View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1576_low_39 (Length: 302)
Name: NF1576_low_39
Description: NF1576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1576_low_39 |
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[»] scaffold0400 (2 HSPs) |
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[»] scaffold0365 (2 HSPs) |
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[»] scaffold0289 (2 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 15011465 - 15011193
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
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|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
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T |
15011465 |
gcttcgattatgttctcatacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtacaggcttgtattcttttgtgc |
15011366 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
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|||||||| |||| |||| |||||| |||||||| |||||| ||||||||| || || ||||||||||||| || ||||||| |||||||||| ||||| |
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|
T |
15011365 |
ttgaagttcgacacaaaaggtatgagatcccataaacaattaatgctaacagtagagggcctagagtgagggatagaactagcaccaaaattttgttagt |
15011266 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
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|||||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| |
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T |
15011265 |
cttatgataatgaaatttgccaccagatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15011193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 15017580 - 15017312
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
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|
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
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T |
15017580 |
gcttcgattatgttctcatacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgtattcttctgtgc |
15017481 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
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|||||||| ||||||||| |||||| |||||||| |||||| ||||||||| || |||||||||||||| | || ||||||| || ||||||| || || |
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T |
15017480 |
ttgaagttcgacaaaaaaagtatgagatcccataaacaattaatgctaacagtagaggacctagagtgagtgatagaactagcacccaaattttgtttgt |
15017381 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcc |
288 |
Q |
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||||||||||||||| |||||||||||| |||||||||||| || ||||||| ||||||||||||||| |
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|
T |
15017380 |
cttatgattatgaaacttgccaccagatattgagcaaggctctaggccagagatattaccacacaagcc |
15017312 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 15037484 - 15037213
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
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|
T |
15037484 |
gcttcgataatgttctcatacaccattttgccatcaaagctccatatttcaaatagattttcaatttgaaattcttgtgctggcttgtgttcttttgtgc |
15037385 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
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|||||||| ||| ||| | |||||| |||||||| ||||| |||||||||| || || || |||||||||| || ||||||| |||||||||| ||||| |
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T |
15037384 |
ttgaagttcgac-aaagaggtatgagatcccataaacaatcaatgctaacaatagagggccgagagtgagggatagaactagcaccaaaattttgttagt |
15037286 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
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|||||| |||||||| ||||||| |||||||||||||||| || ||||||||||||||||| ||||||||| |
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T |
15037285 |
attatgactatgaaaggtgccacccgatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15037213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 15002572 - 15002300
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
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T |
15002572 |
gcttcgattatgttctcgtacaccatttttccatcaaagctccatatttcaaatagattttcaattttcaattcttgtgcaggcttgtattcttttgtgc |
15002473 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
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|||||||| ||||||||| |||||| |||||||| ||||| |||||||||| || || || |||||||||| || ||||||| |||||||||| ||||| |
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T |
15002472 |
ttgaagttcgacaaaaaaggtatgagatcccataaacaatcaatgctaacaatagagggccgagagtgagggatagaactagcaccaaaattttgttagt |
15002373 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
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|||||| |||||||| ||||||| |||||||||||||||| || ||||| ||||||||||||||||||||| |
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T |
15002372 |
attatgactatgaaaggtgccacccgatgttgagcaaggctctaggccagaaacattaccacacaagcctttg |
15002300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 15032917 - 15032651
