View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1576_low_18 (Length: 448)
Name: NF1576_low_18
Description: NF1576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1576_low_18 |
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[»] scaffold0383 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 438
Target Start/End: Original strand, 29084037 - 29084473
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
|||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| || |
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|
T |
29084037 |
taattctgttatttcatttctctttgggtagtaaatttttcatatatcttcaaataaactaggaacatctattctattattatttctaaaagtaatacta |
29084136 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||||||||||||||||| |||||||||||||||| |||| |||||||||||||| |||||| |||||||||||||| |||||||| ||||||||| || |
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|
T |
29084137 |
tgatgagaatttgttaatgtataattaacacaataagtgatagaaaatattttatcacctggtatcattaaatttcctattaaaaatctatgttcaagag |
29084236 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||| |
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|
T |
29084237 |
tgagtgtttgatctaatctttgagtatctaaagggtttcctatattaggatgtatttcaaa-tttaatttgacataggctagattaccttcaacaactcc |
29084335 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgt |
400 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||| |||||||| ||||||||||||||| |
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|
T |
29084336 |
gagtattttatcaaccggatatgtgattctattatcctttaatactagttctaccgtagaattcattccttcttaaaaagttgccttaattaaaacttgt |
29084435 |
T |
|
Q |
401 |
attgctccaataagaatatatcatgtcttattcctatg |
438 |
Q |
|
|
|||||||| ||| |||||||| | || |||||||||| |
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|
T |
29084436 |
attgctcctatatgaatatatgttatcatattcctatg |
29084473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 3 - 438
Target Start/End: Complemental strand, 29083551 - 29083112
Alignment:
Q |
3 |
attctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagtatg |
102 |
Q |
|
|
|||||| |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
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|
T |
29083551 |
attctgttatttcatttctctttggatagtaaatttttcctatatcttctaatagactagggacatctattctattattatttctaaaagtaatattatg |
29083452 |
T |
|
Q |
103 |
atgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatagtg |
202 |
Q |
|
|
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| || |||||||| || |||||||| ||||||||| |||| |
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|
T |
29083451 |
ataagaatttgttaatgcataattaacacaataagtgatagaaaatattttatcacctggtttcgttaaattttctattaaaaatctatgttcaagagtg |
29083352 |
T |
|
Q |
203 |
agtgtttgatctaatctttgagtatctaaagggattcc----tatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaact |
298 |
Q |
|
|
|||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||| |
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|
T |
29083351 |
agtgtttgatttaatctttgagtatctaaagggtttcctatatatattaagatgtatttcaaattttaatttgacataggctagattaccttcaacaact |
29083252 |
T |
|
Q |
299 |
ccgagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaactt |
398 |
Q |
|
|
|||||||||| ||||||||| |||||||||| |||||||||||||||| ||| || |||||||| ||||||||||||||| |||||||||||||| |
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|
T |
29083251 |
ttgagtattttaccaaccggatccatgattctatcatcctttaatactagttctactggaaaattaatttcttcttgaaaagttgatttaattaaaactt |
29083152 |
T |
|
Q |
399 |
gtattgctccaataagaatatatcatgtcttattcctatg |
438 |
Q |
|
|
|||||||||| ||| ||||||||||| |||||||| |||| |
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|
T |
29083151 |
gtattgctcctatatgaatatatcatatcttattcttatg |
29083112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 440
Target Start/End: Original strand, 34412346 - 34412776
Alignment:
Q |
10 |
tatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagtatgatgagaa |
109 |
Q |
|
|
|||||||||||||||||| |||||| ||||| ||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||| |
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|
T |
34412346 |
tatttcatttctctttggtcaataaacttttcttatatcttcaaatagactacggacatcaattctattattatttctgaaagtaatactatgatgagaa |
34412445 |
T |
|
Q |
110 |
tttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatagtgagtgttt |
209 |
Q |
|
|
| |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||| || ||||||||| |||||||| || |
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|
T |
34412446 |
