T |
47068968 |
ttctatggtacactcacaatcttaagtgtaccggtactcttgtttcac |
47069015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 39444373 - 39444319
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||| ||| | |||||||||||||| ||||||||| |||||| |
|
|
T |
39444373 |
agggaacttctatggtatacttataattttgagtgtactggtactcttgtttcac |
39444319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 41715138 - 41715192
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| |
|
|
T |
41715138 |
agggaatttctacagtacactcacaattttgagtgtaccgatactcttgtttcac |
41715192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 2038092 - 2038141
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||| |||| |||| |
|
|
T |
2038092 |
atagggaacttctatggtacatccacaattttgagtgtacaggtattctt |
2038141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 44963823 - 44963875
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||| |||||||| ||||||||||||||||| |||| |
|
|
T |
44963823 |
gggaacttctatggtacacccacaatttaaggtgtaccggtactcttacttca |
44963875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 48460653 - 48460605
Alignment:
Q |
123 |
taaatagggaacttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||| || |||||||||||||||| || ||||||||||||||||| |
|
|
T |
48460653 |
taaataggtaaattctatggtacactcaaaaatttgagtgtaccggtac |
48460605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 27426830 - 27426783
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||| ||||||||||||| ||||||||||||| | |||||||||||| |
|
|
T |
27426830 |
ttctacggtacactcacaaatttgagtgtaccgattctcttatttcac |
27426783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 40946977 - 40947019
Alignment:
Q |
133 |
acttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||| ||| | |||||||||||||||||||||||||||| |
|
|
T |
40946977 |
acttctatcgtatattcacaattttgagtgtaccggtactctt |
40947019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 21920092 - 21920056
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
21920092 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
21920056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 41311060 - 41311096
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
41311060 |
ttctatggtacactcaacattttgagtgtaccggtac |
41311096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 22)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 28896902 - 28896957
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
28896902 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
28896957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 36835749 - 36835696
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
36835749 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
36835696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 35037869 - 35037817
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
35037869 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
35037817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 14913839 - 14913890
Alignment:
Q |
124 |
aaatagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
14913839 |
aaatagggaacttctatggcacactcacaattttgagtgtaccggtactctt |
14913890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 196066 - 196119
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
T |
196066 |
gggaacttctatggtacactcacaattttgagtgtgccggtactcttgtttcac |
196119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 310903 - 310956
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
T |
310903 |
gggaacttctatggtacactcacaattttgagtgtgccggtactcttgtttcac |
310956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 43182724 - 43182777
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
T |
43182724 |
gggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcac |
43182777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 7223888 - 7223844
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7223888 |
gaacttctatggtacactcacaattttgagtgtaccggtactctt |
7223844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 38627393 - 38627341
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
T |
38627393 |
ggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcac |
38627341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 38971870 - 38971818
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
38971870 |
ggaacttctatagtacactcacaattttgagtgtaccggtactcttgtttcac |
38971818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 39002968 - 39002916
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
39002968 |
ggaacttctatagtacactcacaattttgagtgtaccggtactcttgtttcac |
39002916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 12266073 - 12266117
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
12266073 |
gaacttctatggtacacccacaattttgagtgtaccggtactctt |
12266117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 464655 - 464604
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||| |||| |||||| |
|
|
T |
464655 |
gaacttctatggtacattcacaattttgagtgtaccggtattcttgtttcac |
464604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 21835839 - 21835784
Alignment:
Q |
128 |
agggaacttctatggtacactcacaa-ttttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |
|
|
T |
21835839 |
agggaacttctatggtacactcacaatttttgagtgtaccagtactcttgtttcac |
21835784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 37766300 - 37766355
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||| |
|
|
T |
37766300 |
tagggaacttctatggtacattcacaattttgaatgtactggtactcttgtttcac |
37766355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 1426327 - 1426373
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
1426327 |
gggaaattctatggtacactcacaattttgagtgtactggtactctt |
1426373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 38803844 - 38803795
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||||| | || ||| ||||||||||||||||| |
|
|
T |
38803844 |
atagggaacttctatggtacacttataaattttagtgtaccggtactctt |
38803795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 45393445 - 45393498
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||| |||||||||||||||||||||| ||||| ||||||||| ||||| |