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || |
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T |
15032917 |
gcttcgattatgttctcgtacaccattttgccatcaaagctccatatttcaaacagattttcaatttgaaattcttgtgcaggcttgtattcttttgcgc |
15032818 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
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||||| || |||| |||| |||||| ||| |||||| ||||||||| || || ||||||||||||| || ||||||| |||||||||| ||||| |
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T |
15032817 |
ttgaaattcgacacaaaaggtatgagatc------acaattaatgctaacagtagagggcctagagtgagggatagaactagcaccaaaattttgttagt |
15032724 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| |
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|
T |
15032723 |
cttatgattatgaaatttgccaccagatgttgagcaaggctctaggccagagacattaccacataagcctttg |
15032651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 20 - 292
Target Start/End: Original strand, 14532392 - 14532664
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||||||| |||| ||||||||||| || ||||||||||||||| |||||||||||||| |||||||||||| ||| | |||| ||||||||||| |
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|
T |
14532392 |
gcttcgataatggtctcgtacaccatttttccatcaaagctccatattgcaaatagattttcagtttgaaattcttctgcgtggttgtcttcttttgtgc |
14532491 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
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|||||||||||||||||| |||||| ||||| || ||| |||| ||||| || | ||||||||||||||||||||||||| ||||||| || |||| |
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|
T |
14532492 |
ttgaagtttgacaaaaaaggtatgagatcccgtaagcaaaaaatgccaacaatagagtacctagagtgaggggtaaaactagcaccaaaatattgctagt |
14532591 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
||||||| |||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||||| |
|
|
T |
14532592 |
cttatgactatgaaagttgccacctgatgttgagcaacacactaggccagagacattaccacacaagcctttg |
14532664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 292
Target Start/End: Original strand, 14522271 - 14522543
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||| || ||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||||||||| | || |||||| ||||||||||| |
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|
T |
14522271 |
gcttcgatgatattctcatacaccatttttccatcaaagctccatattgtaaatagattttcagtttgaaattcttctacatgcttgtcttcttttgtgc |
14522370 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
|
|
||||||| |||||| |||||| |||||||| |||| | |||||||||| | || ||||||||||||| |||||||||| |||||||||| ||||| |
|
|
T |
14522371 |
ttgaagtgcaacaaaattggtatgagatcccataaacaaataatgctaacaataaagggcctagagtgagggataaaactagcaccaaaattttgttagt |
14522470 |
T |
|
Q |
220 |
cttatgattatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
|||||| |||| ||||| ||||| |||||||||||||||| || |||||||||||||| |||||||||||| |
|
|
T |
14522471 |
tttatgactatggaagtttccacctgatgttgagcaaggctctaggccagagacattaccgcacaagcctttg |
14522543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 15041001 - 15040937
Alignment:
Q |
228 |
tatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
T |
15041001 |
tatgaaagttgccaccagatgttgagcaatgctctaggccagagacattaccacacaagcctttg |
15040937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 14483216 - 14483154
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttca |
82 |
Q |
|
|
||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||||||| |
|
|
T |
14483216 |
gcttcgataatgttctcgtacaccatttttcaatcaaaactccatattgaaaatagattttca |
14483154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 14504432 - 14504340
Alignment:
Q |
35 |
tcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtt |
127 |
Q |
|
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|||||||||||||| || ||||| ||||||||| ||||||||||||| | || |||||| |||| |||| |||||||||| | |||||| |
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|
T |
14504432 |
tcatacaccatttttccatcaaaactccatattgaaaatagattttcagtgtgtgattcttctgcaaccttggattcttttgtgttcgaagtt |
14504340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 13253 - 12972
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||| ||||||||||| |||||||| || |||||||||||| || |||| ||||||||| |||||||||||| || |||||||| ||||||| | | |
|
|
T |
13253 |
gcttcgattatgttctcatataccatttttccatcaaagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgtattctttttttc |
13154 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
|
|
||||||| || | |||| |||||| | |||||| |||| | |||||||||| || | || |||||||||||||||||||| ||||||||||| ||||| |
|
|
T |
13153 |
ttgaagtgtggtagaaaaggtatgagaacccataaacaaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaaaattttgttagt |
13054 |
T |
|
Q |
220 |
cttatga---------ttatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
13053 |
cttatgactatgaaagttatgaaagtttccacctgatgttgagcaaggctctagaccagagacattaccacacaagcctttg |
12972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 292
Target Start/End: Complemental strand, 6945 - 6684
Alignment:
Q |