tgggttaatgcataattaacacaataagtgatagaaaatattttatcacctggtctcattaaatttccccttaaagatctatgttcaagagtgagtgctt |
34412545 |
T |
|
Q |
210 |
gatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactccgagtatttt |
309 |
Q |
|
|
|||||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
T |
34412546 |
gatctaatctttgaatatataaagggattcttatattatgatgtatttcaaattttagttttacataagctggattaccttcaacaactccgagtatttt |
34412645 |
T |
|
Q |
310 |
atcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgtattgctcca |
409 |
Q |
|
|
||||| ||| | |||||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |
|
|
T |
34412646 |
atcaatcggttctgtgattctatcatcctttaatactagttctaccagagaattaattctttctttaaaagttgctttaattaaaacttgtattgctcgt |
34412745 |
T |
|
Q |
410 |
ataagaatatatcatgtcttattcctatgct |
440 |
Q |
|
|
||| ||||||||| | ||||||||||||||| |
|
|
T |
34412746 |
atatgaatatatcctatcttattcctatgct |
34412776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 34412142 - 34411775
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
||||| || |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| || |
|
|
T |
34412142 |
taattatgttatttcatttctctttggttaataaatttttcctatatcttcaaatagactacggacatctattctattattatttttaaaagtaatacta |
34412043 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||| |
|
|
T |
34412042 |
tgatgtgaatttgttaatgcataattaacacaataagtgatggaaaatattttatcgcctggtctcattaaatttcccctaaaaaatctatgttca---- |
34411947 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
|||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||| ||| |||||||||||| |||||| |
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|
T |
34411946 |
tgagtgcttggtctaatctttgagtatctaaaaggattcttatattaggatgtatttcaaattttagtttgatataggctggattaccttcaataactcc |
34411847 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttc |
372 |
Q |
|
|
|||||||||||||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| |
|
|
T |
34411846 |
gagtattttatcaatatgatatgtgattatatcatcctttaatactagttctaccagagaattaattccttc |
34411775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 32264757 - 32264336
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
|||||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
T |
32264757 |
taattccgttatttcatttctttttggatagtaaatttttcctatgtcttcgaatagactagggacatctattctattattatttctgaaagtaattcta |
32264658 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||| ||||| ||||||||||||||||| |||||| | || |||||||||||||| |||||| ||||||||||||||||||| |||||||| || | || |
|
|
T |
32264657 |
tgatgtgaattcgttaatgcataattaacgcaataagtaatagaaaatattttatctcctggtttcattaaatttcctcttaataatttatgctctagag |
32264558 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
| |||| |||||||| ||||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| || || ||||| || |||||||||||||| |
|
|
T |
32264557 |
taagtgcttgatctagtctttgagtgtctaatgggattcctatgttaggatgtatttcgaattttaatttgacgtacgctaggtttccttcaacaactcc |
32264458 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgt |
400 |
Q |
|
|
|||||||||||||| | || ||| |||||||| || ||||||| ||||| || | ||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
T |
32264457 |
tagtattttatcaactgaatctgtaattctatcatcttttaatattagttctaacggagaattaattccttcttgaaaagtagatttaattaatacttgt |
32264358 |
T |
|
Q |
401 |
attgctccaataagaatatatc |
422 |
Q |
|
|
|| ||||| ||| ||||||||| |
|
|
T |
32264357 |
atagctcctatatgaatatatc |
32264336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 438
Target Start/End: Complemental strand, 34407008 - 34406940
Alignment:
Q |
370 |
ttcttgaaaagttgttttaattaaaacttgtattgctccaataagaatatatcatgtcttattcctatg |
438 |
Q |
|
|
|||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||| | ||||||||||||| |
|
|
T |
34407008 |
ttcttgaaaagttgctttgattaaaacttttattgctcctatatgaatatatcctatcttattcctatg |
34406940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 24964609 - 24964188
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
|||||| | |||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| || |
|
|
T |
24964609 |
taattccgttatttcatttctttttggatagtaaatttttcctatgtcttcgaatagactagggacatctattctattattaattctgaaagtaatacta |
24964510 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||||||||| ||||||||||||||||| |||||| | || |||||||||||||| |||||| |||||||||||||||||||||||||||| || | || |
|
|
T |
24964509 |
tgatgagaattcgttaatgcataattaacgcaataagtaatagaaaatattttatctcctggtttcattaaatttcctcttaaaaatttatgctctagag |
24964410 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
| |||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||| || ||||||||||| |||||||||||||| |