|
|
T |
45393445 |
agggaactgatatggtacactcacaattttgaatgtactggtactcttgtttca |
45393498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 2880329 - 2880293
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
2880329 |
ttctatggtacactcaacattttgagtgtaccggtac |
2880293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 29039610 - 29039666
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||| || |||||||||||||||| || ||| ||||||||| ||||||| |||||| |
|
|
T |
29039610 |
ataggaaatttctatggtacactcagaaattttagtgtaccgatactcttgtttcac |
29039666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 41674490 - 41674526
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
41674490 |
ttctatggtacactcaacattttgagtgtaccggtac |
41674526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 45401542 - 45401502
Alignment:
Q |
142 |
gtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||| |||||| |
|
|
T |
45401542 |
gtacactcacaattttgaatgtaccgctactcttgtttcac |
45401502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 37725959 - 37725905
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
37725959 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
37725905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 40533659 - 40533606
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
40533659 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
40533606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 2316838 - 2316890
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
2316838 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
2316890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 3723941 - 3723993
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
3723941 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
3723993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 28394474 - 28394422
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
28394474 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
28394422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 16814850 - 16814904
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16814850 |
agggaacttctatgatacactcacaattttgagtgtaccggtactcttgtttcac |
16814904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 16854130 - 16854184
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16854130 |
agggaacttctatgatacactcacaattttgagtgtaccggtactcttgtttcac |
16854184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 35292920 - 35292866
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
T |
35292920 |
tagggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttca |
35292866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 5084835 - 5084892
Alignment:
Q |
125 |
aatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
5084835 |
aatagggaacttctatcgtacactcataattttgagtgtaccggtactcttgtttcac |
5084892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 7504019 - 7504068
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
7504019 |
atagggaacttctatggtacacccacaattttgagtgtaccggtactctt |
7504068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 18576300 - 18576353
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
18576300 |
gggaacttttatggtacactcacaattttgagtgtaccggtactcttgtttcac |
18576353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 36947482 - 36947535
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
36947482 |
gggaatttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
36947535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 13568211 - 13568255
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtact |
172 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13568211 |
agggaacttctatggtacactcacaattttgagtgtaccggtact |
13568255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 18008956 - 18009008
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
T |
18008956 |
ggaacttctatggtacacttacaattttgagtgtaccggtactcttgtttcac |
18009008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 10711685 - 10711630
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |
|
|
T |
10711685 |
tagggaacttctattgtacactcacaattttgaatgtaccggtactcttgtttcac |
10711630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 21836690 - 21836639
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
T |
21836690 |
gaacttctatggtacactcacaattttgagtgtaccggtgctcttgtttcac |
21836639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 19636047 - 19635989
Alignment:
Q |
124 |
aaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||||| |||| || |||||| |
|
|
T |
19636047 |
aaatggggaacttctatggtacactcacaattttgagtgtaccgatacttttgtttcac |
19635989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 19834640 - 19834582
Alignment:
Q |
124 |
aaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||||| |||| || |||||| |
|
|
T |
19834640 |
aaatggggaacttctatggtacactcacaattttgagtgtaccgatacttttgtttcac |
19834582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 36049464 - 36049510
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
36049464 |
gggaacttctatggtacattcacaattttgagtgtaccggtactctt |
36049510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 45555786 - 45555736
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
45555786 |
aacttctacggtacactcacaactttgagtgtaccggtactcttatttcac |
45555736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 1860334 - 1860285
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatt |
178 |
Q |
|
|
||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
1860334 |
gggaacttctatgatacacccacaattttgagtgtaccggtactcttatt |
1860285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 39878917 - 39878962
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtact |
172 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
39878917 |
tagggaacttctatggtacattcacaattttgagtgtaccggtact |
39878962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 6657853 - 6657806
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
T |
6657853 |
agggaacttctatggtacacccataattttgagtgtaccggtactctt |