28 |
aatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtt |
127 |
Q |
|
|
||||||||||||||||| ||| || ||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
T |
6945 |
aatgttctcatacaccaattttccatcaaagctccatattgcaaatagattttcagtttgaaattctcctgcagtcttgtattcttttgtgcttgaagtt |
6846 |
T |
|
Q |
128 |
tgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgat |
227 |
Q |
|
|
|||| |||| | |||| | ||||| | || | ||||| |||| || | |||||||||| ||||||||| | | ||||||| | |||||||||||| |
|
|
T |
6845 |
cgacataaaaggcatgagaggccataaagaaataatgctgacaatagagtgcctagagtgatgggtaaaacaaccaccaaaatgtgtttagtcttatgac |
6746 |
T |
|
Q |
228 |
tatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
|||||||||| ||||| ||||||||||||||| | |||||| |||||||||||||||||| |
|
|
T |
6745 |
tatgaaagttaccacctaatgttgagcaaggctctaagccagag---ttaccacacaagcctttg |
6684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 13896 - 13615
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
|||||||| ||||||||||| |||||||| || |||||||||||| || |||| ||||||||| |||||||||||| || |||||||| ||||||| | | |
|
|
T |
13896 |
gcttcgattatgttctcatataccatttttccatcaaagctccatgttgcaaagagattttcagtttgaaattcttctgtaggcttgtattctttttttc |
13797 |
T |
|
Q |
120 |
ttgaagtttgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagt |
219 |
Q |
|
|
||||||| || | |||| |||||| | |||||| |||| | |||||||||| || | || |||||||||||||||||||| ||||||||||| ||||| |
|
|
T |
13796 |
ttgaagtgtggtagaaaaggtatgagaacccataaacaaataatgctaacaatagagttccaagagtgaggggtaaaactagatccaaaattttgttagt |
13697 |
T |
|
Q |
220 |
cttatga---------ttatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
13696 |
cttatgactatgaaagttatgaaagtttccacctgatgttgagcaaggctctagaccagagacattaccacacaagcctttg |
13615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 292
Target Start/End: Complemental strand, 7589 - 7328
Alignment:
Q |
28 |
aatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgcttgaagtt |
127 |
Q |
|
|
||||||||||||||||| ||| || ||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
T |
7589 |
aatgttctcatacaccaattttccatcaaagctccatattgcaaatagattttcagtttgaaattctcctgcagtcttgtattcttttgtgcttgaagtt |
7490 |
T |
|
Q |
128 |
tgacaaaaaatgtatgatatcccatatacaattgatgctaacaaaagtggacctagagtgaggggtaaaactagctccaaaattttattagtcttatgat |
227 |
Q |
|
|
|||| |||| | |||| | ||||| | || | ||||| |||| || | |||||||||| ||||||||| | | ||||||| | |||||||||||| |
|
|
T |
7489 |
cgacataaaaggcatgagaggccataaagaaataatgctgacaatagagtgcctagagtgatgggtaaaacaaccaccaaaatgtgtttagtcttatgac |
7390 |
T |
|
Q |
228 |
tatgaaagttgccaccagatgttgagcaaggctgcagaccagagacattaccacacaagcctttg |
292 |
Q |
|
|
|||||||||| ||||| ||||||||||||||| | |||||| |||||||||||||||||| |
|
|
T |
7389 |
tatgaaagttaccacctaatgttgagcaaggctctaagccagag---ttaccacacaagcctttg |
7328 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 17027354 - 17027247
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||| ||| ||||||||| || || ||||||| ||||||||| |
|
|
T |
17027354 |
gcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggcttgtattcttttgtca |
17027255 |
T |
|
Q |
120 |
ttgaagtt |
127 |
Q |
|
|
|||||||| |
|
|
T |
17027254 |
ttgaagtt |
17027247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 17557846 - 17557739
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagattttcaatttgaaattcttgtgcaggcttgttttcttttgtgc |
119 |
Q |
|
|
||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||| ||| ||||||||| || || ||||||| ||||||||| |
|
|
T |
17557846 |
gcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaatagattatcagtttgaaattattctgtcggcttgtattcttttgtca |
17557747 |
T |
|
Q |
120 |
ttgaagtt |
127 |
Q |
|
|
|||||||| |
|
|
T |
17557746 |
ttgaagtt |
17557739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 15664889 - 15664949
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagatttt |
80 |
Q |
|
|
||||| ||||||||||||||||||||||| || ||||| ||||||||| ||||| ||||| |
|
|
T |
15664889 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
15664949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 15676723 - 15676783
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatatttcaaatagatttt |
80 |
Q |
|
|
||||| || |||||||||||||||||||| || ||||| ||||||||| ||||| ||||| |
|
|
T |
15676723 |
gcttcaattatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttt |
15676783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 5215 - 5261
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatat |
66 |
Q |
|
|
||||| ||||||||||||||||||||||| || ||||| |||||||| |
|
|
T |
5215 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatat |
5261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 14048 - 14094
Alignment:
Q |
20 |
gcttcgataatgttctcatacaccattttgccgtcaaagctccatat |
66 |
Q |
|
|
||||| ||||||||||||||||||||||| || ||||| |||||||| |
|
|
T |
14048 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatat |
14094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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