|
|
T |
24964409 |
taagtgcttgatctagtctttgagtgtctaatgggattcctatattaggatgtatttcgaattttaatttaacgtatgctagatttccttcaacaactcc |
24964310 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgt |
400 |
Q |
|
|
|||||||||||||| | |||||| |||||||| || ||||||| ||||| || | ||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
T |
24964309 |
tagtattttatcaactgaatatgtaattctatcatcttttaatattagttctaacggagaattaattccttcttgaaaagtagatttaattaatacttgt |
24964210 |
T |
|
Q |
401 |
attgctccaataagaatatatc |
422 |
Q |
|
|
|| ||||| ||| ||||||||| |
|
|
T |
24964209 |
atagctcctatatgaatatatc |
24964188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 20414329 - 20413908
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
||||||| |||||||||||| ||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |
|
|
T |
20414329 |
taattctattatttcatttctttttggatagtaaatttttccaatgtcttcaaatagactagggacatctattctattattatttctgaaagtaatacta |
20414230 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||||||||| |||||||||||||||||||||||| |||| ||||||||||| || |||| ||||||||| ||||||||||||||| ||||||||| || |
|
|
T |
20414229 |
tgatgagaattcgttaatgcataattaacacaataagtgatagaaaatattttttctcctgatctcattaagtttcctcttaaaaatatatgttcaagag |
20414130 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
| |||| |||||||| |||||| ||||||| || |||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||| |||||||| |
|
|
T |
20414129 |
taagtgcttgatctagcctttgactatctaatggtattcctatattaggatgtatttcatattttaatttgacatatgctagatttccttcgacaactcc |
20414030 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgt |
400 |
Q |
|
|
| || ||||||||| | || ||| |||||||| |||||||||| ||||| || | ||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
T |
20414029 |
taatactttatcaactgaatttgtaattctatcttcctttaatattagttctaacggagaattaattccttcttgaaaagtagctttaattaatacttgt |
20413930 |
T |
|
Q |
401 |
attgctccaataagaatatatc |
422 |
Q |
|
|
|| ||||| ||| ||||||||| |
|
|
T |
20413929 |
atagctcctatatgaatatatc |
20413908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 23926459 - 23926880
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
||||| || |||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |
|
|
T |
23926459 |
taattatgttatttcatttctttttggatagtaaatttttcctatgtcttcaaatagactagggacatctattctattattatttctgaaagtaatacta |
23926558 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||||||||| ||||||||||||||||| |||||| | || |||||||||||||| ||||||||||||||||||||||||||||||||||| || | || |
|
|
T |
23926559 |
tgatgagaattcgttaatgcataattaacgcaataagtaatagaaaatattttatctcctggtctcattaaatttcctcttaaaaatttatgctctagag |
23926658 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
| |||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||| || ||||||||||| |||||||||||||| |
|
|
T |
23926659 |
taagtgcttgatctagtctttgagtgtctaatgggattcctatattaggatgtatttcgaattttaatttaacgtatgctagatttccttcaacaactcc |
23926758 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgt |
400 |
Q |
|
|
|||||||||||||| | || ||| |||||||| || ||||||| ||||| || | ||||||||||||||||||||||||| | ||||||||| |||||| |
|
|
T |
23926759 |
tagtattttatcaactgaatctgtaattctatcatcttttaatattagttctaacggagaattaattccttcttgaaaagtagatttaattaatacttgt |
23926858 |
T |
|
Q |
401 |
attgctccaataagaatatatc |
422 |
Q |
|
|
|| ||||| ||| ||||||||| |
|
|
T |
23926859 |
atagctcctatatgaatatatc |
23926880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 165 - 422
Target Start/End: Complemental strand, 23935976 - 23935719
Alignment:
Q |
165 |
tcattaaatttcctcttaaaaatttatgttcaatagtgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattt |
264 |
Q |
|
|
|||||||||||||||||||||||||||| || | ||| |||| |||||||| ||||||||| ||||| | |||||||||||||||||||||||| ||||| |
|
|
T |
23935976 |
tcattaaatttcctcttaaaaatttatgctctagagtaagtgcttgatctagtctttgagtgtctaatgtgattcctatattaggatgtatttcgaattt |
23935877 |
T |
|
Q |
265 |
tagttttacatatgctagattaccttcaacaactccgagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaatta |
364 |
Q |
|
|
|| ||| || ||||||||||| |||||||||||||| |||||||||||||| | || ||| |||||||| || ||||||| ||||| || | |||||||| |
|
|
T |
23935876 |
taatttaacgtatgctagatttccttcaacaactcctagtattttatcaactgaatttgtaattctatcatcttttaatattagttctaacggagaatta |
23935777 |
T |
|
Q |
365 |
attccttcttgaaaagttgttttaattaaaacttgtattgctccaataagaatatatc |
422 |
Q |
|
|
||||||||||||||||| | ||||||||| |||||||| ||||| ||| ||||||||| |
|
|
T |
23935776 |
attccttcttgaaaagtagatttaattaatacttgtatagctcctatatgaatatatc |