6657806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 41840062 - 41840015
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
T |
41840062 |
agggaacttctatggtacatccataattttgagtgtaccggtactctt |
41840015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 33423741 - 33423784
Alignment:
Q |
138 |
tatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||| ||||||||||||||||||| ||||||||| ||||| |
|
|
T |
33423741 |
tatggtaccctcacaattttgagtgtactggtactcttgtttca |
33423784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 36191968 - 36192013
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtact |
172 |
Q |
|
|
||||||| |||||||||||| | | ||||||||||||||||||||| |
|
|
T |
36191968 |
tagggaatttctatggtacatttataattttgagtgtaccggtact |
36192013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 15362869 - 15362833
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
15362869 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
15362833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 17809429 - 17809393
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
17809429 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
17809393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 33429139 - 33429175
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
33429139 |
ttctatggtacactcaacattttgagtgtaccggtac |
33429175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 10061565 - 10061511
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
10061565 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
10061511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 14131351 - 14131405
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
14131351 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
14131405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 31570972 - 31571024
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
31570972 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
31571024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 43224645 - 43224697
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
43224645 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttttttca |
43224697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 3150183 - 3150238
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
3150183 |
tagggaacttctatggtacactcacaattttgagtgtatcggtactcttgtttcac |
3150238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 49289223 - 49289282
Alignment:
Q |
123 |
taaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
49289223 |
taaaaagggaatttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
49289282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 9222856 - 9222906
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
9222856 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
9222906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 27038947 - 27038897
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
27038947 |
aacttctatggtacactcacaattttgagtgtaccggtactcttctttcac |
27038897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 29171573 - 29171519
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
29171573 |
agggaacttctatcgtacactcacaattttgagtgtaccggtactcttgtttcac |
29171519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 39853367 - 39853313
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
39853367 |
agggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcac |
39853313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 40850429 - 40850375
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
T |
40850429 |
agggaacttctatggtacactcacaattttgagtgtaccggtattcttgtttcac |
40850375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 44647240 - 44647298
Alignment:
Q |
124 |
aaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
T |
44647240 |
aaatagagaacttctatggtagactcacaattttgagtgtaccggtactcttgtttcac |
44647298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 47860754 - 47860808
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
47860754 |
agggaacttctatggtacactcacaattttgagtgtatcggtactcttgtttcac |
47860808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 2684375 - 2684322
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
2684375 |
gggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcac |
2684322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 9259816 - 9259869
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
T |
9259816 |
gggaacttctatggtacactcacaattttgaatgtaccggtactcttgtttcac |
9259869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 50502344 - 50502397
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
T |
50502344 |
gggaacttctatggtacattcacaattttgagtgtaccggtactcttgtttcac |
50502397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 5057607 - 5057560
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
5057607 |
agggaacttctatggtacacccacaattttgagtgtaccggtactctt |
5057560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 33828863 - 33828910
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
33828863 |
agggaacttctatggtacactcacaattttaagtgtaccggtactctt |
33828910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 33839103 - 33839056
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
33839103 |
agggaacttctatggtacactcacaattttaagtgtaccggtactctt |
33839056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 41321414 - 41321359
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
41321414 |
tagggaacttctatggtacactcacaattttgagtgtattggtactcttgtttcac |
41321359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 48868061 - 48868108
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
48868061 |
agggaacttctatgatacactcacaattttgagtgtaccggtactctt |
48868108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 52273717 - 52273772
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||| || |||||| |
|
|
T |
52273717 |
tagggaacttctatggtacactcacaattttgagtgtaccgttacttttgtttcac |
52273772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 37765253 - 37765299
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