23935719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 27362055 - 27361634
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
|||||| | |||||||||||| ||||| || ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| |||||||| || |
|
|
T |
27362055 |
taattccgttatttcatttctttttggatagtaaatttttccgatgtcttcgaatagaccatggacatctattctattattatttctgaaagtaatgcta |
27361956 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||| ||||| ||||||||||||||||| |||||| | || |||||||||||||| || ||| ||||||||||||||||||| |||||||| || | || |
|
|
T |
27361955 |
tgatgtgaattcgttaatgcataattaacgcaataagtaatagaaaatattttatctccgggtttcattaaatttcctcttaagaatttatgctctagag |
27361856 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
| |||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| || |||||||| || |||||||||||||| |
|
|
T |
27361855 |
taagtgcttgatctagtctttgagtgtctaatgggattcctatattaggatgtatttcaaattttaatttaacgtatgctaggtttccttcaacaactcc |
27361756 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaattaattccttcttgaaaagttgttttaattaaaacttgt |
400 |
Q |
|
|
|||||||||||||| | || ||| |||||||| || ||||||| ||||| || | ||||||||| ||||||||||||||| | ||||||||| |||||| |
|
|
T |
27361755 |
tagtattttatcaactgaatctgtaattctatcatcttttaatattagttctaacggagaattaactccttcttgaaaagtagatttaattaatacttgt |
27361656 |
T |
|
Q |
401 |
attgctccaataagaatatatc |
422 |
Q |
|
|
|| ||||| ||| ||||||||| |
|
|
T |
27361655 |
atagctcctatatgaatatatc |
27361634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 22240348 - 22240697
Alignment:
Q |
1 |
taattctgctatttcatttctctttgggtaataaatttttcctatatcttcgaatagactagggacatctattctattattatttctaaaagtaatagta |
100 |
Q |
|
|
|||||||| |||||||||||| ||||| || |||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| || |
|
|
T |
22240348 |
taattctgttatttcatttctttttggatagtaaatttttcctatgtcttcaaatcgactagggacatcaattctattattatttctgaaagtaatacta |
22240447 |
T |
|
Q |
101 |
tgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtctcattaaatttcctcttaaaaatttatgttcaatag |
200 |
Q |
|
|
||||||||||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||||| || |
|
|
T |
22240448 |
tgatgagaattcgttaatgcataattaacacaataagtgatagaaaatattttgtctcctggtctcattaagtttcctcttaaaaatttatgttcaagag |
22240547 |
T |
|
Q |
201 |
tgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattttagttttacatatgctagattaccttcaacaactcc |
300 |
Q |
|
|
| |||| |||||||| ||||||||||||||| | |||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||| |||||||| |
|
|
T |
22240548 |
taagtgcttgatctagtctttgagtatctaatgatattcctatattaggatgtatttcatattttaatttgacatatgctagatttccttcgacaactcc |
22240647 |
T |
|
Q |
301 |
gagtattttatcaaccggatatgtgattctatcgtcctttaatactagtt |
350 |
Q |
|
|
|||| ||||||| | | || ||| |||||||| |||||||||| ||||| |
|
|
T |
22240648 |
tagtactttatcagctgaatttgtaattctatcatcctttaatattagtt |
22240697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0383 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0383
Description:
Target: scaffold0383; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 65 - 422
Target Start/End: Original strand, 12474 - 12831
Alignment:
Q |
65 |
acatctattctattattatttctaaaagtaatagtatgatgagaatttgttaatgcataattaacacaataaatgatcgaaaatattttatcgcctggtc |
164 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | |||||| | || |||||||||||||| |||||| |
|
|
T |
12474 |
acatctattctattattatttctaaaagtaatactatgatgagaattcgttaatgcataattagcgcaataagtaatagaaaatattttatctcctggtt |
12573 |
T |
|
Q |
165 |
tcattaaatttcctcttaaaaatttatgttcaatagtgagtgtttgatctaatctttgagtatctaaagggattcctatattaggatgtatttcaaattt |
264 |
Q |
|
|
|||||||||||||||||||||||||||| || | ||| || |||||||||| ||||||||| ||||| | |||||||||||||||||||||||| ||||| |
|
|
T |
12574 |
tcattaaatttcctcttaaaaatttatgctctagagtaagggtttgatctagtctttgagtgtctaatgagattcctatattaggatgtatttcgaattt |
12673 |
T |
|
Q |
265 |
tagttttacatatgctagattaccttcaacaactccgagtattttatcaaccggatatgtgattctatcgtcctttaatactagttgtaccagagaatta |
364 |
Q |
|
|
|| ||| || ||||||||||| |||||||||||||| |||||||||||||| | || ||| |||||||| || ||||||| ||||| || | |||||||| |
|
|
T |
12674 |
taatttaacgtatgctagatttccttcaacaactcctagtattttatcaactgaatctgtaattctatcatcttttaatattagttctaacggagaatta |
12773 |
T |
|
Q |
365 |
attccttcttgaaaagttgttttaattaaaacttgtattgctccaataagaatatatc |
422 |
Q |
|
|
||||||||||||||||| | ||||||||| |||||||| ||||| ||| ||||||||| |
|
|
T |
12774 |
attccttcttgaaaagtagatttaattaatacttgtatagctcctatatgaatatatc |
12831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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