37765253 |
gggaacttttatggtacactcacaattttgagtgtaccggtactctt |
37765299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 48481256 - 48481210
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
48481256 |
gggaacttctatggtacacccacaattttgagtgtaccggtactctt |
48481210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 7426660 - 7426713
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||| |||||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
7426660 |
gggaacttctacggtacactcataattttgagtgtaccggtactcttctttcac |
7426713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 52079839 - 52079786
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||| |||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
52079839 |
gggaacttctatgatacactcataattttgagtgtaccggtactcttgtttcac |
52079786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 10635242 - 10635298
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
10635242 |
atagggaatttctatggtacactcacaattttgagtgtgtcggtactcttgtttcac |
10635298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 1658548 - 1658595
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
|||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
T |
1658548 |
agggaacttctatggtacacccacaattttgagtgtaccggtattctt |
1658595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 31015889 - 31015940
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||| ||||||| ||||| |
|
|
T |
31015889 |
ggaacttctatggtacactcacaattttaagtgtaccgatactcttgtttca |
31015940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 14191302 - 14191248
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||| |
|
|
T |
14191302 |
agggaacttctatagtacactcataattttgagtgtacccgtactcttgtttcac |
14191248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 41550148 - 41550200
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||| || ||| ||||||||||||||||| |||||| |
|
|
T |
41550148 |
ggaacttctatggtacactcagaaattttagtgtaccggtactcttgtttcac |
41550200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 17376756 - 17376709
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||| ||||||||||||||||| |||||||| |||||| |
|
|
T |
17376756 |
ttctatggtacacttacaattttgagtgtaccagtactcttgtttcac |
17376709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 27802213 - 27802166
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||| |||||||||||||||||| ||||||||||||||| |||||| |
|
|
T |
27802213 |
ttctatagtacactcacaattttgaatgtaccggtactcttgtttcac |
27802166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 8086052 - 8085999
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||| |||||||| | |||||||||| || |||||| |
|
|
T |
8086052 |
gggaacttctatggtacactcataattttgaatttaccggtacttttgtttcac |
8085999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 51184448 - 51184393
Alignment:
Q |
126 |
atagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||| |||||||| |||| |||||||||||| |||| |
|
|
T |
51184448 |
atagggaacttctatggtacacccacaatttaaggtgtgccggtactcttacttca |
51184393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 20280628 - 20280575
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||| |||||||| | || ||| ||||||||||||||||| |||||| |
|
|
T |
20280628 |
gggaacttctacggtacactaagaaattttagtgtaccggtactcttgtttcac |
20280575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 7122361 - 7122309
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||| |||||| |||||||| |||||||||||||||||| |||| |
|
|
T |
7122361 |
gggaacttctacagtacacccacaatttaaagtgtaccggtactcttacttca |
7122309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 7435519 - 7435555
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
7435519 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
7435555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0493 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0493
Description:
Target: scaffold0493; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 1794 - 1741
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
1794 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
1741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0239 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0239
Description:
Target: scaffold0239; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 15789 - 15736
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
15789 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
15736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 10453693 - 10453634
Alignment:
Q |
123 |
taaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| |
|
|
T |
10453693 |
taaatagggaacttctatggtacactcacaattttgagtgtatcggtacttttgtttcac |
10453634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 16730128 - 16730077
Alignment:
Q |
131 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16730128 |
gaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
16730077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 25684471 - 25684417
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
T |
25684471 |
agggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcac |
25684417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 31236588 - 31236641
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
31236588 |
gggaatttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
31236641 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 32063529 - 32063578
Alignment:
Q |
133 |
acttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
32063529 |
acttctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
32063578 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 43411517 - 43411570
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
T |
43411517 |
gggaacttctatggtacactaacaattttgagtgtaccggtactcttgtttcac |
43411570 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 4095064 - 4095012
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
4095064 |
ggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcac |
4095012 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 8068323 - 8068371
Alignment:
Q |
133 |
acttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
8068323 |
acttctatggtacactcacaattttgagtgtaccggtactcttgtttca |
8068371 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 9530771 - 9530723
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
9530771 |
tagggaacttctatggtacacccacaattttgagtgtaccggtactctt |
9530723 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 28769947 - 28769999
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
T |
28769947 |
ggaacttctatggtacactcacaattttgagtataccggtactcttgtttcac |
28769999 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 42534391 - 42534446
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||| || |||||| |
|
|
T |
42534391 |
tagggaacttctatggtacactcacaattttgagtgtaccgatacttttgtttcac |
42534446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 22798074 - 22798120
Alignment:
Q |
136 |
tctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
22798074 |
tctatggtacactcacaattttgagtgtaccggtactcttgtttcac |
22798120 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 23189066 - 23189120
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |
|
|
T |
23189066 |
agggaacttctatggtacactcacaattttgagtgtaccagtactattgtttcac |
23189120 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 40340836 - 40340783
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
T |
40340836 |
agggaacttttatggtacactcacaattttgagtgtcccggtactcttgtttca |
40340783 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 13588863 - 13588907
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtact |
172 |
Q |
|
|
|||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
13588863 |
agggaacttctatggtacacccacaattttgagtgtaccggtact |
13588907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 39540719 - 39540771
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| || |||| ||||| |
|
|
T |
39540719 |
gggaacttctatggtacactcacaattttgagtgtaccgttattcttgtttca |
39540771 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 41631627 - 41631572
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||||||||||||| | |||||||||||||| ||||||||| |||||| |
|
|
T |
41631627 |
tagggaacttctatggtacacttataattttgagtgtactggtactcttgtttcac |
41631572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 15726333 - 15726279
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||| |
|
|
T |
15726333 |
agggaacttttatggtacattcacatttttgagtgtaccggtactcttgtttcac |
15726279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 2148127 - 2148180
Alignment:
Q |
129 |
gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |
|
|
T |
2148127 |
gggaacttctatggtacactcacaattttaagtgtaatggtactcttgtttcac |
2148180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 19126324 - 19126267
Alignment:
Q |
124 |
aaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttca |
181 |
Q |
|
|
||||| ||||||||||||||||||||| |||||| |||||| |||||||||| ||||| |
|
|
T |
19126324 |
aaataaggaacttctatggtacactcataattttaagtgtaacggtactcttgtttca |
19126267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 3882237 - 3882185
Alignment:
Q |
130 |
ggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||||| |||| ||||||||||||||||| |||||||||| |||||| |
|
|
T |
3882237 |
ggaacttctatgatacattcacaattttgagtgtatcggtactcttgtttcac |
3882185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 22279215 - 22279263
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactctt |
175 |
Q |
|
|
||||||||||| | ||||||| ||||||||||||||||||||||||||| |
|
|
T |
22279215 |
tagggaacttcaacggtacacccacaattttgagtgtaccggtactctt |
22279263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 32624585 - 32624530
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||| |||| ||||| || ||| ||||||||||||||||| |||||| |
|
|
T |
32624585 |
tagggaacttctacggtatactcagaaattttagtgtaccggtactcttgtttcac |
32624530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 37313853 - 37313892
Alignment:
Q |
143 |
tacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
37313853 |
tacactcacaattttgagtgtactggtactcttgtttcac |
37313892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 37962992 - 37963047
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||| ||||||||||||||||||| || || ||||||||||||||||| |||||| |
|
|
T |
37962992 |
taggaaacttctatggtacactcagaaattgtagtgtaccggtactcttgtttcac |
37963047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 2011458 - 2011422
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
2011458 |
ttctatggtacactcaacattttgagtgtaccggtac |
2011422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 5205019 - 5204983
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
5205019 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
5204983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 40756943 - 40756907
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
40756943 |
ttctatggtacactcaaaaatttgagtgtaccggtac |
40756907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 166417 - 166472
Alignment:
Q |
127 |
tagggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
|||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
T |
166417 |
tagggaacttatatggtacattcacaattttgagtgtaccggtactcttgtttcac |
166472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 292027 - 291977
Alignment:
Q |
132 |
aacttctatggtacactcacaattttgagtgtaccggtactcttatttcac |
182 |
Q |
|
|
||||||||||||||||||||||||||||||||| | |||||||| |||||| |
|
|
T |
292027 |
aacttctatggtacactcacaattttgagtgtatcagtactcttgtttcac |
291977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 14011 - 13967
Alignment:
Q |
128 |
agggaacttctatggtacactcacaattttgagtgtaccggtact |
172 |
Q |
|
|
|||||||||||||||||||| || ||||||||||||||||||||| |
|
|
T |
14011 |
agggaacttctatggtacacccataattttgagtgtaccggtact |
13967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 41394 - 41430
Alignment:
Q |
135 |
ttctatggtacactcacaattttgagtgtaccggtac |
171 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |
|
|
T |
41394 |
ttctatggtacactcaacattttgagtgtaccggtac |
41430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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